>Q9JJP9:UBQL1_RAT Ubiquilin-1 - Rattus norvegicus (Rat)|
          Length = 582
 Score = 32.3 bits (72), Expect = 5.1
 Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
 Frame = -2

Query: 978 TRNSDLRCSMSFDHLSKTGH--LDTAMRTSASDHLNVFFNCSTLAAMSSSLRNETACSAC 805
           ++N DL   M  ++    G+  L   MR      L    N  TL+AMS    N  A  A 
Sbjct: 402 SQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMS----NPRAMQAL 457

Query: 804 LNIPEPRGTPILSAHATIPRTRSGLAAMILGSLAISQAPS 685
           L I +   T    A   IP    GLAA   G  A + APS
Sbjct: 458 LQIQQGLQTLATEAPGLIPGFTPGLAAGNSGGPAGTTAPS 497

>Q8TEU7:RPGF6_HUMAN Rap guanine nucleotide exchange factor 6 - Homo sapiens (Human)|
          Length = 1601

 Score = 32.3 bits (72), Expect = 5.1
 Identities = 21/67 (31%), Positives = 36/67 (53%)
 Frame = -2

Query: 954  SMSFDHLSKTGHLDTAMRTSASDHLNVFFNCSTLAAMSSSLRNETACSACLNIPEPRGTP 775
            S   D+LS + H + + R+S      +  NCS + +MS++L++E   S  L +PE  G  
Sbjct: 1255 SAKSDNLSDSSHSEISSRSS------IVSNCS-VDSMSAALQDERCSSQALAVPESTGAL 1307

Query: 774  ILSAHAT 754
              + HA+
Sbjct: 1308 EKTEHAS 1314

>Q7N8N4:LPXB_PHOLL Lipid-A-disaccharide synthase - Photorhabdus luminescens subsp.|
            laumondii
          Length = 389

 Score = 32.3 bits (72), Expect = 5.1
 Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 17/160 (10%)
 Frame = +2

Query: 746  LGMVACAESIGVPRGSGMFRHALHAVSFLNEEDIAAKVEQLKKTLRWSDAE------VRI 907
            +G++A  E+ G   G+G+ R     V       +A  + Q +    W + E      +  
Sbjct: 15   IGLIA-GETSGDILGAGLIRALKAKVPNARFVGVAGPLMQAEGCEAWYEMEELAVMGIVE 73

Query: 908  AVSRWPVLLRWSKDMLQRKSEFLVSKVGLEP-AYIARRPVMIGLSLEGRLKPR-----YY 1069
             + R P LL+  KD+  R +E       L+P  ++        ++LEGRLK R     +Y
Sbjct: 74   VLGRLPRLLKIRKDLTTRFTE-------LKPDVFVGIDAPDFNITLEGRLKQRGIRTIHY 126

Query: 1070 VMRFL-----KENALLNHDTNYYTMFLISEKAFVEKFICP 1174
            V   +     K    +   T+    FL  EKAF +KF  P
Sbjct: 127  VSPSVWAWRQKRVFKIGKATDMVLAFLPFEKAFYDKFNVP 166

>P43597:YFI6_YEAST Uncharacterized protein YFR016C - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 1233

 Score = 32.0 bits (71), Expect = 6.6
 Identities = 19/79 (24%), Positives = 34/79 (43%)
 Frame = -2

Query: 624 KPELCLSCRNRSSMEPKSGR*YSSLGTRDMLRK*AGVRETRRAISEGDRPRRVSPTRTVD 445
           KPE+  +  N    +PKS R   S    +  +K  G   +  +  E ++P+R   T+  D
Sbjct: 710 KPEIATTIENSEEEDPKSQRVQISTEQAETTQKDMGDVGSTTSFKEEEKPKRFEITQEGD 769

Query: 444 RVLSTPAQRKCGSLTTRAA 388
           ++       + G  T  A+
Sbjct: 770 KITGKDTNHEHGEATEAAS 788

>Q8R317:UBQL1_MOUSE Ubiquilin-1 - Mus musculus (Mouse)|
          Length = 582

 Score = 32.0 bits (71), Expect = 6.6
 Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
 Frame = -2

Query: 978 TRNSDLRCSMSFDHLSKTGH--LDTAMRTSASDHLNVFFNCSTLAAMSSSLRNETACSAC 805
           ++N DL   M  ++    G+  L   MR      L    N  TL+AMS    N  A  A 
Sbjct: 402 SQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMS----NPRAMQAL 457

Query: 804 LNIPEPRGTPILSAHATIPRTRSGLAAMILGSLAISQAPS 685
           L I +   T    A   IP    GLAA   G  + + APS
Sbjct: 458 LQIQQGLQTLATEAPGLIPGFTPGLAAGNSGGSSGTNAPS 497

>O14490:DLGP1_HUMAN Disks large-associated protein 1 - Homo sapiens (Human)|
          Length = 977

 Score = 32.0 bits (71), Expect = 6.6
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
 Frame = -2

Query: 903 RTSASDHLNVFFNCSTLAAMSSSLRNETACSACLNIPEPRGTPIL-----SAHATIPRTR 739
           R+++   L  +   S  A  +S   N+  CS C N+P    TP+L     S+  T+ R R
Sbjct: 230 RSASQYFLEAYNTISEQAVKASRSNNDVKCSTCANLPVSLDTPLLKKSAWSSTLTVSRAR 289


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 225,879,456
Number of extensions: 4755359
Number of successful extensions: 12326
Number of sequences better than 10.0: 6
Number of HSP's gapped: 12323
Number of HSP's successfully gapped: 6
Length of query: 480
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 363
Effective length of database: 68,593,924
Effective search space: 24899594412
Effective search space used: 24899594412
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)