| Clone Name | FLbaf108n08 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os06g51480:12006.t04831:unspliced-genomic expressed protein| Length = 3063 Score = 72.5 bits (152), Expect(6) = 1e-51 Identities = 28/42 (66%), Positives = 34/42 (80%) Frame = +3 / +2 Query: 441 QYLPYDRTGELQNLVSFVNNNLDLCQWAALATFATQVLSLFL 566 Q LPYDRTGEL NL+SF+ NLDLC+WAALA ATQV ++ + Sbjct: 749 QDLPYDRTGELDNLLSFIQTNLDLCKWAALAIVATQVTNIII 874 Score = 72.1 bits (151), Expect(6) = 1e-51 Identities = 34/63 (53%), Positives = 39/63 (61%) Frame = +1 / +1 Query: 547 RYSRFSWR*FYEPGFHPRAATMTTMKILWS*GSRCLLPKALHPISLPRLTPKASIRTYGA 726 R+ FSW+ Y+P F PR TMT MKILWS*G LPK L I LP + SI+TYGA Sbjct: 958 RHFHFSWQPSYDPCFLPRVPTMTVMKILWS*GGHFWLPKVLPLIFLPPPILEVSIQTYGA 1137 Query: 727 HR* 735 * Sbjct: 1138 QE* 1146 Score = 51.0 bits (105), Expect(6) = 1e-51 Identities = 22/44 (50%), Positives = 28/44 (63%) Frame = +3 / +1 Query: 264 FACAVMAAGLLYCAILLAVYIAAEFSSGCCFYFYTGLASVMILL 395 F CA+MAAGL YC +LLA +AAE +S C F AS+ + L Sbjct: 376 FVCALMAAGLFYCLLLLAGCVAAEINSPCFLCFVLASASLSLSL 507 Score = 45.5 bits (93), Expect(6) = 1e-51 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +3 / +2 Query: 210 RWARHHELHIHHLLPDLWF 266 RWARHH LH+ LLPDLW+ Sbjct: 224 RWARHHHLHLQDLLPDLWY 280 Score = 36.3 bits (73), Expect(6) = 1e-51 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = +2 / +3 Query: 758 LTGLHLQHTGSKCSATTVRS 817 L LHLQHTGSKC+ T+V S Sbjct: 2256 LKQLHLQHTGSKCTTTSVSS 2315 Score = 35.0 bits (70), Expect(6) = 1e-51 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +3 / +2 Query: 84 GRSEKNGGGCGPCCLRFLLKLLAFPQ 161 GR+ ++ GG CCL FL K LAF Q Sbjct: 98 GRARRSAGGGLHCCLAFLFKFLAFLQ 175 Score = 118 bits (253), Expect(4) = 6e-35 Identities = 48/69 (69%), Positives = 58/69 (84%) Frame = +3 / +3 Query: 537 FATQVLSLFLAMILRAWVSPTSSDYDNNEDFVVIRKPLLIAQGAPSYLPTTADPKGVHPN 716 F TQ LSL LA ILR+ +S S+DYD++EDFVVIR+PLL+AQGAP+YLPTTAD +G HP+ Sbjct: 948 FFTQALSLLLATILRSMLSTPSADYDSDEDFVVIRRPLLVAQGAPAYLPTTADTRGFHPD 1127 Query: 717 LWSSSMRQK 743 LWSS MR K Sbjct: 1128 LWSSRMRHK 1154 Score = 41.4 bits (84), Expect(4) = 6e-35 Identities = 16/31 (51%), Positives = 23/31 (74%) Frame = +3 / +2 Query: 363 YTGLASVMILLEEAVAHNILLNEHWIQYLPY 455 YT LA VM+LLE A+A ++ N+HWIQ + + Sbjct: 596 YTILAVVMMLLEAALAADLFFNKHWIQVISF 688 Score = 33.1 bits (66), Expect(4) = 6e-35 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +3 / +1 Query: 756 SSRDYTYNTLDQNAVRPQ*EA 818 +S +YTYNTLD NA PQ* A Sbjct: 2254 NSSNYTYNTLDPNAPPPQ*AA 2316 Score = 23.1 bits (44), Expect(4) = 6e-35 Identities = 10/29 (34%), Positives = 12/29 (41%) Frame = +3 / +2 Query: 36 SEPKPKSPNPQAMAGGGRSEKNGGGCGPC 122 S+ P P PQ+ G GGG C Sbjct: 53 SKSSPPPPPPQSWVMGRARRSAGGGLHCC 139 Score = 70.3 bits (147), Expect(5) = 5e-31 Identities = 34/62 (54%), Positives = 41/62 (66%) Frame = -1 / -2 Query: 743 LLPHR*AP*VRMDAFGVSRGREIGWSALGNKQRLPYDHKIFIVVIVAARG*NPGS*NHRQ 564 L+ H *AP*V M+ + GR+I S LGN++ PYDHKIFI VIV RG GS*+ Q Sbjct: 1154 LVSHS*AP*VWMETSSIGGGRKISGSTLGNQKWPPYDHKIFITVIVGTRGRKHGS*DGCQ 975 Query: 563 EK 558 EK Sbjct: 974 EK 969 Score = 54.7 bits (113), Expect(5) = 5e-31 Identities = 24/35 (68%), Positives = 28/35 (80%) Frame = -2 / -1 Query: 550 TWVAKVARAAHWQRSRLLLTKETRFWSSPVRSYGR 446 T VA +ARAAH QRSRL+ KE+R SSPVRSYG+ Sbjct: 858 TCVATIARAAHLQRSRLVWMKESRLSSSPVRSYGK 754 Score = 39.1 bits (79), Expect(5) = 5e-31 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = -3 / -3 Query: 861 KAMHGLPSSSPVAQKLLTVVALHFDPVCCRC 769 KA + S+ ++ LLT V +H DPVCCRC Sbjct: 2359 KACFFIISNIIISHTLLTEVVVHLDPVCCRC 2267 Score = 30.4 bits (60), Expect(5) = 5e-31 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -2 / -1 Query: 442 WIQCSLRRMLWATASSSRIITDAKPV 365 WIQC L+ A A+S IIT AK V Sbjct: 675 WIQCLLKNKSAARAASRSIITTAKMV 598 Score = 28.1 bits (55), Expect(5) = 5e-31 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = -1 / -1 Query: 314 EEDGAVEEAGGHDGA 270 EE AVEEAG H+GA Sbjct: 426 EEKQAVEEAGSHEGA 382 Score = 67.0 bits (140), Expect(2) = 4e-12 Identities = 35/67 (52%), Positives = 40/67 (59%) Frame = +2 / +2 Query: 542 HPGTLAFLGDDSTSLGFTHEQRL*QQ*RFCGHKEAAAYCPRRSILSPYHG*PQRRPSEPM 721 + GT G+ T F E RL*Q *RFCGHKEA + CPR S LS YH R PS PM Sbjct: 953 YTGTFTSPGNHLTIHAFYPECRL*Q**RFCGHKEATSGCPRCSRLSSYHRRY*RFPSRPM 1132 Query: 722 ELIDEAE 742 EL +E + Sbjct: 1133 ELKNETQ 1153 Score = 29.9 bits (59), Expect(2) = 4e-12 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +1 / +2 Query: 766 TTPTTHWIKMQCDHSEKLLCD 828 TTPTTHWI+M S++ + D Sbjct: 2264 TTPTTHWIQMHHHLSKQRVTD 2326 Score = 70.3 bits (147), Expect(2) = 5e-12 Identities = 30/38 (78%), Positives = 30/38 (78%) Frame = -2 / -3 Query: 739 CLIDELHRFGWTPLGSAVVGR*DGAPWAISSGFLMTTK 626 CLI ELHR GW PL SAVVGR* GAPWA SG LMTTK Sbjct: 1150 CLILELHRSGWKPLVSAVVGR*AGAPWATRSGLLMTTK 1037 Score = 26.3 bits (51), Expect(2) = 5e-12 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = -1 / -1 Query: 797 CILIQCVVGVV 765 CI IQCVVGVV Sbjct: 2295 CIWIQCVVGVV 2263 Score = 58.8 bits (122), Expect = 8e-08 Identities = 29/55 (52%), Positives = 34/55 (61%) Frame = -3 / -1 Query: 711 DGRLWGQPW*GDRMERLGQ*AAASL*PQNLHCCHSRCSWVKPRLVESSPRKARVP 547 DG L + W* D+ E LGQ ASL*PQNLH CHSR S K +V P + +VP Sbjct: 1122 DGNL*YRRW*EDKREHLGQPEVASL*PQNLHHCHSRHSG*KAWIVRWLPGEVKVP 958
>LOC_Os11g09670:12011.t00859:unspliced-genomic F-box domain containing protein, expressed| Length = 2255 Score = 38.6 bits (78), Expect = 0.088 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -3 / -3 Query: 612 HSRCSWVKPRLVESSPRKARVPGWQRWREQ 523 +S CS+ PRL+ SSP ++ V +QRWR++ Sbjct: 471 NSCCSFTLPRLLSSSPTRSPVADFQRWRQR 382
>LOC_Os05g16430:12005.t01413:unspliced-genomic SHR5-receptor-like kinase, putative| Length = 6446 Score = 38.2 bits (77), Expect = 0.12 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +3 / +3 Query: 588 VSPTSSDYDNNEDFVVIRKPLLIAQGAPSYLP 683 V P+ D++NNE F VIR LL QG+P P Sbjct: 6162 VDPSLKDFNNNEAFRVIRVALLCTQGSPHQRP 6257
>LOC_Os02g12170:12002.t01015:unspliced-genomic hypothetical protein| Length = 1281 Score = 30.9 bits (61), Expect(2) = 0.58 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +3 / -2 Query: 480 LVSFVNNNLDLCQWAALATFATQVLSLFLAMILR 581 L SF + + C W A F T V+S+ A ILR Sbjct: 857 LTSFASEIIKYCLWCLTANFTTFVVSVGKAKILR 756 Score = 26.3 bits (51), Expect(2) = 0.58 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +3 / -2 Query: 36 SEPKPKSPNPQAMAGGGRSEKNGGGCG 116 S P P P+P+ G G S G G G Sbjct: 992 SPPAPPPPSPRVRFGNGESGCGGRGDG 912
>LOC_Os07g36520:12007.t03322:unspliced-genomic F-box domain containing protein| Length = 2925 Score = 35.4 bits (71), Expect = 0.81 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = +3 / -3 Query: 21 CFLFSSEPKPKSPNPQAMAGGGRSEKNGGGCG 116 C +S P P P A AGGGR + GGG G Sbjct: 868 CRSAASAPPSACP*PSASAGGGRPLRTGGGAG 773
>LOC_Os04g22470:12004.t01977:unspliced-genomic SHR5-receptor-like kinase, putative| Length = 8502 Score = 35.0 bits (70), Expect = 1.1 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +3 / +1 Query: 588 VSPTSSDYDNNEDFVVIRKPLLIAQGAPSYLP 683 V PT D+D +E F VI LL QG+P P Sbjct: 8245 VDPTIKDFDKDEAFRVINVALLCTQGSPHQRP 8340
>LOC_Os03g09220:12003.t00777:unspliced-genomic expressed protein| Length = 4954 Score = 29.0 bits (57), Expect(2) = 1.5 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = -2 / +1 Query: 517 WQRSRLLLTKETRFWSSPVRSYGRYWIQCSL 425 W+RSR + + + W + S+ RY+ C L Sbjct: 1165 WRRSRAVQV*KNKTWDTECTSHTRYFFFCKL 1257 Score = 22.6 bits (43), Expect(2) = 1.5 Identities = 8/23 (34%), Positives = 13/23 (56%) Frame = -3 / +1 Query: 597 WVKPRLVESSPRKARVPGWQRWR 529 W+ RL + PR+ + W+R R Sbjct: 1111 WMTLRLQTAQPRRILILTWRRSR 1179
>LOC_Os01g42400:12001.t03758:unspliced-genomic protein kinase domain containing protein| Length = 2481 Score = 34.5 bits (69), Expect = 1.5 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +3 / +3 Query: 48 PKSPNPQAMAGGGRSEKNGGGCG 116 P+ P P A G GR E+ GGG G Sbjct: 2187 PRPPRPSAGEGAGRRERRGGGAG 2255
>LOC_Os10g05890:12010.t00462:unspliced-genomic expressed protein| Length = 2106 Score = 34.1 bits (68), Expect = 2.1 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = +3 / -1 Query: 27 LFSSEPKPKSPNPQAMAGGGRSEKNGGGCG 116 L SS P K+ + A GGGR +GGGCG Sbjct: 990 LDSSPPLAKARSGGASGGGGRG*ASGGGCG 901
>LOC_Os08g06344:12008.t00524:unspliced-genomic pre-mRNA-processing ATP-dependent RNA helicase prp5, putative,| expressed Length = 4936 Score = 34.1 bits (68), Expect = 2.1 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +3 / -1 Query: 42 PKPKSPNPQAMAGGGRSEKNGGGCG 116 PKP P P+ GGG + GG CG Sbjct: 508 PKPAPPAPRRGGGGGGATTGGGACG 434
>LOC_Os08g06250:12008.t00515:unspliced-genomic tetraspanin family protein, expressed| Length = 3570 Score = 34.1 bits (68), Expect = 2.1 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +3 / +2 Query: 438 IQYLPYDRTGELQNLVSFVNNNLDLCQWAALATFATQV 551 +Q +P D+TG + SF+ N + +W AL +V Sbjct: 1793 MQVIPVDKTGNFDMMYSFLKENWRIAKWVALGAVLFEV 1906
>LOC_Os04g58330:12004.t05296:unspliced-genomic expressed protein| Length = 3386 Score = 34.1 bits (68), Expect = 2.1 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +3 / +1 Query: 546 QVLSLFLAMILRAWVSPTSSDYDNNED 626 QVLS+ L M+LRA SDYD+++D Sbjct: 2755 QVLSIVLGMVLRALGPDRESDYDSDDD 2835
>LOC_Os02g25840:12002.t02278:unspliced-genomic expressed protein| Length = 2131 Score = 34.1 bits (68), Expect = 2.1 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 / +3 Query: 42 PKPKSPNPQAMAGGGRSEKNGGGCG 116 P P+ QA AGG R+ K GG CG Sbjct: 681 PPPRPSGHQAQAGGARAPKAGGCCG 755
>LOC_Os03g09160:12003.t00771:unspliced-genomic expressed protein| Length = 816 Score = 32.2 bits (64), Expect(2) = 2.3 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +3 / +1 Query: 78 GGGRSEKNGGGCGPCCLRFLLKLLA 152 GGG GG C PC LR L +LA Sbjct: 223 GGGGGGGKGGACSPCALRTLGAVLA 297 Score = 22.1 bits (42), Expect(2) = 2.3 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = +2 / +3 Query: 392 ARGSRGP*HPPQRALDPVSAV*PH 463 ARG RG H QRA +A PH Sbjct: 540 ARGRRGGRHGLQRAAPRDAARRPH 611
>LOC_Os01g48320:12001.t04276:unspliced-genomic 6b-interacting protein 1, putative, expressed| Length = 1799 Score = 33.6 bits (67), Expect = 2.9 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 / +1 Query: 42 PKPKSPNPQAMAGGGRSEKNGGG 110 P+P+ P P A+AGGGR + G Sbjct: 487 PQPREPPPAAVAGGGRGRQRAAG 555
>LOC_Os01g51040:12001.t04538:unspliced-genomic expressed protein| Length = 4378 Score = 33.1 bits (66), Expect = 4.0 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +3 / +2 Query: 855 WLYWKHLCSIFVVSCNIPWCDAHCIHLCA*SLC 953 W H + SC +P C AH IH+C+ +C Sbjct: 3377 WYVVHHSYLCSLSSCVLPSCRAHAIHVCSCLIC 3475
>LOC_Os01g31870:12001.t02768:unspliced-genomic metal transporter Nramp6, putative, expressed| Length = 11027 Score = 30.4 bits (60), Expect(2) = 5.1 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = +3 / +3 Query: 876 CSIFVVSCNIPWCDAHCIHLCA 941 C+ + + CN+ +CDA C +CA Sbjct: 8424 CNNYDMFCNVIFCDADCTIICA 8489 Score = 26.3 bits (51), Expect(2) = 5.1 Identities = 11/35 (31%), Positives = 16/35 (45%) Frame = +3 / +2 Query: 270 CAVMAAGLLYCAILLAVYIAAEFSSGCCFYFYTGL 374 CAV+ L Y +L + A + G C + GL Sbjct: 3746 CAVLGTALAYNMLLHIPFWAGVLACGACTFLILGL 3850
>LOC_Os06g43930:12006.t04083:unspliced-genomic lysosomal Pro-X carboxypeptidase precursor, putative, expressed| Length = 5517 Score = 32.7 bits (65), Expect = 5.5 Identities = 14/58 (24%), Positives = 30/58 (51%) Frame = +3 / -3 Query: 357 YFYTGLASVMILLEEAVAHNILLNEHWIQYLPYDRTGELQNLVSFVNNNLDLCQWAAL 530 +F+T SV L+ + + ++L + WI ++P ++ + +N L+LC + L Sbjct: 3652 HFFT*TCSVWYLIYQYIRQSLLPS*KWISFMPPVNLYSFLHITTMKHNYLNLCVYIIL 3479
>LOC_Os05g27360:12005.t02387:unspliced-genomic conserved hypothetical protein| Length = 486 Score = 32.7 bits (65), Expect = 5.5 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +3 / +1 Query: 33 SSEPKPKSPNPQAMAGGGRSEKNGGG 110 S P P+SP PQA+AG GR + G Sbjct: 289 SRRPPPQSPPPQAVAGWGRQIRRPSG 366
>LOC_Os04g57620:12004.t05228:unspliced-genomic hypothetical protein| Length = 3652 Score = 32.7 bits (65), Expect = 5.5 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -3 / +1 Query: 591 KPRLVESSPRKARVPGWQRWR 529 KPR V SSPR+A+ W +WR Sbjct: 730 KPRQVLSSPRQAKQQQWAQWR 792
>LOC_Os03g04940:12003.t00369:unspliced-genomic S-adenosylmethionine-dependent methyltransferase/ methyltransferase,| putative, expressed Length = 4627 Score = 32.7 bits (65), Expect = 5.5 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +3 / +1 Query: 270 CAVMAAGLLYCAILLAVYIAAEFSSGCCFYFYTGLASVMILLEEAVAHNILLNEHWIQ 443 C ++A L C++L V I +F F+F T + ILL + +L +Q Sbjct: 2695 CTLVALPFLICSVLFTVVIFLDFKYAPTFFFTTT*LFLYILLRNWIQATFILGSAGLQ 2868
>LOC_Os02g04380:12002.t005583:unspliced-genomic hypothetical protein| Length = 2507 Score = 32.7 bits (65), Expect = 5.5 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -2 / +2 Query: 532 ARAAHWQRSRLLLTKETRFWSSPVRSYGRYWIQCSLRRM 416 +RA W R L +W ++G W CSLRR+ Sbjct: 674 SRAPPWGRVHLAAAIPRNWWRRGYATFGVTWATCSLRRL 790
>LOC_Os01g22440:12001.t01979:unspliced-genomic hypothetical protein| Length = 459 Score = 32.7 bits (65), Expect = 5.5 Identities = 11/28 (39%), Positives = 13/28 (46%) Frame = +3 / +1 Query: 39 EPKPKSPNPQAMAGGGRSEKNGGGCGPC 122 +P P SP+P G G GC PC Sbjct: 88 DPPPSSPSPSRCVAVGAYGGGGAGCAPC 171
>LOC_Os06g12400:12006.t01117:unspliced-genomic homeobox protein HOX1A, putative, expressed| Length = 9126 Score = 26.3 bits (51), Expect(2) = 6.3 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +2 / -2 Query: 623 RFCGHKEAAAYCPRRSILSPY 685 R GH + +YCP R++L+ Y Sbjct: 8879 RTTGHDKQHSYCPLRTMLNCY 8817 Score = 23.1 bits (44), Expect(2) = 6.3 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +2 / -1 Query: 776 QHTGSKCSATTVRSFC 823 Q G+ +ATT+R FC Sbjct: 8736 QPKGTNIAATTIRLFC 8689
>LOC_Os11g32780:12011.t02874:unspliced-genomic expressed protein| Length = 3605 Score = 29.0 bits (57), Expect(2) = 6.4 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -2 / +3 Query: 859 SHAWPSFFITCRTEASHC 806 SH+WPSF IT SHC Sbjct: 1515 SHSWPSFPITMVLCLSHC 1568 Score = 25.8 bits (50), Expect(2) = 6.4 Identities = 8/30 (26%), Positives = 17/30 (56%) Frame = -2 / +2 Query: 499 LLTKETRFWSSPVRSYGRYWIQCSLRRMLW 410 +L++ +W+ V YG + +RR+L+ Sbjct: 2147 ILSRTVNYWAMTVSGYGNSLTEIEVRRVLF 2236
>LOC_Os09g24540:12009.t02135:unspliced-genomic peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative,| expressed Length = 2568 Score = 27.2 bits (53), Expect(2) = 6.4 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +3 / +1 Query: 36 SEPKPKSPNPQAMAGGGRSEKNGGGCG 116 S+PK K QA G + GGG G Sbjct: 109 SKPKDKGKGKQAAGSSGGDDAGGGGKG 189 Score = 27.2 bits (53), Expect(2) = 6.4 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +3 / +3 Query: 276 VMAAGLLYCAILLAVYIAAEFSSGCCFYFYTGLASVMILL 395 V A LL L + + + CCF+F+ L +V++L+ Sbjct: 441 VFGADLLLALKLFWLGLFCSW*ISCCFFFFGYLTAVLLLV 560
>LOC_Os05g04040:12005.t00301:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5952 Score = 29.0 bits (57), Expect(2) = 7.3 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +1 / +2 Query: 610 MTTMKILWS*GSRCLLPKALHPISLPR 690 ++TM++ WS G+ C PIS PR Sbjct: 4988 LSTMRLTWSGGAGCASSTPSKPISRPR 5068 Score = 26.3 bits (51), Expect(2) = 7.3 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = +3 / +3 Query: 33 SSEPKPKSPNPQAMAGGGRSEKNGG 107 S+ P P S P GG E NGG Sbjct: 3507 SAHPHPVSTRPGREQGGEAPESNGG 3581
>LOC_Os09g23200:12009.t02004:unspliced-genomic myb-like DNA-binding domain, SHAQKYF class family protein| Length = 6838 Score = 32.2 bits (64), Expect = 7.5 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 / -3 Query: 33 SSEPKPKSPNPQAMAGGGRSEKNGGGCGPCCLR 131 +S P P P P A AGGG S+ + P LR Sbjct: 1307 ASAPPPPPPPPAACAGGGDSDNSVDAVDPSSLR 1209
>LOC_Os08g09190:12008.t00805:unspliced-genomic auxin Efflux Carrier family protein, expressed| Length = 2545 Score = 32.2 bits (64), Expect = 7.5 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +3 / +1 Query: 816 ASVRQVMKKEGHAWLYWKHLCSIFVVS 896 AS+R KE A L+W+H+C++ +S Sbjct: 1954 ASLRGYAVKEASALLFWQHICAVLSLS 2034
>LOC_Os06g13200:12006.t01195:unspliced-genomic amino acid permease/ transporter, putative| Length = 4037 Score = 32.2 bits (64), Expect = 7.5 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -3 / -3 Query: 618 CCHSRCSWVKPRLVESSPRKARVPGWQRWR 529 C R + R +PR+AR+P W+RWR Sbjct: 3702 CSGGRRTRTTRRRGGGAPRRARLPPWRRWR 3613
>LOC_Os05g16740:12005.t01444:unspliced-genomic SHR5-receptor-like kinase, putative, expressed| Length = 10213 Score = 32.2 bits (64), Expect = 7.5 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 / +2 Query: 588 VSPTSSDYDNNEDFVVIRKPLLIAQGAPSYLP 683 V P+ +YD +E VIR LL QG+P P Sbjct: 9734 VDPSLMEYDKDEALRVIRVALLCTQGSPHQRP 9829
>LOC_Os05g17050:12005.t01474:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 18350 Score = 31.3 bits (62), Expect(2) = 7.8 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 / +2 Query: 588 VSPTSSDYDNNEDFVVIRKPLLIAQGAPSYLP 683 V P+ D+D +E F VI LL QG+P P Sbjct: 16688 VEPSLKDFDKDEVFRVICVALLCTQGSPHQRP 16783 Score = 25.4 bits (49), Expect(2) = 7.8 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +3 / +2 Query: 270 CAVMAAGLLYCAILLAVYIAAEFSSGCCFYFYTGLASVMILL 395 CA G + I+L+V S FYFY G + ILL Sbjct: 2843 CAKWLIGTKHGHIMLSVEQKNNISPEIIFYFYLGELA*TILL 2968 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 438,542,900 Number of extensions: 7042202 Number of successful extensions: 32781 Number of sequences better than 10.0: 32 Length of query: 407 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 357 Effective length of database: 52,799,986 Effective search space: 18849595002 Effective search space used: 18849595002 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)