>Q7XRU4:MUB4_ORYSJ Membrane-anchored ubiquitin-fold protein 4 precursor - Oryza sativa|
           subsp. japonica (Rice)
          Length = 135
 Score =  218 bits (554), Expect = 4e-56
 Identities = 105/110 (95%), Positives = 108/110 (98%)
 Frame = +3

Query: 324 KFRLFDGSDIGPVRCNAAATTVAALKDRVVADWPKDKTIVPKSANDVKLISGGKILENDK 503
           KFRLFDGSDIGP+RCNA ATTVAALKDRVVADWPKDKTIVPK+ANDVKLISGGKILENDK
Sbjct: 26  KFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKTANDVKLISGGKILENDK 85

Query: 504 NIAQCKAPFGDLPSTVITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 653
           NIAQC+APFGDLPST ITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL
Sbjct: 86  NIAQCRAPFGDLPSTAITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 135

>Q9SW27:MUB3_ARATH Membrane-anchored ubiquitin-fold protein 3 precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 118

 Score =  150 bits (379), Expect = 8e-36
 Identities = 74/110 (67%), Positives = 86/110 (78%)
 Frame = +3

Query: 324 KFRLFDGSDIGPVRCNAAATTVAALKDRVVADWPKDKTIVPKSANDVKLISGGKILENDK 503
           KFRL+DGSDIGP R +AA+T V  LK RVV+DWPK KT+VPK  N+VKLIS GKILEN+K
Sbjct: 10  KFRLYDGSDIGPFRYSAAST-VDFLKQRVVSDWPKGKTVVPKGINEVKLISSGKILENNK 68

Query: 504 NIAQCKAPFGDLPSTVITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 653
            + QCK PFGD+   VI MHVVVQPS AKSK +KK +K PK   C+CTIL
Sbjct: 69  TVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPKAVICTCTIL 118

>Q9LSD8:MUB4_ARATH Membrane-anchored ubiquitin-fold protein 4 precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 120

 Score =  144 bits (363), Expect = 6e-34
 Identities = 70/112 (62%), Positives = 90/112 (80%), Gaps = 2/112 (1%)
 Frame = +3

Query: 324 KFRLFDGSDIGPVRCNAAATTVAALKDRVVADWPKDKTIVPKSANDVKLISGGKILENDK 503
           KFRL+DGSD+GP + +  AT V+ LK+R+V++WPKDK IVPKSA+D+KLI+ GKILEN K
Sbjct: 10  KFRLYDGSDVGPFQYSPTAT-VSMLKERIVSEWPKDKKIVPKSASDIKLINAGKILENGK 68

Query: 504 NIAQCKAPFGDLPSTVITMHVVVQPSSAKSKPDKKTNK--LPKTTRCSCTIL 653
            +AQCKAPF DLP +VITMHVVVQ S  K++P+KK  K   P+ + CSCTI+
Sbjct: 69  TVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIEKEEAPQRSFCSCTIM 120

>Q6Z8K4:MUB3_ORYSJ Membrane-anchored ubiquitin-fold protein 3 precursor - Oryza sativa|
           subsp. japonica (Rice)
          Length = 119

 Score =  122 bits (306), Expect = 2e-27
 Identities = 57/110 (51%), Positives = 80/110 (72%)
 Frame = +3

Query: 324 KFRLFDGSDIGPVRCNAAATTVAALKDRVVADWPKDKTIVPKSANDVKLISGGKILENDK 503
           KFRLFDG+DIGP + + + TTV+ALK+ ++A WP+DK I PK+ ND+KLI+ G+ILEN++
Sbjct: 11  KFRLFDGTDIGPSKYDPS-TTVSALKEFILARWPQDKEITPKTVNDLKLINAGRILENNR 69

Query: 504 NIAQCKAPFGDLPSTVITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 653
            +A+ + P G++P  VITMHVVV+P       +K+    PK  RC CTIL
Sbjct: 70  TLAESRVPVGEVPGGVITMHVVVRPPQPDKNSEKQLANSPKQNRCGCTIL 119

>Q8GWJ6:MUB6_ARATH Membrane-anchored ubiquitin-fold protein 6 precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 119

 Score =  111 bits (278), Expect = 4e-24
 Identities = 52/110 (47%), Positives = 77/110 (70%)
 Frame = +3

Query: 324 KFRLFDGSDIGPVRCNAAATTVAALKDRVVADWPKDKTIVPKSANDVKLISGGKILENDK 503
           KFRL DG+DIGP + N + T V++LK+++++ WPKDK   PK+ ND+KLI+ GKILEN++
Sbjct: 11  KFRLADGTDIGPSKYNQSMT-VSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNR 69

Query: 504 NIAQCKAPFGDLPSTVITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 653
            +A+ + P  +LP  +ITMH+V++  +   K +K  N  P   RC CTIL
Sbjct: 70  TLAESRLPVCELPGMIITMHIVLRLPTLDKKSEKLQNDPPMKNRCVCTIL 119

>Q75GT2:MUB1_ORYSJ Membrane-anchored ubiquitin-fold protein 1 precursor - Oryza sativa|
           subsp. japonica (Rice)
          Length = 119

 Score =  110 bits (276), Expect = 7e-24
 Identities = 57/110 (51%), Positives = 78/110 (70%)
 Frame = +3

Query: 324 KFRLFDGSDIGPVRCNAAATTVAALKDRVVADWPKDKTIVPKSANDVKLISGGKILENDK 503
           KFRL DG+DIGP R   AA+TVA LK+ +VA WPKDK   P++ ND+KLI+ GKILEN+K
Sbjct: 12  KFRLPDGTDIGPKRY-PAASTVATLKESIVAQWPKDKEKGPRTVNDLKLINAGKILENNK 70

Query: 504 NIAQCKAPFGDLPSTVITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 653
            +++CK+P  D  S + TMHVVV+  ++  + +K   K PK  RC C+I+
Sbjct: 71  TLSECKSPICDF-SGLTTMHVVVRAPTSDKQSNKIVAKKPKDFRCGCSIM 119

>Q9SH14:MUB5_ARATH Membrane-anchored ubiquitin-fold protein 5 precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 120

 Score =  108 bits (270), Expect = 4e-23
 Identities = 54/112 (48%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
 Frame = +3

Query: 324 KFRLFDGSDIGPVRCNAAATTVAALKDRVVADWPKDKTIVPKSANDVKLISGGKILENDK 503
           KFRL DG+DIGP + +   T VA+LK++++A WPKDK   PK  N+VKLI+GGKILEN+K
Sbjct: 10  KFRLADGTDIGPSKYSQFMT-VASLKEKIIAQWPKDKENAPKMINEVKLINGGKILENNK 68

Query: 504 NIAQCKA--PFGDLPSTVITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 653
            +++ ++    G+LP  V TMHVV++P   + K +K  N  P+ + C C IL
Sbjct: 69  TLSEARSLITIGELPGIVTTMHVVLRPPLFEKKKEKLQNDPPRKSHCVCCIL 120

>Q8LCS8:MUB2_ARATH Membrane-anchored ubiquitin-fold protein 2 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 124

 Score =  104 bits (259), Expect = 7e-22
 Identities = 55/108 (50%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
 Frame = +3

Query: 324 KFRLFDGSDIGPVRCNAAATTVAALKDRVVADWPKDKTIVPKSANDVKLISGGKILENDK 503
           KFRL DGSDIGP +    ATTVA LK+ VVA WP+DK   PK+  DVKLIS G+ILEN+K
Sbjct: 11  KFRLNDGSDIGP-KLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRILENNK 69

Query: 504 NIAQCKAPFGDLPSTVITMHVVVQPS-SAKSKPDKKTNKLPKTTRCSC 644
            +  C++P G+    V TMHV++Q   + K K  KK     K  +C C
Sbjct: 70  TVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVC 117

>Q9MAB9:MUB1_ARATH Membrane-anchored ubiquitin-fold protein 1 precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 117

 Score =  100 bits (249), Expect = 1e-20
 Identities = 49/110 (44%), Positives = 74/110 (67%)
 Frame = +3

Query: 324 KFRLFDGSDIGPVRCNAAATTVAALKDRVVADWPKDKTIVPKSANDVKLISGGKILENDK 503
           KFRL DGSDIGP +    ATTV+ALK+ V+++WP++K   PK+  +VKLIS GK+LEN K
Sbjct: 11  KFRLTDGSDIGP-KAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLENSK 69

Query: 504 NIAQCKAPFGDLPSTVITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 653
            +   ++P  +L   V TMHV++Q  +  ++ +KK    PK  +C C+++
Sbjct: 70  TVKDYRSPVSNLAGAVTTMHVIIQ--APVTEKEKKPKGDPKMNKCVCSVM 117

>Q67UI2:MUB2_ORYSJ Membrane-anchored ubiquitin-fold protein 2 precursor - Oryza sativa|
           subsp. japonica (Rice)
          Length = 126

 Score = 92.4 bits (228), Expect = 3e-18
 Identities = 50/115 (43%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
 Frame = +3

Query: 324 KFRLFDGSDIGPVRCNAAATTVAALKDRVVADWPKDKTIVPKSANDVKLISGGKILENDK 503
           +FRL DGSDIGP   +  ATTV ALK+ V+A WP+ K I P++ NDV +I+ G++LEN++
Sbjct: 17  RFRLDDGSDIGP-SMHDQATTVTALKEFVLARWPQGKEIAPRTVNDVTIINAGQVLENNR 75

Query: 504 NIAQCKAPFGDLPSTVITMHVVVQPSSAKSKPDKKTNKLPKT-----TRCSCTIL 653
            +A+ +    + P   ITMHVVV+    +S+P+++  + PK        C CTIL
Sbjct: 76  TLAESRNLAAESPEGPITMHVVVR----RSRPERRVKQPPKARPPERIGCGCTIL 126

>Q2PC93:SSPO_CHICK SCO-spondin precursor - Gallus gallus (Chicken)|
          Length = 5255

 Score = 33.9 bits (76), Expect = 1.2
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = -2

Query: 945 HGNEQQVLPSTTAAAPAMCLYLVHHIETSFVG*NKTKRCHCPGDRGPY 802
           +G E+ V P++T    AMC Y+    ET  V  N+T R  C G  GP+
Sbjct: 65  YGGERGVPPTSTHPGAAMC-YIYRPPETQLVVRNRTVRACCAGWSGPH 111

>Q40153:LE14B_LITER LEC14B protein - Lithospermum erythrorhizon|
          Length = 473

 Score = 31.2 bits (69), Expect = 7.5
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 821 LATGDRTDSCVVSSLQLQYHLTTIHDTSWALDFPLLSS 708
           L TGD+  +       LQYH  T+ D SW  ++P+L S
Sbjct: 414 LVTGDQVST-------LQYHKATVRDCSWHPNYPMLVS 444

>Q8TD26:CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 - Homo sapiens (Human)|
          Length = 2715

 Score = 31.2 bits (69), Expect = 7.5
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = +3

Query: 348  DIGPVRCNAAATTVAALKDRVV----ADWPKDKTIVPKSANDVKLISGGKILENDKNIAQ 515
            DIG     A A T+A L         ++WPKD+ I+ +  N   ++  GK        +Q
Sbjct: 2063 DIGDELQEARAPTIAQLLQEKTLYSFSEWPKDRVIINRLDNICHVVLKGKWPS-----SQ 2117

Query: 516  CKAPFGDLPSTVIT 557
               P G LP+ V+T
Sbjct: 2118 QYEPSGTLPTPVLT 2131

>A0B9M2:UPPP_METTP Undecaprenyl-diphosphatase - Methanosaeta thermophila (strain DSM|
           6194 / PT) (Methanothrix thermophila (strain DSM 6194 /
           PT))
          Length = 256

 Score = 31.2 bits (69), Expect = 7.5
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = -1

Query: 637 QRVVLGNLFVFLSGFDFADDGWTTTCIVITVLGRSPKGALHCAIFLSFSRILPPLISFTS 458
           Q +VLG L         + +G T   + I+ LG  P  AL C+IFL    +L  L+ F S
Sbjct: 5   QALVLGALQGITEWLPVSSEGQTMLAM-ISWLGMRPTDALSCSIFLHTGTMLAVLVRFRS 63

Query: 457 LAL 449
             L
Sbjct: 64  RLL 66


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 163,120,229
Number of extensions: 3414280
Number of successful extensions: 9148
Number of sequences better than 10.0: 14
Number of HSP's gapped: 9128
Number of HSP's successfully gapped: 14
Length of query: 352
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 238
Effective length of database: 69,416,809
Effective search space: 16521200542
Effective search space used: 16521200542
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)