ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf111f19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BC068719.1| Xenopus laevis hypothetical protein MGC81163, mRNA (cDNA clone MGC:81163 IMAGE:6318052), complete cds Length = 2681 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 ttattattattatcttctgtac 445 |||||||||||||||||||||| Sbjct: 1416 ttattattattatcttctgtac 1395
>gb|AY631110.1| Sororipyrgus marshalli clone SmarsPi12 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 644 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 421 ttgttattattattatcttctg 442 |||||||||||||||||||||| Sbjct: 272 ttgttattattattatcttctg 293
>emb|CR457453.7| Zebrafish DNA sequence from clone CH211-76I17 in linkage group 14, complete sequence Length = 171899 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Plus Query: 411 gcagccctaattgttattattattat 436 |||||||||||| ||||||||||||| Sbjct: 165066 gcagccctaattattattattattat 165091
>emb|CT009687.10| Zebrafish DNA sequence from clone DKEY-5I20 in linkage group 14, complete sequence Length = 189137 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Plus Query: 411 gcagccctaattgttattattattat 436 |||||||||||| ||||||||||||| Sbjct: 28392 gcagccctaattattattattattat 28417
>gb|CP000263.1| Buchnera aphidicola str. Cc (Cinara cedri), complete genome Length = 416380 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 ttattattattatcttctgta 444 ||||||||||||||||||||| Sbjct: 120856 ttattattattatcttctgta 120876
>gb|BT026437.1| Arabidopsis thaliana At1g72200 mRNA, complete cds Length = 1215 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 caggtggcagtggtggtgata 324 ||||||||||||||||||||| Sbjct: 1049 caggtggcagtggtggtgata 1069
>ref|NM_105879.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT1G72200) mRNA, complete cds Length = 1527 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 caggtggcagtggtggtgata 324 ||||||||||||||||||||| Sbjct: 1221 caggtggcagtggtggtgata 1241
>gb|BT020487.1| Arabidopsis thaliana At1g72200 gene, complete cds Length = 1317 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 caggtggcagtggtggtgata 324 ||||||||||||||||||||| Sbjct: 1055 caggtggcagtggtggtgata 1075
>gb|AC113277.8| Mus musculus chromosome 3, clone RP23-386C15, complete sequence Length = 210390 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 ttgttattattattatcttct 441 ||||||||||||||||||||| Sbjct: 70326 ttgttattattattatcttct 70346
>gb|AC124371.2| Mus musculus BAC clone RP24-556P1 from chromosome 8, complete sequence Length = 158228 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 420 attgttattattattatcttctgta 444 ||||||||||||||||| ||||||| Sbjct: 12313 attgttattattattattttctgta 12337
>gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, complete sequence Length = 188243 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 attgttattattattatcttc 440 ||||||||||||||||||||| Sbjct: 69717 attgttattattattatcttc 69697
>gb|AC108527.6| Rattus norvegicus 9 BAC CH230-7F11 (Children's Hospital Oakland Research Institute) complete sequence Length = 225777 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 ttgttattattattatcttct 441 ||||||||||||||||||||| Sbjct: 148544 ttgttattattattatcttct 148524
>ref|XM_457858.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C04598g) partial mRNA Length = 2769 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 ttgttattattattatcttct 441 ||||||||||||||||||||| Sbjct: 2281 ttgttattattattatcttct 2301
>ref|XM_626546.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_3590), partial mRNA Length = 19740 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 ttattattattatcttctgta 444 ||||||||||||||||||||| Sbjct: 10631 ttattattattatcttctgta 10611
>emb|BX936301.8| Zebrafish DNA sequence from clone CH211-261H10 in linkage group 9, complete sequence Length = 112250 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 attgttattattattatcttc 440 ||||||||||||||||||||| Sbjct: 55234 attgttattattattatcttc 55254
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 atcttctgtacatgaaaataa 455 ||||||||||||||||||||| Sbjct: 12080036 atcttctgtacatgaaaataa 12080016 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 426 attattattatcttctgtacatga 449 |||||||||||||| ||||||||| Sbjct: 4214755 attattattatcttttgtacatga 4214732
>gb|AC107642.14| Mus musculus chromosome 8, clone RP23-54J1, complete sequence Length = 218180 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 attgttattattattatcttctgta 444 ||||||||||||||||| ||||||| Sbjct: 76363 attgttattattattattttctgta 76339
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 ttgttattattattatcttct 441 ||||||||||||||||||||| Sbjct: 379416 ttgttattattattatcttct 379436
>emb|BX247888.10| Zebrafish DNA sequence from clone DKEY-10D15 in linkage group 9, complete sequence Length = 223425 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 attgttattattattatcttc 440 ||||||||||||||||||||| Sbjct: 77081 attgttattattattatcttc 77101
>gb|AC067754.6|AC067754 Arabidopsis thaliana chromosome 1 BAC T9N14 genomic sequence, complete sequence Length = 98874 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 caggtggcagtggtggtgata 324 ||||||||||||||||||||| Sbjct: 34046 caggtggcagtggtggtgata 34026
>emb|BX005354.11| Zebrafish DNA sequence from clone DKEY-49L7, complete sequence Length = 149165 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 attgttattattattatcttc 440 ||||||||||||||||||||| Sbjct: 49679 attgttattattattatcttc 49659
>gb|BT004268.1| Arabidopsis thaliana clone RAFL15-29-G07 (R50085) putative RING-H2 zinc finger protein ATL3 (At1g72200) mRNA, complete cds Length = 1554 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 caggtggcagtggtggtgata 324 ||||||||||||||||||||| Sbjct: 1221 caggtggcagtggtggtgata 1241
>dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028G04 Length = 159761 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 atcttctgtacatgaaaataa 455 ||||||||||||||||||||| Sbjct: 125700 atcttctgtacatgaaaataa 125680
>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1153F04 Length = 158174 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 atcttctgtacatgaaaataa 455 ||||||||||||||||||||| Sbjct: 46976 atcttctgtacatgaaaataa 46956
>emb|BX649437.8| Zebrafish DNA sequence from clone DKEY-28J9 in linkage group 16, complete sequence Length = 158346 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 412 cagccctaattgttattattattat 436 ||||||||||| ||||||||||||| Sbjct: 67684 cagccctaattattattattattat 67660
>gb|AC084064.6| Homo sapiens chromosome 16 clone RP11-467I17, complete sequence Length = 189897 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 ttgttattattattatcttct 441 ||||||||||||||||||||| Sbjct: 150791 ttgttattattattatcttct 150771
>emb|BX816038.1|CNS0AD9G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1456 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 caggtggcagtggtggtgata 324 ||||||||||||||||||||| Sbjct: 1209 caggtggcagtggtggtgata 1229
>emb|BX842660.2| Mouse DNA sequence from clone RP23-54L24 on chromosome 11, complete sequence Length = 31320 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ggtggcagtggtggtgatact 326 ||||||||||||||||||||| Sbjct: 28971 ggtggcagtggtggtgatact 28991
>emb|BX649217.1| Mouse DNA sequence from clone RP24-86D15 on chromosome 11, complete sequence Length = 10046 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 ggtggcagtggtggtgatact 326 ||||||||||||||||||||| Sbjct: 7697 ggtggcagtggtggtgatact 7717
>emb|AL683879.19| Mouse DNA sequence from clone RP23-36D5 on chromosome 11, complete sequence Length = 202441 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 418 taattgttattattattatct 438 ||||||||||||||||||||| Sbjct: 156401 taattgttattattattatct 156381
>ref|XM_001022050.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00564510) mRNA, complete cds Length = 1953 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 258 ctaattgttattattattat 239
>ref|XM_001017277.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00196230) mRNA, complete cds Length = 828 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 159 ctaattgttattattattat 140
>ref|XM_001008371.1| Tetrahymena thermophila SB210 Kinesin motor domain containing protein (TTHERM_00014920) mRNA, complete cds Length = 6927 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 6537 attgttattattattatctt 6518
>gb|AC192328.2| Medicago truncatula chromosome 2 BAC clone mth2-55p8, complete sequence Length = 116090 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 42359 ctaattgttattattattat 42378
>emb|CT835056.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA046F09, full insert sequence Length = 636 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gtggacaaccaccatgccat 262 |||||||||||||||||||| Sbjct: 262 gtggacaaccaccatgccat 281
>emb|CR855032.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0102N07, complete sequence Length = 84042 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gtggacaaccaccatgccat 262 |||||||||||||||||||| Sbjct: 43994 gtggacaaccaccatgccat 44013
>dbj|AK243272.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100049L04, full insert sequence Length = 601 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gtggacaaccaccatgccat 262 |||||||||||||||||||| Sbjct: 249 gtggacaaccaccatgccat 268
>emb|CR450847.14| Zebrafish DNA sequence from clone CH211-235J21 in linkage group 12, complete sequence Length = 160423 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 121536 ctaattgttattattattat 121555
>ref|NM_001058733.1| Oryza sativa (japonica cultivar-group) Os04g0188500 (Os04g0188500) mRNA, complete cds Length = 420 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gtggacaaccaccatgccat 262 |||||||||||||||||||| Sbjct: 226 gtggacaaccaccatgccat 245
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 2986968 attgttattattattatctt 2986987 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 17739224 taattgttattattattatc 17739243
>gb|BT027105.1| Gasterosteus aculeatus clone CFW172-H03 mRNA sequence Length = 1612 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 aaaaacattcccacagaagg 504 |||||||||||||||||||| Sbjct: 1557 aaaaacattcccacagaagg 1538
>gb|DQ767826.1| Halocynthia roretzi FGF9/16/20 mRNA, complete cds Length = 1898 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 1846 attgttattattattatctt 1865
>gb|DQ369606.1| Sphaerocanthon occidentalis cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 419 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 296 attgttattattattatctt 315
>ref|NW_001091934.1| Theileria annulata strain Ankara clone C6 Length = 1898942 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 1462880 taattgttattattattatc 1462861
>emb|CR759921.10| Zebrafish DNA sequence from clone DKEY-277D23 in linkage group 25, complete sequence Length = 170745 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 102364 ctaattgttattattattat 102345
>gb|AC186364.3| Gallus gallus BAC clone CH261-30D5 from chromosome z, complete sequence Length = 235005 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 183146 taattgttattattattatc 183127
>emb|CT025774.19| Mouse DNA sequence from clone RP23-362H18 on chromosome 16, complete sequence Length = 221856 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 184679 ctaattgttattattattat 184660
>emb|CR774199.4| Zebrafish DNA sequence from clone CH211-42H24 in linkage group 14, complete sequence Length = 162722 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 aaggaaacttttatgatgtt 619 |||||||||||||||||||| Sbjct: 63325 aaggaaacttttatgatgtt 63306
>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence Length = 216566 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 99392 attgttattattattatctt 99411
>gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosome 10, complete sequence Length = 166313 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 94619 attgttattattattatctt 94600
>ref|XM_632989.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0218722) mRNA, complete cds Length = 8544 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ggtggcagtggtggtgatac 325 |||||||||||||||||||| Sbjct: 1351 ggtggcagtggtggtgatac 1370
>ref|XM_632771.1| Dictyostelium discoideum AX4 ABC transporter B family protein (tagD) mRNA, complete cds Length = 5478 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 4197 attgttattattattatctt 4178
>ref|XM_632714.1| Dictyostelium discoideum AX4 putative actin binding protein (ponB) mRNA, complete cds Length = 438 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 18 attgttattattattatctt 37
>gb|AC129219.3| Mus musculus BAC clone RP24-474C15 from chromosome 14, complete sequence Length = 195935 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 177072 attgttattattattatctt 177091
>gb|AC151757.1| Ornithorhynchus anatinus chromosome UNK clone OABb-457P24, complete sequence Length = 135835 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 120525 attgttattattattatctt 120544
>gb|AC005606.3| Homo sapiens chromosome 16, P1 clone 109-8C (LANL), complete sequence Length = 80662 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 gcagccctaattgttattattatt 434 |||||||||||| ||||||||||| Sbjct: 73587 gcagccctaattattattattatt 73610
>gb|AC004038.1| Homo sapiens chromosome 5, BAC clone 8k5, BAC 5002 (LBNL H102), complete sequence Length = 101615 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 59712 taattgttattattattatc 59693
>gb|AY496809.1| Lysandra coridon borussia AD-00-P192 cytochrome oxidase subunit I (COI) gene, partial cds; tRNA-Leu (trnL) gene, complete sequence; and cytochrome oxidase subunit II (COII) gene, partial cds; mitochondrial Length = 2001 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 292 attgttattattattatctt 311
>gb|AC102052.7| Mus musculus chromosome 3, clone RP23-460F15, complete sequence Length = 175306 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 agaaggaagaagctatgttt 518 |||||||||||||||||||| Sbjct: 113992 agaaggaagaagctatgttt 114011
>gb|AC103406.7| Mus musculus chromosome 9, clone RP23-106O8, complete sequence Length = 174604 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ggtggcagtggtggtgatac 325 |||||||||||||||||||| Sbjct: 63196 ggtggcagtggtggtgatac 63177
>gb|AC008225.4| Drosophila melanogaster clone BACR03E11, complete sequence Length = 174123 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 51657 attgttattattattatctt 51638
>ref|XM_705978.1| Candida albicans SC5314 hypothetical protein (CaO19.1841), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 1038 attgttattattattatctt 1019
>ref|XM_705934.1| Candida albicans SC5314 hypothetical protein (CaO19.9399), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 1038 attgttattattattatctt 1019
>gb|AC158520.2| Mus musculus BAC clone RP23-434P22 from chromosome 14, complete sequence Length = 201291 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gatcaggtggcagtggtggt 320 |||||||||||||||||||| Sbjct: 170842 gatcaggtggcagtggtggt 170861
>gb|AC101902.9| Mus musculus chromosome 1, clone RP24-147M23, complete sequence Length = 223784 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 agtgtcattctctgagactg 356 |||||||||||||||||||| Sbjct: 166543 agtgtcattctctgagactg 166562
>gb|AC147158.3| Pan troglodytes BAC clone CH251-137M10 from Y, complete sequence Length = 167138 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 107431 taattgttattattattatc 107412
>gb|AC146479.2| Pan troglodytes BAC clone CH251-424F5 from Y, complete sequence Length = 163250 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 aaagagccactgaaagcaag 97 |||||||||||||||||||| Sbjct: 79474 aaagagccactgaaagcaag 79455
>gb|AC132588.4| Mus musculus BAC clone RP24-258L16 from chromosome 10, complete sequence Length = 136807 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 61523 attgttattattattatctt 61542
>gb|AC125314.3| Mus musculus BAC clone RP24-361P7 from chromosome 1, complete sequence Length = 121141 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 90849 attgttattattattatctt 90868
>gb|AC122203.4| Mus musculus BAC clone RP23-69J7 from 5, complete sequence Length = 269047 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 atcaggtggcagtggtggtg 321 |||||||||||||||||||| Sbjct: 57976 atcaggtggcagtggtggtg 57957
>gb|AC108773.9| Mus musculus chromosome 5, clone RP23-118L1, complete sequence Length = 222706 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 atcaggtggcagtggtggtg 321 |||||||||||||||||||| Sbjct: 191145 atcaggtggcagtggtggtg 191126
>gb|AC090107.16| Homo sapiens 12 BAC RP11-643D8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 83755 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 14885 ctaattgttattattattat 14866
>gb|AC015658.11| Mus musculus chromosome 1, clone RP23-130F18, complete sequence Length = 177016 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 36397 attgttattattattatctt 36416
>gb|AC111111.11| Mus musculus chromosome 3, clone RP23-201A9, complete sequence Length = 233326 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 agaaggaagaagctatgttt 518 |||||||||||||||||||| Sbjct: 37810 agaaggaagaagctatgttt 37829
>gb|AC102677.9| Mus musculus chromosome 5, clone RP24-67M11, complete sequence Length = 167898 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 133225 attgttattattattatctt 133206
>gb|AE014174.1| Mus musculus piebald deletion region section 2 of 11 of the complete sequence Length = 400029 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gatcaggtggcagtggtggt 320 |||||||||||||||||||| Sbjct: 305946 gatcaggtggcagtggtggt 305965
>emb|CR628387.12| Zebrafish DNA sequence from clone DKEY-59J17 in linkage group 17, complete sequence Length = 220664 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 82149 attgttattattattatctt 82130
>emb|CR792453.9| Zebrafish DNA sequence from clone DKEY-12F6 in linkage group 3, complete sequence Length = 198873 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 7695 ctaattgttattattattat 7676
>ref|XM_961127.1| Plasmodium falciparum 3D7 protein kinase (PFF1145c) partial mRNA Length = 7215 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 ttgttattattattatcttc 440 |||||||||||||||||||| Sbjct: 5696 ttgttattattattatcttc 5677
>gb|AC164572.4| Mus musculus 6 BAC RP24-89J17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 221464 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 119299 attgttattattattatctt 119318
>gb|AC008689.8| Homo sapiens chromosome 5 clone CTB-61G23, complete sequence Length = 138824 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 54069 ctaattgttattattattat 54050
>gb|AC113423.2| Homo sapiens chromosome 5 clone RP11-619L12, complete sequence Length = 123754 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 81274 attgttattattattatctt 81293
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gtggacaaccaccatgccat 262 |||||||||||||||||||| Sbjct: 5954722 gtggacaaccaccatgccat 5954741
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 tattagttgtcttgcttgtcttcgccat 136 |||||||||| || |||||||||||||| Sbjct: 26035916 tattagttgttttccttgtcttcgccat 26035889
>gb|AF466309.1| Dictyostelium discoideum serine protease/ABC transporter TagD (tagD) gene, complete cds Length = 5772 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 4439 attgttattattattatctt 4420
>emb|BX571794.22| Zebrafish DNA sequence from clone DKEY-246M18 in linkage group 15, complete sequence Length = 177616 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 agccctaattgttattattattat 436 |||||||||| ||||||||||||| Sbjct: 38610 agccctaattattattattattat 38587
>dbj|AB095633.1| Parnassius hunningtoni mitochondrial ND5 gene for NADH dehydrogenase subunit 5, partial cds Length = 807 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 aattgttattattattatct 438 |||||||||||||||||||| Sbjct: 71 aattgttattattattatct 90
>dbj|AB072491.1| Solanum lycopersicum var. cerasiforme LecHT-A pseudogene for HT-A protein Length = 426 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 197 attgttattattattatctt 178
>dbj|AB072487.1| Lycopersicon hirsutum f. glabratum LhgHT-B pseudogene for HT-B protein Length = 437 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 276 attgttattattattatctt 257
>gb|AC068620.5| Homo sapiens BAC clone RP11-646I6 from 4, complete sequence Length = 147534 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 53986 ctaattgttattattattat 53967
>emb|AL772182.3| Human DNA sequence from clone RP11-36K22 on chromosome X, complete sequence Length = 161047 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 85113 ctaattgttattattattat 85132
>emb|AL691482.16| Human DNA sequence from clone RP11-510N19 on chromosome 1 Contains the ELF3 gene for E74-like factor 3 (ets domain transcription factor, epithelial-specific), a novel gene, an LSM3 homolog U6 small nuclear RNA associated (S. cerevisiae) (LSM3) pseudogene, an ATPase H+ transporting lysosomal 9kDa V0 subunit e (ATP6V0E) pseudogene and a cysteine-rich protein 1 (intestinal) (CRIP1) pseudogene, complete sequence Length = 112539 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 61926 ctaattgttattattattat 61907
>gb|AC008588.8| Homo sapiens chromosome 5 clone CTC-573M9, complete sequence Length = 213167 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 202036 taattgttattattattatc 202055
>emb|AL354981.41| Human DNA sequence from clone RP11-696J10 on chromosome 9 Contains part of the ASTN2 gene for astrotactin 2 (KIAA0634), complete sequence Length = 117488 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 5868 taattgttattattattatc 5887
>emb|AL356154.13| Human DNA sequence from clone RP11-102H24 on chromosome 10 Contains a replication protein A2 32kDa (RPA2) pseudogene, complete sequence Length = 157722 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 116375 ctaattgttattattattat 116394
>dbj|BS000641.4| Pan troglodytes chromosome Y clone: PTB-094I22, complete sequence Length = 190308 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 38736 taattgttattattattatc 38755
>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the 3' end of the PEX14 gene for peroxisomal biogenesis factor 14, the 3' end of the gene for a novel protein (FLJ34970, FLJ20321, FLJ12223) and two CpG islands, complete sequence Length = 143285 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gatttctcagacaccatgaa 79 |||||||||||||||||||| Sbjct: 23271 gatttctcagacaccatgaa 23252
>emb|AL121675.36|HSJ779E11 Human DNA sequence from clone RP4-779E11 on chromosome 20 Contains the C20orf16 gene for chromosome 20 open reading frame 26, a novel gene, the 3' end of the ADRA1D gene for adrenergic receptor alpha-1D (alpha 1D-adrenoreceptor) and three CpG islands, complete sequence Length = 113168 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 111054 ctaattgttattattattat 111073
>emb|AL109944.19|HSJ737A23 Human DNA sequence from clone RP4-737A23 on chromosome 1p31.2-32.1 Contains part of the DAB1 gene for disabled homolog 1 (Drosophila) and two novel genes, complete sequence Length = 140373 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 131528 ctaattgttattattattat 131547
>gb|AC024132.7| Homo sapiens BAC clone RP11-415C15 from 4, complete sequence Length = 151552 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 atgaaaataagctgctgaagggaa 469 |||||||||||||| ||||||||| Sbjct: 90575 atgaaaataagctgttgaagggaa 90598
>gb|U78045.1|HSU78045 Human collagenase and stromelysin genes, complete cds, and metalloelastase gene, partial cds Length = 81826 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 16778 ctaattgttattattattat 16797
>emb|BX571946.9| Zebrafish DNA sequence from clone DKEY-232H18 in linkage group 22, complete sequence Length = 179796 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 gcagccctaattgttattattatt 434 |||||||||||| ||||||||||| Sbjct: 12817 gcagccctaattattattattatt 12840
>gb|AC022441.5| Homo sapiens chromosome 5 clone RP11-317O24, complete sequence Length = 193057 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aattgttattattattatct 438 |||||||||||||||||||| Sbjct: 14349 aattgttattattattatct 14330
>gb|AC026788.4| Homo sapiens chromosome 5 clone CTD-2164M17, complete sequence Length = 103505 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 aattgttattattattatct 438 |||||||||||||||||||| Sbjct: 100496 aattgttattattattatct 100515
>emb|Z70721.1|SPAC12B10 S.pombe chromosome I cosmid c12B10 Length = 37059 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 31203 attgttattattattatctt 31184
>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5 Length = 348034 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 ttgttattattattatcttc 440 |||||||||||||||||||| Sbjct: 267769 ttgttattattattatcttc 267788
>emb|AL929358.1|PFA929358 Plasmodium falciparum strain 3D7, chromosome 9; segment 4/5 Length = 254050 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ttattattattatcttctgt 443 |||||||||||||||||||| Sbjct: 39458 ttattattattatcttctgt 39439 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 420 attgttattattattatcttctgtacat 447 ||||||||||| ||||| |||||||||| Sbjct: 227951 attgttattatcattattttctgtacat 227924
>gb|AC160409.6| Mus musculus 10 BAC RP23-184O11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209766 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 108529 ctaattgttattattattat 108548
>gb|BT022797.1| Drosophila melanogaster IP13649 full insert cDNA Length = 1823 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 1719 taattgttattattattatc 1738
>emb|BX511135.6| Zebrafish DNA sequence from clone CH211-134D21 in linkage group 5, complete sequence Length = 164976 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 7509 taattgttattattattatc 7490
>emb|CR457462.13| Zebrafish DNA sequence from clone CH211-1O7 in linkage group 13, complete sequence Length = 166823 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ccctaattgttattattatt 434 |||||||||||||||||||| Sbjct: 2811 ccctaattgttattattatt 2792
>gb|DQ018942.1| Curetis bulis cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 980 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 289 attgttattattattatctt 308
>gb|AC132343.3| Mus musculus BAC clone RP24-175J11 from chromosome unknown, complete sequence Length = 166197 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 taattgttattattattatcttct 441 ||||| |||||||||||||||||| Sbjct: 118302 taatttttattattattatcttct 118325
>gb|AC146595.2| Mus musculus BAC clone RP24-164G18 from chromosome 17, complete sequence Length = 132103 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 ttgttattattattatcttctgta 444 ||||||||||||||||| |||||| Sbjct: 55572 ttgttattattattatcatctgta 55549
>gb|AC008029.3|AC008029 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone BACR01C11, complete sequence Length = 176991 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 23573 attgttattattattatctt 23592
>gb|AC008091.6|AC008091 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone BACR08K01, complete sequence Length = 175781 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 53496 taattgttattattattatc 53515
>gb|AC079776.5| Homo sapiens BAC clone RP11-315H12 from 2, complete sequence Length = 198961 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 120074 ctaattgttattattattat 120055
>dbj|BS000643.3| Pan troglodytes chromosome Y clone: PTB-307J21, complete sequence Length = 147286 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 aaagagccactgaaagcaag 97 |||||||||||||||||||| Sbjct: 105041 aaagagccactgaaagcaag 105022
>dbj|BS000634.2| Pan troglodytes chromosome Y clone: PTB-592K24, complete sequence Length = 170276 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 129271 taattgttattattattatc 129290
>dbj|BS000632.2| Pan troglodytes chromosome Y clone: PTB-399O20, complete sequence Length = 199770 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 aaagagccactgaaagcaag 97 |||||||||||||||||||| Sbjct: 4677 aaagagccactgaaagcaag 4658
>gb|AC004772.2|AC004772 Homo sapiens chromosome Y, clone hCIT.144_J_1, complete sequence Length = 112999 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 109698 taattgttattattattatc 109679
>gb|AC004617.2|AC004617 Homo sapiens chromosome Y, clone 264,M,20, complete sequence Length = 175223 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aaagagccactgaaagcaag 97 |||||||||||||||||||| Sbjct: 171595 aaagagccactgaaagcaag 171614
>gb|AF442142.1| Solanum tuberosum style-specific self-incompatibility putative modifier protein HT-A1 pseudogene, partial sequence Length = 988 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 797 attgttattattattatctt 778
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 426 attattattatcttctgtacatga 449 |||||||||||||| ||||||||| Sbjct: 52722 attattattatcttttgtacatga 52699
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 tattagttgtcttgcttgtcttcgccat 136 |||||||||| || |||||||||||||| Sbjct: 43362 tattagttgttttccttgtcttcgccat 43335
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 tattagttgtcttgcttgtcttcgccat 136 |||||||||| || |||||||||||||| Sbjct: 99789 tattagttgttttccttgtcttcgccat 99762
>gb|AC018865.4| Homo sapiens BAC clone RP11-32C20 from 2, complete sequence Length = 165411 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 3872 ctaattgttattattattat 3853
>emb|AL929261.27| Zebrafish DNA sequence from clone CH211-245H5 in linkage group 24, complete sequence Length = 193600 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 136195 ctaattgttattattattat 136214
>ref|XM_950273.1| Theileria annulata strain Ankara hypothetical protein (TA17650) partial mRNA Length = 11265 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 8369 taattgttattattattatc 8350
>gb|AC008831.7|AC008831 Homo sapiens chromosome 5 clone CTD-2146K10, complete sequence Length = 144722 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aattgttattattattatct 438 |||||||||||||||||||| Sbjct: 11701 aattgttattattattatct 11682
>emb|BX119996.7| Mouse DNA sequence from clone RP23-352G15 on chromosome X, complete sequence Length = 191635 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 taattgttattattattatcttct 441 ||||| |||||||||||||||||| Sbjct: 175748 taatttttattattattatcttct 175725
>emb|BX530092.15| Mouse DNA sequence from clone RP23-45N17 on chromosome X, complete sequence Length = 136088 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 25634 ctaattgttattattattat 25615
>gb|AC117622.10| Mus musculus chromosome 5, clone RP23-114L5, complete sequence Length = 185368 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 26837 attgttattattattatctt 26818
>emb|BX005478.7| Zebrafish DNA sequence from clone CH211-77G9, complete sequence Length = 152152 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ttattattattatcttctgt 443 |||||||||||||||||||| Sbjct: 104971 ttattattattatcttctgt 104952
>emb|BX537253.6| Mouse DNA sequence from clone RP24-173B15 on chromosome 2, complete sequence Length = 161021 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 taattgttattattattatcttct 441 ||||| |||||||||||||||||| Sbjct: 103640 taatttttattattattatcttct 103663
>emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on chromosome 11, complete sequence Length = 213263 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 19762 attgttattattattatctt 19781
>emb|BX005015.5| Zebrafish DNA sequence from clone CH211-66I11 in linkage group 9, complete sequence Length = 172283 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 ttattattattatcttctgt 443 |||||||||||||||||||| Sbjct: 57054 ttattattattatcttctgt 57073
>emb|AL929023.3| Zebrafish DNA sequence from clone DKEY-98G12 in linkage group 17, complete sequence Length = 198736 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 15359 attgttattattattatctt 15340
>emb|AL953846.6| Zebrafish DNA sequence from clone CH211-244D10, complete sequence Length = 153939 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 428 tattattatcttctgtacatgaaaataa 455 ||||||||||| |||||||| ||||||| Sbjct: 25008 tattattatctactgtacattaaaataa 25035
>gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2552H2 containing neurexin III gene, partial cds, complete sequence Length = 188078 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 10177 ctaattgttattattattat 10158
>gb|AC007056.4|AC007056 Homo sapiens clone from human chromosome 14q31 region containing gene for neurexin III, partial CDS, complete sequence Length = 182481 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 181877 ctaattgttattattattat 181858
>gb|AC157016.3| Mus musculus 10 BAC RP24-505M19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168538 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 103898 ctaattgttattattattat 103917
>dbj|AP000647.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-75I23, complete sequence Length = 118818 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 103715 ctaattgttattattattat 103734
>dbj|AP000619.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-42C6, complete sequence Length = 103181 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 54493 ctaattgttattattattat 54512
>gb|AC005971.5|AC005971 Homo sapiens chromosome 17, clone hRPK.651_L_9, complete sequence Length = 192307 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 163179 ctaattgttattattattat 163198
>ref|XM_671857.1| Plasmodium berghei strain ANKA hypothetical protein (PB000704.03.0) partial mRNA Length = 1311 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tattattattatcttctgta 444 |||||||||||||||||||| Sbjct: 238 tattattattatcttctgta 219
>emb|BX470230.5| Zebrafish DNA sequence from clone CH211-284B12 in linkage group 4, complete sequence Length = 173564 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 taattgttattattattatc 437 |||||||||||||||||||| Sbjct: 89067 taattgttattattattatc 89048
>emb|AJ009616.3|HSAJ9616 Homo sapiens chromosome 17 sequence from PAC RP1-188B3 region D17S842-D17S953 map 17p11.2, complete sequence Length = 81514 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ctaattgttattattattat 436 |||||||||||||||||||| Sbjct: 36900 ctaattgttattattattat 36919
>gb|AC148982.4| Mus musculus BAC clone RP23-174I22 from 1, complete sequence Length = 195580 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 45880 attgttattattattatctt 45861
>emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0045O17, complete sequence Length = 137981 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gtggacaaccaccatgccat 262 |||||||||||||||||||| Sbjct: 97959 gtggacaaccaccatgccat 97978
>emb|AL672299.14| Mouse DNA sequence from clone RP23-287A19 on chromosome X, complete sequence Length = 131629 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 ttattattattatcttctgtacat 447 |||||||||||||| ||||||||| Sbjct: 101520 ttattattattatcatctgtacat 101543
>gb|AY557132.1| Lysandra caelestissimus voucher OK96022 cytochrome oxidase subunit I (coI) gene, partial cds; mitochondrial Length = 672 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 552 attgttattattattatctt 571
>gb|AY556965.1| Lysandra coridon voucher MW01116 cytochrome oxidase subunit I (coI) gene, partial cds; mitochondrial Length = 690 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 570 attgttattattattatctt 589
>gb|AC155326.8| Mus musculus 6 BAC RP24-72P18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 184159 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 10038 attgttattattattatctt 10019
>dbj|AP003355.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1517D11 Length = 153728 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 34687 attgttattattattatctt 34706
>dbj|AB072488.1| Solanum pimpinellifolium LpmHT-A pseudogene for HT-A protein Length = 403 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 197 attgttattattattatctt 178
>dbj|AB066584.1| Solanum lycopersicum pseudogene for HT-protein LeHT-A Length = 1001 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 797 attgttattattattatctt 778
>dbj|AB066583.1| Solanum peruvianum LpHT-B mRNA for HT-protein LpHT-B, complete cds Length = 413 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 attgttattattattatctt 439 |||||||||||||||||||| Sbjct: 281 attgttattattattatctt 262 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 128,676,683 Number of extensions: 8574707 Number of successful extensions: 247237 Number of sequences better than 10.0: 159 Number of HSP's gapped: 247237 Number of HSP's successfully gapped: 162 Length of query: 667 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 645 Effective length of database: 18,508,616,841 Effective search space: 11938057862445 Effective search space used: 11938057862445 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
