ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf111g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8LPQ8:MSSP2_ARATH Monosaccharide-sensing protein 2 - Arabidopsi... 33 1.1
2Q86V42:F124A_HUMAN Protein FAM124A - Homo sapiens (Human) 30 7.0
3P40495:LYS12_YEAST Homoisocitrate dehydrogenase, mitochondrial p... 30 9.2

>Q8LPQ8:MSSP2_ARATH Monosaccharide-sensing protein 2 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 729
 Score = 33.1 bits (74), Expect = 1.1
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 338 WEEENGVGEGNDYPGEEG 285
           W+EEN VGEG DYP + G
Sbjct: 341 WDEENLVGEGEDYPSDHG 358



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>Q86V42:F124A_HUMAN Protein FAM124A - Homo sapiens (Human)|
          Length = 546

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 21/68 (30%), Positives = 31/68 (45%)
 Frame = +3

Query: 498 RCASHFLKHSYLRTGEVLFRCRMHTNCSFPRLFFRSMQYHVLQSSSQCTSTVAPTLQRRA 677
           RC+SH+  H   R G +    R+ T  S+  L F + +     SSS  T+  AP     +
Sbjct: 449 RCSSHWAAHKDSREGPLPTVSRVTTEASWASLPFFTKR----SSSSSATARAAPPAPSTS 504

Query: 678 MLLDTPSQ 701
            L D+  Q
Sbjct: 505 TLTDSSPQ 512



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>P40495:LYS12_YEAST Homoisocitrate dehydrogenase, mitochondrial precursor -|
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 371

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 436 FQWTTKKLPDRTTLTNEDSCFGALVIFSSTPTYEQEKY 549
           FQ T K LPD T    ++ C GAL     +PT + E Y
Sbjct: 69  FQETGKALPDETVKVLKEQCQGALFGAVQSPTTKVEGY 106


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 90,048,034
Number of extensions: 1650702
Number of successful extensions: 5027
Number of sequences better than 10.0: 3
Number of HSP's gapped: 5020
Number of HSP's successfully gapped: 3
Length of query: 239
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 129
Effective length of database: 70,513,989
Effective search space: 9096304581
Effective search space used: 9096304581
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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