ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf108j06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072514:Os07g0661000 | 613 | e-175 | 2 | Os02g0161700:Os02g0161700 | 33 | 0.62 | 3 | AK068809:Os04g0647900 | 33 | 0.62 | 4 | AK098912:Os07g0150100 | 32 | 1.4 | 5 | AK065241:Os07g0150100 | 32 | 1.4 | 6 | Os10g0469600:Os10g0469600 | 31 | 2.4 | 7 | Os02g0154700:Os02g0154700 | 30 | 5.2 | 8 | AK106864:Os08g0164300 | 30 | 5.2 | 9 | AK100376:Os02g0153700 | 29 | 6.8 | 10 | AY180331:Os05g0150600 | 29 | 8.9 | 11 | AK100489:Os06g0704400 | 29 | 8.9 | 12 | AK072977:Os05g0150600 | 29 | 8.9 | 13 | AK072783:Os07g0568000 | 29 | 8.9 | 14 | AK069485:Os07g0568000 | 29 | 8.9 | 15 | AK069477:Os06g0704400 | 29 | 8.9 | 16 | AK063338:Os05g0150600 | 29 | 8.9 | 17 | AK062169:Os06g0704400 | 29 | 8.9 | 18 | AK060865:Os06g0708500 | 29 | 8.9 |
|---|
>AK072514:Os07g0661000 | Length = 368 Score = 613 bits (1580), Expect = e-175 Identities = 307/359 (85%), Positives = 330/359 (91%), Gaps = 4/359 (1%) Frame = +3 Query: 120 EAEKEM--RAWCVALPKVELHAHLNGSVRNSTLLELAKELGDKGVIVYEDVKDVIMKNDR 293 EAEKEM R WCVALPKVELHAHLNGSVR+STLLELAK+LGDKG IV+EDVKDVIMKN R Sbjct: 2 EAEKEMSMREWCVALPKVELHAHLNGSVRDSTLLELAKQLGDKGDIVFEDVKDVIMKNGR 61 Query: 294 SLPECFRLFDLFHILTTDHDTVTRIAKEVIGDFAAENVVYLEIRTTPKNNEAKGMTKRSY 473 SLPECFRLF+L+HILTTDHDTVTRI KEV+ DFA ENVVYLEIRTTPKNNEAKGMTKRSY Sbjct: 62 SLPECFRLFELYHILTTDHDTVTRITKEVVEDFAMENVVYLEIRTTPKNNEAKGMTKRSY 121 Query: 474 MNAVVKGLKSVEDVDVVLNDE--KISCAPMSDFGGDTKRKKIYVRLLLSIDRRETTSAAL 647 MNAV+KGLK+VE V+VVL D + PMS+ GGDT++KKIYVRLLLSIDRRETT AAL Sbjct: 122 MNAVIKGLKTVEAVEVVLFDSNSRADKTPMSELGGDTRKKKIYVRLLLSIDRRETTLAAL 181 Query: 648 DTVNLALELKDEGVIGIDLSGNPVVGEWETYLPALERAKELGIPTTIHCGEVPNRKEIQA 827 DTVNLA+E+KD+GVIGIDLSGNPVVGEWETYLPALE AKELGIP TIHCGEV NR EI+A Sbjct: 182 DTVNLAMEMKDQGVIGIDLSGNPVVGEWETYLPALEHAKELGIPITIHCGEVANRNEIRA 241 Query: 828 MLDFCPQRLGHVCCLDDEEWKKLKSSMIPVEICLTSNVMTGGTPSLELHHFADLYNAKHP 1007 +LDFCPQRLGHVCCL+DEEWKKLKS MIPVEICLTSNVMTGG PSLELHHFADLYNAKHP Sbjct: 242 VLDFCPQRLGHVCCLNDEEWKKLKSLMIPVEICLTSNVMTGGAPSLELHHFADLYNAKHP 301 Query: 1008 LSICTDDSGLFSTSLSNEYYLVASTFGLSKAELFRLAQSAVEFVFADDEVKKSLRAAFE 1184 LS+CTDDSGLFSTSLSNEYYLVASTFGLSKAELF+LAQ AVEFVFA DE+K+SLR FE Sbjct: 302 LSLCTDDSGLFSTSLSNEYYLVASTFGLSKAELFQLAQDAVEFVFAGDELKRSLRELFE 360
>Os02g0161700:Os02g0161700 | Length = 735 Score = 32.7 bits (73), Expect = 0.62 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 9/133 (6%) Frame = +3 Query: 675 KDEGVIGIDLSGNPVVGEWETYLPALERAKELGIPTTIHCGEVPN---RKEIQAMLDF-C 842 +D+ VIGIDLS N + GE + L L + L + + G +PN + LD C Sbjct: 547 RDDCVIGIDLSSNSLSGEIPSELTNLRGLQFLNMSRNVLYGGIPNDIGHLHVVESLDLSC 606 Query: 843 PQRLG----HVCCLDDEEWKKLKSSMIPVEICLTSNVMTGGTPSLELHHFADLYNAKHPL 1010 + LG + L L ++++ EI + + + T PS+ + +L PL Sbjct: 607 NRLLGPIPPSISNLTGLSKLNLSNNLLSGEIPIGNQLQTLDDPSI---YANNLRLCGFPL 663 Query: 1011 SI-CTDDSGLFST 1046 I C++ S ST Sbjct: 664 KIPCSNHSNSTST 676
>AK068809:Os04g0647900 | Length = 959 Score = 32.7 bits (73), Expect = 0.62 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 12/126 (9%) Frame = +3 Query: 693 GIDLSGNPVVGEWETYLPALERAKELGIPTTIHCGEVP----NRKEIQAMLDFCPQRLGH 860 GIDLSGN + GE L L K L + G++P N EI++ LD L Sbjct: 782 GIDLSGNMLSGEIPWELGNLSHIKSLNLSNNFFTGQIPASFANMSEIES-LDLSHNELSG 840 Query: 861 VCCLDDEEWKKLKSSMIPVEICLTSNVMTG--------GTPSLELHHFADLYNAKHPLSI 1016 + W+ K S + V + N ++G GT ++ + + +I Sbjct: 841 LI-----PWQLTKLSSLAV-FSVAYNNLSGCIPNSGQFGTYGMDSYQGNSNLRSMSKGNI 894 Query: 1017 CTDDSG 1034 C+ DSG Sbjct: 895 CSPDSG 900
>AK098912:Os07g0150100 | Length = 731 Score = 31.6 bits (70), Expect = 1.4 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Frame = +3 Query: 333 ILTTDHDTVTRIAKEVIGD---FAAENVVYLEIRTTPKNNEAKGMTKRSYMNAVVKGLKS 503 ++ TDH +I +E+ G A VVY E +TT K K + ++ + K + + Sbjct: 231 MVVTDHTKADKIYQEIEGHKQKIARAEVVYAESKTTGKPEGTKPTHRIGFLGLIGKKVDT 290 Query: 504 VEDVDVVLNDEKISCAPMSDFGGDTK-RKKIYVRLLLSIDRRETTSAALDTVN 659 +E ND+ P + T R+K ++ +RR ++A T++ Sbjct: 291 IE----YCNDQIKELLPKLEAEQKTTLREKQQQAAIVFFNRRSAAASASQTLH 339
>AK065241:Os07g0150100 | Length = 731 Score = 31.6 bits (70), Expect = 1.4 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Frame = +3 Query: 333 ILTTDHDTVTRIAKEVIGD---FAAENVVYLEIRTTPKNNEAKGMTKRSYMNAVVKGLKS 503 ++ TDH +I +E+ G A VVY E +TT K K + ++ + K + + Sbjct: 231 MVVTDHTKADKIYQEIEGHKQKIARAEVVYAESKTTGKPEGTKPTHRIGFLGLIGKKVDT 290 Query: 504 VEDVDVVLNDEKISCAPMSDFGGDTK-RKKIYVRLLLSIDRRETTSAALDTVN 659 +E ND+ P + T R+K ++ +RR ++A T++ Sbjct: 291 IE----YCNDQIKELLPKLEAEQKTTLREKQQQAAIVFFNRRSAAASASQTLH 339
>Os10g0469600:Os10g0469600 | Length = 1375 Score = 30.8 bits (68), Expect = 2.4 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Frame = +3 Query: 693 GIDLSGNPVVGEWETYLPALERAKELGIPTTIHCGEVPNRKEIQAMLDFCPQRLGHVCCL 872 GIDLSGN + GE L L + L + G + P+R+G++ L Sbjct: 867 GIDLSGNSLYGEIPKELTYLRGLRFLNLSWNDLSGSI-------------PERIGNLNIL 913 Query: 873 D--DEEWKKLKSSMIPVEIC---------LTSNVMTGGTPS-LELHHFADLYNAKHPLSI 1016 + D W +L S +IP I L++N + G P+ +L F D + L + Sbjct: 914 ESLDLSWNEL-SGVIPASISNLSCLSVLNLSNNHLWGSIPTGRQLQTFVDPSIYSNNLGL 972 Query: 1017 C 1019 C Sbjct: 973 C 973
>Os02g0154700:Os02g0154700 | Length = 710 Score = 29.6 bits (65), Expect = 5.2 Identities = 17/52 (32%), Positives = 28/52 (53%) Frame = +3 Query: 651 TVNLALELKDEGVIGIDLSGNPVVGEWETYLPALERAKELGIPTTIHCGEVP 806 T+N +L +K ++ +DL N G+ + L+R KEL I + GE+P Sbjct: 257 TINGSLIIKLSNLVFVDLGWNRFSGKIPNSIGQLKRLKELHISSNNLSGELP 308
>AK106864:Os08g0164300 | Length = 335 Score = 29.6 bits (65), Expect = 5.2 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = +3 Query: 819 IQAMLDFCPQRLGHVCCLDDEEWKKLKSSMIPVEICLTSNVMTGGTPSL 965 + A++ +R GHV CL D+ + L+ ++ +C GG PSL Sbjct: 153 VDAIMWRAVRRTGHVVCLHDKSGRYLRGKLMSTLVC-------GGRPSL 194
>AK100376:Os02g0153700 | Length = 1047 Score = 29.3 bits (64), Expect = 6.8 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = +3 Query: 675 KDEGVIGIDLSGNPVVGEWETYLPALERAKELGIPTTIHCGEVP 806 K ++ +DL GN +G+ + L+R +EL + + + GE+P Sbjct: 273 KLRNLVTLDLGGNQFIGKIPDSISQLKRLEELHLDSNMMSGELP 316
>AY180331:Os05g0150600 | Length = 872 Score = 28.9 bits (63), Expect = 8.9 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 8/95 (8%) Frame = +3 Query: 897 KSSMIPVEICLTSNVMTGGTPSLELHHFADLYNAKHPLSIC-----TDDSGLFSTSLSNE 1061 KS + LT+ V+ +P + L H L AKH +S C DS + ++S Sbjct: 203 KSLCFQIPALLTAKVVVVISPLISLMHDQCLKLAKHGISACFLGSGQPDSRVEGKAMSGM 262 Query: 1062 Y---YLVASTFGLSKAELFRLAQSAVEFVFADDEV 1157 Y Y+ T L +LA+ +FA DEV Sbjct: 263 YKIIYVCPETVLRLMEPLKKLAEKPGIALFAIDEV 297
>AK100489:Os06g0704400 | Length = 865 Score = 28.9 bits (63), Expect = 8.9 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +3 Query: 18 PHKRLERDKTNHTSRAPGRRRSKTKPAAMGTQTSEAEKEMRAWCVALPKVELHAHLNGS 194 P L T +S+ +R+S+T AA S++ K + + AL VELHAH GS Sbjct: 766 PADNLMLSNTQQSSKQSRKRKSRT--AANTNSASQSRKTVSSKQKAL--VELHAHSQGS 820
>AK072977:Os05g0150600 | Length = 844 Score = 28.9 bits (63), Expect = 8.9 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 8/95 (8%) Frame = +3 Query: 897 KSSMIPVEICLTSNVMTGGTPSLELHHFADLYNAKHPLSIC-----TDDSGLFSTSLSNE 1061 KS + LT+ V+ +P + L H L AKH +S C DS + ++S Sbjct: 203 KSLCFQIPALLTAKVVVVISPLISLMHDQCLKLAKHGISACFLGSGQPDSRVEGKAMSGM 262 Query: 1062 Y---YLVASTFGLSKAELFRLAQSAVEFVFADDEV 1157 Y Y+ T L +LA+ +FA DEV Sbjct: 263 YKIIYVCPETVLRLMEPLKKLAEKPGIALFAIDEV 297
>AK072783:Os07g0568000 | Length = 773 Score = 28.9 bits (63), Expect = 8.9 Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 12/178 (6%) Frame = +3 Query: 363 RIAKEVIGDFAAENVVYLEIRTTPKNNEAKGMTKRSYMNAVVKGL----KSVEDVDVVLN 530 RI++EV+ A + ++ L+ K+ A+G+ + M+ V + L K +D V Sbjct: 67 RISEEVVE--AEQELIELQ-----KHVSAQGILVQDLMSGVCRELEMWQKHCKDEHVEEK 119 Query: 531 DEKISCAPMSDFGGDTKRKKIYVRLLLSIDRRETTSAA--LDTVNLALELKDEGVIGIDL 704 D + + + DT+ K+ +D+ +T A ++ LALE +++ + D Sbjct: 120 DLQTELDEILSY--DTQDSKVSF-----LDKLDTLLAEHKIEEALLALETEEKKCMATDD 172 Query: 705 SGNPVVGEWETYLPALERAKELGIPTTIHCGEVPN------RKEIQAMLDFCPQRLGH 860 G + E TY AL + K + + E P+ RK + ++ L H Sbjct: 173 PGKELDAEISTYKTALSKRKSILEDQLVRYSEQPSLSITELRKSLSGLIKIGKGSLAH 230
>AK069485:Os07g0568000 | Length = 773 Score = 28.9 bits (63), Expect = 8.9 Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 12/178 (6%) Frame = +3 Query: 363 RIAKEVIGDFAAENVVYLEIRTTPKNNEAKGMTKRSYMNAVVKGL----KSVEDVDVVLN 530 RI++EV+ A + ++ L+ K+ A+G+ + M+ V + L K +D V Sbjct: 67 RISEEVVE--AEQELIELQ-----KHVSAQGILVQDLMSGVCRELEMWQKHCKDEHVEEK 119 Query: 531 DEKISCAPMSDFGGDTKRKKIYVRLLLSIDRRETTSAA--LDTVNLALELKDEGVIGIDL 704 D + + + DT+ K+ +D+ +T A ++ LALE +++ + D Sbjct: 120 DLQTELDEILSY--DTQDSKVSF-----LDKLDTLLAEHKIEEALLALETEEKKCMATDD 172 Query: 705 SGNPVVGEWETYLPALERAKELGIPTTIHCGEVPN------RKEIQAMLDFCPQRLGH 860 G + E TY AL + K + + E P+ RK + ++ L H Sbjct: 173 PGKELDAEISTYKTALSKRKSILEDQLVRYSEQPSLSITELRKSLSGLIKIGKGSLAH 230
>AK069477:Os06g0704400 | Length = 865 Score = 28.9 bits (63), Expect = 8.9 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +3 Query: 18 PHKRLERDKTNHTSRAPGRRRSKTKPAAMGTQTSEAEKEMRAWCVALPKVELHAHLNGS 194 P L T +S+ +R+S+T AA S++ K + + AL VELHAH GS Sbjct: 766 PADNLMLSNTQQSSKQSRKRKSRT--AANTNSASQSRKTVSSKQKAL--VELHAHSQGS 820
>AK063338:Os05g0150600 | Length = 468 Score = 28.9 bits (63), Expect = 8.9 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 8/95 (8%) Frame = +3 Query: 897 KSSMIPVEICLTSNVMTGGTPSLELHHFADLYNAKHPLSIC-----TDDSGLFSTSLSNE 1061 KS + LT+ V+ +P + L H L AKH +S C DS + ++S Sbjct: 203 KSLCFQIPALLTAKVVVVISPLISLMHDQCLKLAKHGISACFLGSGQPDSRVEGKAMSGM 262 Query: 1062 Y---YLVASTFGLSKAELFRLAQSAVEFVFADDEV 1157 Y Y+ T L +LA+ +FA DEV Sbjct: 263 YKIIYVCPETVLRLMEPLKKLAEKPGIALFAIDEV 297
>AK062169:Os06g0704400 | Length = 306 Score = 28.9 bits (63), Expect = 8.9 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +3 Query: 18 PHKRLERDKTNHTSRAPGRRRSKTKPAAMGTQTSEAEKEMRAWCVALPKVELHAHLNGS 194 P L T +S+ +R+S+T AA S++ K + + AL VELHAH GS Sbjct: 207 PADNLMLSNTQQSSKQSRKRKSRT--AANTNSASQSRKTVSSKQKAL--VELHAHSQGS 261
>AK060865:Os06g0708500 | Length = 254 Score = 28.9 bits (63), Expect = 8.9 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +2 Query: 824 SNAGLLPSKARSCLLP*RRRVEEAQVINDPGGDMFNLQCYDRRHPFSRASSLC 982 SN + PS RS +P RRR E + ++ G + RR P SR +S+C Sbjct: 2 SNRSIHPSHPRS-FIPARRRARERRRRSEMAGSGWRRIPAVRRPPMSRPASVC 53 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 36,170,106 Number of extensions: 785507 Number of successful extensions: 2385 Number of sequences better than 10.0: 18 Number of HSP's gapped: 2382 Number of HSP's successfully gapped: 18 Length of query: 458 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 354 Effective length of database: 11,235,591 Effective search space: 3977399214 Effective search space used: 3977399214 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
