ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf114c04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001074702.1| Oryza sativa (japonica cultivar-group) Os11g0586900 (Os11g0586900) mRNA, complete cds Length = 957 Score = 607 bits (306), Expect = e-170 Identities = 495/558 (88%) Strand = Plus / Plus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 |||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||| Sbjct: 131 gatgggggcgtggatgtcgcgggtgtggttcttgatgttcccggcgaaggagtacaagat 190 Query: 193 cgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcgg 252 ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 191 cgtcgtcgtggggctcgacaacgccggcaagaccaccacgctctacaagctccacctcgg 250 Query: 253 cgaggcggtcaccgccgcgcccaccatcggcagtaacgtcgaggaggtcgtcttcaagaa 312 ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 251 ggaggccgtcaccgccgcacccaccatcggcagcaacgtcgaggaggtcgtcttcaagaa 310 Query: 313 tatacgcttcgaggtgtgggatctaggaggacaagagagcctacgcacttcatgggcgac 372 || || ||||||||||||||| |||||||||||||||| ||||| ||||| ||||| || Sbjct: 311 catccgattcgaggtgtgggatttaggaggacaagagagtctacggacttcgtgggcaac 370 Query: 373 atactatagaggaactcacgctgtcatcgtggtaatcgacagcaccgaccgttctcggat 432 |||||| |||||||| || ||||||||||| ||||| |||||||| |||||| ||||||| Sbjct: 371 atactacagaggaacccatgctgtcatcgttgtaattgacagcacagaccgtgctcggat 430 Query: 433 caacatcattaaggatgagctcttccggttgattcagcatgcagaccttgacaacacggc 492 |||||| || |||||||||||||||||| || ||||||||| ||||| || | | | Sbjct: 431 caacattatcaaggatgagctcttccggctgcttcagcatggggacctcgagggcgcagt 490 Query: 493 ggtcctcgtgtttgcgaacaagcaggatctcaaggatgccatgtcggcggctgagatcac 552 ||||||||||| || |||||||||||||||||||| ||||||||| | ||||||||||| Sbjct: 491 agtcctcgtgttcgcaaacaagcaggatctcaaggacgccatgtcgccagctgagatcac 550 Query: 553 ggacgccctgtccctccacagcataaagaaccgcgactggcacatacaggcctcgtgcgc 612 ||||| || |||||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 551 cgacgctctctccctccacagcataaagaaccacgattggcacatacaggcctcatgcgc 610 Query: 613 cctcactggtgagggcctctatgatgggatgggctggatagctcagaaagttgccggaaa 672 |||| |||||||||||||| || ||| | |||||||||||||||||||| ||||| || Sbjct: 611 gatcaccggtgagggcctctacgacgggctcggctggatagctcagaaagtcgccggcaa 670 Query: 673 ggccacggcaagctgacc 690 |||||| |||||||||| Sbjct: 671 ggccacaacaagctgacc 688
>dbj|AK071632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104M08, full insert sequence Length = 958 Score = 607 bits (306), Expect = e-170 Identities = 495/558 (88%) Strand = Plus / Plus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 |||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||| Sbjct: 132 gatgggggcgtggatgtcgcgggtgtggttcttgatgttcccggcgaaggagtacaagat 191 Query: 193 cgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcgg 252 ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 192 cgtcgtcgtggggctcgacaacgccggcaagaccaccacgctctacaagctccacctcgg 251 Query: 253 cgaggcggtcaccgccgcgcccaccatcggcagtaacgtcgaggaggtcgtcttcaagaa 312 ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 252 ggaggccgtcaccgccgcacccaccatcggcagcaacgtcgaggaggtcgtcttcaagaa 311 Query: 313 tatacgcttcgaggtgtgggatctaggaggacaagagagcctacgcacttcatgggcgac 372 || || ||||||||||||||| |||||||||||||||| ||||| ||||| ||||| || Sbjct: 312 catccgattcgaggtgtgggatttaggaggacaagagagtctacggacttcgtgggcaac 371 Query: 373 atactatagaggaactcacgctgtcatcgtggtaatcgacagcaccgaccgttctcggat 432 |||||| |||||||| || ||||||||||| ||||| |||||||| |||||| ||||||| Sbjct: 372 atactacagaggaacccatgctgtcatcgttgtaattgacagcacagaccgtgctcggat 431 Query: 433 caacatcattaaggatgagctcttccggttgattcagcatgcagaccttgacaacacggc 492 |||||| || |||||||||||||||||| || ||||||||| ||||| || | | | Sbjct: 432 caacattatcaaggatgagctcttccggctgcttcagcatggggacctcgagggcgcagt 491 Query: 493 ggtcctcgtgtttgcgaacaagcaggatctcaaggatgccatgtcggcggctgagatcac 552 ||||||||||| || |||||||||||||||||||| ||||||||| | ||||||||||| Sbjct: 492 agtcctcgtgttcgcaaacaagcaggatctcaaggacgccatgtcgccagctgagatcac 551 Query: 553 ggacgccctgtccctccacagcataaagaaccgcgactggcacatacaggcctcgtgcgc 612 ||||| || |||||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 552 cgacgctctctccctccacagcataaagaaccacgattggcacatacaggcctcatgcgc 611 Query: 613 cctcactggtgagggcctctatgatgggatgggctggatagctcagaaagttgccggaaa 672 |||| |||||||||||||| || ||| | |||||||||||||||||||| ||||| || Sbjct: 612 gatcaccggtgagggcctctacgacgggctcggctggatagctcagaaagtcgccggcaa 671 Query: 673 ggccacggcaagctgacc 690 |||||| |||||||||| Sbjct: 672 ggccacaacaagctgacc 689
>dbj|AK058229.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-A04, full insert sequence Length = 940 Score = 607 bits (306), Expect = e-170 Identities = 495/558 (88%) Strand = Plus / Plus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 |||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||| Sbjct: 219 gatgggggcgtggatgtcgcgggtgtggttcttgatgttcccggcgaaggagtacaagat 278 Query: 193 cgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcgg 252 ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 279 cgtcgtcgtggggctcgacaacgccggcaagaccaccacgctctacaagctccacctcgg 338 Query: 253 cgaggcggtcaccgccgcgcccaccatcggcagtaacgtcgaggaggtcgtcttcaagaa 312 ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 339 ggaggccgtcaccgccgcacccaccatcggcagcaacgtcgaggaggtcgtcttcaagaa 398 Query: 313 tatacgcttcgaggtgtgggatctaggaggacaagagagcctacgcacttcatgggcgac 372 || || ||||||||||||||| |||||||||||||||| ||||| ||||| ||||| || Sbjct: 399 catccgattcgaggtgtgggatttaggaggacaagagagtctacggacttcgtgggcaac 458 Query: 373 atactatagaggaactcacgctgtcatcgtggtaatcgacagcaccgaccgttctcggat 432 |||||| |||||||| || ||||||||||| ||||| |||||||| |||||| ||||||| Sbjct: 459 atactacagaggaacccatgctgtcatcgttgtaattgacagcacagaccgtgctcggat 518 Query: 433 caacatcattaaggatgagctcttccggttgattcagcatgcagaccttgacaacacggc 492 |||||| || |||||||||||||||||| || ||||||||| ||||| || | | | Sbjct: 519 caacattatcaaggatgagctcttccggctgcttcagcatggggacctcgagggcgcagt 578 Query: 493 ggtcctcgtgtttgcgaacaagcaggatctcaaggatgccatgtcggcggctgagatcac 552 ||||||||||| || |||||||||||||||||||| ||||||||| | ||||||||||| Sbjct: 579 agtcctcgtgttcgcaaacaagcaggatctcaaggacgccatgtcgccagctgagatcac 638 Query: 553 ggacgccctgtccctccacagcataaagaaccgcgactggcacatacaggcctcgtgcgc 612 ||||| || |||||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 639 cgacgctctctccctccacagcataaagaaccacgattggcacatacaggcctcatgcgc 698 Query: 613 cctcactggtgagggcctctatgatgggatgggctggatagctcagaaagttgccggaaa 672 |||| |||||||||||||| || ||| | |||||||||||||||||||| ||||| || Sbjct: 699 gatcaccggtgagggcctctacgacgggctcggctggatagctcagaaagtcgccggcaa 758 Query: 673 ggccacggcaagctgacc 690 |||||| |||||||||| Sbjct: 759 ggccacaacaagctgacc 776
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0480H08, complete sequence Length = 156301 Score = 347 bits (175), Expect = 4e-92 Identities = 319/367 (86%) Strand = Plus / Plus Query: 324 aggtgtgggatctaggaggacaagagagcctacgcacttcatgggcgacatactatagag 383 ||||||||||| |||||||||||||||| ||||| ||||| ||||| |||||||| |||| Sbjct: 121921 aggtgtgggatttaggaggacaagagagtctacggacttcgtgggcaacatactacagag 121980 Query: 384 gaactcacgctgtcatcgtggtaatcgacagcaccgaccgttctcggatcaacatcatta 443 |||| || ||||||||||| ||||| |||||||| |||||| ||||||||||||| || | Sbjct: 121981 gaacccatgctgtcatcgttgtaattgacagcacagaccgtgctcggatcaacattatca 122040 Query: 444 aggatgagctcttccggttgattcagcatgcagaccttgacaacacggcggtcctcgtgt 503 ||||||||||||||||| || ||||||||| ||||| || | | | |||||||||| Sbjct: 122041 aggatgagctcttccggctgcttcagcatggggacctcgagggcgcagtagtcctcgtgt 122100 Query: 504 ttgcgaacaagcaggatctcaaggatgccatgtcggcggctgagatcacggacgccctgt 563 | || |||||||||||||||||||| ||||||||| | ||||||||||| ||||| || | Sbjct: 122101 tcgcaaacaagcaggatctcaaggacgccatgtcgccagctgagatcaccgacgctctct 122160 Query: 564 ccctccacagcataaagaaccgcgactggcacatacaggcctcgtgcgccctcactggtg 623 ||||||||||||||||||||| ||| ||||||||||||||||| ||||| |||| |||| Sbjct: 122161 ccctccacagcataaagaaccacgattggcacatacaggcctcatgcgcgatcaccggtg 122220 Query: 624 agggcctctatgatgggatgggctggatagctcagaaagttgccggaaaggccacggcaa 683 |||||||||| || ||| | |||||||||||||||||||| ||||| |||||||| ||| Sbjct: 122221 agggcctctacgacgggctcggctggatagctcagaaagtcgccggcaaggccacaacaa 122280 Query: 684 gctgacc 690 ||||||| Sbjct: 122281 gctgacc 122287 Score = 268 bits (135), Expect = 3e-68 Identities = 180/195 (92%) Strand = Plus / Plus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 |||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||| Sbjct: 119446 gatgggggcgtggatgtcgcgggtgtggttcttgatgttcccggcgaaggagtacaagat 119505 Query: 193 cgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcgg 252 ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 119506 cgtcgtcgtggggctcgacaacgccggcaagaccaccacgctctacaagctccacctcgg 119565 Query: 253 cgaggcggtcaccgccgcgcccaccatcggcagtaacgtcgaggaggtcgtcttcaagaa 312 ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 119566 ggaggccgtcaccgccgcacccaccatcggcagcaacgtcgaggaggtcgtcttcaagaa 119625 Query: 313 tatacgcttcgaggt 327 || || |||||||| Sbjct: 119626 catccgattcgaggt 119640 Score = 176 bits (89), Expect = 9e-41 Identities = 135/149 (90%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 179 aaggagtacaagatcgtggtcgtggggctcgacaacgccgggaagaccaccacgctatac 238 ||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||| Sbjct: 116246 aaggagtacaagatcgtcgtcatggggctcgacaacgccggcaagaccaccacgctctac 116305 Query: 239 aagctccacctcggcgaggcggtcaccgccgcgcccaccatcggcagtaacgtcgaggag 298 |||||||||||||| ||||| |||||| |||| |||||||||||||| || ||||||||| Sbjct: 116306 aagctccacctcggggaggccgtcaccaccgc-cccaccatcggcagcaatgtcgaggag 116364 Query: 299 gtcgtcttcaagaatatacgcttcgaggt 327 ||| |||||||||| || || |||||||| Sbjct: 116365 gtcatcttcaagaacatccgattcgaggt 116393
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029K08, complete sequence Length = 136687 Score = 347 bits (175), Expect = 4e-92 Identities = 319/367 (86%) Strand = Plus / Plus Query: 324 aggtgtgggatctaggaggacaagagagcctacgcacttcatgggcgacatactatagag 383 ||||||||||| |||||||||||||||| ||||| ||||| ||||| |||||||| |||| Sbjct: 22199 aggtgtgggatttaggaggacaagagagtctacggacttcgtgggcaacatactacagag 22258 Query: 384 gaactcacgctgtcatcgtggtaatcgacagcaccgaccgttctcggatcaacatcatta 443 |||| || ||||||||||| ||||| |||||||| |||||| ||||||||||||| || | Sbjct: 22259 gaacccatgctgtcatcgttgtaattgacagcacagaccgtgctcggatcaacattatca 22318 Query: 444 aggatgagctcttccggttgattcagcatgcagaccttgacaacacggcggtcctcgtgt 503 ||||||||||||||||| || ||||||||| ||||| || | | | |||||||||| Sbjct: 22319 aggatgagctcttccggctgcttcagcatggggacctcgagggcgcagtagtcctcgtgt 22378 Query: 504 ttgcgaacaagcaggatctcaaggatgccatgtcggcggctgagatcacggacgccctgt 563 | || |||||||||||||||||||| ||||||||| | ||||||||||| ||||| || | Sbjct: 22379 tcgcaaacaagcaggatctcaaggacgccatgtcgccagctgagatcaccgacgctctct 22438 Query: 564 ccctccacagcataaagaaccgcgactggcacatacaggcctcgtgcgccctcactggtg 623 ||||||||||||||||||||| ||| ||||||||||||||||| ||||| |||| |||| Sbjct: 22439 ccctccacagcataaagaaccacgattggcacatacaggcctcatgcgcgatcaccggtg 22498 Query: 624 agggcctctatgatgggatgggctggatagctcagaaagttgccggaaaggccacggcaa 683 |||||||||| || ||| | |||||||||||||||||||| ||||| |||||||| ||| Sbjct: 22499 agggcctctacgacgggctcggctggatagctcagaaagtcgccggcaaggccacaacaa 22558 Query: 684 gctgacc 690 ||||||| Sbjct: 22559 gctgacc 22565 Score = 268 bits (135), Expect = 3e-68 Identities = 180/195 (92%) Strand = Plus / Plus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 |||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||| Sbjct: 19724 gatgggggcgtggatgtcgcgggtgtggttcttgatgttcccggcgaaggagtacaagat 19783 Query: 193 cgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcgg 252 ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 19784 cgtcgtcgtggggctcgacaacgccggcaagaccaccacgctctacaagctccacctcgg 19843 Query: 253 cgaggcggtcaccgccgcgcccaccatcggcagtaacgtcgaggaggtcgtcttcaagaa 312 ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 19844 ggaggccgtcaccgccgcacccaccatcggcagcaacgtcgaggaggtcgtcttcaagaa 19903 Query: 313 tatacgcttcgaggt 327 || || |||||||| Sbjct: 19904 catccgattcgaggt 19918 Score = 176 bits (89), Expect = 9e-41 Identities = 135/149 (90%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 179 aaggagtacaagatcgtggtcgtggggctcgacaacgccgggaagaccaccacgctatac 238 ||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||| Sbjct: 16524 aaggagtacaagatcgtcgtcatggggctcgacaacgccggcaagaccaccacgctctac 16583 Query: 239 aagctccacctcggcgaggcggtcaccgccgcgcccaccatcggcagtaacgtcgaggag 298 |||||||||||||| ||||| |||||| |||| |||||||||||||| || ||||||||| Sbjct: 16584 aagctccacctcggggaggccgtcaccaccgc-cccaccatcggcagcaatgtcgaggag 16642 Query: 299 gtcgtcttcaagaatatacgcttcgaggt 327 ||| |||||||||| || || |||||||| Sbjct: 16643 gtcatcttcaagaacatccgattcgaggt 16671
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 347 bits (175), Expect = 4e-92 Identities = 319/367 (86%) Strand = Plus / Plus Query: 324 aggtgtgggatctaggaggacaagagagcctacgcacttcatgggcgacatactatagag 383 ||||||||||| |||||||||||||||| ||||| ||||| ||||| |||||||| |||| Sbjct: 21364449 aggtgtgggatttaggaggacaagagagtctacggacttcgtgggcaacatactacagag 21364508 Query: 384 gaactcacgctgtcatcgtggtaatcgacagcaccgaccgttctcggatcaacatcatta 443 |||| || ||||||||||| ||||| |||||||| |||||| ||||||||||||| || | Sbjct: 21364509 gaacccatgctgtcatcgttgtaattgacagcacagaccgtgctcggatcaacattatca 21364568 Query: 444 aggatgagctcttccggttgattcagcatgcagaccttgacaacacggcggtcctcgtgt 503 ||||||||||||||||| || ||||||||| ||||| || | | | |||||||||| Sbjct: 21364569 aggatgagctcttccggctgcttcagcatggggacctcgagggcgcagtagtcctcgtgt 21364628 Query: 504 ttgcgaacaagcaggatctcaaggatgccatgtcggcggctgagatcacggacgccctgt 563 | || |||||||||||||||||||| ||||||||| | ||||||||||| ||||| || | Sbjct: 21364629 tcgcaaacaagcaggatctcaaggacgccatgtcgccagctgagatcaccgacgctctct 21364688 Query: 564 ccctccacagcataaagaaccgcgactggcacatacaggcctcgtgcgccctcactggtg 623 ||||||||||||||||||||| ||| ||||||||||||||||| ||||| |||| |||| Sbjct: 21364689 ccctccacagcataaagaaccacgattggcacatacaggcctcatgcgcgatcaccggtg 21364748 Query: 624 agggcctctatgatgggatgggctggatagctcagaaagttgccggaaaggccacggcaa 683 |||||||||| || ||| | |||||||||||||||||||| ||||| |||||||| ||| Sbjct: 21364749 agggcctctacgacgggctcggctggatagctcagaaagtcgccggcaaggccacaacaa 21364808 Query: 684 gctgacc 690 ||||||| Sbjct: 21364809 gctgacc 21364815 Score = 268 bits (135), Expect = 3e-68 Identities = 180/195 (92%) Strand = Plus / Plus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 |||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||||| Sbjct: 21361974 gatgggggcgtggatgtcgcgggtgtggttcttgatgttcccggcgaaggagtacaagat 21362033 Query: 193 cgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcgg 252 ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 21362034 cgtcgtcgtggggctcgacaacgccggcaagaccaccacgctctacaagctccacctcgg 21362093 Query: 253 cgaggcggtcaccgccgcgcccaccatcggcagtaacgtcgaggaggtcgtcttcaagaa 312 ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 21362094 ggaggccgtcaccgccgcacccaccatcggcagcaacgtcgaggaggtcgtcttcaagaa 21362153 Query: 313 tatacgcttcgaggt 327 || || |||||||| Sbjct: 21362154 catccgattcgaggt 21362168 Score = 176 bits (89), Expect = 9e-41 Identities = 135/149 (90%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 179 aaggagtacaagatcgtggtcgtggggctcgacaacgccgggaagaccaccacgctatac 238 ||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||| Sbjct: 21358774 aaggagtacaagatcgtcgtcatggggctcgacaacgccggcaagaccaccacgctctac 21358833 Query: 239 aagctccacctcggcgaggcggtcaccgccgcgcccaccatcggcagtaacgtcgaggag 298 |||||||||||||| ||||| |||||| |||| |||||||||||||| || ||||||||| Sbjct: 21358834 aagctccacctcggggaggccgtcaccaccgc-cccaccatcggcagcaatgtcgaggag 21358892 Query: 299 gtcgtcttcaagaatatacgcttcgaggt 327 ||| |||||||||| || || |||||||| Sbjct: 21358893 gtcatcttcaagaacatccgattcgaggt 21358921
>gb|AY106854.1| Zea mays PCO074589 mRNA sequence Length = 564 Score = 339 bits (171), Expect = 1e-89 Identities = 285/323 (88%) Strand = Plus / Plus Query: 131 aggatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaag 190 |||||||| ||||||||||| || |||||||| ||||||||||| || |||||||||| Sbjct: 240 aggatgggtgcgtggatgtcgcgcgtgtggttcctcatgttcccagcgcgggagtacaag 299 Query: 191 atcgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctc 250 |||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 300 ctcgtcgttgtggggctcgacaacgcggggaagaccaccacgctctacaagctccacctc 359 Query: 251 ggcgaggcggtcaccgccgcgcccaccatcggcagtaacgtcgaggaggtcgtcttcaag 310 |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 360 ggcgaggccgtcaccgccgcgcccaccatcggcagcaacgttgaggaggtcgtcttcaag 419 Query: 311 aatatacgcttcgaggtgtgggatctaggaggacaagagagcctacgcacttcatgggcg 370 || | ||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 420 aacctgcgcttcgaggtctgggatctaggagggcaagaaagcctgcgcacttcgtgggcg 479 Query: 371 acatactatagaggaactcacgctgtcatcgtggtaatcgacagcaccgaccgttctcgg 430 || ||||| | ||||| ||||| || |||||||| ||||||||||| ||||| | ||| Sbjct: 480 acgtactaccggggaacacacgccgtgatcgtggtgatcgacagcacggaccgcgcccgg 539 Query: 431 atcaacatcattaaggatgagct 453 ||||||||||| ||||| ||||| Sbjct: 540 atcaacatcatcaaggacgagct 562
>ref|NM_001073602.1| Oryza sativa (japonica cultivar-group) Os12g0569000 (Os12g0569000) mRNA, complete cds Length = 513 Score = 79.8 bits (40), Expect = 2e-11 Identities = 96/114 (84%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 ||||||| |||||||||| | ||||||||| | ||||||||||| ||| |||||||||| Sbjct: 112 gatggggacgtggatgtcgctggtgtggttcttgatgttcccggcgaagaagtacaagat 171 Query: 193 cgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctcca 246 ||| ||||| || |||||| | | | |||||||||||||| ||||||||||| Sbjct: 172 cgtcgtcgtcggcctcgacgatggc---aagaccaccacgctctacaagctcca 222
>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0003P07, complete sequence Length = 175116 Score = 79.8 bits (40), Expect = 2e-11 Identities = 96/114 (84%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 ||||||| |||||||||| | ||||||||| | ||||||||||| ||| |||||||||| Sbjct: 88991 gatggggacgtggatgtcgctggtgtggttcttgatgttcccggcgaagaagtacaagat 88932 Query: 193 cgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctcca 246 ||| ||||| || |||||| | | | |||||||||||||| ||||||||||| Sbjct: 88931 cgtcgtcgtcggcctcgacgatggc---aagaccaccacgctctacaagctcca 88881
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 79.8 bits (40), Expect = 2e-11 Identities = 96/114 (84%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 ||||||| |||||||||| | ||||||||| | ||||||||||| ||| |||||||||| Sbjct: 23452201 gatggggacgtggatgtcgctggtgtggttcttgatgttcccggcgaagaagtacaagat 23452260 Query: 193 cgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctcca 246 ||| ||||| || |||||| | | | |||||||||||||| ||||||||||| Sbjct: 23452261 cgtcgtcgtcggcctcgacgatggc---aagaccaccacgctctacaagctcca 23452311
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 79.8 bits (40), Expect = 2e-11 Identities = 96/114 (84%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 ||||||| |||||||||| | ||||||||| | ||||||||||| ||| |||||||||| Sbjct: 6370961 gatggggacgtggatgtcgctggtgtggttcttgatgttcccggcgaagaagtacaagat 6370902 Query: 193 cgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctcca 246 ||| ||||| || |||||| | | | |||||||||||||| ||||||||||| Sbjct: 6370901 cgtcgtcgtcggcctcgacgatggc---aagaccaccacgctctacaagctcca 6370851
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 79.8 bits (40), Expect = 2e-11 Identities = 96/114 (84%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 ||||||| |||||||||| | ||||||||| | ||||||||||| ||| |||||||||| Sbjct: 49958 gatggggacgtggatgtcgctggtgtggttcttgatgttcccggcgaagaagtacaagat 49899 Query: 193 cgtggtcgtggggctcgacaacgccgggaagaccaccacgctatacaagctcca 246 ||| ||||| || |||||| | | | |||||||||||||| ||||||||||| Sbjct: 49898 cgtcgtcgtcggcctcgacgatggc---aagaccaccacgctctacaagctcca 49848
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 77.8 bits (39), Expect = 6e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 |||||||||||||||||| ||||||||||| | ||||||||||| ||| |||||||||| Sbjct: 26343403 gatgggggcgtggatgtcgcgggtgtggttcttgatgttcccggcgaagaagtacaagat 26343344 Query: 193 cgt 195 ||| Sbjct: 26343343 cgt 26343341
>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete sequence Length = 122939 Score = 77.8 bits (39), Expect = 6e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 133 gatgggggcgtggatgtcccgggtgtggtttctcatgttcccggccaaggagtacaagat 192 |||||||||||||||||| ||||||||||| | ||||||||||| ||| |||||||||| Sbjct: 81553 gatgggggcgtggatgtcgcgggtgtggttcttgatgttcccggcgaagaagtacaagat 81494 Query: 193 cgt 195 ||| Sbjct: 81493 cgt 81491
>ref|NM_113195.2| Arabidopsis thaliana ATARFC1; GTP binding (ATARFC1) mRNA, complete cds Length = 1326 Score = 63.9 bits (32), Expect = 9e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 302 gtcttcaagaatatacgcttcgaggtgtgggatctaggaggacaagagagcctacgcact 361 |||| ||||||||| ||||| ||||| |||||||| || || ||||| || ||| | ||| Sbjct: 350 gtctacaagaatattcgctttgaggtatgggatcttggtgggcaagataggctaagaact 409 Query: 362 tcatgggcgacatactatagaggaactcacgctgtcatcgtggt 405 |||||||| ||||||||| | ||||| || ||||| || ||||| Sbjct: 410 tcatgggcaacatactatcgtggaacacatgctgtgattgtggt 453
>gb|AY096401.1| Arabidopsis thaliana putative ADP-ribosylation factor (At3g22950) mRNA, complete cds Length = 583 Score = 63.9 bits (32), Expect = 9e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 302 gtcttcaagaatatacgcttcgaggtgtgggatctaggaggacaagagagcctacgcact 361 |||| ||||||||| ||||| ||||| |||||||| || || ||||| || ||| | ||| Sbjct: 169 gtctacaagaatattcgctttgaggtatgggatcttggtgggcaagataggctaagaact 228 Query: 362 tcatgggcgacatactatagaggaactcacgctgtcatcgtggt 405 |||||||| ||||||||| | ||||| || ||||| || ||||| Sbjct: 229 tcatgggcaacatactatcgtggaacacatgctgtgattgtggt 272
>gb|AY063958.1| Arabidopsis thaliana putative ADP-ribosylation factor (At3g22950) mRNA, complete cds Length = 895 Score = 63.9 bits (32), Expect = 9e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 302 gtcttcaagaatatacgcttcgaggtgtgggatctaggaggacaagagagcctacgcact 361 |||| ||||||||| ||||| ||||| |||||||| || || ||||| || ||| | ||| Sbjct: 333 gtctacaagaatattcgctttgaggtatgggatcttggtgggcaagataggctaagaact 392 Query: 362 tcatgggcgacatactatagaggaactcacgctgtcatcgtggt 405 |||||||| ||||||||| | ||||| || ||||| || ||||| Sbjct: 393 tcatgggcaacatactatcgtggaacacatgctgtgattgtggt 436
>gb|AY086337.1| Arabidopsis thaliana clone 24097 mRNA, complete sequence Length = 869 Score = 63.9 bits (32), Expect = 9e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 302 gtcttcaagaatatacgcttcgaggtgtgggatctaggaggacaagagagcctacgcact 361 |||| ||||||||| ||||| ||||| |||||||| || || ||||| || ||| | ||| Sbjct: 351 gtctacaagaatattcgctttgaggtatgggatcttggtgggcaagataggctaagaact 410 Query: 362 tcatgggcgacatactatagaggaactcacgctgtcatcgtggt 405 |||||||| ||||||||| | ||||| || ||||| || ||||| Sbjct: 411 tcatgggcaacatactatcgtggaacacatgctgtgattgtggt 454
>emb|BX825336.1|CNS0A6G6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL30ZA12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 795 Score = 63.9 bits (32), Expect = 9e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 302 gtcttcaagaatatacgcttcgaggtgtgggatctaggaggacaagagagcctacgcact 361 |||| ||||||||| ||||| ||||| |||||||| || || ||||| || ||| | ||| Sbjct: 230 gtctacaagaatattcgctttgaggtatgggatcttggtgggcaagataggctaagaact 289 Query: 362 tcatgggcgacatactatagaggaactcacgctgtcatcgtggt 405 |||||||| ||||||||| | ||||| || ||||| || ||||| Sbjct: 290 tcatgggcaacatactatcgtggaacacatgctgtgattgtggt 333
>emb|CT828556.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA032C07, full insert sequence Length = 630 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 645 gctggatagctcagaaagttgccggaaaggccacggcaagctgacc 690 ||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 314 gctggatagctcagaaagtcgccggcaaggccacaacaagctgacc 359
>emb|BX826162.1|CNS0A6BK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL88ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 769 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 302 gtcttcaagaatatacgcttcgaggtgtgggatctaggaggacaagagagcctacgcact 361 |||| ||||||||| ||||| ||||| |||||||| || || ||||| || ||| | ||| Sbjct: 229 gtctacaagaatattcgctttgaggtatgggatcttggtgggcaagaaaggctaagaact 288 Query: 362 tcatgggcgacatactat 379 |||||||| ||||||||| Sbjct: 289 tcatgggcaacatactat 306
>emb|CT832365.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA242A13, full insert sequence Length = 2149 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Plus Query: 200 gtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcggcgag 256 |||||||||||| |||||| |||||||||| || ||||||||| | ||||||||| Sbjct: 1443 gtggggctcgacgccgccggaaagaccaccatcctctacaagctcaagctcggcgag 1499
>dbj|AK242214.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075171N24, full insert sequence Length = 879 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Plus Query: 200 gtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcggcgag 256 |||||||||||| |||||| |||||||||| || ||||||||| | ||||||||| Sbjct: 176 gtggggctcgacgccgccggaaagaccaccatcctctacaagctcaagctcggcgag 232
>ref|NM_001065742.1| Oryza sativa (japonica cultivar-group) Os07g0223400 (Os07g0223400) mRNA, complete cds Length = 806 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Plus Query: 200 gtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcggcgag 256 |||||||||||| |||||| |||||||||| || ||||||||| | ||||||||| Sbjct: 100 gtggggctcgacgccgccggaaagaccaccatcctctacaagctcaagctcggcgag 156
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Plus Query: 200 gtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcggcgag 256 |||||||||||| |||||| |||||||||| || ||||||||| | ||||||||| Sbjct: 6855261 gtggggctcgacgccgccggaaagaccaccatcctctacaagctcaagctcggcgag 6855317
>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0592C06 Length = 160071 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Plus Query: 200 gtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcggcgag 256 |||||||||||| |||||| |||||||||| || ||||||||| | ||||||||| Sbjct: 149395 gtggggctcgacgccgccggaaagaccaccatcctctacaagctcaagctcggcgag 149451
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Plus Query: 200 gtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcggcgag 256 |||||||||||| |||||| |||||||||| || ||||||||| | ||||||||| Sbjct: 11516 gtggggctcgacgccgccggaaagaccaccatcctctacaagctcaagctcggcgag 11572
>gb|AF012896.1|AF012896 Oryza sativa ADP-ribosylation factor 1 (Os-ARF1) mRNA, complete cds Length = 840 Score = 50.1 bits (25), Expect = 0.014 Identities = 49/57 (85%) Strand = Plus / Plus Query: 200 gtggggctcgacaacgccgggaagaccaccacgctatacaagctccacctcggcgag 256 |||||||||||| |||||| |||||||||| || ||||||||| | ||||||||| Sbjct: 115 gtggggctcgacgccgccggaaagaccaccatcctctacaagctcaagctcggcgag 171
>ref|XM_501834.1| Yarrowia lipolytica CLIB122, YALI0C14586g predicted mRNA Length = 537 Score = 48.1 bits (24), Expect = 0.054 Identities = 33/36 (91%) Strand = Plus / Plus Query: 500 gtgtttgcgaacaagcaggatctcaaggatgccatg 535 |||||||| |||||||||||||| ||||| |||||| Sbjct: 355 gtgtttgccaacaagcaggatcttaaggaagccatg 390
>emb|CR703034.2|CNS0G5EU Tetraodon nigroviridis full-length cDNA Length = 1024 Score = 48.1 bits (24), Expect = 0.054 Identities = 36/40 (90%) Strand = Plus / Plus Query: 190 gatcgtggtcgtggggctcgacaacgccgggaagaccacc 229 ||||||| || ||||||| ||||||||||| ||||||||| Sbjct: 186 gatcgtgctcctggggctggacaacgccggcaagaccacc 225
>emb|CR697538.2|CNS0G166 Tetraodon nigroviridis full-length cDNA Length = 1057 Score = 48.1 bits (24), Expect = 0.054 Identities = 36/40 (90%) Strand = Plus / Plus Query: 190 gatcgtggtcgtggggctcgacaacgccgggaagaccacc 229 ||||||| || ||||||| ||||||||||| ||||||||| Sbjct: 232 gatcgtgctcctggggctggacaacgccggcaagaccacc 271
>emb|CR696126.2|CNS0G02Y Tetraodon nigroviridis full-length cDNA Length = 1039 Score = 48.1 bits (24), Expect = 0.054 Identities = 36/40 (90%) Strand = Plus / Plus Query: 190 gatcgtggtcgtggggctcgacaacgccgggaagaccacc 229 ||||||| || ||||||| ||||||||||| ||||||||| Sbjct: 206 gatcgtgctcctggggctggacaacgccggcaagaccacc 245
>emb|CR694615.2|CNS0FYWZ Tetraodon nigroviridis full-length cDNA Length = 1098 Score = 48.1 bits (24), Expect = 0.054 Identities = 36/40 (90%) Strand = Plus / Plus Query: 190 gatcgtggtcgtggggctcgacaacgccgggaagaccacc 229 ||||||| || ||||||| ||||||||||| ||||||||| Sbjct: 277 gatcgtgctcctggggctggacaacgccggcaagaccacc 316
>emb|CR692329.2|CNS0FX5H Tetraodon nigroviridis full-length cDNA Length = 1060 Score = 48.1 bits (24), Expect = 0.054 Identities = 36/40 (90%) Strand = Plus / Plus Query: 190 gatcgtggtcgtggggctcgacaacgccgggaagaccacc 229 ||||||| || ||||||| ||||||||||| ||||||||| Sbjct: 225 gatcgtgctcctggggctggacaacgccggcaagaccacc 264
>emb|CR688954.2|CNS0FUJQ Tetraodon nigroviridis full-length cDNA Length = 1067 Score = 48.1 bits (24), Expect = 0.054 Identities = 36/40 (90%) Strand = Plus / Plus Query: 190 gatcgtggtcgtggggctcgacaacgccgggaagaccacc 229 ||||||| || ||||||| ||||||||||| ||||||||| Sbjct: 230 gatcgtgctcctggggctggacaacgccggcaagaccacc 269
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.054 Identities = 24/24 (100%) Strand = Plus / Plus Query: 250 cggcgaggcggtcaccgccgcgcc 273 |||||||||||||||||||||||| Sbjct: 4896375 cggcgaggcggtcaccgccgcgcc 4896398
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 48.1 bits (24), Expect = 0.054 Identities = 33/36 (91%) Strand = Plus / Plus Query: 500 gtgtttgcgaacaagcaggatctcaaggatgccatg 535 |||||||| |||||||||||||| ||||| |||||| Sbjct: 2007183 gtgtttgccaacaagcaggatcttaaggaagccatg 2007218
>ref|NM_180415.1| Arabidopsis thaliana AGG2 (G-PROTEIN GAMMA SUBUNIT 2) (AGG2) mRNA, complete cds Length = 1779 Score = 44.1 bits (22), Expect = 0.85 Identities = 67/82 (81%) Strand = Plus / Minus Query: 324 aggtgtgggatctaggaggacaagagagcctacgcacttcatgggcgacatactatagag 383 |||| |||||||| || || ||||| || ||| | ||||||||||| ||||||||| | | Sbjct: 1646 aggtatgggatcttggtgggcaagataggctaagaacttcatgggcaacatactatcgtg 1587 Query: 384 gaactcacgctgtcatcgtggt 405 |||| || ||||| || ||||| Sbjct: 1586 gaacacatgctgtgattgtggt 1565
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 gcgaggcggtcaccgccgcgcc 273 |||||||||||||||||||||| Sbjct: 4552228 gcgaggcggtcaccgccgcgcc 4552249
>gb|AC121847.2| Mus musculus BAC clone RP24-86M13 from 3, complete sequence Length = 190165 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 114 ggatttgagggaggggaaggat 135 |||||||||||||||||||||| Sbjct: 154266 ggatttgagggaggggaaggat 154287
>dbj|AP001300.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F5N5 Length = 71327 Score = 44.1 bits (22), Expect = 0.85 Identities = 67/82 (81%) Strand = Plus / Minus Query: 324 aggtgtgggatctaggaggacaagagagcctacgcacttcatgggcgacatactatagag 383 |||| |||||||| || || ||||| || ||| | ||||||||||| ||||||||| | | Sbjct: 48666 aggtatgggatcttggtgggcaagataggctaagaacttcatgggcaacatactatcgtg 48607 Query: 384 gaactcacgctgtcatcgtggt 405 |||| || ||||| || ||||| Sbjct: 48606 gaacacatgctgtgattgtggt 48585
>gb|AC139316.4| Mus musculus BAC clone RP24-500I24 from 3, complete sequence Length = 187000 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 114 ggatttgagggaggggaaggat 135 |||||||||||||||||||||| Sbjct: 105998 ggatttgagggaggggaaggat 105977
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cgaggcggtcaccgccgcgcc 273 ||||||||||||||||||||| Sbjct: 968259 cgaggcggtcaccgccgcgcc 968279
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 gagctcttccggttgattcag 469 ||||||||||||||||||||| Sbjct: 18270202 gagctcttccggttgattcag 18270222
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cgaggcggtcaccgccgcgcc 273 ||||||||||||||||||||| Sbjct: 422241 cgaggcggtcaccgccgcgcc 422261
>dbj|AB261027.1| Entamoeba histolytica gene for Small GTPase EhArfA6, partial cds Length = 641 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 aggtgtgggatctaggaggacaaga 348 ||||||||||| ||||||||||||| Sbjct: 292 aggtgtgggatttaggaggacaaga 316
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 cgccgcgcccaccatcggcag 285 ||||||||||||||||||||| Sbjct: 476901 cgccgcgcccaccatcggcag 476921
>gb|DQ223164.1| Silurus meridionalis clone HLJCF36 microsatellite sequence Length = 532 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 686 tgaccacaaaaacattgtgtgtttt 710 ||||||||||||||| ||||||||| Sbjct: 360 tgaccacaaaaacatcgtgtgtttt 384
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tgagctcttccggttgattca 468 ||||||||||||||||||||| Sbjct: 1522953 tgagctcttccggttgattca 1522933
>gb|AC006494.13| Drosophila melanogaster clone BACR48C17, complete sequence Length = 164501 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 gagctcttccggttgattcag 469 ||||||||||||||||||||| Sbjct: 20585 gagctcttccggttgattcag 20605
>gb|AC008196.8| Drosophila melanogaster clone BACR30J14, complete sequence Length = 179562 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 gagctcttccggttgattcag 469 ||||||||||||||||||||| Sbjct: 73298 gagctcttccggttgattcag 73318
>gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, complete sequence Length = 195273 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 tgggatctaggaggacaagag 349 ||||||||||||||||||||| Sbjct: 73889 tgggatctaggaggacaagag 73909
>gb|AC140267.2| Mus musculus BAC clone RP24-303O5 from chromosome 15, complete sequence Length = 169842 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 621 gtgagggcctctatgatggga 641 ||||||||||||||||||||| Sbjct: 8295 gtgagggcctctatgatggga 8275
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 cgccgcgcccaccatcggcag 285 ||||||||||||||||||||| Sbjct: 2181184 cgccgcgcccaccatcggcag 2181204
>gb|AC024852.2| Caenorhabditis elegans cosmid Y71F9AM, complete sequence Length = 20285 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 769 tttatttatattgttgcatat 789 ||||||||||||||||||||| Sbjct: 4201 tttatttatattgttgcatat 4221
>ref|NM_142787.1| Drosophila melanogaster CG12499-RA (CG12499), mRNA Length = 6180 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 gagctcttccggttgattcag 469 ||||||||||||||||||||| Sbjct: 2001 gagctcttccggttgattcag 1981
>dbj|AK165176.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length enriched library, clone:E970001F24 product:ADP-ribosylation factor 3, full insert sequence Length = 3538 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 215 gccgggaagaccaccacgctatacaagct 243 ||||||||||||||||| || |||||||| Sbjct: 364 gccgggaagaccaccaccctctacaagct 392
>ref|NM_058676.3| Caenorhabditis elegans NTF2-related ExporT protein family member (nxt-1) (nxt-1) mRNA, complete cds Length = 558 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 769 tttatttatattgttgcatat 789 ||||||||||||||||||||| Sbjct: 521 tttatttatattgttgcatat 541
>ref|XM_749320.1| Aspergillus fumigatus Af293 ADP-ribosylation factor 6 (Afu3g12080) partial mRNA Length = 555 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 gtgtttgcgaacaagcaggat 520 ||||||||||||||||||||| Sbjct: 370 gtgtttgcgaacaagcaggat 390
>gb|AC108060.3| Homo sapiens BAC clone RP11-413M22 from 4, complete sequence Length = 138302 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 702 gtgtgttttcgtgaatttgttggaa 726 ||||||||||||||| ||||||||| Sbjct: 54844 gtgtgttttcgtgaaattgttggaa 54868
>gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosome 15, complete sequence Length = 213367 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 621 gtgagggcctctatgatggga 641 ||||||||||||||||||||| Sbjct: 147407 gtgagggcctctatgatggga 147387
>ref|XM_652043.1| Entamoeba histolytica HM-1:IMSS ADP-ribosylation factor-like protein (4.t00014) partial mRNA Length = 534 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 aggtgtgggatctaggaggacaaga 348 ||||||||||| ||||||||||||| Sbjct: 185 aggtgtgggatttaggaggacaaga 209
>ref|XM_652004.1| Entamoeba histolytica HM-1:IMSS ADP-ribosylation factor-like protein (4.t00012) partial mRNA Length = 534 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 aggtgtgggatctaggaggacaaga 348 ||||||||||| ||||||||||||| Sbjct: 185 aggtgtgggatttaggaggacaaga 209
>ref|XM_644086.1| Entamoeba histolytica HM-1:IMSS ADP-ribosylation factor-like protein (335.t00008) partial mRNA Length = 534 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 aggtgtgggatctaggaggacaaga 348 ||||||||||| ||||||||||||| Sbjct: 185 aggtgtgggatttaggaggacaaga 209
>gb|AY466441.1| Saccharopolyspora spinosa NRLL 18395 obscurin polyketide synthase gene locus, complete sequence Length = 108584 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 caccgccgcgcccaccatcgg 282 ||||||||||||||||||||| Sbjct: 68393 caccgccgcgcccaccatcgg 68373
>ref|XM_569803.1| Cryptococcus neoformans var. neoformans JEC21 dynamin GTPase (CNC05070) partial mRNA Length = 2969 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tgagctcttccggttgattca 468 ||||||||||||||||||||| Sbjct: 1155 tgagctcttccggttgattca 1135
>emb|BX469897.6| Zebrafish DNA sequence from clone CH211-39F22 in linkage group 4, complete sequence Length = 186500 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 690 cacaaaaacattgtgtgtttt 710 ||||||||||||||||||||| Sbjct: 48347 cacaaaaacattgtgtgtttt 48327
>gb|AC155729.3| Mus musculus 6 BAC RP24-173B18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198782 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 620 ggtgagggcctctatgatggg 640 ||||||||||||||||||||| Sbjct: 99553 ggtgagggcctctatgatggg 99573 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 126,064,687 Number of extensions: 6448004 Number of successful extensions: 126118 Number of sequences better than 10.0: 68 Number of HSP's gapped: 126115 Number of HSP's successfully gapped: 80 Length of query: 889 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 867 Effective length of database: 18,508,616,841 Effective search space: 16046970801147 Effective search space used: 16046970801147 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
