ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf108k24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK062518:Os01g0264500 | 206 | 2e-53 | 2 | AK072718:Os06g0206200 | 72 | 6e-13 | 3 | AK103576:Os07g0479100 | 31 | 1.1 | 4 | AK068617:Os07g0471000 | 30 | 2.0 | 5 | AB031396:Os07g0471000 | 30 | 2.0 | 6 | AK110278: | 30 | 2.6 | 7 | AK100129:Os09g0372900 | 30 | 2.6 | 8 | AK067586:Os09g0372900 | 30 | 2.6 | 9 | AK059785:Os09g0372900 | 30 | 2.6 | 10 | AK062341:Os01g0311300 | 29 | 4.4 | 11 | Os06g0643700:Os06g0643700 | 28 | 5.7 | 12 | AK111366:Os08g0544700 | 28 | 5.7 | 13 | AK106687:Os06g0713300 | 28 | 5.7 | 14 | AK062983:Os04g0258900 | 28 | 5.7 | 15 | AK060630:Os08g0161500 | 28 | 5.7 | 16 | AK071065:Os04g0469500 | 28 | 7.5 | 17 | AK060708:Os09g0463700 | 28 | 7.5 | 18 | Os12g0291000:Os12g0291000 | 28 | 9.7 | 19 | AK108664:Os12g0605300 | 28 | 9.7 | 20 | AK102196:Os10g0529400 | 28 | 9.7 | 21 | AK101341:Os02g0152500 | 28 | 9.7 | 22 | AK107479: | 28 | 9.8 |
|---|
>AK062518:Os01g0264500 | Length = 138 Score = 206 bits (523), Expect = 2e-53 Identities = 100/139 (71%), Positives = 109/139 (78%) Frame = +3 Query: 102 LAGAMAEHAAPELPKRCHHCAGPLSKDMETSSWTVTPLVRDSFSMIGSAVGGTAGAFYAF 281 +AG + A PE+P RCHHCAGPLSKDMETSSWTV PLVRDSFSMIGSA+GGTAGAFY F Sbjct: 1 MAGEASPPAPPEIPTRCHHCAGPLSKDMETSSWTVPPLVRDSFSMIGSAIGGTAGAFYGF 60 Query: 282 NHAMPVVRRYIKGPMWIHFLVGAPPVVVFSSACAGLAAGTIPAVAQLVXXXXXXXXXXXX 461 NH MP VRRYIKGPMW+HFLVGAPPV+VFSSACAGLA GTIPA+AQLV Sbjct: 61 NHTMPFVRRYIKGPMWMHFLVGAPPVIVFSSACAGLAGGTIPALAQLV-SSSYHSATASS 119 Query: 462 FARPASHDDMHKSRGSPPL 518 FA S D+MHK+R S L Sbjct: 120 FAHTTSRDEMHKARSSSTL 138
>AK072718:Os06g0206200 | Length = 159 Score = 71.6 bits (174), Expect = 6e-13 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = +3 Query: 147 RCHHCAGPLSKDME-TSSWTVTPLVRDSFSMIGSAVGGTAGAFYAFNHAMPVVRRYIKGP 323 RC C L+ + W +T ++ D+ ++ GS G A + FN +P V++++KGP Sbjct: 31 RCPRCLSLLTPNSSGEGDWAITSVLHDATAVAGSGAGAMLSAVHGFNTGIPFVQKHVKGP 90 Query: 324 MWIHFLVGAPPVVVFSSACAGLAAGTIPAVAQL 422 W+ LVG PP+++FS A A +P AQL Sbjct: 91 KWLQLLVGVPPLLLFSGTSALFGAYALPTFAQL 123
>AK103576:Os07g0479100 | Length = 249 Score = 30.8 bits (68), Expect = 1.1 Identities = 20/69 (28%), Positives = 31/69 (44%) Frame = +3 Query: 99 SLAGAMAEHAAPELPKRCHHCAGPLSKDMETSSWTVTPLVRDSFSMIGSAVGGTAGAFYA 278 S A A A + L + C G + + WTV L+ F+++GS VG GAF Sbjct: 14 SAAAAAAAASGCCLDRLWRACGGCGAAAASAAGWTVCALLTCVFAVVGSLVGVFIGAFMG 73 Query: 279 FNHAMPVVR 305 + ++R Sbjct: 74 MSTESGMLR 82
>AK068617:Os07g0471000 | Length = 893 Score = 30.0 bits (66), Expect = 2.0 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Frame = +3 Query: 207 TPLVRDSFSMIGSAVGGT-----AGAFYAFNHAMPVVRRYIKGPM 326 TP +RDSF IGS V T + H++PV + GP+ Sbjct: 175 TPYIRDSFVTIGSKVSTTFVVNADSGEIIYKHSLPVALNEVGGPL 219
>AB031396:Os07g0471000 | Length = 893 Score = 30.0 bits (66), Expect = 2.0 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Frame = +3 Query: 207 TPLVRDSFSMIGSAVGGT-----AGAFYAFNHAMPVVRRYIKGPM 326 TP +RDSF IGS V T + H++PV + GP+ Sbjct: 175 TPYIRDSFVTIGSKVSTTFVVNADSGEIIYKHSLPVALNEVGGPL 219
>AK110278: | Length = 661 Score = 29.6 bits (65), Expect = 2.6 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = -3 Query: 145 LGSSGAACSAMAPARDQRWSARWMDPPRSRASGKKGS 35 +G S ++ +A APA R S R RSR+ G++GS Sbjct: 328 VGGSSSSSAAPAPAASHRSSRRSGSRSRSRSGGRRGS 364
>AK100129:Os09g0372900 | Length = 375 Score = 29.6 bits (65), Expect = 2.6 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = -3 Query: 781 VTEPQASLSCFTTPQYLF*YKKKI-TQDRGHDLYIEIHTKKNRSERSACQSSSFCMNILT 605 ++ P SC+ TP++ ++ KI Q +LY + + + AC S F + T Sbjct: 298 ISLPWLMPSCYFTPKHTLFHEGKIWVQLLARNLYCYDPSSSSTELKMACPESEFPFSTHT 357 Query: 604 FTKASPVIRWHRFLRSLQ 551 F ++ +R F++ +Q Sbjct: 358 FIESIVPLRKDYFIKQIQ 375
>AK067586:Os09g0372900 | Length = 375 Score = 29.6 bits (65), Expect = 2.6 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = -3 Query: 781 VTEPQASLSCFTTPQYLF*YKKKI-TQDRGHDLYIEIHTKKNRSERSACQSSSFCMNILT 605 ++ P SC+ TP++ ++ KI Q +LY + + + AC S F + T Sbjct: 298 ISLPWLMPSCYFTPKHTLFHEGKIWVQLLARNLYCYDPSSSSTELKMACPESEFPFSTHT 357 Query: 604 FTKASPVIRWHRFLRSLQ 551 F ++ +R F++ +Q Sbjct: 358 FIESIVPLRKDYFIKQIQ 375
>AK059785:Os09g0372900 | Length = 379 Score = 29.6 bits (65), Expect = 2.6 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = -3 Query: 781 VTEPQASLSCFTTPQYLF*YKKKI-TQDRGHDLYIEIHTKKNRSERSACQSSSFCMNILT 605 ++ P SC+ TP++ ++ KI Q +LY + + + AC S F + T Sbjct: 302 ISLPWLMPSCYFTPKHTLFHEGKIWVQLLARNLYCYDPSSSSTELKMACPESEFPFSTHT 361 Query: 604 FTKASPVIRWHRFLRSLQ 551 F ++ +R F++ +Q Sbjct: 362 FIESIVPLRKDYFIKQIQ 379
>AK062341:Os01g0311300 | Length = 127 Score = 28.9 bits (63), Expect = 4.4 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%) Frame = +3 Query: 168 PLSKDMETSSWTVTPLVRDSFSMIGSAVGGTAGAFYAFNHAMPVVRRYIKGPMWIHF--- 338 P S SSW P S A +A A AF H P VRR + + I+F Sbjct: 4 PASSSRAPSSWASPPTSPHS----SPAAVASASAPLAFLHPTPPVRRIVIAALGIYFFQH 59 Query: 339 LVGAPPVVVF 368 L G VV++ Sbjct: 60 LTGIEVVVLY 69
>Os06g0643700:Os06g0643700 | Length = 370 Score = 28.5 bits (62), Expect = 5.7 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 2/85 (2%) Frame = +3 Query: 132 PELPKRCHHCAGPLSKDMETSSWTVTPLVRDSFSMIGSAVGGTAGAFYAFNHAMPVVRRY 311 P++ H + P+SK E S + ++ + S + ++ +AGA A A PV Sbjct: 110 PQVADLIGHLSWPISKVAENVSSNIGDVLSGAASFMQASPASSAGAMAA---AWPVTAAA 166 Query: 312 IKGPMW--IHFLVGAPPVVVFSSAC 380 W FL GA ++ S+AC Sbjct: 167 AATTRWPFFVFLAGAMFCLLSSAAC 191
>AK111366:Os08g0544700 | Length = 164 Score = 28.5 bits (62), Expect = 5.7 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%) Frame = -3 Query: 169 GPAQWWHLLG-SSGAACSAMAPARDQRW 89 GP++WW G S G AP+R RW Sbjct: 26 GPSRWWFGCGQSGGGVVGQRAPSRTVRW 53
>AK106687:Os06g0713300 | Length = 64 Score = 28.5 bits (62), Expect = 5.7 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = +2 Query: 260 CRRVLCI*SCYACCSALHKRANVDTFSCW-CPSSCCILFCVCWISSWYNTSRCATGFVVL 436 CR + C C +CC N + C C SSCC L+C C Y S C L Sbjct: 13 CRPMYCPTCCSSCC------LNCCSSCCLNCCSSCC-LYC-CSSCCLYCCSSCC-----L 59 Query: 437 SCC 445 +CC Sbjct: 60 NCC 62
>AK062983:Os04g0258900 | Length = 408 Score = 28.5 bits (62), Expect = 5.7 Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 10/60 (16%) Frame = -2 Query: 551 ILWLVCCTSKL----------QWRGASALVHIVVRSRAGKGGR*HGSMTGRRNQLRNGWY 402 ++W+ CC KL QWR S H + +R G R G+RN +Y Sbjct: 190 VIWMACCRGKLVAFFFSSESQQWRALSPPEHYALSTRRVMGVR-----LGQRNHAHGCFY 244
>AK060630:Os08g0161500 | Length = 389 Score = 28.5 bits (62), Expect = 5.7 Identities = 20/67 (29%), Positives = 23/67 (34%), Gaps = 5/67 (7%) Frame = +2 Query: 296 CCSALHKRANVDTFSCWCPS-----SCCILFCVCWISSWYNTSRCATGFVVLSCCHVIAL 460 CC R V SC CP CC C+ S + S C + C Sbjct: 306 CC-----RIRVRKPSCRCPGCNLSCGCCSGLMSCFSSRLFKCSTCFSSCSCRGC-----F 355 Query: 461 LCPPCFS 481 CP CFS Sbjct: 356 KCPTCFS 362
>AK071065:Os04g0469500 | Length = 487 Score = 28.1 bits (61), Expect = 7.5 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +1 Query: 61 TGADPSTGRTISDLSRAPWRSTPPRSYPRGATTAQ 165 T PST ++ S P ++PPR PR + TA+ Sbjct: 71 TRRPPSTSPRVTSPSATPSSTSPPRRRPRSSPTAR 105
>AK060708:Os09g0463700 | Length = 372 Score = 28.1 bits (61), Expect = 7.5 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = +1 Query: 106 RAPWRSTPPRSYPRGATTAQGLSPRTWKLAAGP 204 RAP +STPPR+ P+ +T Q ++P+ AA P Sbjct: 187 RAPPQSTPPRAAPQ-STPPQRVAPQPPATAAAP 218
>Os12g0291000:Os12g0291000 | Length = 2065 Score = 27.7 bits (60), Expect = 9.7 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -3 Query: 142 GSSGAACSAMAPARDQRWSARWMDPPRSRASGKKGS 35 GSS A PA+ +R S+R +PP G KGS Sbjct: 4 GSSRANIDQFFPAKKRRPSSRKDEPPSGSPRGAKGS 39
>AK108664:Os12g0605300 | Length = 407 Score = 27.7 bits (60), Expect = 9.7 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +2 Query: 338 SCWCPSSCCI-LFCVCWISSWYNTSRCATGFVVLSCCHVIALLCPPCFSR 484 SC C S C+ L+CVC+ S + + C C PC+++ Sbjct: 102 SCSCKKSKCLKLYCVCFASGSHCSESCG---------------CDPCYNK 136
>AK102196:Os10g0529400 | Length = 93 Score = 27.7 bits (60), Expect = 9.7 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = -3 Query: 133 GAACSAMAPARDQRWSARWMDPPRSRASG 47 GA+ S M P R S RW PRS + G Sbjct: 55 GASASWMPPRPSCRTSTRWSSTPRSSSQG 83
>AK101341:Os02g0152500 | Length = 749 Score = 27.7 bits (60), Expect = 9.7 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = -2 Query: 548 LWLVCCTSK-LQWRGASALVHIVVRSRAGKGGR*HGSMTGRRNQLRNGWYCTSC*SSTRR 372 LWL C + + LQ H+ + G+ G +G+ +L G+YCT C Sbjct: 178 LWLFCSSDQPLQKDSCVFSCHLECALKDGRTGI---MQSGQCKKLDGGYYCTRC------ 228 Query: 371 REYNNWRGTNKK 336 R+ N+ G+ KK Sbjct: 229 RKQNDLLGSWKK 240
>AK107479: | Length = 283 Score = 27.7 bits (60), Expect = 9.8 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +1 Query: 40 PSSR*LGTGADPSTGRTISDLSRAPWRSTPPRSYPRGATTAQGLS 174 P+ R G + + S +P R TP R P GAT A G+S Sbjct: 176 PAMRYADEGGEEGSSPAESPWRPSPMRKTPCRRRPGGATGAGGVS 220 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,318,425 Number of extensions: 653335 Number of successful extensions: 2086 Number of sequences better than 10.0: 22 Number of HSP's gapped: 2079 Number of HSP's successfully gapped: 22 Length of query: 269 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 170 Effective length of database: 11,435,796 Effective search space: 1944085320 Effective search space used: 1944085320 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
