ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf114e18 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ867393.1| Triticum aestivum mRNA for glycosyltransferase (a2a gene) Length = 2129 Score = 916 bits (462), Expect = 0.0 Identities = 585/626 (93%) Strand = Plus / Plus Query: 1198 tcggtgttgttcatggagcccgagggttcgcagagggacgaggtgtggaagatcaagcct 1257 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 848 tcggtgctgttcatggagcccgaggggtcgcagagggacgaggtgtggaagatcaagccc 907 Query: 1258 tacctgcggaaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcg 1317 |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 908 tacccgcggaagggcgacgagttctgcctcagccacatcacggagctgacggtcaagtcc 967 Query: 1318 agcaaggtggccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctc 1377 |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 968 agcaaggtggccgccgagtgcacccggtaccacgacgtgcccgtggtcatcttctcgctc 1027 Query: 1378 accggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcacc 1437 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 accggctacacgggcaacctcttccacgacttcaccgacgtgatcgtgccgctcttcacc 1087 Query: 1438 acggccagccagttcaacggcgaggtccagttcctcatcacggacatggcgctctggtgg 1497 |||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1088 acggccgcccagttcgacggcgaggtgcagttcctcatcacggacatggcgctctggtgg 1147 Query: 1498 accatcaagtaccacaccctgctccagaagttgttcaagtaccccttgatcgacttcagc 1557 ||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 1148 accgttaagtaccacaccctgctccagaagctgtccaagtaccccttgatcgacttcagc 1207 Query: 1558 aaggacgatcaggtgcactgcttcaagcacgccatcatcggcacgcacgcctacatggag 1617 |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1208 aaggacgaccaggtgcgctgcttcaagcacgccatcgtcggcacgcacgcctacatggag 1267 Query: 1618 ttcaccatcgatgcctccaagtcgccgcacggcgtcaccatggtcgatttcaaccggttc 1677 ||||||||||| ||| ||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1268 ttcaccatcgacgccgccaagtcgccgaacggggtcaccatggtcgacttcaaccggttc 1327 Query: 1678 atgcgcgccgcctactcgctgcccaaggaaactgcgatggcgctcggggagagccccaag 1737 |||||||||||||||||||||||||||| | ||| |||||||||||||||||||| | Sbjct: 1328 atgcgcgccgcctactcgctgcccaaggccgccgcggcggcgctcggggagagccccagg 1387 Query: 1738 gtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaacctggag 1797 || |||||||||||||||||||||||| ||||||| || ||||||||||| ||||||||| Sbjct: 1388 gtgaagcccaggctgctcatcatcaagcggcaccggacgaggatgttcctgaacctggag 1447 Query: 1798 gagatcatcgccatggccgacgagct 1823 |||||||||| ||||||||| ||||| Sbjct: 1448 gagatcatcggcatggccgaggagct 1473
>gb|BT018710.1| Zea mays clone EL01N0516D02.d mRNA sequence Length = 1691 Score = 297 bits (150), Expect = 8e-77 Identities = 351/418 (83%) Strand = Plus / Plus Query: 1205 tgttcatggagcccgagggttcgcagagggacgaggtgtggaagatcaagccttacctgc 1264 ||||||||||||| | | ||||||||| || ||| ||||||| |||||||| |||| | Sbjct: 419 tgttcatggagcctgggcattcgcagagagatgagctgtggaaaatcaagccgtaccctc 478 Query: 1265 ggaaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcgagcaagg 1324 ||||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||| | Sbjct: 479 ggaaaggggacgagttctgccttagccatatcacggagctgacggtgaaatcaagcaaag 538 Query: 1325 tggccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctcaccggtt 1384 ||||| ||||||||| || |||||| |||||||| | |||||||| || || || || | Sbjct: 539 tggcccccgagtgcagcaagtaccatgacgtgcctgctgtgatcttttccctgacaggct 598 Query: 1385 acacggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcaccacggcca 1444 |||| || || || |||||||||||||| |||||||| || || || ||||| || || | Sbjct: 599 acactggaaatctgttccacgacttcactgacgtgatggtccctcttttcacgacagcaa 658 Query: 1445 gccagttcaacggcgaggtccagttcctcatcacggacatggcgctctggtggaccatca 1504 || |||||||||| || ||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 659 gcgagttcaacggagaagtccagttccttataacggacatggcgctctggtggacaatca 718 Query: 1505 agtaccacaccctgctccagaagttgttcaagtaccccttgatcgacttcagcaaggacg 1564 ||||||| ||| | || |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 719 agtaccataccgttcttgagaaactgtccaagtaccctgtgatcgatttcagcaaggacg 778 Query: 1565 atcaggtgcactgcttcaagcacgccatcatcggcacgcacgcctacatggagttcac 1622 ||||||||||||||||||| | |||| ||||| ||| ||||||||||||||||| Sbjct: 779 gcgaggtgcactgcttcaagcatgtcatcgtcggcctgcatgcctacatggagttcac 836 Score = 113 bits (57), Expect = 3e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 1735 aaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaacctg 1794 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 949 aaggtgaagcctaggctgctcatcatcaagaggcaccgcacaaggatgttcctcaacctg 1008 Query: 1795 gaggagatcatcgccatggccgacgagct 1823 || |||||||| || ||||| || ||||| Sbjct: 1009 gacgagatcattgcaatggctgaggagct 1037
>emb|AJ867397.1| Zea mays mRNA for glycosyltransferase (a2 gene) Length = 2089 Score = 297 bits (150), Expect = 8e-77 Identities = 351/418 (83%) Strand = Plus / Plus Query: 1205 tgttcatggagcccgagggttcgcagagggacgaggtgtggaagatcaagccttacctgc 1264 ||||||||||||| | | ||||||||| || ||| ||||||| |||||||| |||| | Sbjct: 819 tgttcatggagcctgggcattcgcagagagatgagctgtggaaaatcaagccgtaccctc 878 Query: 1265 ggaaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcgagcaagg 1324 ||||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||| | Sbjct: 879 ggaaaggggacgagttctgccttagccatatcacggagctgacggtgaaatcaagcaaag 938 Query: 1325 tggccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctcaccggtt 1384 ||||| ||||||||| || |||||| |||||||| | |||||||| || || || || | Sbjct: 939 tggcccccgagtgcagcaagtaccatgacgtgcctgctgtgatcttttccctgacaggct 998 Query: 1385 acacggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcaccacggcca 1444 |||| || || || |||||||||||||| |||||||| || || || ||||| || || | Sbjct: 999 acactggaaatctgttccacgacttcactgacgtgatggtccctcttttcacgacagcaa 1058 Query: 1445 gccagttcaacggcgaggtccagttcctcatcacggacatggcgctctggtggaccatca 1504 || |||||||||| || ||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 1059 gcgagttcaacggagaagtccagttccttataacggacatggcgctctggtggacaatca 1118 Query: 1505 agtaccacaccctgctccagaagttgttcaagtaccccttgatcgacttcagcaaggacg 1564 ||||||| ||| | || |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1119 agtaccataccgttcttgagaaactgtccaagtaccctgtgatcgatttcagcaaggacg 1178 Query: 1565 atcaggtgcactgcttcaagcacgccatcatcggcacgcacgcctacatggagttcac 1622 ||||||||||||||||||| | |||| ||||| ||| ||||||||||||||||| Sbjct: 1179 gcgaggtgcactgcttcaagcatgtcatcgtcggcctgcatgcctacatggagttcac 1236 Score = 113 bits (57), Expect = 3e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 1735 aaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaacctg 1794 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1349 aaggtgaagcctaggctgctcatcatcaagaggcaccgcacaaggatgttcctcaacctg 1408 Query: 1795 gaggagatcatcgccatggccgacgagct 1823 || |||||||| || ||||| || ||||| Sbjct: 1409 gacgagatcattgcaatggctgaggagct 1437
>emb|CT831207.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI241G20, full insert sequence Length = 2248 Score = 244 bits (123), Expect = 1e-60 Identities = 354/431 (82%) Strand = Plus / Plus Query: 1198 tcggtgttgttcatggagcccgagggttcgcagagggacgaggtgtggaagatcaagcct 1257 ||||| |||||||||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 941 tcggtcttgttcatggagcctgaaggttcgcagagggatgaggtgtggaagattaagcca 1000 Query: 1258 tacctgcggaaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcg 1317 |||| |||||||| || || |||||||||||||| ||||| ||| | || ||||| ||| Sbjct: 1001 taccctcggaaaggggatgaattctgcctcagccatatcactgaggtaaccgtgaaatcg 1060 Query: 1318 agcaaggtggccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctc 1377 ||||| ||||| | || ||||||| |||||||| ||||| | ||||||||||| || Sbjct: 1061 agcaaagtggcgcctgaatgcaccaaataccacgatgtgcctgctgtgatcttctcactg 1120 Query: 1378 accggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcacc 1437 ||||| |||||||||||||| ||||| || ||||| || ||| |||| || || ||||| Sbjct: 1121 accggctacacggggaacctgttccatgatttcactgatgtgctcgtccctcttttcacg 1180 Query: 1438 acggccagccagttcaacggcgaggtccagttcctcatcacggacatggcgctctggtgg 1497 || || ||| ||||||| || || || |||||||| || || |||||||| || |||||| Sbjct: 1181 accgcaagcgagttcaatggagaagttcagttccttataacagacatggcactttggtgg 1240 Query: 1498 accatcaagtaccacaccctgctccagaagttgttcaagtaccccttgatcgacttcagc 1557 || ||||||||||| || | ||||||||||| | |||||| || |||| || |||||| Sbjct: 1241 acgatcaagtaccagacagttctccagaagttatccaagtatcctgtgattgatttcagc 1300 Query: 1558 aaggacgatcaggtgcactgcttcaagcacgccatcatcggcacgcacgcctacatggag 1617 ||||| || || ||||||||||||||||| ||||| |||| ||| ||||| |||||| Sbjct: 1301 aaggatgaccaagtgcactgcttcaagcatgccattgtcgggctgcatgcctatatggag 1360 Query: 1618 ttcaccatcga 1628 ||||| ||||| Sbjct: 1361 ttcacaatcga 1371 Score = 91.7 bits (46), Expect = 1e-14 Identities = 82/94 (87%) Strand = Plus / Plus Query: 1731 ccccaaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaa 1790 ||||||| ||||||| ||| |||||||||||||||||||||| || || ||||| ||||| Sbjct: 1474 ccccaagatcaagccaaggttgctcatcatcaagaggcaccgtacaagaatgtttctcaa 1533 Query: 1791 cctggaggagatcatcgccatggccgacgagctt 1824 |||||| |||||||| ||||||| || |||||| Sbjct: 1534 cctggatgagatcatttccatggcggaggagctt 1567
>ref|NM_001057043.1| Oryza sativa (japonica cultivar-group) Os03g0567600 (Os03g0567600) mRNA, complete cds Length = 2820 Score = 244 bits (123), Expect = 1e-60 Identities = 354/431 (82%) Strand = Plus / Plus Query: 1198 tcggtgttgttcatggagcccgagggttcgcagagggacgaggtgtggaagatcaagcct 1257 ||||| |||||||||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 1514 tcggtcttgttcatggagcctgaaggttcgcagagggatgaggtgtggaagattaagccg 1573 Query: 1258 tacctgcggaaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcg 1317 |||| |||||||| || || |||||||||||||| ||||| ||| | || ||||| ||| Sbjct: 1574 taccctcggaaaggggatgaattctgcctcagccatatcactgaggtaaccgtgaaatcg 1633 Query: 1318 agcaaggtggccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctc 1377 ||||| ||||| | || ||||||| |||||||| ||||| | ||||||||||| || Sbjct: 1634 agcaaagtggcgcctgaatgcaccaaataccacgatgtgcctgctgtgatcttctcactg 1693 Query: 1378 accggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcacc 1437 ||||| |||||||||||||| ||||| || ||||| || ||| |||| || || ||||| Sbjct: 1694 accggctacacggggaacctgttccatgatttcactgatgtgctcgtccctcttttcacg 1753 Query: 1438 acggccagccagttcaacggcgaggtccagttcctcatcacggacatggcgctctggtgg 1497 || || ||| ||||||| || || || |||||||| || || |||||||| || |||||| Sbjct: 1754 actgcaagcgagttcaatggagaagttcagttccttataacagacatggcactttggtgg 1813 Query: 1498 accatcaagtaccacaccctgctccagaagttgttcaagtaccccttgatcgacttcagc 1557 || ||||||||||| || | ||||||||||| | |||||| || |||| || |||||| Sbjct: 1814 acgatcaagtaccagacagttctccagaagttatccaagtatcctgtgattgatttcagc 1873 Query: 1558 aaggacgatcaggtgcactgcttcaagcacgccatcatcggcacgcacgcctacatggag 1617 ||||| || || ||||||||||||||||| ||||| |||| ||| ||||| |||||| Sbjct: 1874 aaggatgaccaagtgcactgcttcaagcatgccattgtcgggctgcatgcctatatggag 1933 Query: 1618 ttcaccatcga 1628 ||||| ||||| Sbjct: 1934 ttcacaatcga 1944 Score = 91.7 bits (46), Expect = 1e-14 Identities = 82/94 (87%) Strand = Plus / Plus Query: 1731 ccccaaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaa 1790 ||||||| ||||||| ||| |||||||||||||||||||||| || || ||||| ||||| Sbjct: 2047 ccccaagatcaagccaaggttgctcatcatcaagaggcaccgtacaagaatgtttctcaa 2106 Query: 1791 cctggaggagatcatcgccatggccgacgagctt 1824 |||||| |||||||| ||||||| || |||||| Sbjct: 2107 cctggatgagatcatttccatggcagaggagctt 2140
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 244 bits (123), Expect = 1e-60 Identities = 354/431 (82%) Strand = Plus / Minus Query: 1198 tcggtgttgttcatggagcccgagggttcgcagagggacgaggtgtggaagatcaagcct 1257 ||||| |||||||||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 20317242 tcggtcttgttcatggagcctgaaggttcgcagagggatgaggtgtggaagattaagccg 20317183 Query: 1258 tacctgcggaaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcg 1317 |||| |||||||| || || |||||||||||||| ||||| ||| | || ||||| ||| Sbjct: 20317182 taccctcggaaaggggatgaattctgcctcagccatatcactgaggtaaccgtgaaatcg 20317123 Query: 1318 agcaaggtggccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctc 1377 ||||| ||||| | || ||||||| |||||||| ||||| | ||||||||||| || Sbjct: 20317122 agcaaagtggcgcctgaatgcaccaaataccacgatgtgcctgctgtgatcttctcactg 20317063 Query: 1378 accggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcacc 1437 ||||| |||||||||||||| ||||| || ||||| || ||| |||| || || ||||| Sbjct: 20317062 accggctacacggggaacctgttccatgatttcactgatgtgctcgtccctcttttcacg 20317003 Query: 1438 acggccagccagttcaacggcgaggtccagttcctcatcacggacatggcgctctggtgg 1497 || || ||| ||||||| || || || |||||||| || || |||||||| || |||||| Sbjct: 20317002 actgcaagcgagttcaatggagaagttcagttccttataacagacatggcactttggtgg 20316943 Query: 1498 accatcaagtaccacaccctgctccagaagttgttcaagtaccccttgatcgacttcagc 1557 || ||||||||||| || | ||||||||||| | |||||| || |||| || |||||| Sbjct: 20316942 acgatcaagtaccagacagttctccagaagttatccaagtatcctgtgattgatttcagc 20316883 Query: 1558 aaggacgatcaggtgcactgcttcaagcacgccatcatcggcacgcacgcctacatggag 1617 ||||| || || ||||||||||||||||| ||||| |||| ||| ||||| |||||| Sbjct: 20316882 aaggatgaccaagtgcactgcttcaagcatgccattgtcgggctgcatgcctatatggag 20316823 Query: 1618 ttcaccatcga 1628 ||||| ||||| Sbjct: 20316822 ttcacaatcga 20316812 Score = 91.7 bits (46), Expect = 1e-14 Identities = 82/94 (87%) Strand = Plus / Minus Query: 1731 ccccaaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaa 1790 ||||||| ||||||| ||| |||||||||||||||||||||| || || ||||| ||||| Sbjct: 20316709 ccccaagatcaagccaaggttgctcatcatcaagaggcaccgtacaagaatgtttctcaa 20316650 Query: 1791 cctggaggagatcatcgccatggccgacgagctt 1824 |||||| |||||||| ||||||| || |||||| Sbjct: 20316649 cctggatgagatcatttccatggcagaggagctt 20316616
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete sequence Length = 156929 Score = 244 bits (123), Expect = 1e-60 Identities = 354/431 (82%) Strand = Plus / Minus Query: 1198 tcggtgttgttcatggagcccgagggttcgcagagggacgaggtgtggaagatcaagcct 1257 ||||| |||||||||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 119520 tcggtcttgttcatggagcctgaaggttcgcagagggatgaggtgtggaagattaagccg 119461 Query: 1258 tacctgcggaaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcg 1317 |||| |||||||| || || |||||||||||||| ||||| ||| | || ||||| ||| Sbjct: 119460 taccctcggaaaggggatgaattctgcctcagccatatcactgaggtaaccgtgaaatcg 119401 Query: 1318 agcaaggtggccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctc 1377 ||||| ||||| | || ||||||| |||||||| ||||| | ||||||||||| || Sbjct: 119400 agcaaagtggcgcctgaatgcaccaaataccacgatgtgcctgctgtgatcttctcactg 119341 Query: 1378 accggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcacc 1437 ||||| |||||||||||||| ||||| || ||||| || ||| |||| || || ||||| Sbjct: 119340 accggctacacggggaacctgttccatgatttcactgatgtgctcgtccctcttttcacg 119281 Query: 1438 acggccagccagttcaacggcgaggtccagttcctcatcacggacatggcgctctggtgg 1497 || || ||| ||||||| || || || |||||||| || || |||||||| || |||||| Sbjct: 119280 actgcaagcgagttcaatggagaagttcagttccttataacagacatggcactttggtgg 119221 Query: 1498 accatcaagtaccacaccctgctccagaagttgttcaagtaccccttgatcgacttcagc 1557 || ||||||||||| || | ||||||||||| | |||||| || |||| || |||||| Sbjct: 119220 acgatcaagtaccagacagttctccagaagttatccaagtatcctgtgattgatttcagc 119161 Query: 1558 aaggacgatcaggtgcactgcttcaagcacgccatcatcggcacgcacgcctacatggag 1617 ||||| || || ||||||||||||||||| ||||| |||| ||| ||||| |||||| Sbjct: 119160 aaggatgaccaagtgcactgcttcaagcatgccattgtcgggctgcatgcctatatggag 119101 Query: 1618 ttcaccatcga 1628 ||||| ||||| Sbjct: 119100 ttcacaatcga 119090 Score = 91.7 bits (46), Expect = 1e-14 Identities = 82/94 (87%) Strand = Plus / Minus Query: 1731 ccccaaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaa 1790 ||||||| ||||||| ||| |||||||||||||||||||||| || || ||||| ||||| Sbjct: 118987 ccccaagatcaagccaaggttgctcatcatcaagaggcaccgtacaagaatgtttctcaa 118928 Query: 1791 cctggaggagatcatcgccatggccgacgagctt 1824 |||||| |||||||| ||||||| || |||||| Sbjct: 118927 cctggatgagatcatttccatggcagaggagctt 118894
>dbj|AK119180.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-G11, full insert sequence Length = 1525 Score = 244 bits (123), Expect = 1e-60 Identities = 354/431 (82%) Strand = Plus / Plus Query: 1198 tcggtgttgttcatggagcccgagggttcgcagagggacgaggtgtggaagatcaagcct 1257 ||||| |||||||||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 217 tcggtcttgttcatggagcctgaaggttcgcagagggatgaggtgtggaagattaagccg 276 Query: 1258 tacctgcggaaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcg 1317 |||| |||||||| || || |||||||||||||| ||||| ||| | || ||||| ||| Sbjct: 277 taccctcggaaaggggatgaattctgcctcagccatatcactgaggtaaccgtgaaatcg 336 Query: 1318 agcaaggtggccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctc 1377 ||||| ||||| | || ||||||| |||||||| ||||| | ||||||||||| || Sbjct: 337 agcaaagtggcgcctgaatgcaccaaataccacgatgtgcctgctgtgatcttctcactg 396 Query: 1378 accggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcacc 1437 ||||| |||||||||||||| ||||| || ||||| || ||| |||| || || ||||| Sbjct: 397 accggctacacggggaacctgttccatgatttcactgatgtgctcgtccctcttttcacg 456 Query: 1438 acggccagccagttcaacggcgaggtccagttcctcatcacggacatggcgctctggtgg 1497 || || ||| ||||||| || || || |||||||| || || |||||||| || |||||| Sbjct: 457 actgcaagcgagttcaatggagaagttcagttccttataacagacatggcactttggtgg 516 Query: 1498 accatcaagtaccacaccctgctccagaagttgttcaagtaccccttgatcgacttcagc 1557 || ||||||||||| || | ||||||||||| | |||||| || |||| || |||||| Sbjct: 517 acgatcaagtaccagacagttctccagaagttatccaagtatcctgtgattgatttcagc 576 Query: 1558 aaggacgatcaggtgcactgcttcaagcacgccatcatcggcacgcacgcctacatggag 1617 ||||| || || ||||||||||||||||| ||||| |||| ||| ||||| |||||| Sbjct: 577 aaggatgaccaagtgcactgcttcaagcatgccattgtcgggctgcatgcctatatggag 636 Query: 1618 ttcaccatcga 1628 ||||| ||||| Sbjct: 637 ttcacaatcga 647 Score = 91.7 bits (46), Expect = 1e-14 Identities = 82/94 (87%) Strand = Plus / Plus Query: 1731 ccccaaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaa 1790 ||||||| ||||||| ||| |||||||||||||||||||||| || || ||||| ||||| Sbjct: 750 ccccaagatcaagccaaggttgctcatcatcaagaggcaccgtacaagaatgtttctcaa 809 Query: 1791 cctggaggagatcatcgccatggccgacgagctt 1824 |||||| |||||||| ||||||| || |||||| Sbjct: 810 cctggatgagatcatttccatggcagaggagctt 843
>dbj|AK100305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078F15, full insert sequence Length = 2821 Score = 244 bits (123), Expect = 1e-60 Identities = 354/431 (82%) Strand = Plus / Plus Query: 1198 tcggtgttgttcatggagcccgagggttcgcagagggacgaggtgtggaagatcaagcct 1257 ||||| |||||||||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 1515 tcggtcttgttcatggagcctgaaggttcgcagagggatgaggtgtggaagattaagccg 1574 Query: 1258 tacctgcggaaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcg 1317 |||| |||||||| || || |||||||||||||| ||||| ||| | || ||||| ||| Sbjct: 1575 taccctcggaaaggggatgaattctgcctcagccatatcactgaggtaaccgtgaaatcg 1634 Query: 1318 agcaaggtggccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctc 1377 ||||| ||||| | || ||||||| |||||||| ||||| | ||||||||||| || Sbjct: 1635 agcaaagtggcgcctgaatgcaccaaataccacgatgtgcctgctgtgatcttctcactg 1694 Query: 1378 accggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcacc 1437 ||||| |||||||||||||| ||||| || ||||| || ||| |||| || || ||||| Sbjct: 1695 accggctacacggggaacctgttccatgatttcactgatgtgctcgtccctcttttcacg 1754 Query: 1438 acggccagccagttcaacggcgaggtccagttcctcatcacggacatggcgctctggtgg 1497 || || ||| ||||||| || || || |||||||| || || |||||||| || |||||| Sbjct: 1755 actgcaagcgagttcaatggagaagttcagttccttataacagacatggcactttggtgg 1814 Query: 1498 accatcaagtaccacaccctgctccagaagttgttcaagtaccccttgatcgacttcagc 1557 || ||||||||||| || | ||||||||||| | |||||| || |||| || |||||| Sbjct: 1815 acgatcaagtaccagacagttctccagaagttatccaagtatcctgtgattgatttcagc 1874 Query: 1558 aaggacgatcaggtgcactgcttcaagcacgccatcatcggcacgcacgcctacatggag 1617 ||||| || || ||||||||||||||||| ||||| |||| ||| ||||| |||||| Sbjct: 1875 aaggatgaccaagtgcactgcttcaagcatgccattgtcgggctgcatgcctatatggag 1934 Query: 1618 ttcaccatcga 1628 ||||| ||||| Sbjct: 1935 ttcacaatcga 1945 Score = 91.7 bits (46), Expect = 1e-14 Identities = 82/94 (87%) Strand = Plus / Plus Query: 1731 ccccaaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaa 1790 ||||||| ||||||| ||| |||||||||||||||||||||| || || ||||| ||||| Sbjct: 2048 ccccaagatcaagccaaggttgctcatcatcaagaggcaccgtacaagaatgtttctcaa 2107 Query: 1791 cctggaggagatcatcgccatggccgacgagctt 1824 |||||| |||||||| ||||||| || |||||| Sbjct: 2108 cctggatgagatcatttccatggcagaggagctt 2141
>dbj|AK098896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A01, full insert sequence Length = 1926 Score = 244 bits (123), Expect = 1e-60 Identities = 354/431 (82%) Strand = Plus / Plus Query: 1198 tcggtgttgttcatggagcccgagggttcgcagagggacgaggtgtggaagatcaagcct 1257 ||||| |||||||||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 722 tcggtcttgttcatggagcctgaaggttcgcagagggatgaggtgtggaagattaagccg 781 Query: 1258 tacctgcggaaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcg 1317 |||| |||||||| || || |||||||||||||| ||||| ||| | || ||||| ||| Sbjct: 782 taccctcggaaaggggatgaattctgcctcagccatatcactgaggtaaccgtgaaatcg 841 Query: 1318 agcaaggtggccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctc 1377 ||||| ||||| | || ||||||| |||||||| ||||| | ||||||||||| || Sbjct: 842 agcaaagtggcgcctgaatgcaccaaataccacgatgtgcctgctgtgatcttctcactg 901 Query: 1378 accggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcacc 1437 ||||| |||||||||||||| ||||| || ||||| || ||| |||| || || ||||| Sbjct: 902 accggctacacggggaacctgttccatgatttcactgatgtgctcgtccctcttttcacg 961 Query: 1438 acggccagccagttcaacggcgaggtccagttcctcatcacggacatggcgctctggtgg 1497 || || ||| ||||||| || || || |||||||| || || |||||||| || |||||| Sbjct: 962 actgcaagcgagttcaatggagaagttcagttccttataacagacatggcactttggtgg 1021 Query: 1498 accatcaagtaccacaccctgctccagaagttgttcaagtaccccttgatcgacttcagc 1557 || ||||||||||| || | ||||||||||| | |||||| || |||| || |||||| Sbjct: 1022 acgatcaagtaccagacagttctccagaagttatccaagtatcctgtgattgatttcagc 1081 Query: 1558 aaggacgatcaggtgcactgcttcaagcacgccatcatcggcacgcacgcctacatggag 1617 ||||| || || ||||||||||||||||| ||||| |||| ||| ||||| |||||| Sbjct: 1082 aaggatgaccaagtgcactgcttcaagcatgccattgtcgggctgcatgcctatatggag 1141 Query: 1618 ttcaccatcga 1628 ||||| ||||| Sbjct: 1142 ttcacaatcga 1152 Score = 91.7 bits (46), Expect = 1e-14 Identities = 82/94 (87%) Strand = Plus / Plus Query: 1731 ccccaaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaa 1790 ||||||| ||||||| ||| |||||||||||||||||||||| || || ||||| ||||| Sbjct: 1255 ccccaagatcaagccaaggttgctcatcatcaagaggcaccgtacaagaatgtttctcaa 1314 Query: 1791 cctggaggagatcatcgccatggccgacgagctt 1824 |||||| |||||||| ||||||| || |||||| Sbjct: 1315 cctggatgagatcatttccatggcagaggagctt 1348
>dbj|AK065135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A03, full insert sequence Length = 1927 Score = 244 bits (123), Expect = 1e-60 Identities = 354/431 (82%) Strand = Plus / Plus Query: 1198 tcggtgttgttcatggagcccgagggttcgcagagggacgaggtgtggaagatcaagcct 1257 ||||| |||||||||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 723 tcggtcttgttcatggagcctgaaggttcgcagagggatgaggtgtggaagattaagccg 782 Query: 1258 tacctgcggaaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcg 1317 |||| |||||||| || || |||||||||||||| ||||| ||| | || ||||| ||| Sbjct: 783 taccctcggaaaggggatgaattctgcctcagccatatcactgaggtaaccgtgaaatcg 842 Query: 1318 agcaaggtggccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctc 1377 ||||| ||||| | || ||||||| |||||||| ||||| | ||||||||||| || Sbjct: 843 agcaaagtggcgcctgaatgcaccaaataccacgatgtgcctgctgtgatcttctcactg 902 Query: 1378 accggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcacc 1437 ||||| |||||||||||||| ||||| || ||||| || ||| |||| || || ||||| Sbjct: 903 accggctacacggggaacctgttccatgatttcactgatgtgctcgtccctcttttcacg 962 Query: 1438 acggccagccagttcaacggcgaggtccagttcctcatcacggacatggcgctctggtgg 1497 || || ||| ||||||| || || || |||||||| || || |||||||| || |||||| Sbjct: 963 actgcaagcgagttcaatggagaagttcagttccttataacagacatggcactttggtgg 1022 Query: 1498 accatcaagtaccacaccctgctccagaagttgttcaagtaccccttgatcgacttcagc 1557 || ||||||||||| || | ||||||||||| | |||||| || |||| || |||||| Sbjct: 1023 acgatcaagtaccagacagttctccagaagttatccaagtatcctgtgattgatttcagc 1082 Query: 1558 aaggacgatcaggtgcactgcttcaagcacgccatcatcggcacgcacgcctacatggag 1617 ||||| || || ||||||||||||||||| ||||| |||| ||| ||||| |||||| Sbjct: 1083 aaggatgaccaagtgcactgcttcaagcatgccattgtcgggctgcatgcctatatggag 1142 Query: 1618 ttcaccatcga 1628 ||||| ||||| Sbjct: 1143 ttcacaatcga 1153 Score = 91.7 bits (46), Expect = 1e-14 Identities = 82/94 (87%) Strand = Plus / Plus Query: 1731 ccccaaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaa 1790 ||||||| ||||||| ||| |||||||||||||||||||||| || || ||||| ||||| Sbjct: 1256 ccccaagatcaagccaaggttgctcatcatcaagaggcaccgtacaagaatgtttctcaa 1315 Query: 1791 cctggaggagatcatcgccatggccgacgagctt 1824 |||||| |||||||| ||||||| || |||||| Sbjct: 1316 cctggatgagatcatttccatggcagaggagctt 1349
>emb|AJ867396.1| Saccharum officinarum mRNA for glycosyltransferase (a2 gene) Length = 2199 Score = 190 bits (96), Expect = 1e-44 Identities = 282/344 (81%) Strand = Plus / Plus Query: 1243 tggaagatcaagccttacctgcggaaaggcgacgagttctgcctcagccacatcacggag 1302 ||||| || ||||| |||| |||||||| |||||||||||||| ||||| ||||| ||| Sbjct: 967 tggaaaattaagccataccctcggaaaggggacgagttctgccttagccatatcactgag 1026 Query: 1303 ctgacggtgaagtcgagcaaggtggccgccgagtgcaccaggtaccacgacgtgcccgtg 1362 ||||| ||||| || ||||| |||||| | |||||||||| ||||||||||||||| | Sbjct: 1027 ctgacagtgaaatcaagcaaagtggccccagagtgcaccaagtaccacgacgtgcctgcc 1086 Query: 1363 gtgatcttctcgctcaccggttacacggggaacctcttccacgacttcaccgacgtgatc 1422 |||||||| || || || || || || || || || ||||| |||||||| |||||||| Sbjct: 1087 gtgatcttttcactgacaggctatactggaaatctgttccatgacttcactgacgtgatg 1146 Query: 1423 gtgccgctcttcaccacggccagccagttcaacggcgaggtccagttcctcatcacggac 1482 || || || ||||| || || ||| |||| || || || || |||||||| || || ||| Sbjct: 1147 gtccctcttttcacgacagcaagcgagtttaatggagaagttcagttccttataacagac 1206 Query: 1483 atggcgctctggtggaccatcaagtaccacaccctgctccagaagttgttcaagtacccc 1542 ||||| || |||||||| |||||||||||||| |||| |||||| ||| ||||||||| Sbjct: 1207 atggcactttggtggacaatcaagtaccacactgtgcttcagaagctgtccaagtaccct 1266 Query: 1543 ttgatcgacttcagcaaggacgatcaggtgcactgcttcaagca 1586 | || || ||||||||||| || |||||||||||||||||||| Sbjct: 1267 gtcattgatttcagcaaggatgaccaggtgcactgcttcaagca 1310 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 1735 aaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaacctg 1794 ||||||||||| || ||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 1459 aaggtcaagccaagattgctcataatcaagaggcaccgtacaaggatgttccttaacctc 1518 Query: 1795 gaggagatcatcgccatggccgacgagct 1823 || |||||||| || ||||| || ||||| Sbjct: 1519 gatgagatcattgcaatggctgaggagct 1547
>emb|AJ867395.1| Sorghum bicolor mRNA for glycosyltransferase (a2 gene) Length = 2054 Score = 180 bits (91), Expect = 1e-41 Identities = 295/363 (81%) Strand = Plus / Plus Query: 1224 ttcgcagagggacgaggtgtggaagatcaagccttacctgcggaaaggcgacgagttctg 1283 ||||||||| || ||| ||||||| || ||||| |||| |||||||| ||||||||||| Sbjct: 797 ttcgcagagagatgagctgtggaaaattaagccataccctcggaaaggagacgagttctg 856 Query: 1284 cctcagccacatcacggagctgacggtgaagtcgagcaaggtggccgccgagtgcaccag 1343 ||| ||||| ||||| |||||||| || || || ||||| |||||| | |||||||||| Sbjct: 857 ccttagccatatcactgagctgacagtaaaatcaagcaaagtggccccagagtgcaccaa 916 Query: 1344 gtaccacgacgtgcccgtggtgatcttctcgctcaccggttacacggggaacctcttcca 1403 |||||| ||| |||| | |||||||| || || || || || || || || || ||||| Sbjct: 917 gtaccatgacatgcctgctgtgatcttttccctgacaggctatactggaaatctgttcca 976 Query: 1404 cgacttcaccgacgtgatcgtgccgctcttcaccacggccagccagttcaacggcgaggt 1463 |||||||| |||||||| || || || ||||| || || || |||| || || || || Sbjct: 977 tgacttcactgacgtgatggtccctcttttcacgacagcaagtgagtttaatggagaagt 1036 Query: 1464 ccagttcctcatcacggacatggcgctctggtggaccatcaagtaccacaccctgctcca 1523 |||||||| || ||||||||||| || |||||||| |||||||||||||| |||| || Sbjct: 1037 tcagttccttataacggacatggcactttggtggacaatcaagtaccacactgtgcttca 1096 Query: 1524 gaagttgttcaagtaccccttgatcgacttcagcaaggacgatcaggtgcactgcttcaa 1583 |||| ||| ||||||||| | || || ||||||||||| || ||||||||||||||||| Sbjct: 1097 gaagctgtccaagtaccctgtcattgatttcagcaaggatgaccaggtgcactgcttcaa 1156 Query: 1584 gca 1586 ||| Sbjct: 1157 gca 1159 Score = 81.8 bits (41), Expect = 9e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 1735 aaggtcaagcccaggctgctcatcatcaagaggcaccgcaccaggatgttcctcaacctg 1794 ||||||||||| ||| |||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 1308 aaggtcaagccaaggttgctcatcatcaagaggcaccgtacaaggatgttccttaacctt 1367 Query: 1795 gaggagatc 1803 || |||||| Sbjct: 1368 gatgagatc 1376
>emb|AJ867394.1| Triticum aestivum partial mRNA for glycosyltransferase (a2b gene) Length = 1667 Score = 129 bits (65), Expect = 4e-26 Identities = 182/221 (82%) Strand = Plus / Plus Query: 1267 aaaggcgacgagttctgcctcagccacatcacggagctgacggtgaagtcgagcaaggtg 1326 ||||| || ||| ||||||||||| | | || |||||||||||||| || ||||||||| Sbjct: 422 aaaggtgatgagctctgcctcagcaaagttacagagctgacggtgaaatcaagcaaggtg 481 Query: 1327 gccgccgagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctcaccggttac 1386 || | ||||| |||| ||||||| | |||||||| ||| |||| | || || || ||| Sbjct: 482 gcacctgagtgtaccaagtaccacaatgtgcccgtcgtggtctttgctctgactggatac 541 Query: 1387 acggggaacctcttccacgacttcaccgacgtgatcgtgccgctcttcaccacggccagc 1446 || || ||||| ||||||||||||||||||| | | || || |||||||| ||||| ||| Sbjct: 542 accggaaacctgttccacgacttcaccgacgcgcttgtccccctcttcacgacggcaagc 601 Query: 1447 cagttcaacggcgaggtccagttcctcatcacggacatggc 1487 ||||||| ||||||||||||||||||||||| || ||||| Sbjct: 602 gagttcaatggcgaggtccagttcctcatcacagatatggc 642 Score = 81.8 bits (41), Expect = 9e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 1717 gcgctcggggagagccccaaggtcaagcccaggctgctcatcatcaagaggcaccgcacc 1776 |||||||| |||| |||||||| |||||| ||||||||||||||| |||||| | || Sbjct: 872 gcgctcggcgagatccccaaggccaagccgaggctgctcatcatctcgaggcagagaaca 931 Query: 1777 aggatgttcctcaacctggaggagatcatcgccatggccga 1817 || |||||||||||||| |||||||||||| |||||||| Sbjct: 932 agaatgttcctcaacctcccggagatcatcgcaatggccga 972 Score = 46.1 bits (23), Expect = 0.51 Identities = 62/75 (82%) Strand = Plus / Plus Query: 1609 tacatggagttcaccatcgatgcctccaagtcgccgcacggcgtcaccatggtcgatttc 1668 ||||||||||||||||| || |||||||| | || ||| | ||||||||| |||||| Sbjct: 764 tacatggagttcaccattgacccctccaaggctcctcacaactacaccatggtggatttc 823 Query: 1669 aaccggttcatgcgc 1683 ||| | ||||||||| Sbjct: 824 aacagattcatgcgc 838
>emb|CT833269.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA228I08, full insert sequence Length = 2174 Score = 75.8 bits (38), Expect = 6e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 1369 ttctcgctcaccggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccg 1428 |||||| ||| ||| |||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 1011 ttctcgatcagcgggtacacgggcaacctgttccacgacttcaccgacgtgatcgtcccg 1070 Query: 1429 ct 1430 || Sbjct: 1071 ct 1072
>ref|NM_001073002.1| Oryza sativa (japonica cultivar-group) Os12g0238900 (Os12g0238900) mRNA, partial cds Length = 1832 Score = 75.8 bits (38), Expect = 6e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 1369 ttctcgctcaccggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccg 1428 |||||| ||| ||| |||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 701 ttctcgatcagcgggtacacgggcaacctgttccacgacttcaccgacgtgatcgtcccg 760 Query: 1429 ct 1430 || Sbjct: 761 ct 762
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 75.8 bits (38), Expect = 6e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 1369 ttctcgctcaccggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccg 1428 |||||| ||| ||| |||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 7667427 ttctcgatcagcgggtacacgggcaacctgttccacgacttcaccgacgtgatcgtcccg 7667486 Query: 1429 ct 1430 || Sbjct: 7667487 ct 7667488
>dbj|AK109804.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-F10, full insert sequence Length = 1831 Score = 75.8 bits (38), Expect = 6e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 1369 ttctcgctcaccggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccg 1428 |||||| ||| ||| |||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 701 ttctcgatcagcgggtacacgggcaacctgttccacgacttcaccgacgtgatcgtcccg 760 Query: 1429 ct 1430 || Sbjct: 761 ct 762
>emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb0001P17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151024 Score = 75.8 bits (38), Expect = 6e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 1369 ttctcgctcaccggttacacggggaacctcttccacgacttcaccgacgtgatcgtgccg 1428 |||||| ||| ||| |||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 54820 ttctcgatcagcgggtacacgggcaacctgttccacgacttcaccgacgtgatcgtcccg 54879 Query: 1429 ct 1430 || Sbjct: 54880 ct 54881
>ref|NM_001048395.1| Oryza sativa (japonica cultivar-group) Os01g0118400 (Os01g0118400) mRNA, complete cds Length = 1569 Score = 69.9 bits (35), Expect = 4e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 1384 tacacggggaacctcttccacgacttcaccgacgtgatcgtgccgct 1430 |||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct: 685 tacacgggcaacatcttccacgacttctccgacgtgatcgtgccgct 731
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 69.9 bits (35), Expect = 4e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 1384 tacacggggaacctcttccacgacttcaccgacgtgatcgtgccgct 1430 |||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct: 1057287 tacacgggcaacatcttccacgacttctccgacgtgatcgtgccgct 1057241
>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0494A10 Length = 145576 Score = 69.9 bits (35), Expect = 4e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 1384 tacacggggaacctcttccacgacttcaccgacgtgatcgtgccgct 1430 |||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct: 94955 tacacgggcaacatcttccacgacttctccgacgtgatcgtgccgct 94909
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 69.9 bits (35), Expect = 4e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 1384 tacacggggaacctcttccacgacttcaccgacgtgatcgtgccgct 1430 |||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct: 26601 tacacgggcaacatcttccacgacttctccgacgtgatcgtgccgct 26555
>emb|CR855152.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0099L20, complete sequence Length = 82575 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Minus Query: 681 agttgtcaccaatcctcgtattctagtattattcaaaatgtcaagcaaaactatatgcct 740 |||| |||||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 61662 agttttcaccagtcctcatattctagtattatccaaaatgtgaagcaaaattatatccct 61603 Query: 741 cc 742 || Sbjct: 61602 cc 61601 Score = 63.9 bits (32), Expect = 2e-06 Identities = 71/84 (84%) Strand = Plus / Minus Query: 457 tgcttgattacttgtcttccacacgccgacaaggacaccgatgagatgtatgcacagatg 516 ||||||||| |||| || |||| |||||||||||||| ||||| | |||||||||||| Sbjct: 64087 tgcttgattgtttgttttgcacaggccgacaaggacactgatgaagtttatgcacagatg 64028 Query: 517 actcttcaaccagcgaactctgta 540 || ||||| |||| ||||||||| Sbjct: 64027 acccttcagccagtaaactctgta 64004 Score = 60.0 bits (30), Expect = 3e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 311 cccgcatcccgaactacccgagcatgtcgtcccagctgctgtgccaagttcacaacatca 370 ||||||| ||||||||||| | | || | || ||| ||||||| |||||||||||||||| Sbjct: 64211 cccgcattccgaactacccaaacctgccatctcagttgctgtgtcaagttcacaacatca 64152 Query: 371 ccatgcatgt 380 || ||||||| Sbjct: 64151 ccttgcatgt 64142
>ref|NM_001060704.1| Oryza sativa (japonica cultivar-group) Os04g0664400 (Os04g0664400) mRNA, complete cds Length = 3828 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 681 agttgtcaccaatcctcgtattctagtattattcaaaatgtcaagcaaaactatatgcct 740 |||| |||||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 1886 agttttcaccagtcctcatattctagtattatccaaaatgtgaagcaaaattatatccct 1945 Query: 741 cc 742 || Sbjct: 1946 cc 1947 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Plus Query: 311 cccgcatcccgaactacccgagcatgtcgtcccagctgctgtgccaagttcacaacatca 370 ||||||| ||||||||||| | | || | || ||| ||||||| |||||||||||||||| Sbjct: 774 cccgcattccgaactacccaaacctgccatctcagttgctgtgtcaagttcacaacatca 833 Query: 371 ccatgcatg 379 || |||||| Sbjct: 834 ccttgcatg 842 Score = 52.0 bits (26), Expect = 0.008 Identities = 50/58 (86%) Strand = Plus / Plus Query: 481 gccgacaaggacaccgatgagatgtatgcacagatgactcttcaaccagcgaactctg 538 |||||||||||||| ||||| | |||||||||||||| ||||| |||| ||||||| Sbjct: 842 gccgacaaggacactgatgaagtttatgcacagatgacccttcagccagtaaactctg 899
>ref|NM_001053255.1| Oryza sativa (japonica cultivar-group) Os02g0330200 (Os02g0330200) mRNA, complete cds Length = 2161 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1533 caagtaccccttgatcgacttcagcaaggacgatcaggtgcactgcttcaagca 1586 ||||||||||||||| ||||||| ||| |||||||| ||||| ||||||||||| Sbjct: 1185 caagtaccccttgattgacttcaacaatgacgatcaagtgcattgcttcaagca 1238 Score = 42.1 bits (21), Expect = 8.0 Identities = 72/89 (80%) Strand = Plus / Plus Query: 1399 ttccacgacttcaccgacgtgatcgtgccgctcttcaccacggccagccagttcaacggc 1458 ||||| ||||||||||||||| | || || || ||||| || || ||| | ||||| ||| Sbjct: 1051 ttccatgacttcaccgacgtgcttgtccctcttttcacaaccgcaagcgaattcaatggc 1110 Query: 1459 gaggtccagttcctcatcacggacatggc 1487 || || || ||||| ||||| |||||||| Sbjct: 1111 gaagttcaattcctaatcacagacatggc 1139
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Minus Query: 681 agttgtcaccaatcctcgtattctagtattattcaaaatgtcaagcaaaactatatgcct 740 |||| |||||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 33923972 agttttcaccagtcctcatattctagtattatccaaaatgtgaagcaaaattatatccct 33923913 Query: 741 cc 742 || Sbjct: 33923912 cc 33923911 Score = 63.9 bits (32), Expect = 2e-06 Identities = 71/84 (84%) Strand = Plus / Minus Query: 457 tgcttgattacttgtcttccacacgccgacaaggacaccgatgagatgtatgcacagatg 516 ||||||||| |||| || |||| |||||||||||||| ||||| | |||||||||||| Sbjct: 33926397 tgcttgattgtttgttttgcacaggccgacaaggacactgatgaagtttatgcacagatg 33926338 Query: 517 actcttcaaccagcgaactctgta 540 || ||||| |||| ||||||||| Sbjct: 33926337 acccttcagccagtaaactctgta 33926314 Score = 60.0 bits (30), Expect = 3e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 311 cccgcatcccgaactacccgagcatgtcgtcccagctgctgtgccaagttcacaacatca 370 ||||||| ||||||||||| | | || | || ||| ||||||| |||||||||||||||| Sbjct: 33926521 cccgcattccgaactacccaaacctgccatctcagttgctgtgtcaagttcacaacatca 33926462 Query: 371 ccatgcatgt 380 || ||||||| Sbjct: 33926461 ccttgcatgt 33926452 Score = 52.0 bits (26), Expect = 0.008 Identities = 32/34 (94%) Strand = Plus / Minus Query: 1402 cacgacttcaccgacgtgatcgtgccgctcttca 1435 |||||||||||||||||| |||| |||||||||| Sbjct: 6558986 cacgacttcaccgacgtgctcgtcccgctcttca 6558953 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 710 tattcaaaatgtcaagcaaaa 730 ||||||||||||||||||||| Sbjct: 4203128 tattcaaaatgtcaagcaaaa 4203108
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1533 caagtaccccttgatcgacttcagcaaggacgatcaggtgcactgcttcaagca 1586 ||||||||||||||| ||||||| ||| |||||||| ||||| ||||||||||| Sbjct: 13418196 caagtaccccttgattgacttcaacaatgacgatcaagtgcattgcttcaagca 13418249 Score = 50.1 bits (25), Expect = 0.033 Identities = 25/25 (100%) Strand = Plus / Minus Query: 505 tatgcacagatgactcttcaaccag 529 ||||||||||||||||||||||||| Sbjct: 2212829 tatgcacagatgactcttcaaccag 2212805 Score = 42.1 bits (21), Expect = 8.0 Identities = 72/89 (80%) Strand = Plus / Plus Query: 1399 ttccacgacttcaccgacgtgatcgtgccgctcttcaccacggccagccagttcaacggc 1458 ||||| ||||||||||||||| | || || || ||||| || || ||| | ||||| ||| Sbjct: 13418062 ttccatgacttcaccgacgtgcttgtccctcttttcacaaccgcaagcgaattcaatggc 13418121 Query: 1459 gaggtccagttcctcatcacggacatggc 1487 || || || ||||| ||||| |||||||| Sbjct: 13418122 gaagttcaattcctaatcacagacatggc 13418150 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2001 gcaagttttaaaatcaaccca 2021 ||||||||||||||||||||| Sbjct: 27880272 gcaagttttaaaatcaaccca 27880252
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Minus Query: 681 agttgtcaccaatcctcgtattctagtattattcaaaatgtcaagcaaaactatatgcct 740 |||| |||||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 135871 agttttcaccagtcctcatattctagtattatccaaaatgtgaagcaaaattatatccct 135812 Query: 741 cc 742 || Sbjct: 135811 cc 135810 Score = 63.9 bits (32), Expect = 2e-06 Identities = 71/84 (84%) Strand = Plus / Minus Query: 457 tgcttgattacttgtcttccacacgccgacaaggacaccgatgagatgtatgcacagatg 516 ||||||||| |||| || |||| |||||||||||||| ||||| | |||||||||||| Sbjct: 138296 tgcttgattgtttgttttgcacaggccgacaaggacactgatgaagtttatgcacagatg 138237 Query: 517 actcttcaaccagcgaactctgta 540 || ||||| |||| ||||||||| Sbjct: 138236 acccttcagccagtaaactctgta 138213 Score = 60.0 bits (30), Expect = 3e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 311 cccgcatcccgaactacccgagcatgtcgtcccagctgctgtgccaagttcacaacatca 370 ||||||| ||||||||||| | | || | || ||| ||||||| |||||||||||||||| Sbjct: 138420 cccgcattccgaactacccaaacctgccatctcagttgctgtgtcaagttcacaacatca 138361 Query: 371 ccatgcatgt 380 || ||||||| Sbjct: 138360 ccttgcatgt 138351
>dbj|AP004177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E03 Length = 126845 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1533 caagtaccccttgatcgacttcagcaaggacgatcaggtgcactgcttcaagca 1586 ||||||||||||||| ||||||| ||| |||||||| ||||| ||||||||||| Sbjct: 4125 caagtaccccttgattgacttcaacaatgacgatcaagtgcattgcttcaagca 4178 Score = 42.1 bits (21), Expect = 8.0 Identities = 72/89 (80%) Strand = Plus / Plus Query: 1399 ttccacgacttcaccgacgtgatcgtgccgctcttcaccacggccagccagttcaacggc 1458 ||||| ||||||||||||||| | || || || ||||| || || ||| | ||||| ||| Sbjct: 3991 ttccatgacttcaccgacgtgcttgtccctcttttcacaaccgcaagcgaattcaatggc 4050 Query: 1459 gaggtccagttcctcatcacggacatggc 1487 || || || ||||| ||||| |||||||| Sbjct: 4051 gaagttcaattcctaatcacagacatggc 4079
>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1521_G01 Length = 144102 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1533 caagtaccccttgatcgacttcagcaaggacgatcaggtgcactgcttcaagca 1586 ||||||||||||||| ||||||| ||| |||||||| ||||| ||||||||||| Sbjct: 143447 caagtaccccttgattgacttcaacaatgacgatcaagtgcattgcttcaagca 143500 Score = 42.1 bits (21), Expect = 8.0 Identities = 72/89 (80%) Strand = Plus / Plus Query: 1399 ttccacgacttcaccgacgtgatcgtgccgctcttcaccacggccagccagttcaacggc 1458 ||||| ||||||||||||||| | || || || ||||| || || ||| | ||||| ||| Sbjct: 143313 ttccatgacttcaccgacgtgcttgtccctcttttcacaaccgcaagcgaattcaatggc 143372 Query: 1459 gaggtccagttcctcatcacggacatggc 1487 || || || ||||| ||||| |||||||| Sbjct: 143373 gaagttcaattcctaatcacagacatggc 143401
>dbj|AK103888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150D01, full insert sequence Length = 2163 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1533 caagtaccccttgatcgacttcagcaaggacgatcaggtgcactgcttcaagca 1586 ||||||||||||||| ||||||| ||| |||||||| ||||| ||||||||||| Sbjct: 1187 caagtaccccttgattgacttcaacaatgacgatcaagtgcattgcttcaagca 1240 Score = 42.1 bits (21), Expect = 8.0 Identities = 72/89 (80%) Strand = Plus / Plus Query: 1399 ttccacgacttcaccgacgtgatcgtgccgctcttcaccacggccagccagttcaacggc 1458 ||||| ||||||||||||||| | || || || ||||| || || ||| | ||||| ||| Sbjct: 1053 ttccatgacttcaccgacgtgcttgtccctcttttcacaaccgcaagcgaattcaatggc 1112 Query: 1459 gaggtccagttcctcatcacggacatggc 1487 || || || ||||| ||||| |||||||| Sbjct: 1113 gaagttcaattcctaatcacagacatggc 1141
>dbj|AK103452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129I11, full insert sequence Length = 3831 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 681 agttgtcaccaatcctcgtattctagtattattcaaaatgtcaagcaaaactatatgcct 740 |||| |||||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 1888 agttttcaccagtcctcatattctagtattatccaaaatgtgaagcaaaattatatccct 1947 Query: 741 cc 742 || Sbjct: 1948 cc 1949 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Plus Query: 311 cccgcatcccgaactacccgagcatgtcgtcccagctgctgtgccaagttcacaacatca 370 ||||||| ||||||||||| | | || | || ||| ||||||| |||||||||||||||| Sbjct: 776 cccgcattccgaactacccaaacctgccatctcagttgctgtgtcaagttcacaacatca 835 Query: 371 ccatgcatg 379 || |||||| Sbjct: 836 ccttgcatg 844 Score = 52.0 bits (26), Expect = 0.008 Identities = 50/58 (86%) Strand = Plus / Plus Query: 481 gccgacaaggacaccgatgagatgtatgcacagatgactcttcaaccagcgaactctg 538 |||||||||||||| ||||| | |||||||||||||| ||||| |||| ||||||| Sbjct: 844 gccgacaaggacactgatgaagtttatgcacagatgacccttcagccagtaaactctg 901
>dbj|AK103105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118O21, full insert sequence Length = 2602 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 681 agttgtcaccaatcctcgtattctagtattattcaaaatgtcaagcaaaactatatgcct 740 |||| |||||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 1741 agttttcaccagtcctcatattctagtattatccaaaatgtgaagcaaaattatatccct 1800 Query: 741 cc 742 || Sbjct: 1801 cc 1802 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Plus Query: 311 cccgcatcccgaactacccgagcatgtcgtcccagctgctgtgccaagttcacaacatca 370 ||||||| ||||||||||| | | || | || ||| ||||||| |||||||||||||||| Sbjct: 629 cccgcattccgaactacccaaacctgccatctcagttgctgtgtcaagttcacaacatca 688 Query: 371 ccatgcatg 379 || |||||| Sbjct: 689 ccttgcatg 697 Score = 52.0 bits (26), Expect = 0.008 Identities = 50/58 (86%) Strand = Plus / Plus Query: 481 gccgacaaggacaccgatgagatgtatgcacagatgactcttcaaccagcgaactctg 538 |||||||||||||| ||||| | |||||||||||||| ||||| |||| ||||||| Sbjct: 697 gccgacaaggacactgatgaagtttatgcacagatgacccttcagccagtaaactctg 754
>dbj|AB071292.1| Oryza sativa OsMP mRNA for Arabidopsis Monopteros-like protein, complete cds Length = 2868 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 681 agttgtcaccaatcctcgtattctagtattattcaaaatgtcaagcaaaactatatgcct 740 |||| |||||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 1348 agttttcaccagtcctcatattctagtattatccaaaatgtgaagcaaaattatatccct 1407 Query: 741 cc 742 || Sbjct: 1408 cc 1409 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Plus Query: 311 cccgcatcccgaactacccgagcatgtcgtcccagctgctgtgccaagttcacaacatca 370 ||||||| ||||||||||| | | || | || ||| ||||||| |||||||||||||||| Sbjct: 236 cccgcattccgaactacccaaacctgccatctcagttgctgtgtcaagttcacaacatca 295 Query: 371 ccatgcatg 379 || |||||| Sbjct: 296 ccttgcatg 304 Score = 52.0 bits (26), Expect = 0.008 Identities = 50/58 (86%) Strand = Plus / Plus Query: 481 gccgacaaggacaccgatgagatgtatgcacagatgactcttcaaccagcgaactctg 538 |||||||||||||| ||||| | |||||||||||||| ||||| |||| ||||||| Sbjct: 304 gccgacaaggacactgatgaagtttatgcacagatgacccttcagccagtaaactctg 361
>gb|AF525024.1| Hordeum vulgare subsp. vulgare HGA6 (HGA6) gene, complete cds Length = 2692 Score = 58.0 bits (29), Expect = 1e-04 Identities = 89/109 (81%) Strand = Plus / Plus Query: 1333 gagtgcaccaggtaccacgacgtgcccgtggtgatcttctcgctcaccggttacacgggg 1392 |||||||||||| |||| |||||| | ||||| |||||| || ||| |||||||| Sbjct: 1778 gagtgcaccaggacgcacggcgtgccggcggtgacgttctcgatcggcgggtacacgggc 1837 Query: 1393 aacctcttccacgacttcaccgacgtgatcgtgccgctcttcaccacgg 1441 ||| |||||||||||||| | |||||| |||| ||||||| || ||||| Sbjct: 1838 aacatcttccacgacttctctgacgtgctcgtcccgctctacaacacgg 1886
>ref|NM_001058753.1| Oryza sativa (japonica cultivar-group) Os04g0196600 (Os04g0196600) mRNA, complete cds Length = 1765 Score = 52.0 bits (26), Expect = 0.008 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1402 cacgacttcaccgacgtgatcgtgccgctcttca 1435 |||||||||||||||||| |||| |||||||||| Sbjct: 820 cacgacttcaccgacgtgctcgtcccgctcttca 853
>emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026E15, complete sequence Length = 137874 Score = 52.0 bits (26), Expect = 0.008 Identities = 32/34 (94%) Strand = Plus / Minus Query: 1402 cacgacttcaccgacgtgatcgtgccgctcttca 1435 |||||||||||||||||| |||| |||||||||| Sbjct: 113234 cacgacttcaccgacgtgctcgtcccgctcttca 113201
>dbj|AK121999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110G11, full insert sequence Length = 1768 Score = 52.0 bits (26), Expect = 0.008 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1402 cacgacttcaccgacgtgatcgtgccgctcttca 1435 |||||||||||||||||| |||| |||||||||| Sbjct: 821 cacgacttcaccgacgtgctcgtcccgctcttca 854
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 50.1 bits (25), Expect = 0.033 Identities = 25/25 (100%) Strand = Plus / Minus Query: 505 tatgcacagatgactcttcaaccag 529 ||||||||||||||||||||||||| Sbjct: 127522 tatgcacagatgactcttcaaccag 127498
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Plus Query: 252 accaacaaaagaaacaaaattaa 274 ||||||||||||||||||||||| Sbjct: 13714607 accaacaaaagaaacaaaattaa 13714629
>ref|XM_392473.3| PREDICTED: Apis mellifera similar to jumonji domain containing 1B (LOC408944), mRNA Length = 5738 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1439 cggccagccagttcaacggcgag 1461 ||||||||||||||||||||||| Sbjct: 4065 cggccagccagttcaacggcgag 4043
>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds Length = 4954 Score = 46.1 bits (23), Expect = 0.51 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1819 gagctttattaattcaggtgctatttgaaac 1849 |||||| ||||||||||||||| |||||||| Sbjct: 1803 gagcttaattaattcaggtgctttttgaaac 1773
>gb|AC127411.3| Mus musculus BAC clone RP23-60E24 from chromosome 5, complete sequence Length = 217636 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Minus Query: 902 tgttgcaggaagagagccaagaa 924 ||||||||||||||||||||||| Sbjct: 172434 tgttgcaggaagagagccaagaa 172412
>emb|AL928834.15| Zebrafish DNA sequence from clone CH211-51E12 in linkage group 4 Contains the gene for a novel protein (zgc:56546), the gene for a novel protein similar to the Tctex-1 family, the gene for a novel protein similar to vertebrate tubby like protein 4 (TULP4), the gene for a novel protein similar to vertebrate mitochondrial ribosomal protein S10 (MRPS10), the 3' end of a novel gene, two novel genes and three CpG islands, complete sequence Length = 189764 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1129 tatacacgcacgcacgcatcaaa 1151 ||||||||||||||||||||||| Sbjct: 136140 tatacacgcacgcacgcatcaaa 136162
>gb|AC011069.7|AC011069 Drosophila melanogaster, chromosome X, region 12B-12C, BAC clone BACR11H20, complete sequence Length = 168384 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Plus Query: 252 accaacaaaagaaacaaaattaa 274 ||||||||||||||||||||||| Sbjct: 150828 accaacaaaagaaacaaaattaa 150850
>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b) pseudogene, partial sequence Length = 4018 Score = 46.1 bits (23), Expect = 0.51 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1819 gagctttattaattcaggtgctatttgaaac 1849 |||||| ||||||||||||||| |||||||| Sbjct: 1850 gagcttaattaattcaggtgctttttgaaac 1820
>emb|CT834727.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA227D19, full insert sequence Length = 2237 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1386 cacggggaacctcttccacgacttcaccgacgtg 1419 ||||||||||| |||||||||| |||||||||| Sbjct: 1132 cacggggaacccgttccacgactacaccgacgtg 1165
>ref|NM_001071465.1| Oryza sativa (japonica cultivar-group) Os10g0492200 (Os10g0492200) mRNA, complete cds Length = 1995 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1386 cacggggaacctcttccacgacttcaccgacgtg 1419 ||||||||||| |||||||||| |||||||||| Sbjct: 745 cacggggaacccgttccacgactacaccgacgtg 778
>ref|NM_001065060.1| Oryza sativa (japonica cultivar-group) Os06g0707200 (Os06g0707200) mRNA, complete cds Length = 1695 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1405 gacttcaccgacgtgatcgtgccgctcttcacca 1438 |||| |||||||||| |||| ||||||||||||| Sbjct: 603 gactacaccgacgtgctcgtcccgctcttcacca 636
>gb|AE014852.2| Plasmodium falciparum 3D7 chromosome 12, section 9 of 9 of the complete sequence Length = 260929 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 255 aacaaaagaaacaaaattaatt 276 |||||||||||||||||||||| Sbjct: 184800 aacaaaagaaacaaaattaatt 184821
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1386 cacggggaacctcttccacgacttcaccgacgtg 1419 ||||||||||| |||||||||| |||||||||| Sbjct: 44078 cacggggaacccgttccacgactacaccgacgtg 44111
>gb|AE005701.1| Caulobacter crescentus CB15 section 27 of 359 of the complete genome Length = 13187 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1404 cgacttcaccgacgtgatcgtg 1425 |||||||||||||||||||||| Sbjct: 3316 cgacttcaccgacgtgatcgtg 3337
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1386 cacggggaacctcttccacgacttcaccgacgtg 1419 ||||||||||| |||||||||| |||||||||| Sbjct: 18169050 cacggggaacccgttccacgactacaccgacgtg 18169017
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1405 gacttcaccgacgtgatcgtgccgctcttcacca 1438 |||| |||||||||| |||| ||||||||||||| Sbjct: 29369669 gactacaccgacgtgctcgtcccgctcttcacca 29369636
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 354 ccaagttcacaacatcaccatg 375 |||||||||||||||||||||| Sbjct: 613475 ccaagttcacaacatcaccatg 613454
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1405 gacttcaccgacgtgatcgtgccgctcttcacca 1438 |||| |||||||||| |||| ||||||||||||| Sbjct: 80550 gactacaccgacgtgctcgtcccgctcttcacca 80517
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1405 gacttcaccgacgtgatcgtgccgctcttcacca 1438 |||| |||||||||| |||| ||||||||||||| Sbjct: 132467 gactacaccgacgtgctcgtcccgctcttcacca 132434
>dbj|AK109476.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C03, full insert sequence Length = 2019 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1386 cacggggaacctcttccacgacttcaccgacgtg 1419 ||||||||||| |||||||||| |||||||||| Sbjct: 769 cacggggaacccgttccacgactacaccgacgtg 802
>dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07, map 22, complete sequences Length = 180152 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 785 catgccttccagtgcagccaag 806 |||||||||||||||||||||| Sbjct: 94516 catgccttccagtgcagccaag 94537
>dbj|AK071568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103D13, full insert sequence Length = 1696 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1405 gacttcaccgacgtgatcgtgccgctcttcacca 1438 |||| |||||||||| |||| ||||||||||||| Sbjct: 604 gactacaccgacgtgctcgtcccgctcttcacca 637
>dbj|AK059411.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C09, full insert sequence Length = 1619 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1405 gacttcaccgacgtgatcgtgccgctcttcacca 1438 |||| |||||||||| |||| ||||||||||||| Sbjct: 613 gactacaccgacgtgctcgtcccgctcttcacca 646
>dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, section 20/105 Length = 340000 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 785 catgccttccagtgcagccaag 806 |||||||||||||||||||||| Sbjct: 151599 catgccttccagtgcagccaag 151620
>dbj|AP001021.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-793A3, complete sequence Length = 222596 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 566 agcttggtgaagaaattcagaa 587 |||||||||||||||||||||| Sbjct: 121045 agcttggtgaagaaattcagaa 121066
>dbj|AP000401.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone:21B24P16, complete sequence Length = 43516 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 785 catgccttccagtgcagccaag 806 |||||||||||||||||||||| Sbjct: 35774 catgccttccagtgcagccaag 35795
>emb|CR759961.20| Rat DNA sequence from clone RP32-320L10, complete sequence Length = 144666 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 caacaaaagaaacaaaattaa 274 ||||||||||||||||||||| Sbjct: 121507 caacaaaagaaacaaaattaa 121527
>emb|AM180088.1| Haloquadratum walsbyi DSM 16790 complete genome Length = 3132494 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1487 cgctctggtggaccatcaagt 1507 ||||||||||||||||||||| Sbjct: 253064 cgctctggtggaccatcaagt 253084
>gb|AC169083.1| Mus musculus chromosome 3, clone RP23-28D7, complete sequence Length = 215143 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 aacaaaagaaacaaaattaat 275 ||||||||||||||||||||| Sbjct: 188706 aacaaaagaaacaaaattaat 188686
>gb|AC165280.3| Mus musculus chromosome 3, clone RP23-389C4, complete sequence Length = 201348 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 aacaaaagaaacaaaattaat 275 ||||||||||||||||||||| Sbjct: 134095 aacaaaagaaacaaaattaat 134075
>gb|AY809237.1| Schistosoma japonicum SJCHGC09003 protein mRNA, partial cds Length = 602 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1020 aaaactatttcagagaattctgaac 1044 |||||||||| |||||||||||||| Sbjct: 330 aaaactattttagagaattctgaac 354
>gb|AC147498.14| Medicago truncatula clone mth2-6f18, complete sequence Length = 135726 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 aaaagaaacaaaattaattca 278 ||||||||||||||||||||| Sbjct: 15440 aaaagaaacaaaattaattca 15460
>emb|Z68336.1|CEF22B3 Caenorhabditis elegans Cosmid F22B3, complete sequence Length = 30480 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 caacaaaagaaacaaaattaa 274 ||||||||||||||||||||| Sbjct: 23043 caacaaaagaaacaaaattaa 23023
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 aagaaacaaaattaattcagg 280 ||||||||||||||||||||| Sbjct: 3673621 aagaaacaaaattaattcagg 3673601
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 cccatgcagatgcagctagcc 53 ||||||||||||||||||||| Sbjct: 22470468 cccatgcagatgcagctagcc 22470448
>emb|AL391704.8| Human DNA sequence from clone RP11-94M14 on chromosome 10 Contains the 5' end of a novel gene and two novel genes, complete sequence Length = 180552 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1953 taaaactgcacaagagaaaca 1973 ||||||||||||||||||||| Sbjct: 25625 taaaactgcacaagagaaaca 25645
>emb|AL034343.17|HS108C2 Human DNA sequence from clone RP1-108C2 on chromosome 6p12.1-21.1 Contains the MCM3 gene for MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), a CACT (carnitine/acylcarnitine translocase) pseudogene, the IL17F gene for interleukin 17F (ML1 ML-1) and a CpG island, complete sequence Length = 130904 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 559 gcaatggagcttggtgaagaaattcagaa 587 ||||||||||||||||| ||||| ||||| Sbjct: 117219 gcaatggagcttggtgatgaaatgcagaa 117191
>gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome 12, complete sequence Length = 202807 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 668 caggactccactgagttgtca 688 ||||||||||||||||||||| Sbjct: 143093 caggactccactgagttgtca 143113
>emb|BX545847.9| Zebrafish DNA sequence from clone RP71-14M1 in linkage group 19, complete sequence Length = 128770 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 aagaaacaaaattaattcagg 280 ||||||||||||||||||||| Sbjct: 111471 aagaaacaaaattaattcagg 111491
>gb|AC121099.8| Mus musculus chromosome 3, clone RP24-501F21, complete sequence Length = 157318 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 aacaaaagaaacaaaattaat 275 ||||||||||||||||||||| Sbjct: 154760 aacaaaagaaacaaaattaat 154780
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 cccatgcagatgcagctagcc 53 ||||||||||||||||||||| Sbjct: 131535 cccatgcagatgcagctagcc 131515
>gb|AC019196.10| Homo sapiens BAC clone RP11-356G6 from 2, complete sequence Length = 175504 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1165 ttcaagactgatctctgcttt 1185 ||||||||||||||||||||| Sbjct: 127304 ttcaagactgatctctgcttt 127284
>dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1720_F04 Length = 105227 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 cccatgcagatgcagctagcc 53 ||||||||||||||||||||| Sbjct: 13956 cccatgcagatgcagctagcc 13936
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2001 gcaagttttaaaatcaaccca 2021 ||||||||||||||||||||| Sbjct: 7724 gcaagttttaaaatcaaccca 7704
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 aagaaacaaaattaattcagg 280 ||||||||||||||||||||| Sbjct: 81882 aagaaacaaaattaattcagg 81862
>emb|AL606481.8| Zebrafish DNA sequence from clone BUSM1-99M4 Contains a novel gene for a protein with an immunoglobulin domain, complete sequence Length = 104752 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 caacaaaagaaacaaaattaa 274 ||||||||||||||||||||| Sbjct: 92355 caacaaaagaaacaaaattaa 92335
>emb|AL606654.3|OSJN00100 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0028M18, complete sequence Length = 132854 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 710 tattcaaaatgtcaagcaaaa 730 ||||||||||||||||||||| Sbjct: 46192 tattcaaaatgtcaagcaaaa 46172
>emb|CR759894.19| Zebrafish DNA sequence from clone DKEYP-84G6 in linkage group 10, complete sequence Length = 188280 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 caacaaaagaaacaaaattaa 274 ||||||||||||||||||||| Sbjct: 176398 caacaaaagaaacaaaattaa 176418 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 363,539,104 Number of extensions: 20084375 Number of successful extensions: 110874 Number of sequences better than 10.0: 87 Number of HSP's gapped: 110871 Number of HSP's successfully gapped: 124 Length of query: 2098 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2075 Effective length of database: 18,503,978,556 Effective search space: 38395755503700 Effective search space used: 38395755503700 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
