ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf106c19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001066605.1| Oryza sativa (japonica cultivar-group) Os07g0573800 (Os07g0573800) mRNA, complete cds Length = 1420 Score = 821 bits (414), Expect = 0.0 Identities = 714/814 (87%) Strand = Plus / Plus Query: 286 cctcctcctcgccttctcagatggccgcgcctgccgatgccccgggaggatctgccgacg 345 |||||||||| | ||||||||||| |||||||||||||| ||||| ||||| || |||| Sbjct: 285 cctcctcctcctcctctcagatggcggcgcctgccgatgcaccgggcggatccgcggacg 344 Query: 346 cgttcgaggtgatccgcgctcaccaggtaaaagctgcccggcttcctcctgttgaagaaa 405 ||||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||| Sbjct: 345 cgttcgaggtgatccgcgctcaccaggaaaaagctgctcgacttcctccggttgaagaaa 404 Query: 406 tacgaaccattctggaccaaagtgtcagaggtgttctggctacccattctcaggaacatg 465 |||| |||||||||||||||||||| || ||||| || || ||||||||||||| |||| Sbjct: 405 tacggaccattctggaccaaagtgttaggggtgtccttgccacccattctcagggtcatg 464 Query: 466 tgggttatccatctggttcaatggttgattttgcgtgcgatcaagatggttcccccatat 525 | || ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 465 ttggctatccgtctggttcaatggttgattttgcatgtgatcaggatggttcccccatat 524 Query: 526 tagcagtgagtagtttagcagttcactcaaagaatctcacaggaagtactaaatgctcac 585 ||||||| |||||||||||| ||||||||||||||||| | | || | |||||||||| | Sbjct: 525 tagcagttagtagtttagcaattcactcaaagaatctctctgaaaatcctaaatgctcgc 584 Query: 586 ttttggttgccaaagatccagaggacagaacagatactgtaatcactgtatatggcgatg 645 || ||||||||||||| || |||||||||||||||||||| || ||||||||||| |||| Sbjct: 585 ttctggttgccaaagaccctgaggacagaacagatactgtgattactgtatatggtgatg 644 Query: 646 ctatacctgttcccgacgaagaaaaagatgccgtaagaactgcatatttacggagacacc 705 | | ||||||| | ||| ||||||||||||| ||| ||| |||||| ||||| ||||| | Sbjct: 645 ccacacctgtttcagaccaagaaaaagatgcagtacgaagtgcatacttacgaagacatc 704 Query: 706 ctgaggccttttgggttgactttggtgacttccgttttctgcacatcaaaccaaaagctg 765 ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct: 705 ctgaggcattttgggttgattttggtgacttccgttttctgcacatcaagccaaaagccg 764 Query: 766 tacgttacgtatctggggttgcaacagctatccttggctctggagaatttagtgcagctg 825 | || || || |||||||||||||| || |||||||| ||||||||||| ||||| |||| Sbjct: 765 tgcgatatgtgtctggggttgcaactgccatccttggttctggagaattcagtgctgctg 824 Query: 826 agttcaaggaagcaaaagtggatcccatatctcagttctccactcctattgcaggccaca 885 |||||||||| ||||||||||| || |||||||| ||||| || |||||| | |||||| Sbjct: 825 agttcaaggaggcaaaagtggacccaatatctcaattctcaacccctattacgagccaca 884 Query: 886 tgaacaaggatcatgctgatgatacaaagctcattgtgcaacactcaacctctgttaagg 945 |||| ||||||||| |||||||||||||||||||||||||| |||||||| |||| |||| Sbjct: 885 tgaataaggatcattctgatgatacaaagctcattgtgcaatactcaaccactgtcaagg 944 Query: 946 tggattttgcttctattgtggacgtggatagcctcggtatcaatgtgaaggctggttacg 1005 |||| ||||||| || | || |||||||| || ||| ||||||||||||| || || | Sbjct: 945 tggactttgcttacatgcttgatgtggatagtcttggtttcaatgtgaaggcgggctatg 1004 Query: 1006 acggaactgttctgaagctgcgaattcccttccctaggcgtgctcaagacagaaaggatg 1065 | |||| ||||||||||||||| || ||||||||||||||||| || ||||| ||||||| Sbjct: 1005 atggaagtgttctgaagctgcgtatccccttccctaggcgtgcacaggacaggaaggatg 1064 Query: 1066 ttaagacacttattgtggaaatgctacaggctgc 1099 ||||||||||||||||||||||||| || ||||| Sbjct: 1065 ttaagacacttattgtggaaatgctccaagctgc 1098 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Plus Query: 136 cgccgtcaacgctctcgcgactgctccgcc 165 ||||||||||||||||||| |||||||||| Sbjct: 144 cgccgtcaacgctctcgcggctgctccgcc 173
>dbj|AK104308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-H04, full insert sequence Length = 1253 Score = 821 bits (414), Expect = 0.0 Identities = 714/814 (87%) Strand = Plus / Plus Query: 286 cctcctcctcgccttctcagatggccgcgcctgccgatgccccgggaggatctgccgacg 345 |||||||||| | ||||||||||| |||||||||||||| ||||| ||||| || |||| Sbjct: 243 cctcctcctcctcctctcagatggcggcgcctgccgatgcaccgggcggatccgcggacg 302 Query: 346 cgttcgaggtgatccgcgctcaccaggtaaaagctgcccggcttcctcctgttgaagaaa 405 ||||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||| Sbjct: 303 cgttcgaggtgatccgcgctcaccaggaaaaagctgctcgacttcctccggttgaagaaa 362 Query: 406 tacgaaccattctggaccaaagtgtcagaggtgttctggctacccattctcaggaacatg 465 |||| |||||||||||||||||||| || ||||| || || ||||||||||||| |||| Sbjct: 363 tacggaccattctggaccaaagtgttaggggtgtccttgccacccattctcagggtcatg 422 Query: 466 tgggttatccatctggttcaatggttgattttgcgtgcgatcaagatggttcccccatat 525 | || ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 423 ttggctatccgtctggttcaatggttgattttgcatgtgatcaggatggttcccccatat 482 Query: 526 tagcagtgagtagtttagcagttcactcaaagaatctcacaggaagtactaaatgctcac 585 ||||||| |||||||||||| ||||||||||||||||| | | || | |||||||||| | Sbjct: 483 tagcagttagtagtttagcaattcactcaaagaatctctctgaaaatcctaaatgctcgc 542 Query: 586 ttttggttgccaaagatccagaggacagaacagatactgtaatcactgtatatggcgatg 645 || ||||||||||||| || |||||||||||||||||||| || ||||||||||| |||| Sbjct: 543 ttctggttgccaaagaccctgaggacagaacagatactgtgattactgtatatggtgatg 602 Query: 646 ctatacctgttcccgacgaagaaaaagatgccgtaagaactgcatatttacggagacacc 705 | | ||||||| | ||| ||||||||||||| ||| ||| |||||| ||||| ||||| | Sbjct: 603 ccacacctgtttcagaccaagaaaaagatgcagtacgaagtgcatacttacgaagacatc 662 Query: 706 ctgaggccttttgggttgactttggtgacttccgttttctgcacatcaaaccaaaagctg 765 ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct: 663 ctgaggcattttgggttgattttggtgacttccgttttctgcacatcaagccaaaagccg 722 Query: 766 tacgttacgtatctggggttgcaacagctatccttggctctggagaatttagtgcagctg 825 | || || || |||||||||||||| || |||||||| ||||||||||| ||||| |||| Sbjct: 723 tgcgatatgtgtctggggttgcaactgccatccttggttctggagaattcagtgctgctg 782 Query: 826 agttcaaggaagcaaaagtggatcccatatctcagttctccactcctattgcaggccaca 885 |||||||||| ||||||||||| || |||||||| ||||| || |||||| | |||||| Sbjct: 783 agttcaaggaggcaaaagtggacccaatatctcaattctcaacccctattacgagccaca 842 Query: 886 tgaacaaggatcatgctgatgatacaaagctcattgtgcaacactcaacctctgttaagg 945 |||| ||||||||| |||||||||||||||||||||||||| |||||||| |||| |||| Sbjct: 843 tgaataaggatcattctgatgatacaaagctcattgtgcaatactcaaccactgtcaagg 902 Query: 946 tggattttgcttctattgtggacgtggatagcctcggtatcaatgtgaaggctggttacg 1005 |||| ||||||| || | || |||||||| || ||| ||||||||||||| || || | Sbjct: 903 tggactttgcttacatgcttgatgtggatagtcttggtttcaatgtgaaggcgggctatg 962 Query: 1006 acggaactgttctgaagctgcgaattcccttccctaggcgtgctcaagacagaaaggatg 1065 | |||| ||||||||||||||| || ||||||||||||||||| || ||||| ||||||| Sbjct: 963 atggaagtgttctgaagctgcgtatccccttccctaggcgtgcacaggacaggaaggatg 1022 Query: 1066 ttaagacacttattgtggaaatgctacaggctgc 1099 ||||||||||||||||||||||||| || ||||| Sbjct: 1023 ttaagacacttattgtggaaatgctccaagctgc 1056 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Plus Query: 136 cgccgtcaacgctctcgcgactgctccgcc 165 ||||||||||||||||||| |||||||||| Sbjct: 102 cgccgtcaacgctctcgcggctgctccgcc 131
>dbj|AK104154.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B07, full insert sequence Length = 1263 Score = 821 bits (414), Expect = 0.0 Identities = 714/814 (87%) Strand = Plus / Plus Query: 286 cctcctcctcgccttctcagatggccgcgcctgccgatgccccgggaggatctgccgacg 345 |||||||||| | ||||||||||| |||||||||||||| ||||| ||||| || |||| Sbjct: 257 cctcctcctcctcctctcagatggcggcgcctgccgatgcaccgggcggatccgcggacg 316 Query: 346 cgttcgaggtgatccgcgctcaccaggtaaaagctgcccggcttcctcctgttgaagaaa 405 ||||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||| Sbjct: 317 cgttcgaggtgatccgcgctcaccaggaaaaagctgctcgacttcctccggttgaagaaa 376 Query: 406 tacgaaccattctggaccaaagtgtcagaggtgttctggctacccattctcaggaacatg 465 |||| |||||||||||||||||||| || ||||| || || ||||||||||||| |||| Sbjct: 377 tacggaccattctggaccaaagtgttaggggtgtccttgccacccattctcagggtcatg 436 Query: 466 tgggttatccatctggttcaatggttgattttgcgtgcgatcaagatggttcccccatat 525 | || ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 437 ttggctatccgtctggttcaatggttgattttgcatgtgatcaggatggttcccccatat 496 Query: 526 tagcagtgagtagtttagcagttcactcaaagaatctcacaggaagtactaaatgctcac 585 ||||||| |||||||||||| ||||||||||||||||| | | || | |||||||||| | Sbjct: 497 tagcagttagtagtttagcaattcactcaaagaatctctctgaaaatcctaaatgctcgc 556 Query: 586 ttttggttgccaaagatccagaggacagaacagatactgtaatcactgtatatggcgatg 645 || ||||||||||||| || |||||||||||||||||||| || ||||||||||| |||| Sbjct: 557 ttctggttgccaaagaccctgaggacagaacagatactgtgattactgtatatggtgatg 616 Query: 646 ctatacctgttcccgacgaagaaaaagatgccgtaagaactgcatatttacggagacacc 705 | | ||||||| | ||| ||||||||||||| ||| ||| |||||| ||||| ||||| | Sbjct: 617 ccacacctgtttcagaccaagaaaaagatgcagtacgaagtgcatacttacgaagacatc 676 Query: 706 ctgaggccttttgggttgactttggtgacttccgttttctgcacatcaaaccaaaagctg 765 ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct: 677 ctgaggcattttgggttgattttggtgacttccgttttctgcacatcaagccaaaagccg 736 Query: 766 tacgttacgtatctggggttgcaacagctatccttggctctggagaatttagtgcagctg 825 | || || || |||||||||||||| || |||||||| ||||||||||| ||||| |||| Sbjct: 737 tgcgatatgtgtctggggttgcaactgccatccttggttctggagaattcagtgctgctg 796 Query: 826 agttcaaggaagcaaaagtggatcccatatctcagttctccactcctattgcaggccaca 885 |||||||||| ||||||||||| || |||||||| ||||| || |||||| | |||||| Sbjct: 797 agttcaaggaggcaaaagtggacccaatatctcaattctcaacccctattacgagccaca 856 Query: 886 tgaacaaggatcatgctgatgatacaaagctcattgtgcaacactcaacctctgttaagg 945 |||| ||||||||| |||||||||||||||||||||||||| |||||||| |||| |||| Sbjct: 857 tgaataaggatcattctgatgatacaaagctcattgtgcaatactcaaccactgtcaagg 916 Query: 946 tggattttgcttctattgtggacgtggatagcctcggtatcaatgtgaaggctggttacg 1005 |||| ||||||| || | || |||||||| || ||| ||||||||||||| || || | Sbjct: 917 tggactttgcttacatgcttgatgtggatagtcttggtttcaatgtgaaggcgggctatg 976 Query: 1006 acggaactgttctgaagctgcgaattcccttccctaggcgtgctcaagacagaaaggatg 1065 | |||| ||||||||||||||| || ||||||||||||||||| || ||||| ||||||| Sbjct: 977 atggaagtgttctgaagctgcgtatccccttccctaggcgtgcacaggacaggaaggatg 1036 Query: 1066 ttaagacacttattgtggaaatgctacaggctgc 1099 ||||||||||||||||||||||||| || ||||| Sbjct: 1037 ttaagacacttattgtggaaatgctccaagctgc 1070 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Plus Query: 136 cgccgtcaacgctctcgcgactgctccgcc 165 ||||||||||||||||||| |||||||||| Sbjct: 116 cgccgtcaacgctctcgcggctgctccgcc 145
>dbj|AK072835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134F17, full insert sequence Length = 1421 Score = 821 bits (414), Expect = 0.0 Identities = 714/814 (87%) Strand = Plus / Plus Query: 286 cctcctcctcgccttctcagatggccgcgcctgccgatgccccgggaggatctgccgacg 345 |||||||||| | ||||||||||| |||||||||||||| ||||| ||||| || |||| Sbjct: 286 cctcctcctcctcctctcagatggcggcgcctgccgatgcaccgggcggatccgcggacg 345 Query: 346 cgttcgaggtgatccgcgctcaccaggtaaaagctgcccggcttcctcctgttgaagaaa 405 ||||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||| Sbjct: 346 cgttcgaggtgatccgcgctcaccaggaaaaagctgctcgacttcctccggttgaagaaa 405 Query: 406 tacgaaccattctggaccaaagtgtcagaggtgttctggctacccattctcaggaacatg 465 |||| |||||||||||||||||||| || ||||| || || ||||||||||||| |||| Sbjct: 406 tacggaccattctggaccaaagtgttaggggtgtccttgccacccattctcagggtcatg 465 Query: 466 tgggttatccatctggttcaatggttgattttgcgtgcgatcaagatggttcccccatat 525 | || ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 466 ttggctatccgtctggttcaatggttgattttgcatgtgatcaggatggttcccccatat 525 Query: 526 tagcagtgagtagtttagcagttcactcaaagaatctcacaggaagtactaaatgctcac 585 ||||||| |||||||||||| ||||||||||||||||| | | || | |||||||||| | Sbjct: 526 tagcagttagtagtttagcaattcactcaaagaatctctctgaaaatcctaaatgctcgc 585 Query: 586 ttttggttgccaaagatccagaggacagaacagatactgtaatcactgtatatggcgatg 645 || ||||||||||||| || |||||||||||||||||||| || ||||||||||| |||| Sbjct: 586 ttctggttgccaaagaccctgaggacagaacagatactgtgattactgtatatggtgatg 645 Query: 646 ctatacctgttcccgacgaagaaaaagatgccgtaagaactgcatatttacggagacacc 705 | | ||||||| | ||| ||||||||||||| ||| ||| |||||| ||||| ||||| | Sbjct: 646 ccacacctgtttcagaccaagaaaaagatgcagtacgaagtgcatacttacgaagacatc 705 Query: 706 ctgaggccttttgggttgactttggtgacttccgttttctgcacatcaaaccaaaagctg 765 ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct: 706 ctgaggcattttgggttgattttggtgacttccgttttctgcacatcaagccaaaagccg 765 Query: 766 tacgttacgtatctggggttgcaacagctatccttggctctggagaatttagtgcagctg 825 | || || || |||||||||||||| || |||||||| ||||||||||| ||||| |||| Sbjct: 766 tgcgatatgtgtctggggttgcaactgccatccttggttctggagaattcagtgctgctg 825 Query: 826 agttcaaggaagcaaaagtggatcccatatctcagttctccactcctattgcaggccaca 885 |||||||||| ||||||||||| || |||||||| ||||| || |||||| | |||||| Sbjct: 826 agttcaaggaggcaaaagtggacccaatatctcaattctcaacccctattacgagccaca 885 Query: 886 tgaacaaggatcatgctgatgatacaaagctcattgtgcaacactcaacctctgttaagg 945 |||| ||||||||| |||||||||||||||||||||||||| |||||||| |||| |||| Sbjct: 886 tgaataaggatcattctgatgatacaaagctcattgtgcaatactcaaccactgtcaagg 945 Query: 946 tggattttgcttctattgtggacgtggatagcctcggtatcaatgtgaaggctggttacg 1005 |||| ||||||| || | || |||||||| || ||| ||||||||||||| || || | Sbjct: 946 tggactttgcttacatgcttgatgtggatagtcttggtttcaatgtgaaggcgggctatg 1005 Query: 1006 acggaactgttctgaagctgcgaattcccttccctaggcgtgctcaagacagaaaggatg 1065 | |||| ||||||||||||||| || ||||||||||||||||| || ||||| ||||||| Sbjct: 1006 atggaagtgttctgaagctgcgtatccccttccctaggcgtgcacaggacaggaaggatg 1065 Query: 1066 ttaagacacttattgtggaaatgctacaggctgc 1099 ||||||||||||||||||||||||| || ||||| Sbjct: 1066 ttaagacacttattgtggaaatgctccaagctgc 1099 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Plus Query: 136 cgccgtcaacgctctcgcgactgctccgcc 165 ||||||||||||||||||| |||||||||| Sbjct: 145 cgccgtcaacgctctcgcggctgctccgcc 174
>dbj|AK121296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110F21, full insert sequence Length = 3078 Score = 710 bits (358), Expect = 0.0 Identities = 634/726 (87%) Strand = Plus / Plus Query: 374 aaaagctgcccggcttcctcctgttgaagaaatacgaaccattctggaccaaagtgtcag 433 ||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 2155 aaaagctgctcgacttcctccggttgaagaaatacggaccattctggaccaaagtgttag 2214 Query: 434 aggtgttctggctacccattctcaggaacatgtgggttatccatctggttcaatggttga 493 ||||| || || ||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 2215 gggtgtccttgccacccattctcagggtcatgttggctatccgtctggttcaatggttga 2274 Query: 494 ttttgcgtgcgatcaagatggttcccccatattagcagtgagtagtttagcagttcactc 553 |||||| || ||||| ||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 2275 ttttgcatgtgatcaggatggttcccccatattagcagttagtagtttagcaattcactc 2334 Query: 554 aaagaatctcacaggaagtactaaatgctcacttttggttgccaaagatccagaggacag 613 |||||||||| | | || | |||||||||| ||| ||||||||||||| || |||||||| Sbjct: 2335 aaagaatctctctgaaaatcctaaatgctcgcttctggttgccaaagaccctgaggacag 2394 Query: 614 aacagatactgtaatcactgtatatggcgatgctatacctgttcccgacgaagaaaaaga 673 |||||||||||| || ||||||||||| ||||| | ||||||| | ||| |||||||||| Sbjct: 2395 aacagatactgtgattactgtatatggtgatgccacacctgtttcagaccaagaaaaaga 2454 Query: 674 tgccgtaagaactgcatatttacggagacaccctgaggccttttgggttgactttggtga 733 ||| ||| ||| |||||| ||||| ||||| |||||||| ||||||||||| |||||||| Sbjct: 2455 tgcagtacgaagtgcatacttacgaagacatcctgaggcattttgggttgattttggtga 2514 Query: 734 cttccgttttctgcacatcaaaccaaaagctgtacgttacgtatctggggttgcaacagc 793 ||||||||||||||||||||| |||||||| || || || || |||||||||||||| || Sbjct: 2515 cttccgttttctgcacatcaagccaaaagccgtgcgatatgtgtctggggttgcaactgc 2574 Query: 794 tatccttggctctggagaatttagtgcagctgagttcaaggaagcaaaagtggatcccat 853 |||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| || || Sbjct: 2575 catccttggttctggagaattcagtgctgctgagttcaaggaggcaaaagtggacccaat 2634 Query: 854 atctcagttctccactcctattgcaggccacatgaacaaggatcatgctgatgatacaaa 913 |||||| ||||| || |||||| | |||||||||| ||||||||| ||||||||||||| Sbjct: 2635 atctcaattctcaacccctattacgagccacatgaataaggatcattctgatgatacaaa 2694 Query: 914 gctcattgtgcaacactcaacctctgttaaggtggattttgcttctattgtggacgtgga 973 ||||||||||||| |||||||| |||| |||||||| ||||||| || | || ||||| Sbjct: 2695 gctcattgtgcaatactcaaccactgtcaaggtggactttgcttacatgcttgatgtgga 2754 Query: 974 tagcctcggtatcaatgtgaaggctggttacgacggaactgttctgaagctgcgaattcc 1033 ||| || ||| ||||||||| ||| || || || |||| ||||||||||||||| || || Sbjct: 2755 tagtcttggtttcaatgtgagggcgggctatgatggaagtgttctgaagctgcgtatccc 2814 Query: 1034 cttccctaggcgtgctcaagacagaaaggatgttaagacacttattgtggaaatgctaca 1093 ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 2815 cttccctaggcgtgcacaggacaggaaggatgttaagacacttattgtggaaatgctcca 2874 Query: 1094 ggctgc 1099 ||||| Sbjct: 2875 agctgc 2880 Score = 101 bits (51), Expect = 7e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 303 cagatggccgcgcctgccgatgccccgggaggatctgccgacgcgttcgaggtgatccgc 362 |||||||| |||||||||||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 1215 cagatggcggcgcctgccgatgcaccgggcggatccgcggacgcgttcgaggtgatccgc 1274 Query: 363 gctcaccaggt 373 ||||||||||| Sbjct: 1275 gctcaccaggt 1285 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Plus Query: 136 cgccgtcaacgctctcgcgactgctccgcc 165 ||||||||||||||||||| |||||||||| Sbjct: 924 cgccgtcaacgctctcgcggctgctccgcc 953
>emb|CT832086.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA121E06, full insert sequence Length = 1417 Score = 696 bits (351), Expect = 0.0 Identities = 634/727 (87%), Gaps = 1/727 (0%) Strand = Plus / Plus Query: 374 aaaagctgcccggcttcctcctgttgaagaaatacgaaccattctggaccaaagtgtcag 433 ||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 494 aaaagctgctcgacttcctccggttgaagaaatacggaccattctggaccaaagtgttag 553 Query: 434 aggtgttctggctacccattctcaggaacatgtgggttatccatctggttcaatggttga 493 ||||| || || ||||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 554 gggtgtccttgccacccattctcagggtcatgttggctatccgtctggttcaatggttga 613 Query: 494 ttttgcgtgcgatcaagatggttcccccatattagcagtgagtagtttagcagttcactc 553 |||||| || ||||| ||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 614 ttttgcatgtgatcaggatggttcccccatattagcagttagtagtttagcaattcactc 673 Query: 554 aaagaatctcacaggaagtactaaatgctcacttttggttgccaaagatccagaggacag 613 |||||||||| | | || | |||||||||| ||| ||||||||||||| || |||||||| Sbjct: 674 aaagaatctctctgaaaatcctaaatgctcgcttctggttgccaaagaccctgaggacag 733 Query: 614 aacagatactgtaatcactgtatatggcgatgctatacctgttcccgacgaagaaaaaga 673 |||||||||||| || ||||||||||| ||||| | ||||||| | ||| |||||||||| Sbjct: 734 aacagatactgtgattactgtatatggtgatgccacacctgtttcagaccaagaaaaaga 793 Query: 674 tgccgtaagaactgcatatttacggagacaccctgaggcctttt-gggttgactttggtg 732 ||| ||| ||| |||||| ||||| ||||| |||||||| |||| ||||||| ||||||| Sbjct: 794 tgcagtacgaagtgcatacttacgaagacatcctgaggcattttggggttgattttggtg 853 Query: 733 acttccgttttctgcacatcaaaccaaaagctgtacgttacgtatctggggttgcaacag 792 |||||||||||||||||||||| |||||||| || || || || |||||||||||||| | Sbjct: 854 acttccgttttctgcacatcaagccaaaagccgtgcgatatgtgtctggggttgcaactg 913 Query: 793 ctatccttggctctggagaatttagtgcagctgagttcaaggaagcaaaagtggatccca 852 | |||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| || | Sbjct: 914 ccatccttggttctggagaattcagtgctgctgagttcaaggaggcaaaagtggacccaa 973 Query: 853 tatctcagttctccactcctattgcaggccacatgaacaaggatcatgctgatgatacaa 912 ||||||| ||||| || |||||| | |||||||||| ||||||||| |||||||||||| Sbjct: 974 tatctcaattctcaacccctattacgagccacatgaataaggatcattctgatgatacaa 1033 Query: 913 agctcattgtgcaacactcaacctctgttaaggtggattttgcttctattgtggacgtgg 972 |||||||||||||| |||||||| |||| |||||||| ||||||| || | || |||| Sbjct: 1034 agctcattgtgcaatactcaaccactgtcaaggtggactttgcttacatgcttgatgtgg 1093 Query: 973 atagcctcggtatcaatgtgaaggctggttacgacggaactgttctgaagctgcgaattc 1032 |||| || ||| ||||||||||||| || || || |||| ||||||||||||||| || | Sbjct: 1094 atagtcttggtttcaatgtgaaggcgggctatgatggaagtgttctgaagctgcgtatcc 1153 Query: 1033 ccttccctaggcgtgctcaagacagaaaggatgttaagacacttattgtggaaatgctac 1092 |||||||||||||||| || |||| |||||||||||||||||||||||||||||||| | Sbjct: 1154 ccttccctaggcgtgcacaggacatgaaggatgttaagacacttattgtggaaatgctcc 1213 Query: 1093 aggctgc 1099 | ||||| Sbjct: 1214 aagctgc 1220 Score = 107 bits (54), Expect = 1e-19 Identities = 69/74 (93%) Strand = Plus / Plus Query: 300 tctcagatggccgcgcctgccgatgccccgggaggatctgccgacgcgttcgaggtgatc 359 ||||||||||| |||||||||||||| ||||| ||||| || |||||||||||||||||| Sbjct: 243 tctcagatggcggcgcctgccgatgcaccgggcggatccgcggacgcgttcgaggtgatc 302 Query: 360 cgcgctcaccaggt 373 |||||||||||||| Sbjct: 303 cgcgctcaccaggt 316 Score = 48.1 bits (24), Expect = 0.089 Identities = 27/28 (96%) Strand = Plus / Plus Query: 138 ccgtcaacgctctcgcgactgctccgcc 165 ||||||||||||||||| |||||||||| Sbjct: 99 ccgtcaacgctctcgcggctgctccgcc 126
>gb|AY109869.1| Zea mays CL39903_1 mRNA sequence Length = 1027 Score = 688 bits (347), Expect = 0.0 Identities = 654/758 (86%) Strand = Plus / Minus Query: 342 gacgcgttcgaggtgatccgcgctcaccaggtaaaagctgcccggcttcctcctgttgaa 401 |||||||||||||||||||||| |||||||| |||||||| || ||| |||| |||||| Sbjct: 1000 gacgcgttcgaggtgatccgcgttcaccaggcaaaagctgttcgtctttctccagttgaa 941 Query: 402 gaaatacgaaccattctggaccaaagtgtcagaggtgttctggctacccattctcaggaa 461 |||||||| |||||| |||||| |||||||||| ||||||| ||||||||||||||||| Sbjct: 940 gaaatacggaccattatggaccgaagtgtcagatgtgttcttgctacccattctcaggat 881 Query: 462 catgtgggttatccatctggttcaatggttgattttgcgtgcgatcaagatggttccccc 521 |||| |||||||||||||||||||||||||||||||| || ||||| ||||||| |||| Sbjct: 880 catgctggttatccatctggttcaatggttgattttgcatgtgatcaggatggttacccc 821 Query: 522 atattagcagtgagtagtttagcagttcactcaaagaatctcacaggaagtactaaatgc 581 |||||||||||||||||||||||||| || |||||||||||| | |||| | |||||||| Sbjct: 820 atattagcagtgagtagtttagcagtccattcaaagaatctctctggaaatcctaaatgc 761 Query: 582 tcacttttggttgccaaagatccagaggacagaacagatactgtaatcactgtatatggc 641 |||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 760 tcacttcttgttgccaaagatcctgaggacagaactgatactgtaatcactgtatatggc 701 Query: 642 gatgctatacctgttcccgacgaagaaaaagatgccgtaagaactgcatatttacggaga 701 || ||| | |||||| | ||||||| ||| | || |||| ||| || |||| || Sbjct: 700 gacgctgttcctgtttctgacgaagnnnnngattcagtgagaagtgcttacctacgcagg 641 Query: 702 caccctgaggccttttgggttgactttggtgacttccgttttctgcacatcaaaccaaaa 761 |||||||| || || ||||||||||||||||||||| |||| |||||||||||||| ||| Sbjct: 640 caccctgatgctttctgggttgactttggtgacttcagtttcctgcacatcaaacctaaa 581 Query: 762 gctgtacgttacgtatctggggttgcaacagctatccttggctctggagaatttagtgca 821 ||||| || || |||||||| |||||||| ||| ||||||| ||||||||||| | || Sbjct: 580 gctgtgcgctatgtatctggcgttgcaactgctctccttggttctggagaattcaatgtt 521 Query: 822 gctgagttcaaggaagcaaaagtggatcccatatctcagttctccactcctattgcaggc 881 || |||| |||||||||||||| ||||| |||||||| ||||| |||||||| || || Sbjct: 520 gcagagtataaggaagcaaaagttgatccaatatctcaattctcaactcctatcacaagc 461 Query: 882 cacatgaacaaggatcatgctgatgatacaaagctcattgtgcaacactcaacctctgtt 941 || ||||||||||||||||| |||||||||||||||||||||||||||| || |||| Sbjct: 460 catatgaacaaggatcatgccaatgatacaaagctcattgtgcaacactccactactgtc 401 Query: 942 aaggtggattttgcttctattgtggacgtggatagcctcggtatcaatgtgaaggctggt 1001 |||||||||||||||| ||| |||||||||| ||||| ||| | ||||||||||||||| Sbjct: 400 aaggtggattttgcttatatgctggacgtggacagccttggttttaatgtgaaggctggt 341 Query: 1002 tacgacggaactgttctgaagctgcgaattcccttccctaggcgtgctcaagacagaaag 1061 || || |||| |||||||||| || |||| |||||||| || | || |||||||| ||| Sbjct: 340 tatgatggaagtgttctgaagttgagaatccccttcccaagacaggcgcaagacaggaag 281 Query: 1062 gatgttaagacacttattgtggaaatgctacaggctgc 1099 |||||||||||||| |||||||||||||| || ||||| Sbjct: 280 gatgttaagacactaattgtggaaatgctccaagctgc 243
>emb|CT828558.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA003K07, full insert sequence Length = 1190 Score = 428 bits (216), Expect = e-116 Identities = 381/436 (87%) Strand = Plus / Plus Query: 664 aagaaaaagatgccgtaagaactgcatatttacggagacaccctgaggccttttgggttg 723 ||||||||||||| ||| ||| |||||| ||||| ||||| |||||||| |||||||||| Sbjct: 561 aagaaaaagatgcagtacgaagtgcatacttacgaagacatcctgaggcattttgggttg 620 Query: 724 actttggtgacttccgttttctgcacatcaaaccaaaagctgtacgttacgtatctgggg 783 | ||||||||||||||||||||||||||||| |||||||| || || || || ||||||| Sbjct: 621 attttggtgacttccgttttctgcacatcaagccaaaagccgtgcgatatgtgtctgggg 680 Query: 784 ttgcaacagctatccttggctctggagaatttagtgcagctgagttcaaggaagcaaaag 843 ||||||| || |||||||| ||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 681 ttgcaactgccatccttggttctggagaattcagtgctgctgagttcaaggaggcaaaag 740 Query: 844 tggatcccatatctcagttctccactcctattgcaggccacatgaacaaggatcatgctg 903 |||| || |||||||| ||||| || |||||| | |||||||||| ||||||||| ||| Sbjct: 741 tggacccaatatctcaattctcaacccctattacgagccacatgaataaggatcattctg 800 Query: 904 atgatacaaagctcattgtgcaacactcaacctctgttaaggtggattttgcttctattg 963 ||||||||||||||||||||||| |||||||| |||| |||||||| ||||||| || Sbjct: 801 atgatacaaagctcattgtgcaatactcaaccactgtcaaggtggactttgcttacatgc 860 Query: 964 tggacgtggatagcctcggtatcaatgtgaaggctggttacgacggaactgttctgaagc 1023 | || |||||||| || ||| ||||||||||||| || || || |||| ||||||||||| Sbjct: 861 ttgatgtggatagtcttggtttcaatgtgaaggcgggctatgatggaagtgttctgaagc 920 Query: 1024 tgcgaattcccttccctaggcgtgctcaagacagaaaggatgttaagacacttattgtgg 1083 |||| || ||||||||||||||||| || ||||| ||||||||||||||||||||||||| Sbjct: 921 tgcgtatccccttccctaggcgtgcacaggacaggaaggatgttaagacacttattgtgg 980 Query: 1084 aaatgctacaggctgc 1099 ||||||| || ||||| Sbjct: 981 aaatgctccaagctgc 996 Score = 396 bits (200), Expect = e-107 Identities = 317/356 (89%) Strand = Plus / Plus Query: 300 tctcagatggccgcgcctgccgatgccccgggaggatctgccgacgcgttcgaggtgatc 359 ||||||||||| |||||||||||||| ||||| ||||| || |||||||||||||||||| Sbjct: 73 tctcagatggcggcgcctgccgatgcaccgggcggatccgcggacgcgttcgaggtgatc 132 Query: 360 cgcgctcaccaggtaaaagctgcccggcttcctcctgttgaagaaatacgaaccattctg 419 ||||||||||||| ||||||||| || |||||||| |||||||||||||| ||||||||| Sbjct: 133 cgcgctcaccaggaaaaagctgctcgacttcctccggttgaagaaatacggaccattctg 192 Query: 420 gaccaaagtgtcagaggtgttctggctacccattctcaggaacatgtgggttatccatct 479 ||||||||||| || ||||| || || ||||||||||||| ||||| || ||||| ||| Sbjct: 193 gaccaaagtgttaggggtgtccttgccacccattctcagggtcatgttggctatccgtct 252 Query: 480 ggttcaatggttgattttgcgtgcgatcaagatggttcccccatattagcagtgagtagt 539 |||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||| Sbjct: 253 ggttcaatggttgattttgcatgtgatcaggatggttcccccatattagcagttagtagt 312 Query: 540 ttagcagttcactcaaagaatctcacaggaagtactaaatgctcacttttggttgccaaa 599 |||||| ||||||||||||||||| | | || | |||||||||| ||| ||||||||||| Sbjct: 313 ttagcaattcactcaaagaatctctctgaaaatcctaaatgctcgcttctggttgccaaa 372 Query: 600 gatccagaggacagaacagatactgtaatcactgtatatggcgatgctatacctgt 655 || || |||||||||||||||||||| || ||||||||||| ||||| | |||||| Sbjct: 373 gaccctgaggacagaacagatactgtgattactgtatatggtgatgccacacctgt 428
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 127 bits (64), Expect = 1e-25 Identities = 88/96 (91%) Strand = Plus / Minus Query: 462 catgtgggttatccatctggttcaatggttgattttgcgtgcgatcaagatggttccccc 521 ||||| || ||||| ||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 23143873 catgttggctatccgtctggttcaatggttgattttgcatgtgatcaggatggttccccc 23143814 Query: 522 atattagcagtgagtagtttagcagttcactcaaag 557 ||||||||||| |||||||||||| ||||||||||| Sbjct: 23143813 atattagcagttagtagtttagcaattcactcaaag 23143778 Score = 103 bits (52), Expect = 2e-18 Identities = 82/92 (89%) Strand = Plus / Minus Query: 719 ggttgactttggtgacttccgttttctgcacatcaaaccaaaagctgtacgttacgtatc 778 |||||| ||||||||||||||||||||||||||||| |||||||| || || || || || Sbjct: 23143099 ggttgattttggtgacttccgttttctgcacatcaagccaaaagccgtgcgatatgtgtc 23143040 Query: 779 tggggttgcaacagctatccttggctctggag 810 |||||||||||| || |||||||| ||||||| Sbjct: 23143039 tggggttgcaactgccatccttggttctggag 23143008 Score = 101 bits (51), Expect = 7e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 303 cagatggccgcgcctgccgatgccccgggaggatctgccgacgcgttcgaggtgatccgc 362 |||||||| |||||||||||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 23144988 cagatggcggcgcctgccgatgcaccgggcggatccgcggacgcgttcgaggtgatccgc 23144929 Query: 363 gctcaccaggt 373 ||||||||||| Sbjct: 23144928 gctcaccaggt 23144918 Score = 99.6 bits (50), Expect = 3e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 374 aaaagctgcccggcttcctcctgttgaagaaatacgaaccattctggaccaaagtgtcag 433 ||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 23144048 aaaagctgctcgacttcctccggttgaagaaatacggaccattctggaccaaagtgttag 23143989 Query: 434 aggtgttctggctacccattctcagg 459 ||||| || || ||||||||||||| Sbjct: 23143988 gggtgtccttgccacccattctcagg 23143963 Score = 91.7 bits (46), Expect = 7e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 880 gccacatgaacaaggatcatgctgatgatacaaagctcattgtgcaacactcaacctctg 939 |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 23142593 gccacatgaataaggatcattctgatgatacaaagctcattgtgcaatactcaaccactg 23142534 Query: 940 ttaagg 945 | |||| Sbjct: 23142533 tcaagg 23142528 Score = 91.7 bits (46), Expect = 7e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 574 ctaaatgctcacttttggttgccaaagatccagaggacagaacagatactgtaatcactg 633 |||||||||| ||| ||||||||||||| || |||||||||||||||||||| || |||| Sbjct: 23143455 ctaaatgctcgcttctggttgccaaagaccctgaggacagaacagatactgtgattactg 23143396 Query: 634 tatatggcgatgctatacctgt 655 ||||||| ||||| | |||||| Sbjct: 23143395 tatatggtgatgccacacctgt 23143374 Score = 69.9 bits (35), Expect = 2e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 809 agaatttagtgcagctgagttcaaggaagcaaaagtggatcccatatctcagttctccac 868 |||||| ||||| |||||||||||||| ||||||||||| || |||||||| ||||| || Sbjct: 23142762 agaattcagtgctgctgagttcaaggaggcaaaagtggacccaatatctcaattctcaac 23142703 Query: 869 tcctatt 875 |||||| Sbjct: 23142702 ccctatt 23142696 Score = 61.9 bits (31), Expect = 6e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1061 ggatgttaagacacttattgtggaaatgctacaggctgc 1099 |||||||||||||||||||||||||||||| || ||||| Sbjct: 23141010 ggatgttaagacacttattgtggaaatgctccaagctgc 23140972 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1008 ggaactgttctgaagctgcgaattcccttccctaggcgtgctcaagacag 1057 |||| ||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 23141209 ggaagtgttctgaagctgcgtatccccttccctaggcgtgcacaggacag 23141160 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 664 aagaaaaagatgccgtaagaactgcatatttacggagacaccctgaggccttttgggt 721 ||||||||||||| ||| ||| |||||| ||||| ||||| |||||||| |||||||| Sbjct: 23143241 aagaaaaagatgcagtacgaagtgcatacttacgaagacatcctgaggcattttgggt 23143184 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Minus Query: 136 cgccgtcaacgctctcgcgactgctccgcc 165 ||||||||||||||||||| |||||||||| Sbjct: 23145279 cgccgtcaacgctctcgcggctgctccgcc 23145250 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1141 gaaggcggtggcggtggcggcg 1162 |||||||||||||||||||||| Sbjct: 16956662 gaaggcggtggcggtggcggcg 16956683
>dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1562_B11 Length = 112144 Score = 127 bits (64), Expect = 1e-25 Identities = 88/96 (91%) Strand = Plus / Minus Query: 462 catgtgggttatccatctggttcaatggttgattttgcgtgcgatcaagatggttccccc 521 ||||| || ||||| ||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 6787 catgttggctatccgtctggttcaatggttgattttgcatgtgatcaggatggttccccc 6728 Query: 522 atattagcagtgagtagtttagcagttcactcaaag 557 ||||||||||| |||||||||||| ||||||||||| Sbjct: 6727 atattagcagttagtagtttagcaattcactcaaag 6692 Score = 103 bits (52), Expect = 2e-18 Identities = 82/92 (89%) Strand = Plus / Minus Query: 719 ggttgactttggtgacttccgttttctgcacatcaaaccaaaagctgtacgttacgtatc 778 |||||| ||||||||||||||||||||||||||||| |||||||| || || || || || Sbjct: 6013 ggttgattttggtgacttccgttttctgcacatcaagccaaaagccgtgcgatatgtgtc 5954 Query: 779 tggggttgcaacagctatccttggctctggag 810 |||||||||||| || |||||||| ||||||| Sbjct: 5953 tggggttgcaactgccatccttggttctggag 5922 Score = 101 bits (51), Expect = 7e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 303 cagatggccgcgcctgccgatgccccgggaggatctgccgacgcgttcgaggtgatccgc 362 |||||||| |||||||||||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 7902 cagatggcggcgcctgccgatgcaccgggcggatccgcggacgcgttcgaggtgatccgc 7843 Query: 363 gctcaccaggt 373 ||||||||||| Sbjct: 7842 gctcaccaggt 7832 Score = 99.6 bits (50), Expect = 3e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 374 aaaagctgcccggcttcctcctgttgaagaaatacgaaccattctggaccaaagtgtcag 433 ||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 6962 aaaagctgctcgacttcctccggttgaagaaatacggaccattctggaccaaagtgttag 6903 Query: 434 aggtgttctggctacccattctcagg 459 ||||| || || ||||||||||||| Sbjct: 6902 gggtgtccttgccacccattctcagg 6877 Score = 91.7 bits (46), Expect = 7e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 880 gccacatgaacaaggatcatgctgatgatacaaagctcattgtgcaacactcaacctctg 939 |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 5507 gccacatgaataaggatcattctgatgatacaaagctcattgtgcaatactcaaccactg 5448 Query: 940 ttaagg 945 | |||| Sbjct: 5447 tcaagg 5442 Score = 91.7 bits (46), Expect = 7e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 574 ctaaatgctcacttttggttgccaaagatccagaggacagaacagatactgtaatcactg 633 |||||||||| ||| ||||||||||||| || |||||||||||||||||||| || |||| Sbjct: 6369 ctaaatgctcgcttctggttgccaaagaccctgaggacagaacagatactgtgattactg 6310 Query: 634 tatatggcgatgctatacctgt 655 ||||||| ||||| | |||||| Sbjct: 6309 tatatggtgatgccacacctgt 6288 Score = 69.9 bits (35), Expect = 2e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 809 agaatttagtgcagctgagttcaaggaagcaaaagtggatcccatatctcagttctccac 868 |||||| ||||| |||||||||||||| ||||||||||| || |||||||| ||||| || Sbjct: 5676 agaattcagtgctgctgagttcaaggaggcaaaagtggacccaatatctcaattctcaac 5617 Query: 869 tcctatt 875 |||||| Sbjct: 5616 ccctatt 5610 Score = 61.9 bits (31), Expect = 6e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1061 ggatgttaagacacttattgtggaaatgctacaggctgc 1099 |||||||||||||||||||||||||||||| || ||||| Sbjct: 3924 ggatgttaagacacttattgtggaaatgctccaagctgc 3886 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1008 ggaactgttctgaagctgcgaattcccttccctaggcgtgctcaagacag 1057 |||| ||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 4123 ggaagtgttctgaagctgcgtatccccttccctaggcgtgcacaggacag 4074 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 664 aagaaaaagatgccgtaagaactgcatatttacggagacaccctgaggccttttgggt 721 ||||||||||||| ||| ||| |||||| ||||| ||||| |||||||| |||||||| Sbjct: 6155 aagaaaaagatgcagtacgaagtgcatacttacgaagacatcctgaggcattttgggt 6098 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Minus Query: 136 cgccgtcaacgctctcgcgactgctccgcc 165 ||||||||||||||||||| |||||||||| Sbjct: 8193 cgccgtcaacgctctcgcggctgctccgcc 8164
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 127 bits (64), Expect = 1e-25 Identities = 88/96 (91%) Strand = Plus / Minus Query: 462 catgtgggttatccatctggttcaatggttgattttgcgtgcgatcaagatggttccccc 521 ||||| || ||||| ||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 88057 catgttggctatccgtctggttcaatggttgattttgcatgtgatcaggatggttccccc 87998 Query: 522 atattagcagtgagtagtttagcagttcactcaaag 557 ||||||||||| |||||||||||| ||||||||||| Sbjct: 87997 atattagcagttagtagtttagcaattcactcaaag 87962 Score = 103 bits (52), Expect = 2e-18 Identities = 82/92 (89%) Strand = Plus / Minus Query: 719 ggttgactttggtgacttccgttttctgcacatcaaaccaaaagctgtacgttacgtatc 778 |||||| ||||||||||||||||||||||||||||| |||||||| || || || || || Sbjct: 87283 ggttgattttggtgacttccgttttctgcacatcaagccaaaagccgtgcgatatgtgtc 87224 Query: 779 tggggttgcaacagctatccttggctctggag 810 |||||||||||| || |||||||| ||||||| Sbjct: 87223 tggggttgcaactgccatccttggttctggag 87192 Score = 101 bits (51), Expect = 7e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 303 cagatggccgcgcctgccgatgccccgggaggatctgccgacgcgttcgaggtgatccgc 362 |||||||| |||||||||||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 89172 cagatggcggcgcctgccgatgcaccgggcggatccgcggacgcgttcgaggtgatccgc 89113 Query: 363 gctcaccaggt 373 ||||||||||| Sbjct: 89112 gctcaccaggt 89102 Score = 99.6 bits (50), Expect = 3e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 374 aaaagctgcccggcttcctcctgttgaagaaatacgaaccattctggaccaaagtgtcag 433 ||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| || Sbjct: 88232 aaaagctgctcgacttcctccggttgaagaaatacggaccattctggaccaaagtgttag 88173 Query: 434 aggtgttctggctacccattctcagg 459 ||||| || || ||||||||||||| Sbjct: 88172 gggtgtccttgccacccattctcagg 88147 Score = 91.7 bits (46), Expect = 7e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 880 gccacatgaacaaggatcatgctgatgatacaaagctcattgtgcaacactcaacctctg 939 |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 86777 gccacatgaataaggatcattctgatgatacaaagctcattgtgcaatactcaaccactg 86718 Query: 940 ttaagg 945 | |||| Sbjct: 86717 tcaagg 86712 Score = 91.7 bits (46), Expect = 7e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 574 ctaaatgctcacttttggttgccaaagatccagaggacagaacagatactgtaatcactg 633 |||||||||| ||| ||||||||||||| || |||||||||||||||||||| || |||| Sbjct: 87639 ctaaatgctcgcttctggttgccaaagaccctgaggacagaacagatactgtgattactg 87580 Query: 634 tatatggcgatgctatacctgt 655 ||||||| ||||| | |||||| Sbjct: 87579 tatatggtgatgccacacctgt 87558 Score = 69.9 bits (35), Expect = 2e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 809 agaatttagtgcagctgagttcaaggaagcaaaagtggatcccatatctcagttctccac 868 |||||| ||||| |||||||||||||| ||||||||||| || |||||||| ||||| || Sbjct: 86946 agaattcagtgctgctgagttcaaggaggcaaaagtggacccaatatctcaattctcaac 86887 Query: 869 tcctatt 875 |||||| Sbjct: 86886 ccctatt 86880 Score = 61.9 bits (31), Expect = 6e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1061 ggatgttaagacacttattgtggaaatgctacaggctgc 1099 |||||||||||||||||||||||||||||| || ||||| Sbjct: 85194 ggatgttaagacacttattgtggaaatgctccaagctgc 85156 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1008 ggaactgttctgaagctgcgaattcccttccctaggcgtgctcaagacag 1057 |||| ||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 85393 ggaagtgttctgaagctgcgtatccccttccctaggcgtgcacaggacag 85344 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 664 aagaaaaagatgccgtaagaactgcatatttacggagacaccctgaggccttttgggt 721 ||||||||||||| ||| ||| |||||| ||||| ||||| |||||||| |||||||| Sbjct: 87425 aagaaaaagatgcagtacgaagtgcatacttacgaagacatcctgaggcattttgggt 87368 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Minus Query: 136 cgccgtcaacgctctcgcgactgctccgcc 165 ||||||||||||||||||| |||||||||| Sbjct: 89463 cgccgtcaacgctctcgcggctgctccgcc 89434
>dbj|AK107962.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-C10, full insert sequence Length = 509 Score = 111 bits (56), Expect = 7e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 286 cctcctcctcgccttctcagatggccgcgcctgccgatgccccgggaggatctgccgacg 345 |||||||||| | ||||||||||| |||||||||||||| ||||| ||||| || |||| Sbjct: 191 cctcctcctcctcctctcagatggcggcgcctgccgatgcaccgggcggatccgcggacg 250 Query: 346 cgttcgaggtgatccgcgctcaccaggt 373 |||||||||||||||||||||||||||| Sbjct: 251 cgttcgaggtgatccgcgctcaccaggt 278 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Plus Query: 136 cgccgtcaacgctctcgcgactgctccgcc 165 ||||||||||||||||||| |||||||||| Sbjct: 50 cgccgtcaacgctctcgcggctgctccgcc 79
>gb|AF139187.1|AF139187 Pisum sativum root border cell-specific protein (BRD13) mRNA, complete cds Length = 1334 Score = 75.8 bits (38), Expect = 4e-10 Identities = 125/154 (81%) Strand = Plus / Plus Query: 714 ttttgggttgactttggtgacttccgttttctgcacatcaaaccaaaagctgtacgttac 773 |||||||||||||| || |||||||| ||| | | ||| ||||||||| |||||| | | Sbjct: 582 ttttgggttgacttcggagacttccgatttgtacgcattgaaccaaaagttgtacgattc 641 Query: 774 gtatctggggttgcaacagctatccttggctctggagaatttagtgcagctgagttcaag 833 || || || ||||| |||||| | | || || ||||| ||||||| || ||||||||| Sbjct: 642 gtgtcaggtgttgctacagctttgttaggatcaggagagtttagtggagatgagttcaaa 701 Query: 834 gaagcaaaagtggatcccatatctcagttctcca 867 |||||||||||||||||||||||||| |||| Sbjct: 702 tctgcaaaagtggatcccatatctcagttttcca 735
>gb|DQ268840.1| Solanum tuberosum clone 130E11 root border cell-specific protein-like protein mRNA, complete cds Length = 1252 Score = 71.9 bits (36), Expect = 6e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 1020 aagctgcgaattcccttccctaggcgtgctcaagacagaaaggatgttaagacacttatt 1079 ||||| ||| |||| |||||||| |||||| ||||||||||||||| ||| |||||||| Sbjct: 952 aagcttcgagttccattccctagacgtgctgtagacagaaaggatgtgaaggcacttatt 1011 Query: 1080 gtggaaatgctacagg 1095 || |||||||| |||| Sbjct: 1012 gttgaaatgcttcagg 1027 Score = 50.1 bits (25), Expect = 0.023 Identities = 34/37 (91%) Strand = Plus / Plus Query: 702 caccctgaggccttttgggttgactttggtgacttcc 738 |||||| |||| |||||||||||||||||||| |||| Sbjct: 634 caccctaaggcattttgggttgactttggtgatttcc 670
>ref|NM_111260.3| Arabidopsis thaliana unknown protein (AT3G03890) mRNA, complete cds Length = 1654 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1050 caagacagaaaggatgttaagacacttattgtggaaatgctacaggctgc 1099 ||||||||||||||||| |||||| | |||||||||||||| || ||||| Sbjct: 1392 caagacagaaaggatgtaaagacattgattgtggaaatgcttcaagctgc 1441 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 780 ggggttgcaacagctatccttggctctggagaatttag 817 ||||||||||| ||| | ||||| |||||||||||||| Sbjct: 1122 ggggttgcaactgcttttcttggatctggagaatttag 1159 Score = 42.1 bits (21), Expect = 5.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 467 gggttatccatctggttcaatggttgattttgc 499 ||||||||| || || ||||||||||||||||| Sbjct: 809 gggttatccttcagggtcaatggttgattttgc 841
>gb|AY085802.1| Arabidopsis thaliana clone 18355 mRNA, complete sequence Length = 1194 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1050 caagacagaaaggatgttaagacacttattgtggaaatgctacaggctgc 1099 ||||||||||||||||| |||||| | |||||||||||||| || ||||| Sbjct: 935 caagacagaaaggatgtaaagacattgattgtggaaatgcttcaagctgc 984 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 780 ggggttgcaacagctatccttggctctggagaatttag 817 ||||||||||| ||| | ||||| |||||||||||||| Sbjct: 665 ggggttgcaactgcttttcttggatctggagaatttag 702 Score = 42.1 bits (21), Expect = 5.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 467 gggttatccatctggttcaatggttgattttgc 499 ||||||||| || || ||||||||||||||||| Sbjct: 352 gggttatccttcagggtcaatggttgattttgc 384
>emb|BX822131.1|CNS0A73M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1050 caagacagaaaggatgttaagacacttattgtggaaatgctacaggctgc 1099 ||||||||||||||||| |||||| | |||||||||||||| || ||||| Sbjct: 1391 caagacagaaaggatgtaaagacattgattgtggaaatgcttcaagctgc 1440 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 780 ggggttgcaacagctatccttggctctggagaatttag 817 ||||||||||| ||| | ||||| |||||||||||||| Sbjct: 1121 ggggttgcaactgcttttcttggatctggagaatttag 1158 Score = 42.1 bits (21), Expect = 5.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 467 gggttatccatctggttcaatggttgattttgc 499 ||||||||| || || ||||||||||||||||| Sbjct: 809 gggttatccttcagggtcaatggttgattttgc 841
>emb|BX842171.1|CNS09YEM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL15ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1050 caagacagaaaggatgttaagacacttattgtggaaatgctacaggctgc 1099 ||||||||||||||||| |||||| | |||||||||||||| || ||||| Sbjct: 911 caagacagaaaggatgtaaagacattgattgtggaaatgcttcaagctgc 960 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 780 ggggttgcaacagctatccttggctctggagaatttag 817 ||||||||||| ||| | ||||| |||||||||||||| Sbjct: 641 ggggttgcaactgcttttcttggatctggagaatttag 678 Score = 42.1 bits (21), Expect = 5.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 467 gggttatccatctggttcaatggttgattttgc 499 ||||||||| || || ||||||||||||||||| Sbjct: 326 gggttatccttcagggtcaatggttgattttgc 358
>ref|NM_001072370.1| Oryza sativa (japonica cultivar-group) Os11g0167300 (Os11g0167300) mRNA, complete cds Length = 3018 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1140 ggaaggcggtggcggtggcggcg 1162 ||||||||||||||||||||||| Sbjct: 27 ggaaggcggtggcggtggcggcg 5
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1140 ggaaggcggtggcggtggcggcg 1162 ||||||||||||||||||||||| Sbjct: 80104 ggaaggcggtggcggtggcggcg 80082
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1140 ggaaggcggtggcggtggcggcg 1162 ||||||||||||||||||||||| Sbjct: 3234881 ggaaggcggtggcggtggcggcg 3234903 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1143 aggcggtggcggtggcggcgtc 1164 |||||||||||||||||||||| Sbjct: 24297835 aggcggtggcggtggcggcgtc 24297856
>dbj|AK101314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034B16, full insert sequence Length = 3119 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1140 ggaaggcggtggcggtggcggcg 1162 ||||||||||||||||||||||| Sbjct: 29 ggaaggcggtggcggtggcggcg 7
>dbj|AK071335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090O08, full insert sequence Length = 3021 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1140 ggaaggcggtggcggtggcggcg 1162 ||||||||||||||||||||||| Sbjct: 29 ggaaggcggtggcggtggcggcg 7
>ref|NM_001066150.1| Oryza sativa (japonica cultivar-group) Os07g0472900 (Os07g0472900) mRNA, complete cds Length = 489 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1141 gaaggcggtggcggtggcggcg 1162 |||||||||||||||||||||| Sbjct: 26 gaaggcggtggcggtggcggcg 5
>ref|NM_001051249.1| Oryza sativa (japonica cultivar-group) Os01g0833600 (Os01g0833600) mRNA, complete cds Length = 519 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1140 ggaaggcggtggcggtggcggc 1161 |||||||||||||||||||||| Sbjct: 116 ggaaggcggtggcggtggcggc 137
>gb|AC185337.4| Nasonia vitripennis BAC NV_Bb-66L02 (Clemson University Genomics Nasonia vitripennis BAC Library) complete sequence Length = 128561 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtcc 1165 |||||||||||||||||||||| Sbjct: 113650 ggcggtggcggtggcggcgtcc 113629
>emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o19, COMPLETE SEQUENCE Length = 121343 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Minus Query: 826 agttcaaggaagcaaaagtggatcccatat 855 |||| |||||||||||||||| |||||||| Sbjct: 72371 agttaaaggaagcaaaagtggctcccatat 72342
>ref|NM_180178.1| Arabidopsis thaliana unknown protein (AT3G03890) mRNA, complete cds Length = 1223 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 780 ggggttgcaacagctatccttggctctggagaatttag 817 ||||||||||| ||| | ||||| |||||||||||||| Sbjct: 671 ggggttgcaactgcttttcttggatctggagaatttag 708 Score = 42.1 bits (21), Expect = 5.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 467 gggttatccatctggttcaatggttgattttgc 499 ||||||||| || || ||||||||||||||||| Sbjct: 358 gggttatccttcagggtcaatggttgattttgc 390
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1143 aggcggtggcggtggcggcgtc 1164 |||||||||||||||||||||| Sbjct: 98944 aggcggtggcggtggcggcgtc 98965
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1143 aggcggtggcggtggcggcgtc 1164 |||||||||||||||||||||| Sbjct: 111154 aggcggtggcggtggcggcgtc 111133
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1143 aggcggtggcggtggcggcgtc 1164 |||||||||||||||||||||| Sbjct: 13289483 aggcggtggcggtggcggcgtc 13289504
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1140 ggaaggcggtggcggtggcggc 1161 |||||||||||||||||||||| Sbjct: 35686930 ggaaggcggtggcggtggcggc 35686909 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtcc 1165 |||||||||||||||||||||| Sbjct: 38319789 ggcggtggcggtggcggcgtcc 38319810 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1138 ctggaaggcggtggcggtggcggcg 1162 ||||| ||||||||||||||||||| Sbjct: 332527 ctggagggcggtggcggtggcggcg 332551
>gb|AY052741.1| Arabidopsis thaliana AT3g03890/F20H23_6 mRNA, complete cds Length = 918 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 780 ggggttgcaacagctatccttggctctggagaatttag 817 ||||||||||| ||| | ||||| |||||||||||||| Sbjct: 634 ggggttgcaactgcttttcttggatctggagaatttag 671 Score = 42.1 bits (21), Expect = 5.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 467 gggttatccatctggttcaatggttgattttgc 499 ||||||||| || || ||||||||||||||||| Sbjct: 321 gggttatccttcagggtcaatggttgattttgc 353
>gb|AF378894.1|AF378894 Arabidopsis thaliana AT3g03890/F20H23_6 mRNA, complete cds Length = 1220 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 780 ggggttgcaacagctatccttggctctggagaatttag 817 ||||||||||| ||| | ||||| |||||||||||||| Sbjct: 670 ggggttgcaactgcttttcttggatctggagaatttag 707 Score = 42.1 bits (21), Expect = 5.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 467 gggttatccatctggttcaatggttgattttgc 499 ||||||||| || || ||||||||||||||||| Sbjct: 357 gggttatccttcagggtcaatggttgattttgc 389
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtcc 1165 |||||||||||||||||||||| Sbjct: 80614 ggcggtggcggtggcggcgtcc 80635
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1140 ggaaggcggtggcggtggcggc 1161 |||||||||||||||||||||| Sbjct: 90267 ggaaggcggtggcggtggcggc 90246
>dbj|AP004347.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0675B10 Length = 136229 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1141 gaaggcggtggcggtggcggcg 1162 |||||||||||||||||||||| Sbjct: 132416 gaaggcggtggcggtggcggcg 132437
>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0016H06 Length = 148158 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1141 gaaggcggtggcggtggcggcg 1162 |||||||||||||||||||||| Sbjct: 36073 gaaggcggtggcggtggcggcg 36094
>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07, from chromosome 3, complete sequence Length = 149539 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1143 aggcggtggcggtggcggcgtc 1164 |||||||||||||||||||||| Sbjct: 27133 aggcggtggcggtggcggcgtc 27112
>gb|AC169372.2| Sorghum bicolor clone SB_BBc0156J18, complete sequence Length = 108555 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 33261 ggcggtggcggtggcggcgtc 33241
>emb|CT829866.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN068E12, full insert sequence Length = 804 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 326 ggcggtggcggtggcggcgtc 346
>emb|CR855205.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0805A05, complete sequence Length = 113067 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1143 aggcggtggcggtggcggcgt 1163 ||||||||||||||||||||| Sbjct: 71091 aggcggtggcggtggcggcgt 71111
>ref|NM_001065159.1| Oryza sativa (japonica cultivar-group) Os06g0725700 (Os06g0725700) mRNA, complete cds Length = 867 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtccatg 1168 |||| |||||||||||||||||||| Sbjct: 612 ggcgctggcggtggcggcgtccatg 588
>ref|NM_001064870.1| Oryza sativa (japonica cultivar-group) Os06g0672400 (Os06g0672400) mRNA, complete cds Length = 1224 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 699 ggcggtggcggtggcggcgtc 679
>ref|NM_001053122.1| Oryza sativa (japonica cultivar-group) Os02g0289700 (Os02g0289700) mRNA, complete cds Length = 785 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 465 ggcggtggcggtggcggcgtc 445
>ref|NM_001052240.1| Oryza sativa (japonica cultivar-group) Os02g0120000 (Os02g0120000) mRNA, complete cds Length = 2352 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 53 ggcggtggcggtggcggcgtc 73
>ref|NM_001048312.1| Oryza sativa (japonica cultivar-group) Os01g0106600 (Os01g0106600) mRNA, complete cds Length = 1023 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1138 ctggaaggcggtggcggtggcggcg 1162 ||||| ||||||||||||||||||| Sbjct: 163 ctggagggcggtggcggtggcggcg 139
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1143 aggcggtggcggtggcggcgt 1163 ||||||||||||||||||||| Sbjct: 4029300 aggcggtggcggtggcggcgt 4029280
>ref|XM_963695.1| PREDICTED: Tribolium castaneum similar to CG8677-PA (LOC657224), mRNA Length = 6921 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1145 gcggtggcggtggcggcgtcc 1165 ||||||||||||||||||||| Sbjct: 6737 gcggtggcggtggcggcgtcc 6717
>dbj|AB254812.1| Cryptomeria japonica mRNA for putative ORFX, complete cds Length = 885 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 163 ggcggtggcggtggcggcgtc 143
>gb|AC110534.11| Mus musculus chromosome 17, clone RP23-174D11, complete sequence Length = 174600 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1299 caaacttaaagaaatgcaaag 1319 ||||||||||||||||||||| Sbjct: 123357 caaacttaaagaaatgcaaag 123377
>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence, complete sequence Length = 101410 Score = 42.1 bits (21), Expect = 5.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 467 gggttatccatctggttcaatggttgattttgc 499 ||||||||| || || ||||||||||||||||| Sbjct: 15951 gggttatccttcagggtcaatggttgattttgc 15983
>gb|AC016877.11| Homo sapiens chromosome 8, clone RP11-44N12, complete sequence Length = 188593 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 733 acttccgttttctgcacatca 753 ||||||||||||||||||||| Sbjct: 118227 acttccgttttctgcacatca 118207
>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence Length = 213888 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1142 aaggcggtggcggtggcggcg 1162 ||||||||||||||||||||| Sbjct: 184176 aaggcggtggcggtggcggcg 184156
>gb|AC142288.1| Pan troglodytes BAC clone RP43-178D12 from 7, complete sequence Length = 187294 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 733 acttccgttttctgcacatca 753 ||||||||||||||||||||| Sbjct: 64172 acttccgttttctgcacatca 64192
>gb|AC008620.12| Homo sapiens chromosome 5 clone CTB-14A14, complete sequence Length = 124713 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 cctcgcctcctcctcgccttctcag 305 |||| |||||||||||||||||||| Sbjct: 70907 cctcacctcctcctcgccttctcag 70931
>gb|AC104986.5| Homo sapiens chromosome 8, clone RP11-410L14, complete sequence Length = 153411 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 733 acttccgttttctgcacatca 753 ||||||||||||||||||||| Sbjct: 110985 acttccgttttctgcacatca 111005
>ref|NM_033041.2| Mus musculus hairy and enhancer of split 7 (Drosophila) (Hes7), mRNA dbj|AK050791.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030020D08 product:BHLH FACTOR HES7, full insert sequence Length = 965 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1137 tctggaaggcggtggcggtggcggc 1161 |||| |||||||||||||||||||| Sbjct: 637 tctgtaaggcggtggcggtggcggc 613
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 27521568 ggcggtggcggtggcggcgtc 27521588 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtccatg 1168 |||| |||||||||||||||||||| Sbjct: 30350723 ggcgctggcggtggcggcgtccatg 30350699
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 1050068 ggcggtggcggtggcggcgtc 1050048 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 10947389 ggcggtggcggtggcggcgtc 10947369 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 21770073 ggcggtggcggtggcggcgtc 21770053
>gb|AC155297.2| Mus musculus BAC clone RP24-238D1 from chromosome 13, complete sequence Length = 174487 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 606 gaggacagaacagatactgta 626 ||||||||||||||||||||| Sbjct: 128759 gaggacagaacagatactgta 128739
>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome Length = 1931047 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1142 aaggcggtggcggtggcggcg 1162 ||||||||||||||||||||| Sbjct: 387460 aaggcggtggcggtggcggcg 387440
>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the Vamp2 gene for vesicle-associated membrane 2, the Per1 gene for period homolog 1 (Drosophila), the Hes7 gene for hairy and enhancer of split 7 (Drosophila), the Aloxe3 gene for arachidonate lipoxygenase 3, the Alox12b gene for arachidonate 12-lipoxygenase 12R type, the Alox15b gene for arachidonate 15-lipoxygenase second type, the Gucy2e gene for guanylate cyclase 2e, a novel gene, the gene for LYST-interacting protein LIP8 (Lip8-pending), the gene for the likely ortholog of H. sapiens trafficking protein particle complex 1 (TRAPPC1)), the Kcnab3 gene for potassium voltage-gated channel shaker-related subfamily beta member 3, a novel gene, the 3' end of the Chd3 gene for chromodomain helicase DNA binding protein 3 and six CpG islands, complete sequence Length = 261224 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1137 tctggaaggcggtggcggtggcggc 1161 |||| |||||||||||||||||||| Sbjct: 39494 tctgtaaggcggtggcggtggcggc 39470
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1143 aggcggtggcggtggcggcgt 1163 ||||||||||||||||||||| Sbjct: 1003683 aggcggtggcggtggcggcgt 1003703
>emb|BX324004.6| Zebrafish DNA sequence from clone CH211-284O17 in linkage group 12, complete sequence Length = 136645 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1123 aatgacctctttgttctggaa 1143 ||||||||||||||||||||| Sbjct: 95466 aatgacctctttgttctggaa 95446
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 2592 ggcggtggcggtggcggcgtc 2572
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 38776 ggcggtggcggtggcggcgtc 38756
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtccatg 1168 |||| |||||||||||||||||||| Sbjct: 97318 ggcgctggcggtggcggcgtccatg 97294
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 91126 ggcggtggcggtggcggcgtc 91146
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 140637 ggcggtggcggtggcggcgtc 140657
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1138 ctggaaggcggtggcggtggcggcg 1162 ||||| ||||||||||||||||||| Sbjct: 84365 ctggagggcggtggcggtggcggcg 84389
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 153588 ggcggtggcggtggcggcgtc 153568
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 151470 ggcggtggcggtggcggcgtc 151450
>dbj|AP005835.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008E01 Length = 156856 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 62472 ggcggtggcggtggcggcgtc 62452
>ref|XM_953705.1| Neurospora crassa OR74A hypothetical protein (NCU05990.1) partial mRNA Length = 2112 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 685 ggcggtggcggtggcggcgtc 705
>dbj|AK101590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051C08, full insert sequence Length = 1654 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 36 ggcggtggcggtggcggcgtc 56
>dbj|AK068794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162N11, full insert sequence Length = 1225 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 700 ggcggtggcggtggcggcgtc 680
>dbj|AK067383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100B15, full insert sequence Length = 2353 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 54 ggcggtggcggtggcggcgtc 74
>dbj|AK063231.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-F05, full insert sequence Length = 786 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 321 ggcggtggcggtggcggcgtc 341
>dbj|AK061314.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C12, full insert sequence Length = 1022 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1138 ctggaaggcggtggcggtggcggcg 1162 ||||| ||||||||||||||||||| Sbjct: 163 ctggagggcggtggcggtggcggcg 139
>ref|XM_560671.1| Anopheles gambiae str. PEST ENSANGP00000027627 (ENSANGG00000023126), partial mRNA Length = 2037 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1142 aaggcggtggcggtggcggcg 1162 ||||||||||||||||||||| Sbjct: 1612 aaggcggtggcggtggcggcg 1592
>emb|AL954339.10| Zebrafish DNA sequence from clone CH211-221J21 in linkage group 12, complete sequence Length = 203958 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1123 aatgacctctttgttctggaa 1143 ||||||||||||||||||||| Sbjct: 109805 aatgacctctttgttctggaa 109825
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1142 aaggcggtggcggtggcggcg 1162 ||||||||||||||||||||| Sbjct: 242457 aaggcggtggcggtggcggcg 242477
>gb|AF119821.1|AF119821 Mus musculus attractin (Mgca) mRNA, complete cds Length = 4313 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1144 ggcggtggcggtggcggcgtc 1164 ||||||||||||||||||||| Sbjct: 32 ggcggtggcggtggcggcgtc 52
>dbj|AB050104.1| Mus musculus gene for bHLH factor Hes7, complete cds Length = 3591 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1137 tctggaaggcggtggcggtggcggc 1161 |||| |||||||||||||||||||| Sbjct: 3090 tctgtaaggcggtggcggtggcggc 3066
>dbj|AB049065.1| Mus musculus mRNA for bHLH factor Hes7, complete cds Length = 678 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1137 tctggaaggcggtggcggtggcggc 1161 |||| |||||||||||||||||||| Sbjct: 615 tctgtaaggcggtggcggtggcggc 591
>dbj|AP003691.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1594B3, complete sequence Length = 157952 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 733 acttccgttttctgcacatca 753 ||||||||||||||||||||| Sbjct: 120060 acttccgttttctgcacatca 120040 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 235,713,455 Number of extensions: 12458872 Number of successful extensions: 253730 Number of sequences better than 10.0: 87 Number of HSP's gapped: 253720 Number of HSP's successfully gapped: 147 Length of query: 1444 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1421 Effective length of database: 18,503,978,556 Effective search space: 26294153528076 Effective search space used: 26294153528076 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
