ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf111g13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001053193.1| Oryza sativa (japonica cultivar-group) Os02g... 208 4e-50
2dbj|AK072366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 4e-50
3dbj|AK101258.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 1e-47
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 101 7e-18
5dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic D... 101 7e-18
6gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete ... 46 0.34
7emb|CT025671.10| Mouse DNA sequence from clone RP24-358N22 on ch... 46 0.34
8gb|AC119957.9| Mus musculus chromosome 17, clone RP24-466G23, co... 46 0.34
9gb|AC007200.1| Homo sapiens chromosome 5 Bac clone CTB-54K3, com... 46 0.34
10gb|AC140770.1| Homo sapiens chromosome 5 clone RP11-78J4, comple... 46 0.34
11ref|XM_001070646.1| PREDICTED: Rattus norvegicus DEAD/H (Asp-Glu... 44 1.3
12ref|XM_237570.4| PREDICTED: Rattus norvegicus DEAD/H (Asp-Glu-Al... 44 1.3
13gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 44 1.3
14gb|BC049929.1| Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) box pol... 44 1.3
15ref|NM_001003919.1| Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) bo... 44 1.3
16dbj|AK152868.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 44 1.3
17dbj|AK049419.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 44 1.3
18dbj|AK076357.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 44 1.3
19ref|XM_001026984.1| Tetrahymena thermophila SB210 Beige/BEACH do... 42 5.3
20ref|XM_001197759.1| PREDICTED: Strongylocentrotus purpuratus sim... 42 5.3
21ref|XM_001196394.1| PREDICTED: Strongylocentrotus purpuratus sim... 42 5.3
22gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete ... 42 5.3
23emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 42 5.3
24emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 5.3
25gb|DQ493943.1| Magnaporthe grisea 70-15 clone 72H05 telomere reg... 42 5.3
26gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 5.3
27gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 5.3
28gb|AC134537.3| Mus musculus BAC clone RP24-388M1 from chromosome... 42 5.3
29gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 5.3
30gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 5.3
31gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, compl... 42 5.3
32gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 5.3
33gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, co... 42 5.3
34dbj|AB158488.1| Sus scrofa TRIM39, FLJ22638, GNL1, CAT56 genes, ... 42 5.3
35ref|NM_001008423.1| Mus musculus gene model 1568, (NCBI) (Gm1568... 42 5.3
36gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 5.3
37dbj|AK147473.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 42 5.3
38emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete ch... 42 5.3
39emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chrom... 42 5.3
40dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 5.3
41dbj|AB197125.1| Burkholderia multivorans genes for GrpE, putativ... 42 5.3
42emb|Z73967.1|HS315B17 Human DNA sequence from clone RP1-315B17 o... 42 5.3
43emb|AL392185.10| Human DNA sequence from clone RP11-332M4 on chr... 42 5.3
44emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 5.3
45emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 42 5.3

>ref|NM_001053193.1| Oryza sativa (japonica cultivar-group) Os02g0313700 (Os02g0313700)
            mRNA, complete cds
          Length = 2555
 Score =  208 bits (105), Expect = 4e-50
 Identities = 237/281 (84%)
 Strand = Plus / Plus

                                                                        
Query: 39   caatcttctttctcttcaagttcgagacaaggaccacatctttgatgacccacttggaaa 98
            ||||||||| ||||||||||||||||| ||||| | ||||||||| ||| |||| ||  |
Sbjct: 1161 caatcttctctctcttcaagttcgagataaggatcccatctttgacgacacactcggtga 1220

                                                                        
Query: 99   ctgttcaatcagcatcaacaagctgagaggaggacaaagacacgatatgtggattccact 158
            |||||| || |||||||||||  ||||||| |||||||| ||||| || |||||| | ||
Sbjct: 1221 ctgttccataagcatcaacaaattgagaggtggacaaaggcacgacatatggattgctct 1280

                                                                        
Query: 159  aaagcatataaagacagggagggttcatatagctgtgacggtacttgaagatgaaaacgg 218
             ||| |||||||||||||| || |||||||||| || || ||||||||||||||||| | 
Sbjct: 1281 gaagaatataaagacagggcggattcatatagcagtaacagtacttgaagatgaaaatga 1340

                                                                        
Query: 219  aaaggtacctagcgacgaagatgaagtgtgtggaacacccaaggaggggaaagctagcac 278
            |||||| || | ||| || |||||   ||||||||||||||||| ||| ||||| |||||
Sbjct: 1341 aaaggttccaaacgatgacgatgagcagtgtggaacacccaaggggggtaaagcaagcac 1400

                                                     
Query: 279  accaagttctagtttttcttccaggaccaacaccgaaagtg 319
            |||||| ||||| ||||| |||||||||||||  |||||||
Sbjct: 1401 accaaggtctagcttttcgtccaggaccaacaatgaaagtg 1441



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 82/97 (84%), Gaps = 3/97 (3%)
 Strand = Plus / Plus

                                                                        
Query: 851  tgaggaagaaggcggcgcacatggtgaaacacgcgggg---aaagccgctcataacctga 907
            ||||||||||||| | ||||||||||||||| ||||||   ||| | |||||||| ||||
Sbjct: 1946 tgaggaagaaggctgtgcacatggtgaaacatgcggggaacaaaacagctcataatctga 2005

                                                 
Query: 908  agagcatgctcagcaggaagggccttgacaagggcaa 944
            ||| |||| |||||||||| |||  ||||||| ||||
Sbjct: 2006 agaacatgttcagcaggaaaggcagtgacaagagcaa 2042



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 111/138 (80%)
 Strand = Plus / Plus

                                                                        
Query: 351  tgaatatgaacctgtggacatcaaaggactggaaaaggctggtgtctgggtacaccggcc 410
            ||||||||| || || |||||  ||||||||||||||| || ||| ||||| || |||||
Sbjct: 1473 tgaatatgagccagtagacattgaaggactggaaaaggttgatgtttgggtccatcggcc 1532

                                                                        
Query: 411  gggcagcgacgtcgccgctacctgggagcctcggaaggggcgagcgcggtgccaggactc 470
             ||||| || ||||| |  || |||||||||||||| || || ||| |||| ||||| ||
Sbjct: 1533 aggcagtgatgtcgcagtcacttgggagcctcggaaaggacgtgcgaggtgtcaggattc 1592

                              
Query: 471  ccaaatactacgggagaa 488
            |  ||| ||||| |||||
Sbjct: 1593 cagaatcctacgagagaa 1610



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>dbj|AK072366.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063O05, full
            insert sequence
          Length = 3224

 Score =  208 bits (105), Expect = 4e-50
 Identities = 237/281 (84%)
 Strand = Plus / Plus

                                                                        
Query: 39   caatcttctttctcttcaagttcgagacaaggaccacatctttgatgacccacttggaaa 98
            ||||||||| ||||||||||||||||| ||||| | ||||||||| ||| |||| ||  |
Sbjct: 2739 caatcttctctctcttcaagttcgagataaggatcccatctttgacgacacactcggtga 2798

                                                                        
Query: 99   ctgttcaatcagcatcaacaagctgagaggaggacaaagacacgatatgtggattccact 158
            |||||| || |||||||||||  ||||||| |||||||| ||||| || |||||| | ||
Sbjct: 2799 ctgttccataagcatcaacaaattgagaggtggacaaaggcacgacatatggattgctct 2858

                                                                        
Query: 159  aaagcatataaagacagggagggttcatatagctgtgacggtacttgaagatgaaaacgg 218
             ||| |||||||||||||| || |||||||||| || || ||||||||||||||||| | 
Sbjct: 2859 gaagaatataaagacagggcggattcatatagcagtaacagtacttgaagatgaaaatga 2918

                                                                        
Query: 219  aaaggtacctagcgacgaagatgaagtgtgtggaacacccaaggaggggaaagctagcac 278
            |||||| || | ||| || |||||   ||||||||||||||||| ||| ||||| |||||
Sbjct: 2919 aaaggttccaaacgatgacgatgagcagtgtggaacacccaaggggggtaaagcaagcac 2978

                                                     
Query: 279  accaagttctagtttttcttccaggaccaacaccgaaagtg 319
            |||||| ||||| ||||| |||||||||||||  |||||||
Sbjct: 2979 accaaggtctagcttttcgtccaggaccaacaatgaaagtg 3019



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 111/138 (80%)
 Strand = Plus / Plus

                                                                        
Query: 351  tgaatatgaacctgtggacatcaaaggactggaaaaggctggtgtctgggtacaccggcc 410
            ||||||||| || || |||||  ||||||||||||||| || ||| ||||| || |||||
Sbjct: 3051 tgaatatgagccagtagacattgaaggactggaaaaggttgatgtttgggtccatcggcc 3110

                                                                        
Query: 411  gggcagcgacgtcgccgctacctgggagcctcggaaggggcgagcgcggtgccaggactc 470
             ||||| || ||||| |  || |||||||||||||| || || ||| |||| ||||| ||
Sbjct: 3111 aggcagtgatgtcgcagtcacttgggagcctcggaaaggacgtgcgaggtgtcaggattc 3170

                              
Query: 471  ccaaatactacgggagaa 488
            |  ||| ||||| |||||
Sbjct: 3171 cagaatcctacgagagaa 3188



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>dbj|AK101258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032H14, full
            insert sequence
          Length = 2557

 Score =  200 bits (101), Expect = 1e-47
 Identities = 236/281 (83%)
 Strand = Plus / Plus

                                                                        
Query: 39   caatcttctttctcttcaagttcgagacaaggaccacatctttgatgacccacttggaaa 98
            ||||||||| ||||||||||||||||| ||||| | ||||||||| ||| |||| ||  |
Sbjct: 1163 caatcttctctctcttcaagttcgagataaggatcccatctttgacgacacactcggtga 1222

                                                                        
Query: 99   ctgttcaatcagcatcaacaagctgagaggaggacaaagacacgatatgtggattccact 158
            |||||| || |||||||||||  |||||||  ||||||| ||||| || |||||| | ||
Sbjct: 1223 ctgttccataagcatcaacaaattgagaggtagacaaaggcacgacatatggattgctct 1282

                                                                        
Query: 159  aaagcatataaagacagggagggttcatatagctgtgacggtacttgaagatgaaaacgg 218
             ||| |||||||||||||| || |||||||||| || || ||||||||||||||||| | 
Sbjct: 1283 gaagaatataaagacagggcggattcatatagcagtaacagtacttgaagatgaaaatga 1342

                                                                        
Query: 219  aaaggtacctagcgacgaagatgaagtgtgtggaacacccaaggaggggaaagctagcac 278
            |||||| || | ||| || |||||   ||||||||||||||||| ||| ||||| |||||
Sbjct: 1343 aaaggttccaaacgatgacgatgagcagtgtggaacacccaaggggggtaaagcaagcac 1402

                                                     
Query: 279  accaagttctagtttttcttccaggaccaacaccgaaagtg 319
            |||||| ||||| ||||| |||||||||||||  |||||||
Sbjct: 1403 accaaggtctagcttttcgtccaggaccaacaatgaaagtg 1443



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 82/97 (84%), Gaps = 3/97 (3%)
 Strand = Plus / Plus

                                                                        
Query: 851  tgaggaagaaggcggcgcacatggtgaaacacgcgggg---aaagccgctcataacctga 907
            ||||||||||||| | ||||||||||||||| ||||||   ||| | |||||||| ||||
Sbjct: 1948 tgaggaagaaggctgtgcacatggtgaaacatgcggggaacaaaacagctcataatctga 2007

                                                 
Query: 908  agagcatgctcagcaggaagggccttgacaagggcaa 944
            ||| |||| |||||||||| |||  ||||||| ||||
Sbjct: 2008 agaacatgttcagcaggaaaggcagtgacaagagcaa 2044



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 111/138 (80%)
 Strand = Plus / Plus

                                                                        
Query: 351  tgaatatgaacctgtggacatcaaaggactggaaaaggctggtgtctgggtacaccggcc 410
            ||||||||| || || |||||  ||||||||||||||| || ||| ||||| || |||||
Sbjct: 1475 tgaatatgagccagtagacattgaaggactggaaaaggttgatgtttgggtccatcggcc 1534

                                                                        
Query: 411  gggcagcgacgtcgccgctacctgggagcctcggaaggggcgagcgcggtgccaggactc 470
             ||||| || ||||| |  || |||||||||||||| || || ||| |||| ||||| ||
Sbjct: 1535 aggcagtgatgtcgcagtcacttgggagcctcggaaaggacgtgcgaggtgtcaggattc 1594

                              
Query: 471  ccaaatactacgggagaa 488
            |  ||| ||||| |||||
Sbjct: 1595 cagaatcctacgagagaa 1612



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  101 bits (51), Expect = 7e-18
 Identities = 108/127 (85%)
 Strand = Plus / Minus

                                                                            
Query: 98       actgttcaatcagcatcaacaagctgagaggaggacaaagacacgatatgtggattccac 157
                ||||||| || |||||||||||  ||||||| |||||||| ||||| || |||||| | |
Sbjct: 12398817 actgttccataagcatcaacaaattgagaggtggacaaaggcacgacatatggattgctc 12398758

                                                                            
Query: 158      taaagcatataaagacagggagggttcatatagctgtgacggtacttgaagatgaaaacg 217
                | ||| |||||||||||||| || |||||||||| || || ||||||||||||||||| |
Sbjct: 12398757 tgaagaatataaagacagggcggattcatatagcagtaacagtacttgaagatgaaaatg 12398698

                       
Query: 218      gaaaggt 224
                 ||||||
Sbjct: 12398697 aaaaggt 12398691



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                            
Query: 246      gtgtggaacacccaaggaggggaaagctagcacaccaagttctagtttttcttccaggac 305
                ||||||||||||||||| ||| ||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 12398429 gtgtggaacacccaaggggggtaaagcaagcacaccaaggtctagcttttcgtccaggac 12398370

                              
Query: 306      caacaccgaaagtg 319
                |||||  |||||||
Sbjct: 12398369 caacaatgaaagtg 12398356



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 82/97 (84%), Gaps = 3/97 (3%)
 Strand = Plus / Minus

                                                                            
Query: 851      tgaggaagaaggcggcgcacatggtgaaacacgcgggg---aaagccgctcataacctga 907
                ||||||||||||| | ||||||||||||||| ||||||   ||| | |||||||| ||||
Sbjct: 12397851 tgaggaagaaggctgtgcacatggtgaaacatgcggggaacaaaacagctcataatctga 12397792

                                                     
Query: 908      agagcatgctcagcaggaagggccttgacaagggcaa 944
                ||| |||| |||||||||| |||  ||||||| ||||
Sbjct: 12397791 agaacatgttcagcaggaaaggcagtgacaagagcaa 12397755



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 111/138 (80%)
 Strand = Plus / Minus

                                                                            
Query: 351      tgaatatgaacctgtggacatcaaaggactggaaaaggctggtgtctgggtacaccggcc 410
                ||||||||| || || |||||  ||||||||||||||| || ||| ||||| || |||||
Sbjct: 12398324 tgaatatgagccagtagacattgaaggactggaaaaggttgatgtttgggtccatcggcc 12398265

                                                                            
Query: 411      gggcagcgacgtcgccgctacctgggagcctcggaaggggcgagcgcggtgccaggactc 470
                 ||||| || ||||| |  || |||||||||||||| || || ||| |||| ||||| ||
Sbjct: 12398264 aggcagtgatgtcgcagtcacttgggagcctcggaaaggacgtgcgaggtgtcaggattc 12398205

                                  
Query: 471      ccaaatactacgggagaa 488
                |  ||| ||||| |||||
Sbjct: 12398204 cagaatcctacgagagaa 12398187



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 39       caatcttctttctcttcaagttcgagacaaggaccacatctttgatgacccact 92
                ||||||||| ||||||||||||||||| ||||| | ||||||||| ||| ||||
Sbjct: 12399027 caatcttctctctcttcaagttcgagataaggatcccatctttgacgacacact 12398974



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>dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0705A04
          Length = 182468

 Score =  101 bits (51), Expect = 7e-18
 Identities = 108/127 (85%)
 Strand = Plus / Minus

                                                                         
Query: 98    actgttcaatcagcatcaacaagctgagaggaggacaaagacacgatatgtggattccac 157
             ||||||| || |||||||||||  ||||||| |||||||| ||||| || |||||| | |
Sbjct: 78954 actgttccataagcatcaacaaattgagaggtggacaaaggcacgacatatggattgctc 78895

                                                                         
Query: 158   taaagcatataaagacagggagggttcatatagctgtgacggtacttgaagatgaaaacg 217
             | ||| |||||||||||||| || |||||||||| || || ||||||||||||||||| |
Sbjct: 78894 tgaagaatataaagacagggcggattcatatagcagtaacagtacttgaagatgaaaatg 78835

                    
Query: 218   gaaaggt 224
              ||||||
Sbjct: 78834 aaaaggt 78828



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 246   gtgtggaacacccaaggaggggaaagctagcacaccaagttctagtttttcttccaggac 305
             ||||||||||||||||| ||| ||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 78566 gtgtggaacacccaaggggggtaaagcaagcacaccaaggtctagcttttcgtccaggac 78507

                           
Query: 306   caacaccgaaagtg 319
             |||||  |||||||
Sbjct: 78506 caacaatgaaagtg 78493



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 82/97 (84%), Gaps = 3/97 (3%)
 Strand = Plus / Minus

                                                                         
Query: 851   tgaggaagaaggcggcgcacatggtgaaacacgcgggg---aaagccgctcataacctga 907
             ||||||||||||| | ||||||||||||||| ||||||   ||| | |||||||| ||||
Sbjct: 77988 tgaggaagaaggctgtgcacatggtgaaacatgcggggaacaaaacagctcataatctga 77929

                                                  
Query: 908   agagcatgctcagcaggaagggccttgacaagggcaa 944
             ||| |||| |||||||||| |||  ||||||| ||||
Sbjct: 77928 agaacatgttcagcaggaaaggcagtgacaagagcaa 77892



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 111/138 (80%)
 Strand = Plus / Minus

                                                                         
Query: 351   tgaatatgaacctgtggacatcaaaggactggaaaaggctggtgtctgggtacaccggcc 410
             ||||||||| || || |||||  ||||||||||||||| || ||| ||||| || |||||
Sbjct: 78461 tgaatatgagccagtagacattgaaggactggaaaaggttgatgtttgggtccatcggcc 78402

                                                                         
Query: 411   gggcagcgacgtcgccgctacctgggagcctcggaaggggcgagcgcggtgccaggactc 470
              ||||| || ||||| |  || |||||||||||||| || || ||| |||| ||||| ||
Sbjct: 78401 aggcagtgatgtcgcagtcacttgggagcctcggaaaggacgtgcgaggtgtcaggattc 78342

                               
Query: 471   ccaaatactacgggagaa 488
             |  ||| ||||| |||||
Sbjct: 78341 cagaatcctacgagagaa 78324



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 39    caatcttctttctcttcaagttcgagacaaggaccacatctttgatgacccact 92
             ||||||||| ||||||||||||||||| ||||| | ||||||||| ||| ||||
Sbjct: 79164 caatcttctctctcttcaagttcgagataaggatcccatctttgacgacacact 79111



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>gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete sequence
          Length = 2646969

 Score = 46.1 bits (23), Expect = 0.34
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 969     ggaggaagacgatctcgatgcgg 991
               |||||||||||||||||||||||
Sbjct: 2281594 ggaggaagacgatctcgatgcgg 2281572



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>emb|CT025671.10| Mouse DNA sequence from clone RP24-358N22 on chromosome 17, complete
            sequence
          Length = 114374

 Score = 46.1 bits (23), Expect = 0.34
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 906  gaagagcatgctcagcaggaagg 928
            |||||||||||||||||||||||
Sbjct: 8632 gaagagcatgctcagcaggaagg 8654



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>gb|AC119957.9| Mus musculus chromosome 17, clone RP24-466G23, complete sequence
          Length = 153209

 Score = 46.1 bits (23), Expect = 0.34
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 906 gaagagcatgctcagcaggaagg 928
           |||||||||||||||||||||||
Sbjct: 176 gaagagcatgctcagcaggaagg 154



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>gb|AC007200.1| Homo sapiens chromosome 5 Bac clone CTB-54K3, complete sequence
          Length = 99670

 Score = 46.1 bits (23), Expect = 0.34
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 1337  tgcgtaaaatgaaaatatatatg 1359
             |||||||||||||||||||||||
Sbjct: 70580 tgcgtaaaatgaaaatatatatg 70558



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>gb|AC140770.1| Homo sapiens chromosome 5 clone RP11-78J4, complete sequence
          Length = 156513

 Score = 46.1 bits (23), Expect = 0.34
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 1337   tgcgtaaaatgaaaatatatatg 1359
              |||||||||||||||||||||||
Sbjct: 106697 tgcgtaaaatgaaaatatatatg 106719



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>ref|XM_001070646.1| PREDICTED: Rattus norvegicus DEAD/H (Asp-Glu-Ala-Asp/His) box
            polypeptide 11 (CHL1-like helicase homolog, S.
            cerevisiae) (predicted) (Ddx11_predicted), mRNA
          Length = 4831

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 906  gaagagcatgctcagcaggaag 927
            ||||||||||||||||||||||
Sbjct: 1419 gaagagcatgctcagcaggaag 1440



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>ref|XM_237570.4| PREDICTED: Rattus norvegicus DEAD/H (Asp-Glu-Ala-Asp/His) box
            polypeptide 11 (CHL1-like helicase homolog, S.
            cerevisiae) (predicted) (Ddx11_predicted), mRNA
          Length = 4912

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 906  gaagagcatgctcagcaggaag 927
            ||||||||||||||||||||||
Sbjct: 1482 gaagagcatgctcagcaggaag 1503



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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 408     gccgggcagcgacgtcgccgct 429
               ||||||||||||||||||||||
Sbjct: 2627643 gccgggcagcgacgtcgccgct 2627664



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>gb|BC049929.1| Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
           (CHL1-like helicase homolog, S. cerevisiae), mRNA (cDNA
           clone IMAGE:5309846), partial cds
          Length = 1971

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 906 gaagagcatgctcagcaggaag 927
           ||||||||||||||||||||||
Sbjct: 104 gaagagcatgctcagcaggaag 125



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>ref|NM_001003919.1| Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
            (CHL1-like helicase homolog, S. cerevisiae) (Ddx11), mRNA
 gb|BC079656.1| Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
            (CHL1-like helicase homolog, S. cerevisiae), mRNA (cDNA
            clone MGC:90809 IMAGE:6854039), complete cds
          Length = 4167

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 906  gaagagcatgctcagcaggaag 927
            ||||||||||||||||||||||
Sbjct: 1590 gaagagcatgctcagcaggaag 1611



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>dbj|AK152868.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830087P18 product:similar to DDX11
            protein [Homo sapiens], full insert sequence
          Length = 3420

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 906  gaagagcatgctcagcaggaag 927
            ||||||||||||||||||||||
Sbjct: 1578 gaagagcatgctcagcaggaag 1599



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>dbj|AK049419.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:C430005N23 product:similar to
            CHL1 POTENTIAL HELICASE [Homo sapiens], full insert
            sequence
          Length = 3523

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 906  gaagagcatgctcagcaggaag 927
            ||||||||||||||||||||||
Sbjct: 1596 gaagagcatgctcagcaggaag 1617



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>dbj|AK076357.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732462I11 product:weakly similar to
            HELICASE [Homo sapiens], full insert sequence
          Length = 4486

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 906  gaagagcatgctcagcaggaag 927
            ||||||||||||||||||||||
Sbjct: 1620 gaagagcatgctcagcaggaag 1641



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>ref|XM_001026984.1| Tetrahymena thermophila SB210 Beige/BEACH domain containing protein
            (TTHERM_00688820) mRNA, complete cds
          Length = 10635

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   cttctttctcttcaagttcga 63
            |||||||||||||||||||||
Sbjct: 9412 cttctttctcttcaagttcga 9392



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>ref|XM_001197759.1| PREDICTED: Strongylocentrotus purpuratus similar to 13S condensin
            XCAP-D2 subunit (LOC757264), partial mRNA
          Length = 1847

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 962  acgaggaggaggaagacgatc 982
            |||||||||||||||||||||
Sbjct: 1501 acgaggaggaggaagacgatc 1521



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>ref|XM_001196394.1| PREDICTED: Strongylocentrotus purpuratus similar to 13S condensin
            XCAP-D2 subunit (LOC765457), partial mRNA
          Length = 1847

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 962  acgaggaggaggaagacgatc 982
            |||||||||||||||||||||
Sbjct: 1501 acgaggaggaggaagacgatc 1521



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>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence
          Length = 3556545

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 652    aagaacgcgagcgacgacgaa 672
              |||||||||||||||||||||
Sbjct: 728409 aagaacgcgagcgacgacgaa 728429



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>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1
          Length = 4052032

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 651     caagaacgcgagcgacgacga 671
               |||||||||||||||||||||
Sbjct: 3342626 caagaacgcgagcgacgacga 3342606



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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 651     caagaacgcgagcgacgacga 671
               |||||||||||||||||||||
Sbjct: 2837833 caagaacgcgagcgacgacga 2837813



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>gb|DQ493943.1| Magnaporthe grisea 70-15 clone 72H05 telomere region, partial sequence
          Length = 45496

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 956   ggagaaacgaggaggaggaagacga 980
             ||||| |||||||||||||||||||
Sbjct: 25540 ggagagacgaggaggaggaagacga 25516



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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 651     caagaacgcgagcgacgacga 671
               |||||||||||||||||||||
Sbjct: 3176368 caagaacgcgagcgacgacga 3176348



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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 652    aagaacgcgagcgacgacgaa 672
              |||||||||||||||||||||
Sbjct: 567370 aagaacgcgagcgacgacgaa 567390



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>gb|AC134537.3| Mus musculus BAC clone RP24-388M1 from chromosome 12, complete sequence
          Length = 221662

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 481    cgggagaacgacggctgcagc 501
              |||||||||||||||||||||
Sbjct: 192038 cgggagaacgacggctgcagc 192018



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 652     aagaacgcgagcgacgacgaa 672
               |||||||||||||||||||||
Sbjct: 2421859 aagaacgcgagcgacgacgaa 2421839



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 652     aagaacgcgagcgacgacgaa 672
               |||||||||||||||||||||
Sbjct: 3637005 aagaacgcgagcgacgacgaa 3636985



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>gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, complete sequence
          Length = 209066

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 481   cgggagaacgacggctgcagc 501
             |||||||||||||||||||||
Sbjct: 22066 cgggagaacgacggctgcagc 22046



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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 651     caagaacgcgagcgacgacga 671
               |||||||||||||||||||||
Sbjct: 3053981 caagaacgcgagcgacgacga 3053961



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>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence
          Length = 167588

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 37    tccaatcttctttctcttcaagttc 61
             ||||||||||||||| |||||||||
Sbjct: 19408 tccaatcttctttctgttcaagttc 19384



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>dbj|AB158488.1| Sus scrofa TRIM39, FLJ22638, GNL1, CAT56 genes, SLA-11 pseudogene,
              complete cds
          Length = 147386

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 632    tgcgccacaacaagaactcca 652
              |||||||||||||||||||||
Sbjct: 121772 tgcgccacaacaagaactcca 121792



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>ref|NM_001008423.1| Mus musculus gene model 1568, (NCBI) (Gm1568), mRNA
 gb|BC067044.1| Mus musculus gene model 1568, (NCBI), mRNA (cDNA clone MGC:91363
            IMAGE:30531780), complete cds
          Length = 4032

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 481  cgggagaacgacggctgcagc 501
            |||||||||||||||||||||
Sbjct: 2088 cgggagaacgacggctgcagc 2108



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>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0011G21, from chromosome 3, complete sequence
          Length = 142401

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 37    tccaatcttctttctcttcaagttc 61
             ||||||||||||||| |||||||||
Sbjct: 27068 tccaatcttctttctgttcaagttc 27092



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>dbj|AK147473.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
            full-length enriched library, clone:M5C1049E04
            product:hypothetical Glutamic acid-rich region
            profile/Arginine-rich region profile/Serine-rich region
            profile containing protein, full insert sequence
          Length = 5628

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 481  cgggagaacgacggctgcagc 501
            |||||||||||||||||||||
Sbjct: 1943 cgggagaacgacggctgcagc 1963



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>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12
          Length = 306250

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 916    ctcagcaggaagggccttgac 936
              |||||||||||||||||||||
Sbjct: 242316 ctcagcaggaagggccttgac 242336



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>emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chromosome 6, complete
              sequence
          Length = 186091

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 632    tgcgccacaacaagaactccaagaa 656
              |||||||| ||||||||||||||||
Sbjct: 112295 tgcgccactacaagaactccaagaa 112319



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 37       tccaatcttctttctcttcaagttc 61
                ||||||||||||||| |||||||||
Sbjct: 11110474 tccaatcttctttctgttcaagttc 11110498



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>dbj|AB197125.1| Burkholderia multivorans genes for GrpE, putative thioredoxin, DnaK,
            DnaJ, para-aminobenzoate synthetase component, complete
            and partial cds
          Length = 5596

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 652  aagaacgcgagcgacgacgaa 672
            |||||||||||||||||||||
Sbjct: 3598 aagaacgcgagcgacgacgaa 3618



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>emb|Z73967.1|HS315B17 Human DNA sequence from clone RP1-315B17 on chromosome Xq22.2-22.3,
             complete sequence
          Length = 53185

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    atccaatcttctttctcttca 56
             |||||||||||||||||||||
Sbjct: 21409 atccaatcttctttctcttca 21429



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>emb|AL392185.10| Human DNA sequence from clone RP11-332M4 on chromosome 9 Contain a
             novel gene, complete sequence
          Length = 69582

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   aaagcatataaagacagggagggtt 183
             |||| ||||||||||||||||||||
Sbjct: 22945 aaaggatataaagacagggagggtt 22921



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 652     aagaacgcgagcgacgacgaa 672
               |||||||||||||||||||||
Sbjct: 3379713 aagaacgcgagcgacgacgaa 3379693



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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 42.1 bits (21), Expect = 5.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 435    ggagcctcggaaggggcgagcgcgg 459
              |||||||||||||| ||||||||||
Sbjct: 243366 ggagcctcggaaggcgcgagcgcgg 243390


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 233,037,908
Number of extensions: 13403279
Number of successful extensions: 308260
Number of sequences better than 10.0: 45
Number of HSP's gapped: 308260
Number of HSP's successfully gapped: 58
Length of query: 1385
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1362
Effective length of database: 18,503,978,556
Effective search space: 25202418793272
Effective search space used: 25202418793272
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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