ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf108n08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001065199.1| Oryza sativa (japonica cultivar-group) Os06g... 135 4e-28
2dbj|AK120175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 4e-28
3emb|CT832972.1| Oryza sativa (indica cultivar-group) cDNA clone:... 127 1e-25
4dbj|AK098979.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 1e-25
5dbj|AK065285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 1e-25
6gb|AY106965.1| Zea mays PCO085091 mRNA sequence 117 1e-22
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 92 6e-15
8dbj|AP006616.2| Oryza sativa (japonica cultivar-group) genomic D... 92 6e-15
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.075
10dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.075
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.30
12dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.30
13ref|NM_001067580.1| Oryza sativa (japonica cultivar-group) Os08g... 44 1.2
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.2
15dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic D... 44 1.2
16dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic D... 44 1.2
17dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic D... 44 1.2
18dbj|AK102356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 1.2
19gb|AC187509.3| Gallus gallus BAC clone CH261-175B19 from chromos... 42 4.6
20gb|AC192440.1| Gallus gallus BAC clone CH261-95G6 from chromosom... 42 4.6
21gb|AC189263.1| Brassica rapa subsp. pekinensis clone KBrB021P17,... 42 4.6
22gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome 42 4.6
23gb|AC152833.3| Ornithorhynchus anatinus BAC clone OABb-6A1 from ... 42 4.6
24gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 4.6
25gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome... 42 4.6
26gb|AY421727.1| Cryptococcus neoformans var. neoformans Cas4p (CA... 42 4.6
27gb|AC119572.26| Ustilago hordei strain 4875-4 clone uhobac-5d9, ... 42 4.6
28gb|AC102643.9| Mus musculus chromosome 8, clone RP23-304B22, com... 42 4.6
29ref|XM_571024.1| Cryptococcus neoformans var. neoformans JEC21 t... 42 4.6
30ref|NM_063458.1| Caenorhabditis elegans T01B7.8 (T01B7.8) mRNA, ... 42 4.6
31emb|Z66499.1|CET01B7 Caenorhabditis elegans Cosmid T01B7, comple... 42 4.6
32dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.6
33dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.6
34emb|AL096861.9|HSDJ824H1 Human DNA sequence from clone RP5-824H1... 42 4.6
35dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.6
36emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain... 42 4.6
37gb|AC105042.7| Homo sapiens chromosome 18, clone CTD-2544E12, co... 42 4.6 
>ref|NM_001065199.1| Oryza sativa (japonica cultivar-group) Os06g0731400 (Os06g0731400)
           mRNA, complete cds
          Length = 1133
 Score =  135 bits (68), Expect = 4e-28
 Identities = 134/156 (85%)
 Strand = Plus / Plus

                                                                       
Query: 147 ctcgccttcccgcaggccttcgccgccctctccgccgtcctctacgccgcctccatcctc 206
           ||||||||||  ||||||||||||||  |||||||| | ||||||||||| |  ||||||
Sbjct: 148 ctcgccttcctccaggccttcgccgctgtctccgccctactctacgccgcatggatcctc 207

                                                                       
Query: 207 tcccgatgggcgcgccaccatgagctccacatccaccacctcctcccggacctctggttc 266
           ||||| ||||||||||||||  | |||||| ||||  |||| ||||| ||||||||||||
Sbjct: 208 tcccgttgggcgcgccaccaccatctccacctccaagacctactccccgacctctggttc 267

                                               
Query: 267 gcctgcgccgtcatggccgccggcctcctctactgc 302
           | ||||||| ||||||| ||||||||| ||||||||
Sbjct: 268 gtctgcgccctcatggctgccggcctcttctactgc 303



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 156/193 (80%), Gaps = 3/193 (1%)
 Strand = Plus / Plus

                                                                       
Query: 605 cgactatgacaacaatgaagattttgtggtcataaggaagccgctgcttattgcccaagg 664
           |||||||||||   |||||||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 606 cgactatgacagtgatgaagattttgtggtcataaggaggccacttctggttgcccaagg 665

                                                                       
Query: 665 cgctccatcctatctccctaccacggctgaccccaaaggcgtccatccgaacctatggag 724
            |||||  | ||||| |||||||| || ||  | | |||  |||||||  ||||||||||
Sbjct: 666 tgctcccgcttatcttcctaccaccgccgatactagaggtttccatccagacctatggag 725

                                                                       
Query: 725 ctcatcgatgaggcagaagtatggactgagctcctcacgggactacacctacaacacact 784
           ||||   ||||| || ||||||||| |||    |||| |  |||||||||||||||||||
Sbjct: 726 ctcaagaatgagacacaagtatggattga---actcaagcaactacacctacaacacact 782

                        
Query: 785 ggatcaaaatgca 797
           ||||| |||||||
Sbjct: 783 ggatccaaatgca 795



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 432 cactggatccagtatctgccgtatgaccgcaccggaga 469
           |||||||||||| || |||| ||||||||||| |||||
Sbjct: 433 cactggatccaggatttgccatatgaccgcactggaga 470
to top
>dbj|AK120175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033B05, full
           insert sequence
          Length = 1693

 Score =  135 bits (68), Expect = 4e-28
 Identities = 134/156 (85%)
 Strand = Plus / Plus

                                                                       
Query: 147 ctcgccttcccgcaggccttcgccgccctctccgccgtcctctacgccgcctccatcctc 206
           ||||||||||  ||||||||||||||  |||||||| | ||||||||||| |  ||||||
Sbjct: 156 ctcgccttcctccaggccttcgccgctgtctccgccctactctacgccgcatggatcctc 215

                                                                       
Query: 207 tcccgatgggcgcgccaccatgagctccacatccaccacctcctcccggacctctggttc 266
           ||||| ||||||||||||||  | |||||| ||||  |||| ||||| ||||||||||||
Sbjct: 216 tcccgttgggcgcgccaccaccatctccacctccaagacctactccccgacctctggttc 275

                                               
Query: 267 gcctgcgccgtcatggccgccggcctcctctactgc 302
           | ||||||| ||||||| ||||||||| ||||||||
Sbjct: 276 gtctgcgccctcatggctgccggcctcttctactgc 311



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 156/193 (80%), Gaps = 3/193 (1%)
 Strand = Plus / Plus

                                                                       
Query: 605 cgactatgacaacaatgaagattttgtggtcataaggaagccgctgcttattgcccaagg 664
           |||||||||||   |||||||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 735 cgactatgacagtgatgaagattttgtggtcataaggaggccacttctggttgcccaagg 794

                                                                       
Query: 665 cgctccatcctatctccctaccacggctgaccccaaaggcgtccatccgaacctatggag 724
            |||||  | ||||| |||||||| || ||  | | |||  |||||||  ||||||||||
Sbjct: 795 tgctcccgcttatcttcctaccaccgccgatactagaggtttccatccagacctatggag 854

                                                                       
Query: 725 ctcatcgatgaggcagaagtatggactgagctcctcacgggactacacctacaacacact 784
           ||||   ||||| || ||||||||| |||    |||| |  |||||||||||||||||||
Sbjct: 855 ctcaagaatgagacacaagtatggattga---actcaagcaactacacctacaacacact 911

                        
Query: 785 ggatcaaaatgca 797
           ||||| |||||||
Sbjct: 912 ggatccaaatgca 924



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 432 cactggatccagtatctgccgtatgaccgcaccggaga 469
           |||||||||||| || |||| ||||||||||| |||||
Sbjct: 562 cactggatccaggatttgccatatgaccgcactggaga 599
to top
>emb|CT832972.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108G22, full
           insert sequence
          Length = 1076

 Score =  127 bits (64), Expect = 1e-25
 Identities = 124/144 (86%)
 Strand = Plus / Plus

                                                                       
Query: 159 caggccttcgccgccctctccgccgtcctctacgccgcctccatcctctcccgatgggcg 218
           ||||||||||||||  |||||||| | ||||||||||| |  ||||||||||| ||||||
Sbjct: 238 caggccttcgccgctgtctccgccctactctacgccgcatggatcctctcccgttgggcg 297

                                                                       
Query: 219 cgccaccatgagctccacatccaccacctcctcccggacctctggttcgcctgcgccgtc 278
           ||||||||  | |||||| ||||  |||| ||||| ||||||||||||| ||||||| ||
Sbjct: 298 cgccaccaccatctccacctccaagacctactccccgacctctggttcgtctgcgccctc 357

                                   
Query: 279 atggccgccggcctcctctactgc 302
           ||||| ||||||||| ||||||||
Sbjct: 358 atggctgccggcctcttctactgc 381



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 156/193 (80%), Gaps = 3/193 (1%)
 Strand = Plus / Plus

                                                                       
Query: 605 cgactatgacaacaatgaagattttgtggtcataaggaagccgctgcttattgcccaagg 664
           |||||||||||   |||||||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 684 cgactatgacagtgatgaagattttgtggtcataaggaggccacttctggttgcccaagg 743

                                                                       
Query: 665 cgctccatcctatctccctaccacggctgaccccaaaggcgtccatccgaacctatggag 724
            |||||  | ||||| |||||||| || ||  | | |||  |||||||  ||||||||||
Sbjct: 744 tgctcccgcttatcttcctaccaccgccgatactagaggtttccatccagacctatggag 803

                                                                       
Query: 725 ctcatcgatgaggcagaagtatggactgagctcctcacgggactacacctacaacacact 784
           ||||   ||||| || ||||||||| |||    |||| |  |||||||||||||||||||
Sbjct: 804 ctcaagaatgagacacaagtatggattga---actcaagcaactacacctacaacacact 860

                        
Query: 785 ggatcaaaatgca 797
           ||||| |||||||
Sbjct: 861 ggatccaaatgca 873



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 432 cactggatccagtatctgccgtatgaccgcaccggaga 469
           |||||||||||| || |||| ||||||||||| |||||
Sbjct: 511 cactggatccaggatttgccatatgaccgcactggaga 548
to top
>dbj|AK098979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093C17, full
           insert sequence
          Length = 1120

 Score =  127 bits (64), Expect = 1e-25
 Identities = 133/156 (85%)
 Strand = Plus / Plus

                                                                       
Query: 147 ctcgccttcccgcaggccttcgccgccctctccgccgtcctctacgccgcctccatcctc 206
           ||||||||||  ||||||||||||||  |||||||| | |||||||| || |  ||||||
Sbjct: 149 ctcgccttcctccaggccttcgccgctgtctccgccctactctacgctgcatggatcctc 208

                                                                       
Query: 207 tcccgatgggcgcgccaccatgagctccacatccaccacctcctcccggacctctggttc 266
           ||||| ||||||||||||||  | |||||| ||||  |||| ||||| ||||||||||||
Sbjct: 209 tcccgttgggcgcgccaccaccatctccacctccaagacctactccccgacctctggttc 268

                                               
Query: 267 gcctgcgccgtcatggccgccggcctcctctactgc 302
           | ||||||| ||||||| ||||||||| ||||||||
Sbjct: 269 gtctgcgccctcatggctgccggcctcttctactgc 304



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 155/193 (80%), Gaps = 3/193 (1%)
 Strand = Plus / Plus

                                                                       
Query: 605 cgactatgacaacaatgaagattttgtggtcataaggaagccgctgcttattgcccaagg 664
           |||||||||||   |||||||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 607 cgactatgacagtgatgaagattttgtggtcataaggaggccacttctggttgcccaagg 666

                                                                       
Query: 665 cgctccatcctatctccctaccacggctgaccccaaaggcgtccatccgaacctatggag 724
            |||||  | ||||| |||||||| || ||  | | |||  |||||||   |||||||||
Sbjct: 667 tgctcccgcttatcttcctaccaccgccgatactagaggtttccatccaggcctatggag 726

                                                                       
Query: 725 ctcatcgatgaggcagaagtatggactgagctcctcacgggactacacctacaacacact 784
           ||||   ||||| || ||||||||| |||    |||| |  |||||||||||||||||||
Sbjct: 727 ctcaagaatgagacacaagtatggattga---actcaagcaactacacctacaacacact 783

                        
Query: 785 ggatcaaaatgca 797
           ||||| |||||||
Sbjct: 784 ggatccaaatgca 796



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 432 cactggatccagtatctgccgtatgaccgcaccggaga 469
           |||||||||||| || |||| ||||||||||| |||||
Sbjct: 434 cactggatccaggatttgccatatgaccgcactggaga 471
to top
>dbj|AK065285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M13, full
           insert sequence
          Length = 1136

 Score =  127 bits (64), Expect = 1e-25
 Identities = 133/156 (85%)
 Strand = Plus / Plus

                                                                       
Query: 147 ctcgccttcccgcaggccttcgccgccctctccgccgtcctctacgccgcctccatcctc 206
           ||||||||||  ||||||||||||||  |||||||| | ||||||||||| |  ||||||
Sbjct: 149 ctcgccttcctccaggccttcgccgctgtctccgccctactctacgccgcatggatcctc 208

                                                                       
Query: 207 tcccgatgggcgcgccaccatgagctccacatccaccacctcctcccggacctctggttc 266
           ||||| ||||| ||||||||  | |||||| ||||  |||| ||||| ||||||||||||
Sbjct: 209 tcccgttgggcacgccaccaccatctccacctccaagacctactccccgacctctggttc 268

                                               
Query: 267 gcctgcgccgtcatggccgccggcctcctctactgc 302
           | ||||||| ||||||| ||||||||| ||||||||
Sbjct: 269 gtctgcgccctcatggctgccggcctcttctactgc 304



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 156/193 (80%), Gaps = 3/193 (1%)
 Strand = Plus / Plus

                                                                       
Query: 605 cgactatgacaacaatgaagattttgtggtcataaggaagccgctgcttattgcccaagg 664
           |||||||||||   |||||||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 607 cgactatgacagtgatgaagattttgtggtcataaggaggccacttctggttgcccaagg 666

                                                                       
Query: 665 cgctccatcctatctccctaccacggctgaccccaaaggcgtccatccgaacctatggag 724
            |||||  | ||||| |||||||| || ||  | | |||  |||||||  ||||||||||
Sbjct: 667 tgctcccgcttatcttcctaccaccgccgatactagaggtttccatccagacctatggag 726

                                                                       
Query: 725 ctcatcgatgaggcagaagtatggactgagctcctcacgggactacacctacaacacact 784
           ||||   ||||| || ||||||||| |||    |||| |  |||||||||||||||||||
Sbjct: 727 ctcaagaatgagacacaagtatggattga---actcaagcaactacacctacaacacact 783

                        
Query: 785 ggatcaaaatgca 797
           ||||| |||||||
Sbjct: 784 ggatccaaatgca 796



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 432 cactggatccagtatctgccgtatgaccgcaccggaga 469
           |||||||||||| || |||| ||||||||||| |||||
Sbjct: 434 cactggatccaggatttgccatatgaccgcactggaga 471
to top
>gb|AY106965.1| Zea mays PCO085091 mRNA sequence
          Length = 928

 Score =  117 bits (59), Expect = 1e-22
 Identities = 104/119 (87%)
 Strand = Plus / Plus

                                                                       
Query: 118 cgtgctgcctgcggttcctgctcaagctgctcgccttcccgcaggccttcgccgccctct 177
           ||||||||||  | |||||||||||||||||||| ||||  ||||||||||||||| |||
Sbjct: 176 cgtgctgcctcggcttcctgctcaagctgctcgcgttcctccaggccttcgccgccgtct 235

                                                                      
Query: 178 ccgccgtcctctacgccgcctccatcctctcccgatgggcgcgccaccatgagctccac 236
           ||||| || |||||||||| |  ||||||||||| ||||||||||||||  ||||||||
Sbjct: 236 ccgccctcatctacgccgcttggatcctctcccgctgggcgcgccaccaccagctccac 294



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 122/151 (80%)
 Strand = Plus / Plus

                                                                       
Query: 423 ctcaacgagcactggatccagtatctgccgtatgaccgcaccggagagctccagaacctc 482
           |||||| |||||||||||||| | |||||  | ||||||||||| |||||||| ||| | 
Sbjct: 484 ctcaaccagcactggatccaggaactgccagaggaccgcaccggcgagctccacaactta 543

                                                                       
Query: 483 gtctccttcgtcaataacaacctcgacctctgccaatgggctgctctcgccacctttgcc 542
            |||||||| || | || || |||||||| ||| |||||| |||||| |||| ||| |||
Sbjct: 544 ctctccttcatccacaataatctcgacctatgcaaatgggttgctcttgccatcttcgcc 603

                                          
Query: 543 acccaggtactctcgcttttcttggcgatga 573
           |  |||| |||||| ||| || |||| ||||
Sbjct: 604 atgcaggcactctcacttctcctggctatga 634
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 91.7 bits (46), Expect = 6e-15
 Identities = 100/118 (84%)
 Strand = Plus / Plus

                                                                            
Query: 147      ctcgccttcccgcaggccttcgccgccctctccgccgtcctctacgccgcctccatcctc 206
                ||||||||||  ||||||||||||||  |||||||| | ||||||||||| |  ||||||
Sbjct: 30665923 ctcgccttcctccaggccttcgccgctgtctccgccctactctacgccgcatggatcctc 30665982

                                                                          
Query: 207      tcccgatgggcgcgccaccatgagctccacatccaccacctcctcccggacctctggt 264
                ||||| ||||||||||||||  | |||||| ||||  |||| ||||| ||||||||||
Sbjct: 30665983 tcccgttgggcgcgccaccaccatctccacctccaagacctactccccgacctctggt 30666040



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                            
Query: 605      cgactatgacaacaatgaagattttgtggtcataaggaagccgctgcttattgcccaagg 664
                |||||||||||   |||||||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 30666778 cgactatgacagtgatgaagattttgtggtcataaggaggccacttctggttgcccaagg 30666837

                                        
Query: 665      cgctccatcctatctccctaccac 688
                 |||||  | ||||| ||||||||
Sbjct: 30666838 tgctcccgcttatcttcctaccac 30666861



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 766      actacacctacaacacactggatcaaaatgca 797
                |||||||||||||||||||||||| |||||||
Sbjct: 30668026 actacacctacaacacactggatccaaatgca 30668057
to top
>dbj|AP006616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1206D04
          Length = 130176

 Score = 91.7 bits (46), Expect = 6e-15
 Identities = 100/118 (84%)
 Strand = Plus / Plus

                                                                         
Query: 147   ctcgccttcccgcaggccttcgccgccctctccgccgtcctctacgccgcctccatcctc 206
             ||||||||||  ||||||||||||||  |||||||| | ||||||||||| |  ||||||
Sbjct: 68579 ctcgccttcctccaggccttcgccgctgtctccgccctactctacgccgcatggatcctc 68638

                                                                       
Query: 207   tcccgatgggcgcgccaccatgagctccacatccaccacctcctcccggacctctggt 264
             ||||| ||||||||||||||  | |||||| ||||  |||| ||||| ||||||||||
Sbjct: 68639 tcccgttgggcgcgccaccaccatctccacctccaagacctactccccgacctctggt 68696



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                         
Query: 605   cgactatgacaacaatgaagattttgtggtcataaggaagccgctgcttattgcccaagg 664
             |||||||||||   |||||||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 69434 cgactatgacagtgatgaagattttgtggtcataaggaggccacttctggttgcccaagg 69493

                                     
Query: 665   cgctccatcctatctccctaccac 688
              |||||  | ||||| ||||||||
Sbjct: 69494 tgctcccgcttatcttcctaccac 69517



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 766   actacacctacaacacactggatcaaaatgca 797
             |||||||||||||||||||||||| |||||||
Sbjct: 70682 actacacctacaacacactggatccaaatgca 70713
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.075
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 167      cgccgccctctccgccgtcctctacgcc 194
                ||||||||||||||||| ||||||||||
Sbjct: 25093701 cgccgccctctccgccgccctctacgcc 25093728



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 169      ccgccctctccgccgtcctctacgcc 194
                ||||||||||||||| ||||||||||
Sbjct: 25093786 ccgccctctccgccgccctctacgcc 25093811
to top
>dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1003_H02
          Length = 124043

 Score = 48.1 bits (24), Expect = 0.075
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 167   cgccgccctctccgccgtcctctacgcc 194
             ||||||||||||||||| ||||||||||
Sbjct: 14188 cgccgccctctccgccgccctctacgcc 14215



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 169   ccgccctctccgccgtcctctacgcc 194
             ||||||||||||||| ||||||||||
Sbjct: 14273 ccgccctctccgccgccctctacgcc 14298
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 172      ccctctccgccgtcctctacgcc 194
                |||||||||||||||||||||||
Sbjct: 21114286 ccctctccgccgtcctctacgcc 21114308



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 231     ctccacatccaccacctcctcc 252
               ||||||||||||||||||||||
Sbjct: 3511880 ctccacatccaccacctcctcc 3511901
to top
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0413H11
          Length = 147655

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 172   ccctctccgccgtcctctacgcc 194
             |||||||||||||||||||||||
Sbjct: 85496 ccctctccgccgtcctctacgcc 85518
to top
>ref|NM_001067580.1| Oryza sativa (japonica cultivar-group) Os08g0159900 (Os08g0159900)
           mRNA, complete cds
          Length = 3681

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 231 ctccacatccaccacctcctcc 252
           ||||||||||||||||||||||
Sbjct: 509 ctccacatccaccacctcctcc 488
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 165      ttcgccgccctctccgccgtcctctacgcc 194
                ||||||||||||||||| | ||||||||||
Sbjct: 20338144 ttcgccgccctctccgctgccctctacgcc 20338115



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 169      ccgccctctccgccgtcctctacgcc 194
                ||||||||||||||| ||||||||||
Sbjct: 20338223 ccgccctctccgccgccctctacgcc 20338198
to top
>dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0006J22
          Length = 145271

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 165   ttcgccgccctctccgccgtcctctacgcc 194
             ||||||||||||||||| | ||||||||||
Sbjct: 88949 ttcgccgccctctccgctgccctctacgcc 88920



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 169   ccgccctctccgccgtcctctacgcc 194
             ||||||||||||||| ||||||||||
Sbjct: 89028 ccgccctctccgccgccctctacgcc 89003
to top
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0498E12
          Length = 153523

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 231    ctccacatccaccacctcctcc 252
              ||||||||||||||||||||||
Sbjct: 145299 ctccacatccaccacctcctcc 145320
to top
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0672D01
          Length = 146954

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 231   ctccacatccaccacctcctcc 252
             ||||||||||||||||||||||
Sbjct: 67597 ctccacatccaccacctcctcc 67618
to top
>dbj|AK102356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091H10, full
           insert sequence
          Length = 3682

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 231 ctccacatccaccacctcctcc 252
           ||||||||||||||||||||||
Sbjct: 510 ctccacatccaccacctcctcc 489
to top
>gb|AC187509.3| Gallus gallus BAC clone CH261-175B19 from chromosome z, complete sequence
          Length = 207011

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 21     tgcttcctcttctcctctgaa 41
              |||||||||||||||||||||
Sbjct: 159233 tgcttcctcttctcctctgaa 159213
to top
>gb|AC192440.1| Gallus gallus BAC clone CH261-95G6 from chromosome z, complete sequence
          Length = 166370

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    tgcttcctcttctcctctgaa 41
             |||||||||||||||||||||
Sbjct: 20520 tgcttcctcttctcctctgaa 20500
to top
>gb|AC189263.1| Brassica rapa subsp. pekinensis clone KBrB021P17, complete sequence
          Length = 135260

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     cctctgaacccaaacccaagt 54
              |||||||||||||||||||||
Sbjct: 114688 cctctgaacccaaacccaagt 114708
to top
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome
          Length = 3225748

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 143     gctgctcgccttcccgcaggccttcgccgccct 175
               ||||||| ||||| ||| |||||||||||||||
Sbjct: 1773623 gctgctctccttcgcgctggccttcgccgccct 1773655
to top
>gb|AC152833.3| Ornithorhynchus anatinus BAC clone OABb-6A1 from chromosome unknown,
             complete sequence
          Length = 141309

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   ctactgcgccatcctcctcgc 316
             |||||||||||||||||||||
Sbjct: 28958 ctactgcgccatcctcctcgc 28978
to top
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
               sequence
          Length = 1507550

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 509     cctctgccaatgggctgctctcgcc 533
               |||||||||||| ||||||||||||
Sbjct: 1391317 cctctgccaatgcgctgctctcgcc 1391341
to top
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004O15 map near R3342S, complete sequence
          Length = 140142

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 173   cctctccgccgtcctctacgccgcc 197
             ||||||||||||||||| |||||||
Sbjct: 71587 cctctccgccgtcctctccgccgcc 71563



 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 173   cctctccgccgtcctctacgccgcc 197
             ||||||||||||||||| |||||||
Sbjct: 71723 cctctccgccgtcctctccgccgcc 71699
to top
>gb|AY421727.1| Cryptococcus neoformans var. neoformans Cas4p (CAS4) gene, complete
            cds
          Length = 2650

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 509  cctctgccaatgggctgctctcgcc 533
            |||||||||||| ||||||||||||
Sbjct: 1839 cctctgccaatgcgctgctctcgcc 1863
to top
>gb|AC119572.26| Ustilago hordei strain 4875-4 clone uhobac-5d9, complete sequence
          Length = 152059

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   ccacatccaccacctcctccc 253
             |||||||||||||||||||||
Sbjct: 99855 ccacatccaccacctcctccc 99875
to top
>gb|AC102643.9| Mus musculus chromosome 8, clone RP23-304B22, complete sequence
          Length = 210037

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 883   tatttgtagtatcttgtaata 903
             |||||||||||||||||||||
Sbjct: 70076 tatttgtagtatcttgtaata 70056
to top
>ref|XM_571024.1| Cryptococcus neoformans var. neoformans JEC21 triose
           phosphate/3-phosphoglycerate/phosphate translocator
           (CNE04990) partial mRNA
          Length = 1305

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 509 cctctgccaatgggctgctctcgcc 533
           |||||||||||| ||||||||||||
Sbjct: 624 cctctgccaatgcgctgctctcgcc 648
to top
>ref|NM_063458.1| Caenorhabditis elegans T01B7.8 (T01B7.8) mRNA, complete cds
          Length = 495

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 232 tccacatccaccacctcctcc 252
           |||||||||||||||||||||
Sbjct: 249 tccacatccaccacctcctcc 229
to top
>emb|Z66499.1|CET01B7 Caenorhabditis elegans Cosmid T01B7, complete sequence
          Length = 26180

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 232   tccacatccaccacctcctcc 252
             |||||||||||||||||||||
Sbjct: 25579 tccacatccaccacctcctcc 25599
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 173      cctctccgccgtcctctacgccgcc 197
                ||||||||||||||||| |||||||
Sbjct: 27650250 cctctccgccgtcctctccgccgcc 27650274



 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 173      cctctccgccgtcctctacgccgcc 197
                ||||||||||||||||| |||||||
Sbjct: 27650386 cctctccgccgtcctctccgccgcc 27650410
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 222      caccatgagctccacatccaccacc 246
                |||||||||||| ||||||||||||
Sbjct: 16797094 caccatgagctcgacatccaccacc 16797118
to top
>emb|AL096861.9|HSDJ824H1 Human DNA sequence from clone RP5-824H1 on chromosome Xq27.1-28, complete
              sequence
          Length = 129686

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 607    actatgacaacaatgaagatt 627
              |||||||||||||||||||||
Sbjct: 108034 actatgacaacaatgaagatt 108054
to top
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0047B10
          Length = 158798

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 222    caccatgagctccacatccaccacc 246
              |||||||||||| ||||||||||||
Sbjct: 145788 caccatgagctcgacatccaccacc 145812
to top
>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364
          Length = 526707

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 233    ccacatccaccacctcctccc 253
              |||||||||||||||||||||
Sbjct: 469703 ccacatccaccacctcctccc 469723
to top
>gb|AC105042.7| Homo sapiens chromosome 18, clone CTD-2544E12, complete sequence
          Length = 159505

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 233   ccacatccaccacctcctccc 253
             |||||||||||||||||||||
Sbjct: 80670 ccacatccaccacctcctccc 80650


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 197,938,376
Number of extensions: 10539798
Number of successful extensions: 217905
Number of sequences better than 10.0: 37
Number of HSP's gapped: 217901
Number of HSP's successfully gapped: 64
Length of query: 1223
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1200
Effective length of database: 18,503,978,556
Effective search space: 22204774267200
Effective search space used: 22204774267200
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top