| Clone Name | FLbaf108k03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102859:Os08g0528700 | 30 | 1.3 | 2 | Os10g0171400:Os10g0171400 | 28 | 3.8 | 3 | Os01g0819400:Os01g0819400 | 28 | 6.6 | 4 | Os01g0303300:Os01g0303300 | 28 | 6.6 | 5 | AK101592:Os11g0175500 | 28 | 6.6 | 6 | AK064320:Os11g0175500 | 28 | 6.6 |
|---|
>AK102859:Os08g0528700 | Length = 187 Score = 30.0 bits (66), Expect = 1.3 Identities = 33/93 (35%), Positives = 35/93 (37%), Gaps = 11/93 (11%) Frame = +3 Query: 42 SSPPLKVVYSPSS----HPPRELRRSPAHIHGRGGRE*WHMHAHVSWRVRKGLFSAPPFM 209 S PP + SPSS P R RS HG A S SA P Sbjct: 62 SPPPSRTRCSPSSPGSASPARTSPRSSPPSHGSSAPR---RPASPSASPPSATASACPTP 118 Query: 210 RPTPAS-------RRSWTARWPLGSSRRMPLWD 287 R +PAS R S A WP GSS P WD Sbjct: 119 R-SPASSSCPAAPRASTHATWPRGSSSGSPSWD 150
>Os10g0171400:Os10g0171400 | Length = 179 Score = 28.5 bits (62), Expect = 3.8 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +3 Query: 54 LKVVYSPSSHPPRE-LRRSPAHIHGRGGRE*WHMHAH 161 ++ V + S+ RE L+R+ A I GRGG + WH H Sbjct: 73 VRAVVAMSADAAREILQRNNADITGRGGMDSWHACGH 109
>Os01g0819400:Os01g0819400 | Length = 368 Score = 27.7 bits (60), Expect = 6.6 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +3 Query: 174 VRKGLFSAPPFMRPTPASRRSWTARWPLGSSRRMP 278 V +G S PP RP P SW P S R +P Sbjct: 274 VVEGCLSVPPLDRPLPLRPASWPLVPPAKSPRDLP 308
>Os01g0303300:Os01g0303300 | Length = 263 Score = 27.7 bits (60), Expect = 6.6 Identities = 24/90 (26%), Positives = 38/90 (42%) Frame = +3 Query: 30 PSYFSSPPLKVVYSPSSHPPRELRRSPAHIHGRGGRE*WHMHAHVSWRVRKGLFSAPPFM 209 P++ + P + +P PP L RSP H R H+ A + RVR+ Sbjct: 41 PTHVALLPRPLYTNPRQPPPSRLHRSPPHPPPPPLRR-THVAARLVERVRR--------- 90 Query: 210 RPTPASRRSWTARWPLGSSRRMPLWDYGGP 299 R + + +WT + + S + L D G P Sbjct: 91 RMSSSRLDTWTLKEEVASMDKRWLVDLGHP 120
>AK101592:Os11g0175500 | Length = 478 Score = 27.7 bits (60), Expect = 6.6 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = +1 Query: 274 CPCGTTAVQDVPGRGRNNSTHNNIDRWIQAFMGWARS 384 CP TAVQ V GRN+ HN + +QAF RS Sbjct: 189 CPQCRTAVQSV---GRNHFLHNIEEAILQAFSSLQRS 222
>AK064320:Os11g0175500 | Length = 508 Score = 27.7 bits (60), Expect = 6.6 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = +1 Query: 274 CPCGTTAVQDVPGRGRNNSTHNNIDRWIQAFMGWARS 384 CP TAVQ V GRN+ HN + +QAF RS Sbjct: 189 CPQCRTAVQSV---GRNHFLHNIEEAILQAFSSLQRS 222 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 19,707,395 Number of extensions: 497810 Number of successful extensions: 1550 Number of sequences better than 10.0: 6 Number of HSP's gapped: 1548 Number of HSP's successfully gapped: 6 Length of query: 210 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 114 Effective length of database: 11,555,919 Effective search space: 1317374766 Effective search space used: 1317374766 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)