ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf111h08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001050483.1| Oryza sativa (japonica cultivar-group) Os01g0693900 (Os01g0693900) mRNA, complete cds Length = 1247 Score = 708 bits (357), Expect = 0.0 Identities = 546/609 (89%) Strand = Plus / Plus Query: 213 gacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatgtac 272 ||||||||||||| |||||||||| ||||||| ||||| |||||||||||||| ||||| Sbjct: 196 gacggcggcgcgctgaagccgtggttgttcgtcgggctcgggaaccccgggaaagtgtac 255 Query: 273 cagaggactcgccacaacgttggattcgagatgattgatgctatagcagaagcagagggt 332 || |||||||||||||||||||||||||||||||||||| |||||||||||| || ||| Sbjct: 256 caagggactcgccacaacgttggattcgagatgattgatgttatagcagaagctgaaggt 315 Query: 333 gtatcactcagcggtatgcagttcaaggcaatggttggcaaaggtcgtattggagatgtt 392 |||| |||||| |||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 316 atatccctcagcagtatgcagttcaaggcaatggtaggaaaaggtcgtattggagatgcc 375 Query: 393 cctatcatgcttgccaagccgcaaacgtttatgaatgcaagcggtgagtctgttgggcag 452 ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 376 cctatcatgctggccaagccacaaacttttatgaatgcaagtggtgagtctgtggggcag 435 Query: 453 ctggtttcatatttcaagataccacttaatcaagttgttgtgatgtacgatgatctggat 512 |||| |||||||||||||||||||||||||||||| |||||||||| |||||||| || Sbjct: 436 ttggtctcatatttcaagataccacttaatcaagttcttgtgatgtatgatgatctagac 495 Query: 513 ttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcgggcataatgggatg 572 || ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||| || Sbjct: 496 ttgccctttgcaaaattgcgtctactgccgaaaggtggacatggcggtcataatggggtg 555 Query: 573 agaagcattatcaaccatctcaaacaaaatcgtgattttccacgtctaagaattggcatt 632 |||||||||||||||||| | || || || |||||||| ||||||||||||||||||||| Sbjct: 556 agaagcattatcaaccatttgaagcagaaccgtgatttcccacgtctaagaattggcatt 615 Query: 633 ggacgaccacctgggaagatggatcctgccaactttgttctcaggccattcaccaaaaaa 692 |||||||||||||||||||||||||||||||| ||||||||| | ||||| | || |||| Sbjct: 616 ggacgaccacctgggaagatggatcctgccaattttgttctccgaccatttaacagaaaa 675 Query: 693 gaacaagaagagcttgatttcacattccataggggcttggatgcaataagaataatgaca 752 ||||| ||||||||||||||| | ||||||||||||||||| ||| | ||||||||| || Sbjct: 676 gaacaggaagagcttgatttcgctttccataggggcttggaggcagttagaataatggca 735 Query: 753 cttgaaggattcaacaagagcgctactttcgtgaacaccgcccaatcatccgaaatgctg 812 ||||| ||||||||||||||||| |||| ||||||||||| || || || |||||| || Sbjct: 736 cttgagggattcaacaagagcgcaacttatgtgaacaccgcacagtcctctgaaatgttg 795 Query: 813 aatagatga 821 ||||||||| Sbjct: 796 aatagatga 804 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 67 cggcgatgcagctgctctccggcgcctcggcctcccgcttcccctcgcccctcc 120 ||||||||| |||||||||||||||||| || ||||| |||||| ||||||| Sbjct: 47 cggcgatgcggctgctctccggcgcctctgcttcccgaatcccctgccccctcc 100
>dbj|AK099894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113G18, full insert sequence Length = 1249 Score = 708 bits (357), Expect = 0.0 Identities = 546/609 (89%) Strand = Plus / Plus Query: 213 gacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatgtac 272 ||||||||||||| |||||||||| ||||||| ||||| |||||||||||||| ||||| Sbjct: 198 gacggcggcgcgctgaagccgtggttgttcgtcgggctcgggaaccccgggaaagtgtac 257 Query: 273 cagaggactcgccacaacgttggattcgagatgattgatgctatagcagaagcagagggt 332 || |||||||||||||||||||||||||||||||||||| |||||||||||| || ||| Sbjct: 258 caagggactcgccacaacgttggattcgagatgattgatgttatagcagaagctgaaggt 317 Query: 333 gtatcactcagcggtatgcagttcaaggcaatggttggcaaaggtcgtattggagatgtt 392 |||| |||||| |||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 318 atatccctcagcagtatgcagttcaaggcaatggtaggaaaaggtcgtattggagatgcc 377 Query: 393 cctatcatgcttgccaagccgcaaacgtttatgaatgcaagcggtgagtctgttgggcag 452 ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 378 cctatcatgctggccaagccacaaacttttatgaatgcaagtggtgagtctgtggggcag 437 Query: 453 ctggtttcatatttcaagataccacttaatcaagttgttgtgatgtacgatgatctggat 512 |||| |||||||||||||||||||||||||||||| |||||||||| |||||||| || Sbjct: 438 ttggtctcatatttcaagataccacttaatcaagttcttgtgatgtatgatgatctagac 497 Query: 513 ttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcgggcataatgggatg 572 || ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||| || Sbjct: 498 ttgccctttgcaaaattgcgtctactgccgaaaggtggacatggcggtcataatggggtg 557 Query: 573 agaagcattatcaaccatctcaaacaaaatcgtgattttccacgtctaagaattggcatt 632 |||||||||||||||||| | || || || |||||||| ||||||||||||||||||||| Sbjct: 558 agaagcattatcaaccatttgaagcagaaccgtgatttcccacgtctaagaattggcatt 617 Query: 633 ggacgaccacctgggaagatggatcctgccaactttgttctcaggccattcaccaaaaaa 692 |||||||||||||||||||||||||||||||| ||||||||| | ||||| | || |||| Sbjct: 618 ggacgaccacctgggaagatggatcctgccaattttgttctccgaccatttaacagaaaa 677 Query: 693 gaacaagaagagcttgatttcacattccataggggcttggatgcaataagaataatgaca 752 ||||| ||||||||||||||| | ||||||||||||||||| ||| | ||||||||| || Sbjct: 678 gaacaggaagagcttgatttcgctttccataggggcttggaggcagttagaataatggca 737 Query: 753 cttgaaggattcaacaagagcgctactttcgtgaacaccgcccaatcatccgaaatgctg 812 ||||| ||||||||||||||||| |||| ||||||||||| || || || |||||| || Sbjct: 738 cttgagggattcaacaagagcgcaacttatgtgaacaccgcacagtcctctgaaatgttg 797 Query: 813 aatagatga 821 ||||||||| Sbjct: 798 aatagatga 806 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 67 cggcgatgcagctgctctccggcgcctcggcctcccgcttcccctcgcccctcc 120 ||||||||| |||||||||||||||||| || ||||| |||||| ||||||| Sbjct: 49 cggcgatgcggctgctctccggcgcctctgcttcccgaatcccctgccccctcc 102
>dbj|AK066034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047M19, full insert sequence Length = 1211 Score = 692 bits (349), Expect = 0.0 Identities = 544/609 (89%) Strand = Plus / Plus Query: 213 gacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatgtac 272 ||||||||||||| |||||||||| ||||||| ||||| |||||||||||||| ||||| Sbjct: 222 gacggcggcgcgctgaagccgtggttgttcgtcgggctcgggaaccccgggaaagtgtac 281 Query: 273 cagaggactcgccacaacgttggattcgagatgattgatgctatagcagaagcagagggt 332 || |||||| ||||||||||||||||||||||||||||| |||||||||||| || ||| Sbjct: 282 caagggactctccacaacgttggattcgagatgattgatgttatagcagaagctgaaggt 341 Query: 333 gtatcactcagcggtatgcagttcaaggcaatggttggcaaaggtcgtattggagatgtt 392 |||| |||||| |||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 342 atatccctcagcagtatgcagttcaaggcaatggtaggaaaaggtcgtattggagatgcc 401 Query: 393 cctatcatgcttgccaagccgcaaacgtttatgaatgcaagcggtgagtctgttgggcag 452 ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 402 cctatcatgctggccaagccacaaacttttatgaatgcaagtggtgagtctgtggggcag 461 Query: 453 ctggtttcatatttcaagataccacttaatcaagttgttgtgatgtacgatgatctggat 512 |||| |||||||||||||||||||||||||||||| |||||||||| |||||||| || Sbjct: 462 ttggtctcatatttcaagataccacttaatcaagttcttgtgatgtatgatgatctagac 521 Query: 513 ttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcgggcataatgggatg 572 || ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||| || Sbjct: 522 ttgccctttgcaaaattgcgtctactgccgaaaggtggacatggcggtcataatggggtg 581 Query: 573 agaagcattatcaaccatctcaaacaaaatcgtgattttccacgtctaagaattggcatt 632 |||||||||||||||||| | || || || |||||||| ||||||||||||||||||||| Sbjct: 582 agaagcattatcaaccatttgaagcagaaccgtgatttcccacgtctaagaattggcatt 641 Query: 633 ggacgaccacctgggaagatggatcctgccaactttgttctcaggccattcaccaaaaaa 692 |||||||||||||||||||||||||||||||| ||||||||| | ||||| | || |||| Sbjct: 642 ggacgaccacctgggaagatggatcctgccaattttgttctccgaccatttaacagaaaa 701 Query: 693 gaacaagaagagcttgatttcacattccataggggcttggatgcaataagaataatgaca 752 ||||| ||||||||||||||| | ||||||||||||||||| ||| | ||||||||| || Sbjct: 702 gaacaggaagagcttgatttcgctttccataggggcttggaggcagttagaataatggca 761 Query: 753 cttgaaggattcaacaagagcgctactttcgtgaacaccgcccaatcatccgaaatgctg 812 |||| ||||||||||||||||| |||| ||||||||||| || || || |||||| || Sbjct: 762 cttgtgggattcaacaagagcgcaacttatgtgaacaccgcacagtcctctgaaatgttg 821 Query: 813 aatagatga 821 ||||||||| Sbjct: 822 aatagatga 830 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 67 cggcgatgcagctgctctccggcgcctcggcctcccgcttcccctcgcccctcc 120 ||||||||| |||||||||||||||||| || ||||| |||||| ||||||| Sbjct: 73 cggcgatgcggctgctctccggcgcctctgcttcccgaatcccctgccccctcc 126
>ref|NM_001062770.1| Oryza sativa (japonica cultivar-group) Os05g0549600 (Os05g0549600) mRNA, complete cds Length = 1059 Score = 299 bits (151), Expect = 1e-77 Identities = 460/564 (81%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 227 gaagccgtggctgttcgttgggctagggaaccccgggaagatgtaccagaggactcgcca 286 ||||||||||||| || | ||||| ||||||||||| | ||||||| || ||||||| || Sbjct: 210 gaagccgtggctgctcatcgggctcgggaaccccggcaggatgtacaaggggactcgtca 269 Query: 287 caacgttggattcgagatgattgatgctatagcagaagcagagggtgtatcactcagcgg 346 |||||||||||| |||||||| |||||||| |||||||| |||||| | || | ||| | Sbjct: 270 caacgttggatttgagatgatcgatgctattgcagaagctgagggtatttctgttagcag 329 Query: 347 tatgcagttcaaggcaatggttggcaaaggtcgtattggagatgttcctatcatgcttgc 406 | ||| |||||| |||||||||| ||||| | |||||| ||||| || | |||||||| Sbjct: 330 caagcaattcaagtcaatggttggtaaaggccttattggtgatgtcccagtaatgcttgc 389 Query: 407 caagccgcaaacgtttatgaatgcaagcggtgagtctgttgggcagctggtttcatattt 466 |||||| || || | ||||||||||| ||| || ||||||||||||||||| Sbjct: 390 caagccacagacttacatgaatgcaagtggt--------tgcacagctggtttcatattt 441 Query: 467 caagataccacttaatcaagttgttgtgatgtacgatgatctggatttacccttcgcgaa 526 ||||||||||| | ||||||| ||||||| || |||||||| || ||||||| || || Sbjct: 442 taagataccactcagtcaagttcttgtgatctatgatgatctagacataccctttgcaaa 501 Query: 527 attgcgtctactgccaaaaggtggacatggcgggcataatgggatgagaagcattatcaa 586 |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 502 attgcgcttactgcctaaaggaggacatggcgggcataatgggatgagaagcattattaa 561 Query: 587 ccatctcaaacaaaatcgtgattttccacgtctaagaattggcattggacgaccacctgg 646 |||| | ||||| | |||||||| ||||| || || ||||| ||||| || || |||| Sbjct: 562 ccatttgaaacagagccgtgatttcccacgccttaggattggtattgggcgccccactgg 621 Query: 647 gaagatggatcctgccaactttgttctcaggccattcaccaaaaaagaacaagaagagct 706 |||| ||||| || | ||||||||| ||| |||||||||| |||||||||||||||| Sbjct: 622 gaagttggatgctatcggctttgttctaaggtcattcaccaaggaagaacaagaagagct 681 Query: 707 tgatttcacattccataggggcttggatgcaataagaataatgacacttgaaggattcaa 766 | |||| || || ||||| ||||| | ||| |||| |||||| ||| ||||||||||| Sbjct: 682 taatttgacgatcaataggagcttgcaagcagtaaggataatgctactcgaaggattcaa 741 Query: 767 caagagcgctactttcgtgaacac 790 |||| | || ||||| |||||||| Sbjct: 742 caagggtgcaacttttgtgaacac 765
>dbj|AK061016.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B10, full insert sequence Length = 1074 Score = 299 bits (151), Expect = 1e-77 Identities = 460/564 (81%), Gaps = 8/564 (1%) Strand = Plus / Plus Query: 227 gaagccgtggctgttcgttgggctagggaaccccgggaagatgtaccagaggactcgcca 286 ||||||||||||| || | ||||| ||||||||||| | ||||||| || ||||||| || Sbjct: 210 gaagccgtggctgctcatcgggctcgggaaccccggcaggatgtacaaggggactcgtca 269 Query: 287 caacgttggattcgagatgattgatgctatagcagaagcagagggtgtatcactcagcgg 346 |||||||||||| |||||||| |||||||| |||||||| |||||| | || | ||| | Sbjct: 270 caacgttggatttgagatgatcgatgctattgcagaagctgagggtatttctgttagcag 329 Query: 347 tatgcagttcaaggcaatggttggcaaaggtcgtattggagatgttcctatcatgcttgc 406 | ||| |||||| |||||||||| ||||| | |||||| ||||| || | |||||||| Sbjct: 330 caagcaattcaagtcaatggttggtaaaggccttattggtgatgtcccagtaatgcttgc 389 Query: 407 caagccgcaaacgtttatgaatgcaagcggtgagtctgttgggcagctggtttcatattt 466 |||||| || || | ||||||||||| ||| || ||||||||||||||||| Sbjct: 390 caagccacagacttacatgaatgcaagtggt--------tgcacagctggtttcatattt 441 Query: 467 caagataccacttaatcaagttgttgtgatgtacgatgatctggatttacccttcgcgaa 526 ||||||||||| | ||||||| ||||||| || |||||||| || ||||||| || || Sbjct: 442 taagataccactcagtcaagttcttgtgatctatgatgatctagacataccctttgcaaa 501 Query: 527 attgcgtctactgccaaaaggtggacatggcgggcataatgggatgagaagcattatcaa 586 |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 502 attgcgcttactgcctaaaggaggacatggcgggcataatgggatgagaagcattattaa 561 Query: 587 ccatctcaaacaaaatcgtgattttccacgtctaagaattggcattggacgaccacctgg 646 |||| | ||||| | |||||||| ||||| || || ||||| ||||| || || |||| Sbjct: 562 ccatttgaaacagagccgtgatttcccacgccttaggattggtattgggcgccccactgg 621 Query: 647 gaagatggatcctgccaactttgttctcaggccattcaccaaaaaagaacaagaagagct 706 |||| ||||| || | ||||||||| ||| |||||||||| |||||||||||||||| Sbjct: 622 gaagttggatgctatcggctttgttctaaggtcattcaccaaggaagaacaagaagagct 681 Query: 707 tgatttcacattccataggggcttggatgcaataagaataatgacacttgaaggattcaa 766 | |||| || || ||||| ||||| | ||| |||| |||||| ||| ||||||||||| Sbjct: 682 taatttgacgatcaataggagcttgcaagcagtaaggataatgctactcgaaggattcaa 741 Query: 767 caagagcgctactttcgtgaacac 790 |||| | || ||||| |||||||| Sbjct: 742 caagggtgcaacttttgtgaacac 765
>gb|AY110197.1| Zea mays CL41614_1 mRNA sequence Length = 531 Score = 268 bits (135), Expect = 4e-68 Identities = 203/226 (89%) Strand = Plus / Minus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtgatgtacgatgatctggatt 513 ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| Sbjct: 531 tggtttcatatttcaagataccacttantcaagtcgttgtgatgtatgatgatctggatt 472 Query: 514 tacccttcgcgaaattgcgtctactgccaaaaggtggacatggcgggcataatgggatga 573 ||||||| || ||| ||||||| |||||||| ||||| ||||| |||||||||||||||| Sbjct: 471 taccctttgcaaaactgcgtctgctgccaaagggtggccatggtgggcataatgggatga 412 Query: 574 gaagcattatcaaccatctcaaacaaaatcgtgattttccacgtctaagaattggcattg 633 ||||||| |||||||| | ||||| | |||||||||||||| |||||||||||||||| Sbjct: 411 gaagcatcgtcaaccatttgaaacagagccgtgattttccacgcctaagaattggcattg 352 Query: 634 gacgaccacctgggaagatggatcctgccaactttgttctcaggcc 679 ||||||| || |||||||||||||||||||| || |||||| |||| Sbjct: 351 gacgaccgcccgggaagatggatcctgccaatttcgttctccggcc 306 Score = 91.7 bits (46), Expect = 5e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 756 gaaggattcaacaagagcgctactttcgtgaacaccgcccaatcatccgaaatgctgaat 815 |||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||| Sbjct: 229 gaaggattcaacaagagcgcgacttacgtgaacactgcccaatcatctgaaatgctgaat 170 Query: 816 ag 817 || Sbjct: 169 ag 168
>emb|CT831254.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI210K15, full insert sequence Length = 2299 Score = 200 bits (101), Expect = 7e-48 Identities = 149/165 (90%) Strand = Plus / Plus Query: 213 gacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatgtac 272 ||||||||||||| |||||||||| ||||||| ||||| |||||||||||||| ||||| Sbjct: 196 gacggcggcgcgctgaagccgtggttgttcgtcgggctcgggaaccccgggaaagtgtac 255 Query: 273 cagaggactcgccacaacgttggattcgagatgattgatgctatagcagaagcagagggt 332 || |||||||||||||||||||||||||||||||||||| |||||||||||| || ||| Sbjct: 256 caagggactcgccacaacgttggattcgagatgattgatgttatagcagaagctgaaggt 315 Query: 333 gtatcactcagcggtatgcagttcaaggcaatggttggcaaaggt 377 |||| |||||| |||||||||||||||||||||| || |||||| Sbjct: 316 atatccctcagcagtatgcagttcaaggcaatggtaggaaaaggt 360 Score = 157 bits (79), Expect = 1e-34 Identities = 112/123 (91%) Strand = Plus / Plus Query: 447 gggcagctggtttcatatttcaagataccacttaatcaagttgttgtgatgtacgatgat 506 |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 799 gggcagttggtctcatatttcaagataccacttaatcaagttcttgtgatgtatgatgat 858 Query: 507 ctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcgggcataat 566 || || || ||||| || ||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 859 ctagacttgccctttgcaaaattgcgtctactgccgaaaggtggacatggcggtcataat 918 Query: 567 ggg 569 ||| Sbjct: 919 ggg 921 Score = 117 bits (59), Expect = 8e-23 Identities = 104/119 (87%) Strand = Plus / Plus Query: 703 agcttgatttcacattccataggggcttggatgcaataagaataatgacacttgaaggat 762 ||||||||||| | ||||||||||||||||| ||| | ||||||||| ||||||| |||| Sbjct: 1736 agcttgatttcgctttccataggggcttggaggcagttagaataatggcacttgagggat 1795 Query: 763 tcaacaagagcgctactttcgtgaacaccgcccaatcatccgaaatgctgaatagatga 821 ||||||||||||| |||| ||||||||||| || || || |||||| ||||||||||| Sbjct: 1796 tcaacaagagcgcaacttatgtgaacaccgcacagtcctctgaaatgttgaatagatga 1854 Score = 99.6 bits (50), Expect = 2e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 627 ggcattggacgaccacctgggaagatggatcctgccaactttgttctcaggccattcacc 686 |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||| | | Sbjct: 1553 ggcattggacgaccacctgggaagatggatcctgccaattttgttctccgaccatttaac 1612 Query: 687 aaaaaagaacaagaagag 704 | ||||||||| |||||| Sbjct: 1613 agaaaagaacaggaagag 1630 Score = 95.6 bits (48), Expect = 3e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 374 aggtcgtattggagatgttcctatcatgcttgccaagccgcaaacgtttatgaatgcaag 433 ||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 639 aggtcgtattggagatgcccctatcatgctggccaagccacaaacttttatgaatgcaag 698 Query: 434 cggtgagtctgt 445 ||||||||||| Sbjct: 699 tggtgagtctgt 710 Score = 73.8 bits (37), Expect = 1e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 568 ggatgagaagcattatcaaccatctcaaacaaaatcgtgattttccacgtctaagaattg 627 ||||||||||||||||||||||| | || || || |||||||| |||||||||||||||| Sbjct: 1424 ggatgagaagcattatcaaccatttgaagcagaaccgtgatttcccacgtctaagaattg 1483 Query: 628 g 628 | Sbjct: 1484 g 1484 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 67 cggcgatgcagctgctctccggcgcctcggcctcccgcttcccctcgcccctcc 120 ||||||||| |||||||||||||||||| || ||||| |||||| ||||||| Sbjct: 47 cggcgatgcggctgctctccggcgcctctgcttcccgaatcccctgccccctcc 100
>gb|DQ244933.1| Zea mays clone 11846 mRNA sequence Length = 880 Score = 196 bits (99), Expect = 1e-46 Identities = 150/167 (89%) Strand = Plus / Plus Query: 210 ggtgacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatg 269 |||||||||||| |||||||||||||||| ||||| ||||| || |||||||| ||| || Sbjct: 190 ggtgacggcggctcgcggaagccgtggctcttcgtagggctgggtaaccccggaaaggtg 249 Query: 270 taccagaggactcgccacaacgttggattcgagatgattgatgctatagcagaagcagag 329 |||||| | ||||||||||||||||||||||||||||| |||| |||||||||||| ||| Sbjct: 250 taccagggaactcgccacaacgttggattcgagatgatcgatgttatagcagaagctgag 309 Query: 330 ggtgtatcactcagcggtatgcagttcaaggcaatggttggcaaagg 376 ||| |||| || ||| ||||||||||||||||||||||||| ||||| Sbjct: 310 ggtatatctctgagcagtatgcagttcaaggcaatggttggaaaagg 356
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 117 bits (59), Expect = 8e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 703 agcttgatttcacattccataggggcttggatgcaataagaataatgacacttgaaggat 762 ||||||||||| | ||||||||||||||||| ||| | ||||||||| ||||||| |||| Sbjct: 28651421 agcttgatttcgctttccataggggcttggaggcagttagaataatggcacttgagggat 28651362 Query: 763 tcaacaagagcgctactttcgtgaacaccgcccaatcatccgaaatgctgaatagatga 821 ||||||||||||| |||| ||||||||||| || || || |||||| ||||||||||| Sbjct: 28651361 tcaacaagagcgcaacttatgtgaacaccgcacagtcctctgaaatgttgaatagatga 28651303 Score = 109 bits (55), Expect = 2e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 291 gttggattcgagatgattgatgctatagcagaagcagagggtgtatcactcagcggtatg 350 |||||||||||||||||||||| |||||||||||| || ||| |||| |||||| ||||| Sbjct: 28652972 gttggattcgagatgattgatgttatagcagaagctgaaggtatatccctcagcagtatg 28652913 Query: 351 cagttcaaggcaatggttggcaaaggt 377 ||||||||||||||||| || |||||| Sbjct: 28652912 cagttcaaggcaatggtaggaaaaggt 28652886 Score = 99.6 bits (50), Expect = 2e-17 Identities = 71/78 (91%) Strand = Plus / Minus Query: 627 ggcattggacgaccacctgggaagatggatcctgccaactttgttctcaggccattcacc 686 |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||| | | Sbjct: 28651605 ggcattggacgaccacctgggaagatggatcctgccaattttgttctccgaccatttaac 28651546 Query: 687 aaaaaagaacaagaagag 704 | ||||||||| |||||| Sbjct: 28651545 agaaaagaacaggaagag 28651528 Score = 95.6 bits (48), Expect = 3e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 374 aggtcgtattggagatgttcctatcatgcttgccaagccgcaaacgtttatgaatgcaag 433 ||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 28652607 aggtcgtattggagatgcccctatcatgctggccaagccacaaacttttatgaatgcaag 28652548 Query: 434 cggtgagtctgt 445 ||||||||||| Sbjct: 28652547 tggtgagtctgt 28652536 Score = 95.6 bits (48), Expect = 3e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 213 gacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatgtac 272 ||||||||||||| |||||||||| ||||||| ||||| |||||||||||||| ||||| Sbjct: 28653536 gacggcggcgcgctgaagccgtggttgttcgtcgggctcgggaaccccgggaaagtgtac 28653477 Query: 273 cagaggactcgccacaacgt 292 || |||||||||||||||| Sbjct: 28653476 caagggactcgccacaacgt 28653457 Score = 87.7 bits (44), Expect = 7e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 494 gatgtacgatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggaca 553 |||||| |||||||| || || ||||| || ||||||||||||||||| ||||||||||| Sbjct: 28652312 gatgtatgatgatctagacttgccctttgcaaaattgcgtctactgccgaaaggtggaca 28652253 Query: 554 tggcgggcataatggg 569 |||||| ||||||||| Sbjct: 28652252 tggcggtcataatggg 28652237 Score = 71.9 bits (36), Expect = 4e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 447 gggcagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||| |||| |||||||||||||||||||||||||||||| ||||| Sbjct: 28652447 gggcagttggtctcatatttcaagataccacttaatcaagttcttgtg 28652400 Score = 67.9 bits (34), Expect = 7e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 571 tgagaagcattatcaaccatctcaaacaaaatcgtgattttccacgtctaagaattgg 628 |||||||||||||||||||| | || || || |||||||| ||||||||||||||||| Sbjct: 28651731 tgagaagcattatcaaccatttgaagcagaaccgtgatttcccacgtctaagaattgg 28651674 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Minus Query: 67 cggcgatgcagctgctctccggcgcctcggcctcccgcttcccctcgcccctcc 120 ||||||||| |||||||||||||||||| || ||||| |||||| ||||||| Sbjct: 28653685 cggcgatgcggctgctctccggcgcctctgcttcccgaatcccctgccccctcc 28653632
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 117 bits (59), Expect = 8e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 703 agcttgatttcacattccataggggcttggatgcaataagaataatgacacttgaaggat 762 ||||||||||| | ||||||||||||||||| ||| | ||||||||| ||||||| |||| Sbjct: 34495 agcttgatttcgctttccataggggcttggaggcagttagaataatggcacttgagggat 34436 Query: 763 tcaacaagagcgctactttcgtgaacaccgcccaatcatccgaaatgctgaatagatga 821 ||||||||||||| |||| ||||||||||| || || || |||||| ||||||||||| Sbjct: 34435 tcaacaagagcgcaacttatgtgaacaccgcacagtcctctgaaatgttgaatagatga 34377 Score = 109 bits (55), Expect = 2e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 291 gttggattcgagatgattgatgctatagcagaagcagagggtgtatcactcagcggtatg 350 |||||||||||||||||||||| |||||||||||| || ||| |||| |||||| ||||| Sbjct: 36046 gttggattcgagatgattgatgttatagcagaagctgaaggtatatccctcagcagtatg 35987 Query: 351 cagttcaaggcaatggttggcaaaggt 377 ||||||||||||||||| || |||||| Sbjct: 35986 cagttcaaggcaatggtaggaaaaggt 35960 Score = 99.6 bits (50), Expect = 2e-17 Identities = 71/78 (91%) Strand = Plus / Minus Query: 627 ggcattggacgaccacctgggaagatggatcctgccaactttgttctcaggccattcacc 686 |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||| | | Sbjct: 34679 ggcattggacgaccacctgggaagatggatcctgccaattttgttctccgaccatttaac 34620 Query: 687 aaaaaagaacaagaagag 704 | ||||||||| |||||| Sbjct: 34619 agaaaagaacaggaagag 34602 Score = 95.6 bits (48), Expect = 3e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 374 aggtcgtattggagatgttcctatcatgcttgccaagccgcaaacgtttatgaatgcaag 433 ||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 35681 aggtcgtattggagatgcccctatcatgctggccaagccacaaacttttatgaatgcaag 35622 Query: 434 cggtgagtctgt 445 ||||||||||| Sbjct: 35621 tggtgagtctgt 35610 Score = 95.6 bits (48), Expect = 3e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 213 gacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatgtac 272 ||||||||||||| |||||||||| ||||||| ||||| |||||||||||||| ||||| Sbjct: 36610 gacggcggcgcgctgaagccgtggttgttcgtcgggctcgggaaccccgggaaagtgtac 36551 Query: 273 cagaggactcgccacaacgt 292 || |||||||||||||||| Sbjct: 36550 caagggactcgccacaacgt 36531 Score = 87.7 bits (44), Expect = 7e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 494 gatgtacgatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggaca 553 |||||| |||||||| || || ||||| || ||||||||||||||||| ||||||||||| Sbjct: 35386 gatgtatgatgatctagacttgccctttgcaaaattgcgtctactgccgaaaggtggaca 35327 Query: 554 tggcgggcataatggg 569 |||||| ||||||||| Sbjct: 35326 tggcggtcataatggg 35311 Score = 71.9 bits (36), Expect = 4e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 447 gggcagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||| |||| |||||||||||||||||||||||||||||| ||||| Sbjct: 35521 gggcagttggtctcatatttcaagataccacttaatcaagttcttgtg 35474 Score = 67.9 bits (34), Expect = 7e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 571 tgagaagcattatcaaccatctcaaacaaaatcgtgattttccacgtctaagaattgg 628 |||||||||||||||||||| | || || || |||||||| ||||||||||||||||| Sbjct: 34805 tgagaagcattatcaaccatttgaagcagaaccgtgatttcccacgtctaagaattgg 34748 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Minus Query: 67 cggcgatgcagctgctctccggcgcctcggcctcccgcttcccctcgcccctcc 120 ||||||||| |||||||||||||||||| || ||||| |||||| ||||||| Sbjct: 36759 cggcgatgcggctgctctccggcgcctctgcttcccgaatcccctgccccctcc 36706
>gb|DQ429329.1| Sorghum propinquum locus pSB0772 genomic sequence Length = 681 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| |||||||| || |||||||| ||| Sbjct: 188 gatgatcttgatctaccctttgcgaaattgcgtctgctgccaaaggggggacatggtggg 247 Query: 561 cataatggg 569 || |||||| Sbjct: 248 cacaatggg 256 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||||||| |||||||||||||| |||||| | |||||| Sbjct: 60 cagctggtttcatacttcaagataccactcaatcaattagttgtg 104
>ref|NM_101701.2| Arabidopsis thaliana aminoacyl-tRNA hydrolase (AT1G18440) mRNA, complete cds Length = 1109 Score = 71.9 bits (36), Expect = 4e-09 Identities = 189/240 (78%) Strand = Plus / Plus Query: 435 ggtgagtctgttgggcagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||||||| || | ||||||| || |||||| || | || ||||| ||||| Sbjct: 502 ggtgagtctgttggacaaatcgtttcattttacaagatcccgttaaagcaagtacttgtg 561 Query: 495 atgtacgatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacat 554 | ||||||||| | ||||| ||||| | ||| | ||| || ||||||||||||| || Sbjct: 562 gtttacgatgatttagatttgccctttggtaaactacgtttattgccaaaaggtggtcac 621 Query: 555 ggcgggcataatgggatgagaagcattatcaaccatctcaaacaaaatcgtgattttcca 614 || || || |||||||||||||| ||||| ||| |||||| | ||||||||||| Sbjct: 622 ggaggccacaatgggatgagaagtattatagaccgcctcaaaggtagccgtgattttcct 681 Query: 615 cgtctaagaattggcattggacgaccacctgggaagatggatcctgccaactttgttctc 674 || |||||||| || || ||||| || || |||||||||||| | ||||| ||||||||| Sbjct: 682 cgactaagaatagggatcggacgtcctccagggaagatggatacagccaattttgttctc 741
>gb|BT005284.1| Arabidopsis thaliana At1g18440 mRNA, complete cds Length = 867 Score = 71.9 bits (36), Expect = 4e-09 Identities = 189/240 (78%) Strand = Plus / Plus Query: 435 ggtgagtctgttgggcagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||||||| || | ||||||| || |||||| || | || ||||| ||||| Sbjct: 484 ggtgagtctgttggacaaatcgtttcattttacaagatcccgttaaagcaagtacttgtg 543 Query: 495 atgtacgatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacat 554 | ||||||||| | ||||| ||||| | ||| | ||| || ||||||||||||| || Sbjct: 544 gtttacgatgatttagatttgccctttggtaaactacgtttattgccaaaaggtggtcac 603 Query: 555 ggcgggcataatgggatgagaagcattatcaaccatctcaaacaaaatcgtgattttcca 614 || || || |||||||||||||| ||||| ||| |||||| | ||||||||||| Sbjct: 604 ggaggccacaatgggatgagaagtattatagaccgcctcaaaggtagccgtgattttcct 663 Query: 615 cgtctaagaattggcattggacgaccacctgggaagatggatcctgccaactttgttctc 674 || |||||||| || || ||||| || || |||||||||||| | ||||| ||||||||| Sbjct: 664 cgactaagaatagggatcggacgtcctccagggaagatggatacagccaattttgttctc 723
>dbj|AK119054.1| Arabidopsis thaliana At1g18440 mRNA for unknown protein, complete cds, clone: RAFL21-39-I07 Length = 1109 Score = 71.9 bits (36), Expect = 4e-09 Identities = 189/240 (78%) Strand = Plus / Plus Query: 435 ggtgagtctgttgggcagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||||||| || | ||||||| || |||||| || | || ||||| ||||| Sbjct: 502 ggtgagtctgttggacaaatcgtttcattttacaagatcccgttaaagcaagtacttgtg 561 Query: 495 atgtacgatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacat 554 | ||||||||| | ||||| ||||| | ||| | ||| || ||||||||||||| || Sbjct: 562 gtttacgatgatttagatttgccctttggtaaactacgtttattgccaaaaggtggtcac 621 Query: 555 ggcgggcataatgggatgagaagcattatcaaccatctcaaacaaaatcgtgattttcca 614 || || || |||||||||||||| ||||| ||| |||||| | ||||||||||| Sbjct: 622 ggaggccacaatgggatgagaagtattatagaccgcctcaaaggtagccgtgattttcct 681 Query: 615 cgtctaagaattggcattggacgaccacctgggaagatggatcctgccaactttgttctc 674 || |||||||| || || ||||| || || |||||||||||| | ||||| ||||||||| Sbjct: 682 cgactaagaatagggatcggacgtcctccagggaagatggatacagccaattttgttctc 741
>gb|DQ429328.1| Sorghum bicolor voucher PI585454 locus pSB0772 genomic sequence Length = 682 Score = 65.9 bits (33), Expect = 3e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| |||||||| || |||||||| || Sbjct: 188 gatgatcttgatctaccctttgcgaaattgcgtctgctgccaaaggggggacatggtgga 247 Query: 561 cataatggg 569 || |||||| Sbjct: 248 cacaatggg 256 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 64 tggtttcatacttcaagataccactcaatcaattagttgtg 104
>gb|DQ429314.1| Sorghum bicolor voucher NSL51030 locus pSB0772 genomic sequence Length = 682 Score = 65.9 bits (33), Expect = 3e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| |||||||| || |||||||| || Sbjct: 188 gatgatcttgatctaccctttgcgaaattgcgtctgctgccaaaggggggacatggtgga 247 Query: 561 cataatggg 569 || |||||| Sbjct: 248 cacaatggg 256 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 64 tggtttcatacttcaagataccactcaatcaattagttgtg 104
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 65.9 bits (33), Expect = 3e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| || ||||||| || |||||||| ||||||| ||||| |||||||||||| Sbjct: 74844 gatgatctagacataccctttgcaaaattgcgcttactgcctaaaggaggacatggcggg 74903 Query: 561 cataatggg 569 ||||||||| Sbjct: 74904 cataatggg 74912 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 227 gaagccgtggctgttcgttgggctagggaaccccgggaagatgtaccagaggactcgcca 286 ||||||||||||| || | ||||| ||||||||||| | ||||||| || ||||||| || Sbjct: 73551 gaagccgtggctgctcatcgggctcgggaaccccggcaggatgtacaaggggactcgtca 73610 Query: 287 caacgt 292 |||||| Sbjct: 73611 caacgt 73616 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 ||||||||||||||||| ||||||||||| | ||||||| ||||| Sbjct: 74716 cagctggtttcatattttaagataccactcagtcaagttcttgtg 74760 Score = 48.1 bits (24), Expect = 0.063 Identities = 36/40 (90%) Strand = Plus / Plus Query: 665 ctttgttctcaggccattcaccaaaaaagaacaagaagag 704 ||||||||| ||| |||||||||| |||||||||||||| Sbjct: 75544 ctttgttctaaggtcattcaccaaggaagaacaagaagag 75583 Score = 46.1 bits (23), Expect = 0.25 Identities = 41/47 (87%) Strand = Plus / Plus Query: 399 atgcttgccaagccgcaaacgtttatgaatgcaagcggtgagtctgt 445 |||||||||||||| || || | ||||||||||| ||||||||||| Sbjct: 74582 atgcttgccaagccacagacttacatgaatgcaagtggtgagtctgt 74628 Score = 44.1 bits (22), Expect = 0.99 Identities = 58/70 (82%) Strand = Plus / Plus Query: 721 ataggggcttggatgcaataagaataatgacacttgaaggattcaacaagagcgctactt 780 ||||| ||||| | ||| |||| |||||| ||| ||||||||||||||| | || |||| Sbjct: 75770 ataggagcttgcaagcagtaaggataatgctactcgaaggattcaacaagggtgcaactt 75829 Query: 781 tcgtgaacac 790 | |||||||| Sbjct: 75830 ttgtgaacac 75839 Score = 42.1 bits (21), Expect = 3.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 568 ggatgagaagcattatcaaccatctcaaacaaaatcgtgattttccacg 616 |||||||||||||||| |||||| | ||||| | |||||||| ||||| Sbjct: 75374 ggatgagaagcattattaaccatttgaaacagagccgtgatttcccacg 75422
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 65.9 bits (33), Expect = 3e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| || ||||||| || |||||||| ||||||| ||||| |||||||||||| Sbjct: 99346 gatgatctagacataccctttgcaaaattgcgcttactgcctaaaggaggacatggcggg 99405 Query: 561 cataatggg 569 ||||||||| Sbjct: 99406 cataatggg 99414 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 227 gaagccgtggctgttcgttgggctagggaaccccgggaagatgtaccagaggactcgcca 286 ||||||||||||| || | ||||| ||||||||||| | ||||||| || ||||||| || Sbjct: 98053 gaagccgtggctgctcatcgggctcgggaaccccggcaggatgtacaaggggactcgtca 98112 Query: 287 caacgt 292 |||||| Sbjct: 98113 caacgt 98118 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 ||||||||||||||||| ||||||||||| | ||||||| ||||| Sbjct: 99218 cagctggtttcatattttaagataccactcagtcaagttcttgtg 99262 Score = 48.1 bits (24), Expect = 0.063 Identities = 36/40 (90%) Strand = Plus / Plus Query: 665 ctttgttctcaggccattcaccaaaaaagaacaagaagag 704 ||||||||| ||| |||||||||| |||||||||||||| Sbjct: 100047 ctttgttctaaggtcattcaccaaggaagaacaagaagag 100086 Score = 46.1 bits (23), Expect = 0.25 Identities = 41/47 (87%) Strand = Plus / Plus Query: 399 atgcttgccaagccgcaaacgtttatgaatgcaagcggtgagtctgt 445 |||||||||||||| || || | ||||||||||| ||||||||||| Sbjct: 99084 atgcttgccaagccacagacttacatgaatgcaagtggtgagtctgt 99130 Score = 44.1 bits (22), Expect = 0.99 Identities = 58/70 (82%) Strand = Plus / Plus Query: 721 ataggggcttggatgcaataagaataatgacacttgaaggattcaacaagagcgctactt 780 ||||| ||||| | ||| |||| |||||| ||| ||||||||||||||| | || |||| Sbjct: 100273 ataggagcttgcaagcagtaaggataatgctactcgaaggattcaacaagggtgcaactt 100332 Query: 781 tcgtgaacac 790 | |||||||| Sbjct: 100333 ttgtgaacac 100342 Score = 42.1 bits (21), Expect = 3.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 568 ggatgagaagcattatcaaccatctcaaacaaaatcgtgattttccacg 616 |||||||||||||||| |||||| | ||||| | |||||||| ||||| Sbjct: 99877 ggatgagaagcattattaaccatttgaaacagagccgtgatttcccacg 99925
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 65.9 bits (33), Expect = 3e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| || ||||||| || |||||||| ||||||| ||||| |||||||||||| Sbjct: 27068262 gatgatctagacataccctttgcaaaattgcgcttactgcctaaaggaggacatggcggg 27068321 Query: 561 cataatggg 569 ||||||||| Sbjct: 27068322 cataatggg 27068330 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 227 gaagccgtggctgttcgttgggctagggaaccccgggaagatgtaccagaggactcgcca 286 ||||||||||||| || | ||||| ||||||||||| | ||||||| || ||||||| || Sbjct: 27066969 gaagccgtggctgctcatcgggctcgggaaccccggcaggatgtacaaggggactcgtca 27067028 Query: 287 caacgt 292 |||||| Sbjct: 27067029 caacgt 27067034 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 ||||||||||||||||| ||||||||||| | ||||||| ||||| Sbjct: 27068134 cagctggtttcatattttaagataccactcagtcaagttcttgtg 27068178 Score = 48.1 bits (24), Expect = 0.063 Identities = 36/40 (90%) Strand = Plus / Plus Query: 665 ctttgttctcaggccattcaccaaaaaagaacaagaagag 704 ||||||||| ||| |||||||||| |||||||||||||| Sbjct: 27068963 ctttgttctaaggtcattcaccaaggaagaacaagaagag 27069002 Score = 46.1 bits (23), Expect = 0.25 Identities = 41/47 (87%) Strand = Plus / Plus Query: 399 atgcttgccaagccgcaaacgtttatgaatgcaagcggtgagtctgt 445 |||||||||||||| || || | ||||||||||| ||||||||||| Sbjct: 27068000 atgcttgccaagccacagacttacatgaatgcaagtggtgagtctgt 27068046 Score = 44.1 bits (22), Expect = 0.99 Identities = 58/70 (82%) Strand = Plus / Plus Query: 721 ataggggcttggatgcaataagaataatgacacttgaaggattcaacaagagcgctactt 780 ||||| ||||| | ||| |||| |||||| ||| ||||||||||||||| | || |||| Sbjct: 27069189 ataggagcttgcaagcagtaaggataatgctactcgaaggattcaacaagggtgcaactt 27069248 Query: 781 tcgtgaacac 790 | |||||||| Sbjct: 27069249 ttgtgaacac 27069258 Score = 42.1 bits (21), Expect = 3.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 568 ggatgagaagcattatcaaccatctcaaacaaaatcgtgattttccacg 616 |||||||||||||||| |||||| | ||||| | |||||||| ||||| Sbjct: 27068793 ggatgagaagcattattaaccatttgaaacagagccgtgatttcccacg 27068841
>emb|BX813553.1|CNS0AAJW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB24ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1387 Score = 65.9 bits (33), Expect = 3e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 538 tgccaaaaggtggacatggcgggcataatgggatgagaagcattatcaaccatctcaaac 597 ||||||||||||| || || || || |||||||||||||| ||||| ||| |||||| Sbjct: 971 tgccaaaaggtggtcacggaggccacaatgggatgagaagtattatagaccgcctcaaag 1030 Query: 598 aaaatcgtgattttccacgtctaagaattggcattggacgaccacctgggaagatggatc 657 | ||||||||||| || |||||||| || || ||||| || || |||||||||||| Sbjct: 1031 gtagccgtgattttcctcgactaagaatagggatcggacgtcctccagggaagatggata 1090 Query: 658 ctgccaactttgttctc 674 | ||||| ||||||||| Sbjct: 1091 cagccaattttgttctc 1107
>dbj|AK242716.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090043H02, full insert sequence Length = 4392 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 427 atgcaagcggtgagtctgttgggcagctggtttcatatttcaagataccact 478 |||||||||| ||||| ||| | ||||||||||||||||| ||||||||||| Sbjct: 4335 atgcaagcggcgagtccgtttgacagctggtttcatattttaagataccact 4386
>gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete sequence Length = 122694 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 627 ggcattggacgaccacctgggaagatggatcctg 660 |||||||||||||| ||||||||||||||||||| Sbjct: 79336 ggcattggacgacctcctgggaagatggatcctg 79303
>gb|DQ429327.1| Sorghum bicolor voucher PI267539 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429326.1| Sorghum bicolor voucher PI267408 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429325.1| Sorghum bicolor voucher PI221607 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429324.1| Sorghum bicolor voucher PI152702 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429323.1| Sorghum bicolor voucher NSL92371 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429322.1| Sorghum bicolor voucher NSL87902 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429321.1| Sorghum bicolor voucher NSL87666 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429320.1| Sorghum bicolor voucher NSL77217 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429319.1| Sorghum bicolor voucher NSL77034 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429318.1| Sorghum bicolor voucher NSL56174 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429317.1| Sorghum bicolor voucher NSL56003 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429316.1| Sorghum bicolor voucher NSL55243 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429315.1| Sorghum bicolor voucher NSL51365 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429313.1| Sorghum bicolor voucher NSL50875 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>gb|DQ429312.1| Sorghum bicolor voucher BTx623 locus pSB0772 genomic sequence Length = 690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 501 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 560 |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255 Query: 561 cataatggg 569 || |||||| Sbjct: 256 cacaatggg 264 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 454 tggtttcatatttcaagataccacttaatcaagttgttgtg 494 |||||||||| |||||||||||||| |||||| | |||||| Sbjct: 72 tggtttcatacttcaagataccactcaatcaattagttgtg 112
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 450 cagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 ||||||||||||||||| ||||||||||| | ||||||| ||||| Sbjct: 15891823 cagctggtttcatattttaagataccactcagtcaagttcttgtg 15891779 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Minus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 13743790 cagctggtttcatattttaagataccact 13743762 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 21530014 cagctggtttcatattttaagataccact 21530042
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031P18 Length = 156535 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 450 cagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 ||||||||||||||||| ||||||||||| | ||||||| ||||| Sbjct: 25272 cagctggtttcatattttaagataccactcagtcaagttcttgtg 25228
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 450 cagctggtttcatatttcaagataccacttaatcaagttgttgtg 494 ||||||||||||||||| ||||||||||| | ||||||| ||||| Sbjct: 104826 cagctggtttcatattttaagataccactcagtcaagttcttgtg 104782
>emb|CT837647.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA018L19, full insert sequence Length = 885 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 611 cagctggtttcatattttaagataccact 639
>ref|NM_001068153.1| Oryza sativa (japonica cultivar-group) Os08g0355500 (Os08g0355500) mRNA, complete cds Length = 1002 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 462 cagctggtttcatatttaaagataccact 490
>ref|NM_001064431.1| Oryza sativa (japonica cultivar-group) Os06g0566700 (Os06g0566700) mRNA, complete cds Length = 669 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 621 cagctggtttcatattttaagataccact 649
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Minus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 16232043 cagctggtttcatatttaaagataccact 16232015
>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021N09 Length = 156565 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Minus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 151123 cagctggtttcatattttaagataccact 151095
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 87198 cagctggtttcatattttaagataccact 87226
>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1104G07 Length = 119643 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Minus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 22221 cagctggtttcatatttaaagataccact 22193
>dbj|AK119697.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D01, full insert sequence Length = 747 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 539 cagctggtttcatatttaaagataccact 567
>dbj|AK106035.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D07, full insert sequence Length = 1002 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 462 cagctggtttcatatttaaagataccact 490
>dbj|AK102838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109M01, full insert sequence Length = 2519 Score = 50.1 bits (25), Expect = 0.016 Identities = 28/29 (96%) Strand = Plus / Plus Query: 450 cagctggtttcatatttcaagataccact 478 ||||||||||||||||| ||||||||||| Sbjct: 959 cagctggtttcatatttaaagataccact 987
>gb|AC152123.1| Genomic sequence for broccoli [Brassica oleracea L. (Italica group)] BAC clone B21F5, complete sequence Length = 82329 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 529 tgcgtctactgccaaaaggtggacatggcgggcataatggg 569 ||||| |||||||||||||||| ||||| ||||| |||||| Sbjct: 39196 tgcgtttactgccaaaaggtggccatggggggcacaatggg 39236
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 48.1 bits (24), Expect = 0.063 Identities = 36/40 (90%) Strand = Plus / Plus Query: 665 ctttgttctcaggccattcaccaaaaaagaacaagaagag 704 ||||||||| ||| |||||||||| |||||||||||||| Sbjct: 359 ctttgttctaaggtcattcaccaaggaagaacaagaagag 398 Score = 44.1 bits (22), Expect = 0.99 Identities = 58/70 (82%) Strand = Plus / Plus Query: 721 ataggggcttggatgcaataagaataatgacacttgaaggattcaacaagagcgctactt 780 ||||| ||||| | ||| |||| |||||| ||| ||||||||||||||| | || |||| Sbjct: 585 ataggagcttgcaagcagtaaggataatgctactcgaaggattcaacaagggtgcaactt 644 Query: 781 tcgtgaacac 790 | |||||||| Sbjct: 645 ttgtgaacac 654 Score = 42.1 bits (21), Expect = 3.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 568 ggatgagaagcattatcaaccatctcaaacaaaatcgtgattttccacg 616 |||||||||||||||| |||||| | ||||| | |||||||| ||||| Sbjct: 189 ggatgagaagcattattaaccatttgaaacagagccgtgatttcccacg 237
>gb|AC037459.16| Homo sapiens chromosome 8, clone RP11-582J16, complete sequence Length = 174888 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 97 cctcccgcttcccctcgcccctcccct 123 |||||| |||||||||||||||||||| Sbjct: 120194 cctcccccttcccctcgcccctcccct 120220
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 44.1 bits (22), Expect = 0.99 Identities = 28/30 (93%) Strand = Plus / Minus Query: 399 atgcttgccaagccgcaaacgtttatgaat 428 ||||| ||||| |||||||||||||||||| Sbjct: 8908796 atgctggccaaaccgcaaacgtttatgaat 8908767
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 682 tcaccaaaaaagaacaagaaga 703 |||||||||||||||||||||| Sbjct: 4947 tcaccaaaaaagaacaagaaga 4968
>dbj|AK109215.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-D09, full insert sequence Length = 656 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 tggtggtgccggcgacagcggcggcg 71 |||||||| ||||||||||||||||| Sbjct: 296 tggtggtggcggcgacagcggcggcg 271
>gb|AC188855.2| Phakopsora pachyrhizi clone JGIAFNA-1537B9, complete sequence Length = 39565 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 943 ccccacactgaaaaccaaagcttta 967 |||||| |||||||||||||||||| Sbjct: 2946 ccccactctgaaaaccaaagcttta 2922 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 943 ccccacactgaaaaccaaagcttta 967 |||||| |||||||||||||||||| Sbjct: 8362 ccccactctgaaaaccaaagcttta 8338 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 943 ccccacactgaaaaccaaagcttta 967 |||||| |||||||||||||||||| Sbjct: 12639 ccccactctgaaaaccaaagcttta 12615
>ref|NM_020971.2| Homo sapiens spectrin, beta, non-erythrocytic 4 (SPTBN4), transcript variant sigma1, mRNA Length = 8705 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 gcttcccctcgcccctcccct 123 ||||||||||||||||||||| Sbjct: 8525 gcttcccctcgcccctcccct 8505
>ref|XM_001138822.1| PREDICTED: Pan troglodytes hypothetical protein LOC738130 (LOC738130), mRNA Length = 992 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 gcttcccctcgcccctcccct 123 ||||||||||||||||||||| Sbjct: 163 gcttcccctcgcccctcccct 183
>gb|DQ899506.1| Synthetic construct Vibrio cholerae clone FLH236337.01F pth gene, complete sequence Length = 591 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 549 ggacatggcgggcataatggg 569 ||||||||||||||||||||| Sbjct: 334 ggacatggcgggcataatggg 354
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 gccggcgacagcggcggcgat 73 ||||||||||||||||||||| Sbjct: 6220786 gccggcgacagcggcggcgat 6220806
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 ctggtgcccaattggtggtgc 54 ||||||||||||||||||||| Sbjct: 45734 ctggtgcccaattggtggtgc 45754
>gb|AC163447.5| Mus musculus chromosome 7, clone RP24-314E16, complete sequence Length = 135851 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 ctggtgcccaattggtggtgc 54 ||||||||||||||||||||| Sbjct: 128196 ctggtgcccaattggtggtgc 128216
>gb|AC149372.1| Phakopsora pachyrhizi clone JGIAFNA-5A1, complete sequence Length = 31316 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 943 ccccacactgaaaaccaaagcttta 967 |||||| |||||||||||||||||| Sbjct: 22699 ccccaccctgaaaaccaaagcttta 22675
>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence Length = 200595 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 900 ttttcagttatttgcattgtg 920 ||||||||||||||||||||| Sbjct: 109865 ttttcagttatttgcattgtg 109845
>gb|AF324063.1| Homo sapiens non-erythrocytic beta-spectrin 4 (SPNB4) mRNA, complete cds Length = 8671 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 gcttcccctcgcccctcccct 123 ||||||||||||||||||||| Sbjct: 8509 gcttcccctcgcccctcccct 8489
>gb|AE004290.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 198 of 251 of the complete chromosome Length = 10581 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 549 ggacatggcgggcataatggg 569 ||||||||||||||||||||| Sbjct: 448 ggacatggcgggcataatggg 468
>dbj|AK054915.1| Homo sapiens cDNA FLJ30353 fis, clone BRACE2007663 Length = 1884 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 gcttcccctcgcccctcccct 123 ||||||||||||||||||||| Sbjct: 1724 gcttcccctcgcccctcccct 1704
>gb|AC020929.6| Homo sapiens chromosome 19 clone CTD-2223D2, complete sequence Length = 119569 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 gcttcccctcgcccctcccct 123 ||||||||||||||||||||| Sbjct: 112771 gcttcccctcgcccctcccct 112751
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 50 ggtgccggcgacagcggcggcgatg 74 |||| |||||||||||||||||||| Sbjct: 621721 ggtggcggcgacagcggcggcgatg 621745
>gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, complete sequence Length = 203375 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 ggcagcctcctcgtcagctgc 202 ||||||||||||||||||||| Sbjct: 52897 ggcagcctcctcgtcagctgc 52877
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 823 aaaccaattgattcatttttt 843 ||||||||||||||||||||| Sbjct: 922999 aaaccaattgattcatttttt 923019
>gb|AC016957.49| Homo sapiens 12 BAC RP11-50I19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 50743 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 900 ttttcagttatttgcattgtg 920 ||||||||||||||||||||| Sbjct: 11417 ttttcagttatttgcattgtg 11437
>gb|AF082075.1|AF082075 Homo sapiens beta4sigma1 spectrin mRNA, complete cds Length = 8788 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 gcttcccctcgcccctcccct 123 ||||||||||||||||||||| Sbjct: 8586 gcttcccctcgcccctcccct 8566
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 73 tgcagctgctctccggcgcctcggcctcc 101 ||||||||||||||| |||||||| |||| Sbjct: 6713478 tgcagctgctctccgacgcctcggtctcc 6713450
>emb|CR613374.1| full-length cDNA clone CS0DN001YL18 of Adult brain of Homo sapiens (human) Length = 990 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 gcttcccctcgcccctcccct 123 ||||||||||||||||||||| Sbjct: 830 gcttcccctcgcccctcccct 810
>gb|AC073385.14| Homo sapiens chromosome 8, clone RP11-304E16, complete sequence Length = 125535 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 ggcagcctcctcgtcagctgc 202 ||||||||||||||||||||| Sbjct: 32640 ggcagcctcctcgtcagctgc 32660
>gb|AC134542.3| Mus musculus BAC clone RP24-441E15 from 6, complete sequence Length = 175750 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gattgatgctatagcagaagc 325 ||||||||||||||||||||| Sbjct: 89744 gattgatgctatagcagaagc 89764 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 189,732,043 Number of extensions: 11025128 Number of successful extensions: 349384 Number of sequences better than 10.0: 78 Number of HSP's gapped: 349380 Number of HSP's successfully gapped: 152 Length of query: 1034 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1011 Effective length of database: 18,503,978,556 Effective search space: 18707522320116 Effective search space used: 18707522320116 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
