ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf114e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001050094.1| Oryza sativa (japonica cultivar-group) Os01g... 278 2e-71
2dbj|AK071035.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 2e-71
3gb|AY108478.1| Zea mays PCO142991 mRNA sequence 159 2e-35
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 153 1e-33
5dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic D... 153 1e-33
6dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 153 1e-33
7emb|CT828634.1| Oryza sativa (indica cultivar-group) cDNA clone:... 98 5e-17
8gb|AC159322.2| Mus musculus BAC clone RP23-33M5 from chromosome ... 52 0.003
9gb|AC087183.9| Mus musculus Strain C57BL6/J Chromosome 8 RP23-31... 52 0.003
10dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 48 0.041
11dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.16
12dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
13gb|AC101872.7| Mus musculus chromosome 17, clone RP23-358C2, com... 44 0.64
14gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.64
15emb|CT486002.9| Mouse DNA sequence from clone RP23-396G8 on chro... 44 0.64
16ref|NM_001014893.1| Bos taurus btKIAA1539 (KIAA1539), mRNA >gi|6... 42 2.5
17gb|AC113104.15| Mus musculus chromosome 18, clone RP23-321L15, c... 42 2.5
18gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genom... 42 2.5
19gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 2.5
20gb|U23523.1| Caenorhabditis elegans cosmid F53A9, complete sequence 42 2.5
21gb|AC158975.9| Mus musculus chromosome 18, clone RP24-192J22, co... 42 2.5
22dbj|AK147472.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 42 2.5
23ref|NM_001029532.1| Caenorhabditis elegans TropoNin T family mem... 42 2.5
24ref|NM_001029533.1| Caenorhabditis elegans TropoNin T family mem... 42 2.5
25gb|AC091487.10| Homo sapiens chromosome 10 clone RP11-478A11, co... 42 2.5
26dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
27emb|AL357394.11| Human DNA sequence from clone RP11-469B13 on ch... 42 2.5
28dbj|AP004953.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 2.5
29gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 2.5
30emb|AL928959.9| Mouse DNA sequence from clone RP23-73I19 on chro... 42 2.5
31gb|U28739.1| Caenorhabditis elegans cosmid C17G10, complete sequ... 42 2.5
32gb|AF003386.1| Caenorhabditis elegans cosmid F59E12, complete se... 42 2.5 
>ref|NM_001050094.1| Oryza sativa (japonica cultivar-group) Os01g0612800 (Os01g0612800)
           mRNA, complete cds
          Length = 604
 Score =  278 bits (140), Expect = 2e-71
 Identities = 251/288 (87%)
 Strand = Plus / Plus

                                                                       
Query: 66  gccgcggcgtacttcggcggcggcttcctcctcctctccacagcatccaccgtcgccgta 125
           |||||||||||| |||||||||||||||||||||||||| | || ||| ||| |||||| 
Sbjct: 120 gccgcggcgtacctcggcggcggcttcctcctcctctccgccgcgtcctccgccgccgtc 179

                                                                       
Query: 126 cgctccctccgctttctctccgataccaaccagagaaaattcgcgatgcagtgtggtgca 185
           |||||||||||||  ||||||||  |||||||||| |||||||||  || |||||| || 
Sbjct: 180 cgctccctccgctccctctccgacgccaaccagaggaaattcgcggcgccgtgtggcgcc 239

                                                                       
Query: 186 tgcgaggggaagggaacctacgggtgcaggctctgcaggggtagctccacggtcgaatgg 245
           |||||||||||||| ||||||| |||||||||||||||||| ||||| ||| |||| |||
Sbjct: 240 tgcgaggggaaggggacctacgcgtgcaggctctgcaggggcagctcgacgatcgagtgg 299

                                                                       
Query: 246 tctccgctctacgacccggtattcgttaacccgtgcatctgccctacttgtgatggtact 305
           ||||||||| |||||||||| ||||| ||||||||| |||||||||| ||||| || |||
Sbjct: 300 tctccgctccacgacccggtgttcgtcaacccgtgcctctgccctacctgtgacgggact 359

                                                           
Query: 306 agggtacagcggtgcttgaattgcctgggcaaaggctatgcatgaagg 353
           ||||| ||||| |||||||| ||||| || |||||||| || ||||||
Sbjct: 360 agggtgcagcgctgcttgaactgccttggaaaaggctacgcttgaagg 407
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>dbj|AK071035.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078J12, full
           insert sequence
          Length = 606

 Score =  278 bits (140), Expect = 2e-71
 Identities = 251/288 (87%)
 Strand = Plus / Plus

                                                                       
Query: 66  gccgcggcgtacttcggcggcggcttcctcctcctctccacagcatccaccgtcgccgta 125
           |||||||||||| |||||||||||||||||||||||||| | || ||| ||| |||||| 
Sbjct: 122 gccgcggcgtacctcggcggcggcttcctcctcctctccgccgcgtcctccgccgccgtc 181

                                                                       
Query: 126 cgctccctccgctttctctccgataccaaccagagaaaattcgcgatgcagtgtggtgca 185
           |||||||||||||  ||||||||  |||||||||| |||||||||  || |||||| || 
Sbjct: 182 cgctccctccgctccctctccgacgccaaccagaggaaattcgcggcgccgtgtggcgcc 241

                                                                       
Query: 186 tgcgaggggaagggaacctacgggtgcaggctctgcaggggtagctccacggtcgaatgg 245
           |||||||||||||| ||||||| |||||||||||||||||| ||||| ||| |||| |||
Sbjct: 242 tgcgaggggaaggggacctacgcgtgcaggctctgcaggggcagctcgacgatcgagtgg 301

                                                                       
Query: 246 tctccgctctacgacccggtattcgttaacccgtgcatctgccctacttgtgatggtact 305
           ||||||||| |||||||||| ||||| ||||||||| |||||||||| ||||| || |||
Sbjct: 302 tctccgctccacgacccggtgttcgtcaacccgtgcctctgccctacctgtgacgggact 361

                                                           
Query: 306 agggtacagcggtgcttgaattgcctgggcaaaggctatgcatgaagg 353
           ||||| ||||| |||||||| ||||| || |||||||| || ||||||
Sbjct: 362 agggtgcagcgctgcttgaactgccttggaaaaggctacgcttgaagg 409
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>gb|AY108478.1| Zea mays PCO142991 mRNA sequence
          Length = 461

 Score =  159 bits (80), Expect = 2e-35
 Identities = 212/256 (82%)
 Strand = Plus / Plus

                                                                       
Query: 79  tcggcggcggcttcctcctcctctccacagcatccaccgtcgccgtacgctccctccgct 138
           |||||||||| ||||||||||||||| |  | ||  |||||||||| ||| |||||||| 
Sbjct: 160 tcggcggcggtttcctcctcctctccgccacctcttccgtcgccgtccgcgccctccgcg 219

                                                                       
Query: 139 ttctctccgataccaaccagagaaaattcgcgatgcagtgtggtgcatgcgaggggaagg 198
              |||||||  |||||||||| || ||||||| || ||| ||||| |||||||||||||
Sbjct: 220 ccatctccgacgccaaccagaggaagttcgcgaagccgtgcggtgcctgcgaggggaagg 279

                                                                       
Query: 199 gaacctacgggtgcaggctctgcaggggtagctccacggtcgaatggtctccgctctacg 258
           | | ||||  |||||||||||||||||| ||| ||||  |||| ||||||||| |  |||
Sbjct: 280 gcagctactcgtgcaggctctgcaggggcagcgccaccatcgagtggtctccgatgcacg 339

                                                                       
Query: 259 acccggtattcgttaacccgtgcatctgccctacttgtgatggtactagggtacagcggt 318
           ||||||| ||||| || |||||| |||||||||| || ||||| ||| |||| ||||| |
Sbjct: 340 acccggtgttcgtcaatccgtgcctctgccctacctgcgatgggactcgggtgcagcgct 399

                           
Query: 319 gcttgaattgcctggg 334
           ||||||| ||||||||
Sbjct: 400 gcttgaactgcctggg 415
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  153 bits (77), Expect = 1e-33
 Identities = 134/153 (87%)
 Strand = Plus / Plus

                                                                            
Query: 156      cagagaaaattcgcgatgcagtgtggtgcatgcgaggggaagggaacctacgggtgcagg 215
                ||||| |||||||||  || |||||| || |||||||||||||| ||||||| |||||||
Sbjct: 24296571 cagaggaaattcgcggcgccgtgtggcgcctgcgaggggaaggggacctacgcgtgcagg 24296630

                                                                            
Query: 216      ctctgcaggggtagctccacggtcgaatggtctccgctctacgacccggtattcgttaac 275
                ||||||||||| ||||| ||| |||| |||||||||||| |||||||||| ||||| |||
Sbjct: 24296631 ctctgcaggggcagctcgacgatcgagtggtctccgctccacgacccggtgttcgtcaac 24296690

                                                 
Query: 276      ccgtgcatctgccctacttgtgatggtactagg 308
                |||||| |||||||||| ||||| || ||||||
Sbjct: 24296691 ccgtgcctctgccctacctgtgacgggactagg 24296723



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                            
Query: 66       gccgcggcgtacttcggcggcggcttcctcctcctctccacagcatccaccgtcgccgta 125
                |||||||||||| |||||||||||||||||||||||||| | || ||| ||| |||||| 
Sbjct: 24296374 gccgcggcgtacctcggcggcggcttcctcctcctctccgccgcgtcctccgccgccgtc 24296433

                                                 
Query: 126      cgctccctccgctttctctccgataccaaccag 158
                |||||||||||||  ||||||||  ||||||||
Sbjct: 24296434 cgctccctccgctccctctccgacgccaaccag 24296466



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 100     tctccacagcatccaccgtcgcc 122
               |||||||||||||||||||||||
Sbjct: 3292699 tctccacagcatccaccgtcgcc 3292721
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>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0046B10
          Length = 142596

 Score =  153 bits (77), Expect = 1e-33
 Identities = 134/153 (87%)
 Strand = Plus / Plus

                                                                          
Query: 156    cagagaaaattcgcgatgcagtgtggtgcatgcgaggggaagggaacctacgggtgcagg 215
              ||||| |||||||||  || |||||| || |||||||||||||| ||||||| |||||||
Sbjct: 121135 cagaggaaattcgcggcgccgtgtggcgcctgcgaggggaaggggacctacgcgtgcagg 121194

                                                                          
Query: 216    ctctgcaggggtagctccacggtcgaatggtctccgctctacgacccggtattcgttaac 275
              ||||||||||| ||||| ||| |||| |||||||||||| |||||||||| ||||| |||
Sbjct: 121195 ctctgcaggggcagctcgacgatcgagtggtctccgctccacgacccggtgttcgtcaac 121254

                                               
Query: 276    ccgtgcatctgccctacttgtgatggtactagg 308
              |||||| |||||||||| ||||| || ||||||
Sbjct: 121255 ccgtgcctctgccctacctgtgacgggactagg 121287



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                          
Query: 66     gccgcggcgtacttcggcggcggcttcctcctcctctccacagcatccaccgtcgccgta 125
              |||||||||||| |||||||||||||||||||||||||| | || ||| ||| |||||| 
Sbjct: 120938 gccgcggcgtacctcggcggcggcttcctcctcctctccgccgcgtcctccgccgccgtc 120997

                                               
Query: 126    cgctccctccgctttctctccgataccaaccag 158
              |||||||||||||  ||||||||  ||||||||
Sbjct: 120998 cgctccctccgctccctctccgacgccaaccag 121030
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>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E01
          Length = 166753

 Score =  153 bits (77), Expect = 1e-33
 Identities = 134/153 (87%)
 Strand = Plus / Plus

                                                                         
Query: 156   cagagaaaattcgcgatgcagtgtggtgcatgcgaggggaagggaacctacgggtgcagg 215
             ||||| |||||||||  || |||||| || |||||||||||||| ||||||| |||||||
Sbjct: 42475 cagaggaaattcgcggcgccgtgtggcgcctgcgaggggaaggggacctacgcgtgcagg 42534

                                                                         
Query: 216   ctctgcaggggtagctccacggtcgaatggtctccgctctacgacccggtattcgttaac 275
             ||||||||||| ||||| ||| |||| |||||||||||| |||||||||| ||||| |||
Sbjct: 42535 ctctgcaggggcagctcgacgatcgagtggtctccgctccacgacccggtgttcgtcaac 42594

                                              
Query: 276   ccgtgcatctgccctacttgtgatggtactagg 308
             |||||| |||||||||| ||||| || ||||||
Sbjct: 42595 ccgtgcctctgccctacctgtgacgggactagg 42627



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                         
Query: 66    gccgcggcgtacttcggcggcggcttcctcctcctctccacagcatccaccgtcgccgta 125
             |||||||||||| |||||||||||||||||||||||||| | || ||| ||| |||||| 
Sbjct: 42278 gccgcggcgtacctcggcggcggcttcctcctcctctccgccgcgtcctccgccgccgtc 42337

                                              
Query: 126   cgctccctccgctttctctccgataccaaccag 158
             |||||||||||||  ||||||||  ||||||||
Sbjct: 42338 cgctccctccgctccctctccgacgccaaccag 42370
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>emb|CT828634.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA019M15, full
           insert sequence
          Length = 540

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                       
Query: 66  gccgcggcgtacttcggcggcggcttcctcctcctctccacagcatccaccgtcgccgta 125
           |||||||||||| |||||||||||||||||||||||||| | || ||| ||| |||||| 
Sbjct: 281 gccgcggcgtacctcggcggcggcttcctcctcctctccgccgcgtcctccgccgccgtc 222

                                            
Query: 126 cgctccctccgctttctctccgataccaaccag 158
           |||||||||||||  ||||||||  ||||||||
Sbjct: 221 cgctccctccgctccctctccgacgccaaccag 189



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                       
Query: 156 cagagaaaattcgcgatgcagtgtggtgcatgcgaggggaagggaacctacgggtgcagg 215
           ||||| |||||||||  || |||||| || |||||||||||||| ||||||| |||||||
Sbjct: 84  cagaggaaattcgcggcgccgtgtggcgcctgcgaggggaaggggacctacgcgtgcagg 25

                            
Query: 216 ctctgcaggggtagctc 232
           ||||||||||| |||||
Sbjct: 24  ctctgcaggggcagctc 8
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>gb|AC159322.2| Mus musculus BAC clone RP23-33M5 from chromosome 8, complete sequence
          Length = 225520

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 77    cttcggcggcggcttcctcctcctct 102
             ||||||||||||||||||||||||||
Sbjct: 15195 cttcggcggcggcttcctcctcctct 15170
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>gb|AC087183.9| Mus musculus Strain C57BL6/J Chromosome 8 RP23-316J6, complete sequence
          Length = 187359

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 77    cttcggcggcggcttcctcctcctct 102
             ||||||||||||||||||||||||||
Sbjct: 50627 cttcggcggcggcttcctcctcctct 50602
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 19      ccggccgcggcgaccgcgtccggc 42
               ||||||||||||||||||||||||
Sbjct: 4659578 ccggccgcggcgaccgcgtccggc 4659555
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 26      cggcgaccgcgtccggcggcagc 48
               |||||||||||||||||||||||
Sbjct: 3400613 cggcgaccgcgtccggcggcagc 3400635
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>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1189A09
          Length = 167761

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 100    tctccacagcatccaccgtcgcc 122
              |||||||||||||||||||||||
Sbjct: 110328 tctccacagcatccaccgtcgcc 110350
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>gb|AC101872.7| Mus musculus chromosome 17, clone RP23-358C2, complete sequence
          Length = 202465

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 516   gtcctgtttgtgttgagaaact 537
             ||||||||||||||||||||||
Sbjct: 86203 gtcctgtttgtgttgagaaact 86182
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 20     cggccgcggcgaccgcgtccgg 41
              ||||||||||||||||||||||
Sbjct: 709030 cggccgcggcgaccgcgtccgg 709009
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>emb|CT486002.9| Mouse DNA sequence from clone RP23-396G8 on chromosome 17, complete
             sequence
          Length = 220042

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 516   gtcctgtttgtgttgagaaact 537
             ||||||||||||||||||||||
Sbjct: 21499 gtcctgtttgtgttgagaaact 21478
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>ref|NM_001014893.1| Bos taurus btKIAA1539 (KIAA1539), mRNA
 gb|BT021202.1| Bos taurus KIAA1539 (KIAA1539), mRNA, complete cds
          Length = 2594

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 547  ttgatgtttctgaacaaaatg 567
            |||||||||||||||||||||
Sbjct: 1481 ttgatgtttctgaacaaaatg 1501
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>gb|AC113104.15| Mus musculus chromosome 18, clone RP23-321L15, complete sequence
          Length = 207418

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    ggcggcggcttcctcctcctc 101
             |||||||||||||||||||||
Sbjct: 11746 ggcggcggcttcctcctcctc 11726
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>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete
              sequence
          Length = 190055

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 80     cggcggcggcttcctcctcctctcc 104
              ||||| |||||||||||||||||||
Sbjct: 104761 cggcgacggcttcctcctcctctcc 104785
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 35      cgtccggcggcagctccaagc 55
               |||||||||||||||||||||
Sbjct: 1133524 cgtccggcggcagctccaagc 1133504
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>gb|U23523.1| Caenorhabditis elegans cosmid F53A9, complete sequence
          Length = 39626

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 77    cttcggcggcggcttcctcctcctc 101
             ||||||||||||||||||| |||||
Sbjct: 36697 cttcggcggcggcttcctcttcctc 36721
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>gb|AC158975.9| Mus musculus chromosome 18, clone RP24-192J22, complete sequence
          Length = 178651

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    ggcggcggcttcctcctcctc 101
             |||||||||||||||||||||
Sbjct: 22863 ggcggcggcttcctcctcctc 22883
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>dbj|AK147472.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
           full-length enriched library, clone:M5C1049D24
           product:hypothetical Proline-rich region
           profile/Alanine-rich region profile/Arginine-rich region
           profile containing protein, full insert sequence
          Length = 1894

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 81  ggcggcggcttcctcctcctc 101
           |||||||||||||||||||||
Sbjct: 175 ggcggcggcttcctcctcctc 155
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>ref|NM_001029532.1| Caenorhabditis elegans TropoNin T family member (tnt-2) (tnt-2)
           mRNA, complete cds
          Length = 1297

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  cttcggcggcggcttcctcctcctc 101
           ||||||||||||||||||| |||||
Sbjct: 107 cttcggcggcggcttcctcttcctc 83
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>ref|NM_001029533.1| Caenorhabditis elegans TropoNin T family member (tnt-2) (tnt-2)
           mRNA, complete cds
          Length = 1502

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  cttcggcggcggcttcctcctcctc 101
           ||||||||||||||||||| |||||
Sbjct: 107 cttcggcggcggcttcctcttcctc 83
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>gb|AC091487.10| Homo sapiens chromosome 10 clone RP11-478A11, complete sequence
          Length = 215208

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 517  tcctgtttgtgttgagaaact 537
            |||||||||||||||||||||
Sbjct: 8290 tcctgtttgtgttgagaaact 8310
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 80       cggcggcggcttcctcctcctctcc 104
                ||||| |||||||||||||||||||
Sbjct: 21404879 cggcgacggcttcctcctcctctcc 21404903
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>emb|AL357394.11| Human DNA sequence from clone RP11-469B13 on chromosome 10, complete
             sequence
          Length = 185850

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 517   tcctgtttgtgttgagaaact 537
             |||||||||||||||||||||
Sbjct: 29483 tcctgtttgtgttgagaaact 29463
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>dbj|AP004953.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34A24, TM0129,
             complete sequence
          Length = 110487

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 547   ttgatgtttctgaacaaaatg 567
             |||||||||||||||||||||
Sbjct: 51694 ttgatgtttctgaacaaaatg 51714
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 19     ccggccgcggcgaccgcgtccggcg 43
              ||||||||| |||||||||||||||
Sbjct: 530441 ccggccgcgccgaccgcgtccggcg 530417
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>emb|AL928959.9| Mouse DNA sequence from clone RP23-73I19 on chromosome 2, complete
             sequence
          Length = 143937

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    ggcggcttcctcctcctctcc 104
             |||||||||||||||||||||
Sbjct: 76925 ggcggcttcctcctcctctcc 76945
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>gb|U28739.1| Caenorhabditis elegans cosmid C17G10, complete sequence
          Length = 40261

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 471   tgtattttgctcatggaatgt 491
             |||||||||||||||||||||
Sbjct: 39925 tgtattttgctcatggaatgt 39945
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>gb|AF003386.1| Caenorhabditis elegans cosmid F59E12, complete sequence
          Length = 42430

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 471  tgtattttgctcatggaatgt 491
            |||||||||||||||||||||
Sbjct: 4764 tgtattttgctcatggaatgt 4784



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 471   tgtattttgctcatggaatgt 491
             |||||||||||||||||||||
Sbjct: 13226 tgtattttgctcatggaatgt 13246


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 122,930,197
Number of extensions: 7050799
Number of successful extensions: 159730
Number of sequences better than 10.0: 32
Number of HSP's gapped: 159729
Number of HSP's successfully gapped: 38
Length of query: 681
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 659
Effective length of database: 18,508,616,841
Effective search space: 12197178498219
Effective search space used: 12197178498219
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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