ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf111f19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os04g0188500:Os04g0188500 | 65 | 3e-11 | 2 | Os08g0205800:Os08g0205800 | 30 | 1.5 | 3 | AK109792:Os08g0409500 | 30 | 1.5 | 4 | Os04g0188400:Os04g0188400 | 30 | 1.9 | 5 | AK121476:Os11g0461000 | 28 | 4.2 | 6 | AK106123:Os11g0461000 | 28 | 4.2 | 7 | AK072925:Os11g0461000 | 28 | 4.2 | 8 | AK071901:Os01g0961600 | 25 | 5.4 | 9 | AK063388:Os01g0961600 | 25 | 5.4 | 10 | Os12g0162900:Os12g0162900 | 28 | 7.2 | 11 | AK111256:Os08g0320500 | 28 | 7.2 | 12 | Os01g0215100:Os01g0215100 | 27 | 9.4 |
|---|
>Os04g0188500:Os04g0188500 | Length = 139 Score = 65.5 bits (158), Expect = 3e-11 Identities = 41/72 (56%), Positives = 46/72 (63%), Gaps = 3/72 (4%) Frame = +3 Query: 72 TMKEPLKASRSKILVVLLVFAMVTQGLVICVKGIE-RNDIAGKAVSAKPTL--GAGSSTT 242 TMKE LKA R +I+ VLL FAMV Q + I G D G + SAK TL GS T+ Sbjct: 17 TMKEKLKA-RFQIIAVLLAFAMVAQAMAIRGTGTTAEQDNTGGSTSAKHTLPQAVGSGTS 75 Query: 243 VDNHHAIPRDQY 278 VDNHHAIPRDQY Sbjct: 76 VDNHHAIPRDQY 87
>Os08g0205800:Os08g0205800 | Length = 91 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = -2 Query: 342 DTSSL*YHHHCHLIRPLLHGYYTGPVVWHGGCPRLCCC 229 +T+S +HHH H G W G C LCCC Sbjct: 57 ETTSRGHHHHHH----------HGDGFWKGCCAALCCC 84
>AK109792:Os08g0409500 | Length = 426 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 Query: 178 GMISPARPLVQNPPLVQAAAQPWTTTMPYHG 270 G+ A P Q PPL QAAA WT +P G Sbjct: 55 GLQELASPPPQLPPLSQAAAHQWTAPLPGGG 85
>Os04g0188400:Os04g0188400 | Length = 81 Score = 29.6 bits (65), Expect = 1.9 Identities = 10/14 (71%), Positives = 13/14 (92%) Frame = +3 Query: 237 TTVDNHHAIPRDQY 278 T++DNHHAIPR +Y Sbjct: 45 TSIDNHHAIPRPEY 58
>AK121476:Os11g0461000 | Length = 491 Score = 28.5 bits (62), Expect = 4.2 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = -1 Query: 253 WLSTVVLLPAPRVGFALTALPAISFLSIPFTQITKP*VTMAKTSKTTNILLLLAFSGSFM 74 W+++ AP G A+T+LP +PF+ T + +++T + L F+ Sbjct: 36 WVASSAATVAPAAGVAVTSLPGFDG-PLPFSLET----GYVEVNESTGVRLFY----YFV 86 Query: 73 VSEKSPP*DSINVWI 29 SEK P D + +W+ Sbjct: 87 QSEKDPDVDPLLLWL 101
>AK106123:Os11g0461000 | Length = 491 Score = 28.5 bits (62), Expect = 4.2 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = -1 Query: 253 WLSTVVLLPAPRVGFALTALPAISFLSIPFTQITKP*VTMAKTSKTTNILLLLAFSGSFM 74 W+++ AP G A+T+LP +PF+ T + +++T + L F+ Sbjct: 36 WVASSAATVAPAAGVAVTSLPGFDG-PLPFSLET----GYVEVNESTGVRLFY----YFV 86 Query: 73 VSEKSPP*DSINVWI 29 SEK P D + +W+ Sbjct: 87 QSEKDPDVDPLLLWL 101
>AK072925:Os11g0461000 | Length = 189 Score = 28.5 bits (62), Expect = 4.2 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = -1 Query: 253 WLSTVVLLPAPRVGFALTALPAISFLSIPFTQITKP*VTMAKTSKTTNILLLLAFSGSFM 74 W+++ AP G A+T+LP +PF+ T + +++T + L F+ Sbjct: 36 WVASSAATVAPAAGVAVTSLPGFDG-PLPFSLET----GYVEVNESTGVRLFY----YFV 86 Query: 73 VSEKSPP*DSINVWI 29 SEK P D + +W+ Sbjct: 87 QSEKDPDVDPLLLWL 101
>AK071901:Os01g0961600 | Length = 416 Score = 24.6 bits (52), Expect(2) = 5.4 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +3 Query: 60 DFSDTMKEPLKASRSKIL 113 +F DTMK+P + SR ++L Sbjct: 157 EFEDTMKDPAEYSRGELL 174 Score = 21.9 bits (45), Expect(2) = 5.4 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = +2 Query: 32 PNVDRISRWRFLRHHE 79 PN RI +W L H E Sbjct: 120 PNSRRIDKWSLLSHDE 135
>AK063388:Os01g0961600 | Length = 416 Score = 24.6 bits (52), Expect(2) = 5.4 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +3 Query: 60 DFSDTMKEPLKASRSKIL 113 +F DTMK+P + SR ++L Sbjct: 157 EFEDTMKDPAEYSRGELL 174 Score = 21.9 bits (45), Expect(2) = 5.4 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = +2 Query: 32 PNVDRISRWRFLRHHE 79 PN RI +W L H E Sbjct: 120 PNSRRIDKWSLLSHDE 135
>Os12g0162900:Os12g0162900 | Length = 1004 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -3 Query: 335 VLCSITTTAT*SVLSSMATILVPWYGMV 252 +L + TAT SVL S ATI+ PW +V Sbjct: 187 ILLASPGTATTSVLCSAATIMWPWEALV 214
>AK111256:Os08g0320500 | Length = 185 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +1 Query: 196 RPLVQNPPLVQAAAQPWTTTMPYHGTS 276 +P +PPL AA PWT P TS Sbjct: 131 KPASPSPPLWTAAPPPWTAASPSPATS 157
>Os01g0215100:Os01g0215100 | Length = 429 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -3 Query: 221 KGGFCTNGLAGDIIPLYPLYTNHQALSNHGEDKQDN*YLTPACFQW 84 +GG +GL G+ L P + NH ALS L+P F W Sbjct: 61 QGGPGCSGLTGNFFELGPYFVNHDALS-----------LSPNPFAW 95 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,787,873 Number of extensions: 323393 Number of successful extensions: 873 Number of sequences better than 10.0: 12 Number of HSP's gapped: 872 Number of HSP's successfully gapped: 14 Length of query: 222 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 125 Effective length of database: 11,515,878 Effective search space: 1439484750 Effective search space used: 1439484750 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
