| Clone Name | FLbaf108n08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Q9ESR9:ABCA2_RAT ATP-binding cassette sub-family A member 2 - Ra... | 33 | 1.8 | 2 | P41234:ABCA2_MOUSE ATP-binding cassette sub-family A member 2 - ... | 33 | 1.8 | 3 | Q9BZC7:ABCA2_HUMAN ATP-binding cassette sub-family A member 2 - ... | 32 | 4.1 | 4 | Q01745:GAOA_GIBZE Galactose oxidase precursor - Gibberella zeae ... | 32 | 5.3 |
|---|
>Q9ESR9:ABCA2_RAT ATP-binding cassette sub-family A member 2 - Rattus norvegicus| (Rat) Length = 2434 Score = 33.5 bits (75), Expect = 1.8 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Frame = +3 Query: 231 LHIHHLLPDLWFACAVMA-AGLLYCAILLAVYIAAEFSSGC--CFYFYTGLASVMILLEE 401 +H H L+ +W AV A A +++C ++ +Y A+ +S C YF + + + + + E Sbjct: 778 MHSHVLI--IWLFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIRE 835 Query: 402 AVAHN 416 VAH+ Sbjct: 836 EVAHD 840
>P41234:ABCA2_MOUSE ATP-binding cassette sub-family A member 2 - Mus musculus (Mouse)| Length = 2434 Score = 33.5 bits (75), Expect = 1.8 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Frame = +3 Query: 231 LHIHHLLPDLWFACAVMA-AGLLYCAILLAVYIAAEFSSGC--CFYFYTGLASVMILLEE 401 +H H L+ +W AV A A +++C ++ +Y A+ +S C YF + + + + + E Sbjct: 777 MHSHVLI--IWLFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIRE 834 Query: 402 AVAHN 416 VAH+ Sbjct: 835 EVAHD 839
>Q9BZC7:ABCA2_HUMAN ATP-binding cassette sub-family A member 2 - Homo sapiens (Human)| Length = 2436 Score = 32.3 bits (72), Expect = 4.1 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Frame = +3 Query: 231 LHIHHLLPDLWFACAVMA-AGLLYCAILLAVYIAAEFSSGC--CFYFYTGLASVMILLEE 401 +H H ++ +W AV A A +++C ++ +Y A+ +S C YF + + + + + E Sbjct: 779 MHSHVVI--IWLFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIRE 836 Query: 402 AVAHN 416 VAH+ Sbjct: 837 EVAHD 841
>Q01745:GAOA_GIBZE Galactose oxidase precursor - Gibberella zeae (Fusarium| graminearum) Length = 680 Score = 32.0 bits (71), Expect = 5.3 Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Frame = +3 Query: 600 SSDYDNNEDFVVIRKPLLIAQGAPSYLPTTADPKGVHPNLWSSSMRQKYG-LSSSRDYTY 776 +S YD++ D + + +A+G S + WS + +K G + S T+ Sbjct: 291 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 350 Query: 777 NTLDQNAVRPQ*EASVRQVMKKEGHAWLY-WK 869 +L V P A + + + + HAWL+ WK Sbjct: 351 TSLPNAKVNPMLTADKQGLYRSDNHAWLFGWK 382 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 179,916,820 Number of extensions: 3731622 Number of successful extensions: 10030 Number of sequences better than 10.0: 4 Number of HSP's gapped: 10004 Number of HSP's successfully gapped: 4 Length of query: 407 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 291 Effective length of database: 68,868,219 Effective search space: 20040651729 Effective search space used: 20040651729 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)