>Q6C961:XRN2_YARLI 5'-3' exoribonuclease 2 - Yarrowia lipolytica (Candida lipolytica)|
          Length = 1010
 Score = 37.0 bits (84), Expect = 0.21
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 880  SSRGSYGEAHRGYASGRYESFGERPDYP--EFHGGGQGRDLGFEHRGQYPGGRAYNSGG 1050
            +SRG YG    GY  G  + +G    Y   + +GGGQG        G Y GG+ Y  GG
Sbjct: 935  NSRGGYGGGGGGYGGGGGQGYGGGQGYGGGQGYGGGQGYG-----GGGYGGGQGYGGGG 988

>P24271:RAG1_CHICK V(D)J recombination-activating protein 1 - Gallus gallus (Chicken)|
          Length = 1041

 Score = 37.0 bits (84), Expect = 0.21
 Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
 Frame = +2

Query: 377 NIPNQIS-PYA-YNEGQNAEGKRSFYDGQPSDLKVGLEKQPRKELRDQTHTDKIEARHDD 550
           ++P +I  PYA ++E +    K   +  +PSD    + K   +E+     TDK    H D
Sbjct: 8   DLPEEIQHPYAKFSEWKFKLFKVRPFQKEPSDKSQCINKDQEQEVAS---TDKNITLHKD 64

Query: 551 YNLPRTFESL--EQSFREDIVVLSKELNDAEDAENTRHRERLNEI 679
             +PR  + +  ++ F  +   L K++ND +  +NT H+  L ++
Sbjct: 65  EEVPRGEKLILTQKDFMGNTQALEKDVNDMKIQDNTAHQNNLKQL 109

>Q80WE4:MPPH1_MOUSE M-phase phosphoprotein 1 - Mus musculus (Mouse)|
          Length = 1774

 Score = 37.0 bits (84), Expect = 0.21
 Identities = 22/80 (27%), Positives = 40/80 (50%)
 Frame = +2

Query: 503  LRDQTHTDKIEARHDDYNLPRTFESLEQSFREDIVVLSKELNDAEDAENTRHRERLNEIN 682
            L+ + +  + EA+H D+       + E  FRE++  L+  L+D +    ++  E  NEI+
Sbjct: 1149 LKLEANLKECEAKHQDHIRTNDLSAKEVKFREEVTRLANNLHDTKQLLQSKEEE--NEIS 1206

Query: 683  AQYHEKLLALRARQTAIEKN 742
             Q  EKL    A  + + +N
Sbjct: 1207 RQETEKLKEELAANSILTQN 1226

>O74555:BBP_SCHPO Branchpoint-bridging protein - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 587

 Score = 36.6 bits (83), Expect = 0.27
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
 Frame = +2

Query: 398 PYAYNEGQNAEGKRSFYDGQPSDLKVGLEKQPRKELRDQTHTDKIEARHDDYNLPRTFES 577
           P  Y++G+     R  Y G P+ ++  L  Q   EL     +     + + Y+L    E 
Sbjct: 56  PDGYHDGRGRRAYRKHYWGHPTPIEEMLPSQ--MELETAVKSCMTMEQLELYSLNVRLEE 113

Query: 578 LEQSFRE-DIVVLSKELNDAEDAENTRHRERLNEINAQYHEKLLALRARQTAIEKNSCAK 754
           + Q  R  D+V   +E + +   +   H  RLN    +Y +KL   R R   IE+     
Sbjct: 114 ITQKLRTGDVVPHHRERSPSPPPQYDNHGRRLNTREIRYKKKLEDERHR--IIERAMKMV 171

Query: 755 SLWNANSNTKRPA 793
             + A S+ +RPA
Sbjct: 172 PGFRAPSDYRRPA 184

>Q9HGI8:ERF2_KLULA Eukaryotic peptide chain release factor GTP-binding subunit -|
           Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 700

 Score = 35.0 bits (79), Expect = 0.79
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
 Frame = +2

Query: 245 YQAQQRVQQLPDNSYPGRDPGQAAGENQYTAQKARQSQWD--RGG------PNIPNQISP 400
           YQA Q   Q P  +Y G +P QA G   Y    A+Q  ++  +GG       N  N+ S 
Sbjct: 46  YQAYQAYGQQPQGAYQGYNPQQAQGYQPYQGYNAQQQGYNAQQGGHNNNYNKNYNNKNSY 105

Query: 401 YAYNEGQNAEGKRSFYDGQPS 463
             YN+ Q  +G + +   QP+
Sbjct: 106 NNYNK-QGYQGAQGYNAQQPT 125

>O95613:PCNT_HUMAN Pericentrin - Homo sapiens (Human)|
          Length = 3336

 Score = 34.7 bits (78), Expect = 1.0
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +2

Query: 473 VGLEKQPRKELRDQTHTDKIEARHDDYNLPRTFESLEQSFREDIVVLSKEL 625
           VGLE++P K  +D  H D++E      +LPR    LE+S R  +  L   L
Sbjct: 564 VGLEEKPEKGRKD--HVDELEPERHKESLPRFQAELEESHRHQLEALESPL 612

>Q9QXL1:KI21B_MOUSE Kinesin-like protein KIF21B - Mus musculus (Mouse)|
          Length = 1668

 Score = 34.3 bits (77), Expect = 1.4
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
 Frame = +2

Query: 434 KRSFYDGQPSDLKVGLEKQPRKELRDQTHTDKIEARHDDYNLPRTFESL----------E 583
           KR+    + S+     E +  +E RD++  ++ E R D+     + ESL          E
Sbjct: 571 KRAKLQAENSEETDENEAEEEEEERDESGCEEEEGREDEDEDSGSEESLVDSDSDPEEKE 630

Query: 584 QSFREDIVVLSKELNDAEDA--ENTRHRERLNEINAQYHEKLLAL--RARQTAIEKNSCA 751
            +F+ D+  L+ E+   +    E    + RL  +  QY EKL+ L  + R T +E++   
Sbjct: 631 VNFQADLADLTCEIEIKQKLIDELENSQRRLQTLKHQYEEKLILLQNKIRDTQLERDRVL 690

Query: 752 KSLWNANSNTKRPA 793
           ++L      T+  A
Sbjct: 691 QNLSTMECYTEEKA 704

>O75037:KI21B_HUMAN Kinesin-like protein KIF21B - Homo sapiens (Human)|
          Length = 1637

 Score = 33.9 bits (76), Expect = 1.8
 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
 Frame = +2

Query: 482 EKQPRKELRDQTHTDKIEARHDDYNLPRTFESL----------EQSFREDIVVLSKELND 631
           E +  +E RD++  ++ E R D+     + ESL          E +F+ D+  L+ E+  
Sbjct: 586 EAEEEEEERDESGCEEEEGREDEDEDSGSEESLVDSDSDPEEKEVNFQADLADLTCEIEI 645

Query: 632 AEDA--ENTRHRERLNEINAQYHEKLLAL--RARQTAIEKNSCAKSLWNANSNTKRPA 793
            +    E    + RL  +  QY EKL+ L  + R T +E++   ++L      T+  A
Sbjct: 646 KQKLIDELENSQRRLQTLKHQYEEKLILLQNKIRDTQLERDRVLQNLSTMECYTEEKA 703

>Q0CLJ6:DED1_ASPTN ATP-dependent RNA helicase ded1 - Aspergillus terreus (strain NIH|
           2624)
          Length = 674

 Score = 33.5 bits (75), Expect = 2.3
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 889 GSYGEAHRGYASGRYESFGERPDYPEFHGGGQG 987
           G YG    GY+SG   SFG  P Y   +GGG G
Sbjct: 625 GGYGGGAGGYSSGGGGSFGGAPSYGGGYGGGYG 657

>P21463:TSHR_RAT Thyrotropin receptor precursor - Rattus norvegicus (Rat)|
          Length = 764

 Score = 33.1 bits (74), Expect = 3.0
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
 Frame = -3

Query: 575 FQMYEEDY--SHRALLQSYRYESGPSIPFLVAFLDQPSDQMVVHHKRIVYPQH-----FD 417
           +Q YEE    +H    Q+ +++ GPS      F ++  D+++   + +  PQ      FD
Sbjct: 323 YQEYEEGLGDNHVGYKQNSKFQEGPSNSHYYVFFEEQEDEIIGFGQELKNPQEETLQAFD 382

Query: 416 PHYMHMVKSDS 384
            HY + V  D+
Sbjct: 383 SHYDYTVCGDN 393

>Q08473:SQD_DROME RNA-binding protein squid - Drosophila melanogaster (Fruit fly)|
          Length = 344

 Score = 33.1 bits (74), Expect = 3.0
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = +1

Query: 883  SRGSYGEAHRGYASGRYESFGERPDYPEFHGG--GQGRDLGFEHRGQYPGGRAYNSGGRR 1056
            S G YG  + GY +G Y  +     Y  +  G  G G   GFE  G Y GG   N GG R
Sbjct: 253  SYGGYGGGYGGYGAGGYGDYYAGGYYNGYDYGYDGYGYGGGFEGNG-YGGGGGGNMGGGR 311

>Q6GH25:OPPB2_STAAR Putative oligopeptide transport system permease protein oppB2 -|
           Staphylococcus aureus (strain MRSA252)
          Length = 328

 Score = 33.1 bits (74), Expect = 3.0
 Identities = 26/79 (32%), Positives = 40/79 (50%)
 Frame = -1

Query: 454 SIIKGSFTLSILTLIICIW*NLIRDIRSTPVPLALSRLLGGILVLPSSLPRISSRVTIIR 275
           S+I   F L +LTL + +   +IR +RS      L  LL   +V  S L  ++ R  +I 
Sbjct: 168 SVILSQFILPVLTLSLGMCAYIIRLVRSN-----LLILLKSNIVQASRLRGMNERYILIH 222

Query: 274 ELLNPLLSLVVMQLGRSHG 218
           +LL P +  ++  LG S G
Sbjct: 223 DLLKPTILPIIPLLGISLG 241

>Q03251:GRP8_ARATH Glycine-rich RNA-binding protein 8 - Arabidopsis thaliana (Mouse-ear|
            cress)
          Length = 169

 Score = 33.1 bits (74), Expect = 3.0
 Identities = 23/57 (40%), Positives = 24/57 (42%)
 Frame = +1

Query: 886  RGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRR 1056
            RG  G  +R    G Y S G    Y    GGG  R  G    G   GGR Y  GGRR
Sbjct: 94   RGGSGGGYRSGGGGGY-SGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGGRR 149

>P23637:ERF2_PICPI Eukaryotic peptide chain release factor GTP-binding subunit - Pichia|
            pinus (Yeast)
          Length = 741

 Score = 33.1 bits (74), Expect = 3.0
 Identities = 24/113 (21%), Positives = 38/113 (33%), Gaps = 17/113 (15%)
 Frame = +1

Query: 769  QQQYQKASISNYANNV-----------------VPREPRGYXXXXXXXXXXXXXSSRGSY 897
            QQQ Q+ + +N A NV                 +P   + +                G Y
Sbjct: 5    QQQQQQFNANNLAGNVQNINLNAPAYDPAVQSYIPNTAQAFVPSAQPYIPGQQEQQFGQY 64

Query: 898  GEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRR 1056
            G+  + Y  G Y ++  R  Y    GG         +RG Y    +YN+   +
Sbjct: 65   GQQQQNYNQGGYNNYNNRGGYSNNRGGYNN-----SNRGGYSNYNSYNTNSNQ 112

>P22793:TRHY_SHEEP Trichohyalin - Ovis aries (Sheep)|
          Length = 1549

 Score = 32.7 bits (73), Expect = 3.9
 Identities = 20/75 (26%), Positives = 36/75 (48%)
 Frame = +2

Query: 482 EKQPRKELRDQTHTDKIEARHDDYNLPRTFESLEQSFREDIVVLSKELNDAEDAENTRHR 661
           E+Q R++ R++ + +K+E + ++  L R      +  RE   +   EL + E  +     
Sbjct: 580 ERQKRRQEREKQYLEKVELQEEE-QLQRQEREKRRQERERQYLEKVELQEEEQVQRQERE 638

Query: 662 ERLNEINAQYHEKLL 706
           +R  E   QY EK L
Sbjct: 639 KRRQERERQYLEKEL 653

>Q1KKW8:HXB1B_FUGRU Homeobox protein Hox-B1b - Fugu rubripes (Japanese pufferfish)|
           (Takifugu rubripes)
          Length = 280

 Score = 32.7 bits (73), Expect = 3.9
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +2

Query: 227 SSQLHHYQAQQRVQQLPDNSYPGRDPGQAAGENQYTAQKARQSQWDRGGPNIP 385
           S  LH    +QR+Q+ PDN Y  R P Q+  E+++  +  +   W +   N P
Sbjct: 130 SQYLHFGNGEQRLQEYPDNVY-ARLPPQSKKESEHVEETCKTFDWMKVKRNPP 181

>Q59LU0:DBP2_CANAL ATP-dependent RNA helicase DBP2 - Candida albicans (Yeast)|
          Length = 562

 Score = 32.7 bits (73), Expect = 3.9
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +1

Query: 883  SRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHR--GQYPGGRAYNSGGR 1053
            + G Y   + G   G Y   G R     + GGG+G   G   R  G Y GGR ++ GGR
Sbjct: 4    NNGGYNNRNGGSYGGGYGGGGSRGGRDGYSGGGRGGGYGGGDRDQGGYRGGR-FSGGGR 61

>Q4R7D5:CO033_MACFA Uncharacterized protein C15orf33 homolog - Macaca fascicularis|
           (Crab eating macaque) (Cynomolgus monkey)
          Length = 392

 Score = 32.7 bits (73), Expect = 3.9
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
 Frame = +2

Query: 554 NLPRTFESL---EQSFREDIVVLSKELNDA-------EDAENTRHRERLNEINAQYHEKL 703
           N+PR FE+L   E   +E  ++L    +          +  + R  ER  E   +YH+K 
Sbjct: 73  NVPRIFEALLIMESKLKEYSLILQNHTSKIFKWKSMISETSSYRKLERYGEFLKKYHKKK 132

Query: 704 LALRARQTAIEKN--SCAKSLWNANSNTKRP 790
             + + +   EKN   C+ + + AN  TK P
Sbjct: 133 KIMLSDEMETEKNIEGCSFTGFKANELTKLP 163

>P10496:GRP2_PHAVU Glycine-rich cell wall structural protein 1.8 precursor - Phaseolus|
            vulgaris (Kidney bean) (French bean)
          Length = 465

 Score = 32.3 bits (72), Expect = 5.1
 Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +1

Query: 889  GSYGEAHRGYASGRYESFGERPD-YPEFHGGGQGRDLGF--EHRGQYPGGRAYNSGG 1050
            G  G    G A G Y + GE    Y    GGG G   G   EH G Y GG+   +GG
Sbjct: 317  GGGGGGQGGGAGGGYAAVGEHGGGYGGGQGGGDGGGYGTGGEHGGGYGGGQGGGAGG 373

>Q96M60:CO033_HUMAN Uncharacterized protein C15orf33 - Homo sapiens (Human)|
          Length = 508

 Score = 32.3 bits (72), Expect = 5.1
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
 Frame = +2

Query: 554 NLPRTFESL---EQSFREDIVVLSKELNDA-------EDAENTRHRERLNEINAQYHEKL 703
           N+PR FE+L   E   +E  ++L    ++         +  + R  ER  E   +YH+K 
Sbjct: 73  NVPRIFEALLIMESKLKEYSLILQNHTSEIFKWKSMISETSSYRKLERYGEFLKKYHKKK 132

Query: 704 LALRARQTAIEKN--SCAKSLWNANSNTKRP 790
             + + +   EKN   C+ + + AN  T+ P
Sbjct: 133 KIMLSDEMETEKNIEGCSFTGFKANELTQLP 163

>Q09227:YP89_CAEEL Uncharacterized protein C08B11.9 - Caenorhabditis elegans|
          Length = 186

 Score = 32.0 bits (71), Expect = 6.7
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = +2

Query: 530 IEARHDDYNLPRTFESLEQSFREDIVVLSKELNDAEDAENTRHRERLNEINAQYHEKLLA 709
           +++R +D  L  +    ++   +D+V L+ +LN A      R  +RL +I  Q  +  +A
Sbjct: 22  VQSRSEDQRLVTSARQTDKIDADDLVALANQLNSARQLVKGRACDRLKQIADQMEQLHMA 81

Query: 710 LRA 718
            RA
Sbjct: 82  ARA 84

>Q9VDS6:SURF6_DROME Surfeit locus protein 6 homolog - Drosophila melanogaster (Fruit|
           fly)
          Length = 324

 Score = 32.0 bits (71), Expect = 6.7
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
 Frame = +2

Query: 401 YAYNEGQNAEGKRSFYDGQPSDLKVGLEKQPRKELRDQTHTDKIEARHDDYNLPRTFESL 580
           +A N G  A  K+S  + +    K+   K+   ELR+Q  TDK      D      F+ +
Sbjct: 190 FAANPGGKA--KKSHQNPKEILKKLRDTKKHLTELREQGETDKAAEIQTDIAWRNAFDKV 247

Query: 581 E-QSFREDIVVLSKELND---AEDAENTRHRERLNEINAQYHEKLLALRARQTAIEKNSC 748
           E +  ++D  +L K +      +    T+  ER  ++    H+K    + RQ  +EK S 
Sbjct: 248 EGKKVKDDTKLLQKAIKKRRVEKKKSKTKWTERKQKVE---HDKEKRQKKRQENLEKRSK 304

Query: 749 AKSLWNANSNTKR 787
            K      + +KR
Sbjct: 305 DKKNRKLKTASKR 317

>P51989:RO21_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 1 - Xenopus laevis|
            (African clawed frog)
          Length = 346

 Score = 32.0 bits (71), Expect = 6.7
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +1

Query: 886  RGSYGEAHRGYASGRYE-SFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRRF 1059
            RG     + GY  G+   ++G  P Y    GGG G   G+ ++G   GG   N GG  +
Sbjct: 225  RGYGDNGYNGYGGGQGGGNYGGGPSYGGGRGGGYGGGAGYGNQGGGYGGGYDNYGGGNY 283

>Q6H7S2:RH8_ORYSJ DEAD-box ATP-dependent RNA helicase 8 - Oryza sativa subsp.|
           japonica (Rice)
          Length = 508

 Score = 32.0 bits (71), Expect = 6.7
 Identities = 34/121 (28%), Positives = 45/121 (37%), Gaps = 10/121 (8%)
 Frame = +2

Query: 233 QLHHYQAQQRVQQLPDNSYPGRDPGQAAGENQYTAQKARQSQWDRGGPNIPNQISPYAYN 412
           Q H++  QQ+        Y  R P Q    N +   + +Q QW R      NQI+  A  
Sbjct: 30  QQHNHHQQQQTSAPHHQQYVQRQPQQHHHHNHHQQHQQQQQQWLR-----RNQIAREAAG 84

Query: 413 EGQNAEGKR-------SFYDGQPSDLKVGLEKQP---RKELRDQTHTDKIEARHDDYNLP 562
             +N+E K           D    D K  L+  P   R    D T T   E   +DY L 
Sbjct: 85  TDRNSEPKAVAQSPAVDGIDSSSQDWKAQLKLPPQDTRYRTEDVTATKGNE--FEDYFLK 142

Query: 563 R 565
           R
Sbjct: 143 R 143


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 227,211,309
Number of extensions: 4913149
Number of successful extensions: 16060
Number of sequences better than 10.0: 24
Number of HSP's gapped: 15989
Number of HSP's successfully gapped: 24
Length of query: 484
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 367
Effective length of database: 68,593,924
Effective search space: 25173970108
Effective search space used: 25173970108
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)