ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf105n16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009002.1| Triticum aestivum clone wdk2c.pk017.c19:fis, full insert mRNA sequence Length = 1040 Score = 733 bits (370), Expect = 0.0 Identities = 669/769 (86%), Gaps = 6/769 (0%) Strand = Plus / Plus Query: 28 gcgccaccgtcgaagcaggaatggactgcggtactgatgatgcgcaccaacacggccatg 87 |||||||||| | ||||| |||||||| | ||||||| |||| ||||||||||||||||| Sbjct: 8 gcgccaccgttgcagcagcaatggactacagtactgaagatgagcaccaacacggccatg 67 Query: 88 gccatggcaatgacgacggcggcgatgcggcggagtggaagaaggtggcggagctgaggg 147 || ||||| ||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 68 gctatggc------gacggtgacgacgcggcggagtggaagaaggtggcggagctgaggg 121 Query: 148 ccgtggtcgaggcacaggaccccgcagccaaggaggaggacgacctcgcgctccggcggt 207 |||| |||||||| ||||||||||| |||||||||||||| ||| | |||| || || | Sbjct: 122 ccgtcgtcgaggcccaggaccccgctgccaaggaggaggatgacttttcgctgcgacgat 181 Query: 208 tcctgcgtgcccgggaccacaacatcggcaaggcgtcggtgatgctcctccactaccttg 267 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 182 tcctgcgtgcccgggaccacaacatcggcaaggcgtcggccatgctcctccagtaccttt 241 Query: 268 cctggaaacgcgtcgccaaaccccatggctcgatctcggacgacgaggtgcgtgacgaga 327 |||||| || || ||||| ||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 242 cctggaggcgtgttgccaagccccatggctccatctcggccgacgaggtgcgcgacgaga 301 Query: 328 tcgcaaaggatagggtctgcatggagggcttcgaccgtctcaaccgccccatggcgtatc 387 | ||||||||||| ||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 302 ttgcaaaggatagagtccgcatgcagggcttcgaccgtctcaatcgccccatggcgtatc 361 Query: 388 tctatggcgcgcgccattttcccgcccggcgtgatctcgacgggttcaagcgctacgtca 447 ||||||| || || ||||| || ||||||||||| || |||| |||||||||||| |||| Sbjct: 362 tctatggtgcacgacatttccctgcccggcgtgaccttgacgagttcaagcgctatgtca 421 Query: 448 tctatgtcctcgacaaaatctgcaccaggttgccggtggggcaggagaagtttgcggcgg 507 ||||||||| || ||||| ||||| |||||||| |||||||| ||||||||||| |||| Sbjct: 422 cctatgtccttgataaaatttgcactaggttgcctgtggggcaagagaagtttgcagcgg 481 Query: 508 tgatagacatgaggggttggggttacgccaactgcgacatccgcgggtacgtggcggcac 567 |||||||||||| ||| ||||| || || || || |||||||| || |||||||||||| Sbjct: 482 tgatagacatgaaggggtggggatatgcgaattgtgacatccggggttacgtggcggcat 541 Query: 568 tggacatcatgcagagctattacccagagcgcctgggccgagtgttcctgatccacgtgc 627 |||| ||||||||| |||| ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 542 tggaaatcatgcagggctactacccggagcgccttggccgggtgttcctgatccacgtgc 601 Query: 628 cctacatgttcatggcagcatggaagatggtgtacccattcatcgacgataggaccagga 687 |||||||||||||||| |||||||||||||||||||| ||||| ||||| | ||| ||| Sbjct: 602 cctacatgttcatggcggcatggaagatggtgtacccgttcattgacgaccgaacccgga 661 Query: 688 agaagtttgtgttcgtggccgataaagaccttgaccccaccctccgtggcgccatcaagg 747 |||||||||||||||| || ||||| ||||| | |||| |||| |||||||| | | Sbjct: 662 agaagtttgtgttcgtcgctgataaggacctcaaatccacgctccagggcgccattgacg 721 Query: 748 agtcccagctccccgaggagtacggcggcaacctgaagctgtagggcta 796 ||||||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct: 722 agtcccagctccccgaggagtacggtggcaagctgaagctttagggcta 770 Score = 91.7 bits (46), Expect = 5e-15 Identities = 117/138 (84%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 737 cgccatcaaggagtcccagctccccgaggagtacggcggcaacctgaagctgtagggcta 796 ||||||| | ||||||||||||||||||||||||| |||||| ||| || ||||| || Sbjct: 859 cgccatcgacgagtcccagctccccgaggagtacgacggcaagttgacactctagggata 918 Query: 797 tgatagttcactatcgtctaagtccatgta-acgatcggtcgatggcgatcactacctga 855 | | ||||||| ||||||||||| ||| || ||| |||||||||||||||||||| || | Sbjct: 919 tcaaagttcacgatcgtctaagt-catttagacggtcggtcgatggcgatcactagctaa 977 Query: 856 gatatgcaattaaaggtg 873 ||||| |||||| |||| Sbjct: 978 catatgaaattaagggtg 995
>gb|BT008922.1| Triticum aestivum clone wyr1c.pk003.b6:fis, full insert mRNA sequence Length = 984 Score = 349 bits (176), Expect = 1e-92 Identities = 383/452 (84%) Strand = Plus / Plus Query: 372 cgccccatggcgtatctctatggcgcgcgccattttcccgcccggcgtgatctcgacggg 431 ||||||||| | ||||||||||| | |||||| || || | ||||||||||| ||| | Sbjct: 308 cgccccatgtcatatctctatggtgggcgccacttccctgtccggcgtgatcacgaagat 367 Query: 432 ttcaagcgctacgtcatctatgtcctcgacaaaatctgcaccaggttgccggtggggcag 491 |||||||||| || ||||||| | |||||||||||||||| | |||||| |||||| Sbjct: 368 ctcaagcgctatgtggtctatgtttttgacaaaatctgcaccaagctgccggcagggcag 427 Query: 492 gagaagtttgcggcggtgatagacatgaggggttggggttacgccaactgcgacatccgc 551 |||||||||||||||||||||||| ||| ||| ||||| || || |||||||||||||| Sbjct: 428 gagaagtttgcggcggtgatagacctgaagggatgggggtatgcaaactgcgacatccgt 487 Query: 552 gggtacgtggcggcactggacatcatgcagagctattacccagagcgcctgggccgagtg 611 |||||| |||| | |||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 488 gggtacctggcagggctggacatcatgcagagctattacccagagcggctgggccgcgtg 547 Query: 612 ttcctgatccacgtgccctacatgttcatggcagcatggaagatggtgtacccattcatc 671 ||||||||||||||||||||| | |||||||| || |||||||| |||||||| || ||| Sbjct: 548 ttcctgatccacgtgccctacctattcatggctgcgtggaagattgtgtaccccttaatc 607 Query: 672 gacgataggaccaggaagaagtttgtgttcgtggccgataaagaccttgaccccaccctc 731 || || | ||||| |||||||||||||||||| || |||| ||||||||| |||| || Sbjct: 608 gatgacaagaccaagaagaagtttgtgttcgtcgctgatagggaccttgacgccacactt 667 Query: 732 cgtggcgccatcaaggagtcccagctccccgaggagtacggcggcaacctgaagctgtag 791 || | ||||||| | |||||||||||||| ||||||||||| ||||| || ||||| ||| Sbjct: 668 cgagacgccatcgacgagtcccagctccctgaggagtacggtggcaagctcaagctctag 727 Query: 792 ggctatgatagttcactatcgtctaagtccat 823 | ||| | ||||||| |||||| |||||||| Sbjct: 728 gcctacaacagttcaccatcgtccaagtccat 759 Score = 226 bits (114), Expect = 1e-55 Identities = 201/230 (87%) Strand = Plus / Plus Query: 107 cggcgatgcggcggagtggaagaaggtggcggagctgagggccgtggtcgaggcacagga 166 |||||| ||||||||||||||||||||||||||||| |||| | || ||||||||||| Sbjct: 43 cggcgacgcggcggagtggaagaaggtggcggagctcagggagttcgttgaggcacagga 102 Query: 167 ccccgcagccaaggaggaggacgacctcgcgctccggcggttcctgcgtgcccgggacca 226 |||| | |||||||||||||| ||| ||||||| |||||||||||||| ||||||||||| Sbjct: 103 cccctctgccaaggaggaggatgacttcgcgctgcggcggttcctgcgcgcccgggacca 162 Query: 227 caacatcggcaaggcgtcggtgatgctcctccactaccttgcctggaaacgcgtcgccaa 286 ||||||| |||||| ||||||||||| |||| || ||||||||||| || ||| |||| Sbjct: 163 caacatcaacaaggcatcggtgatgcttctccggtatcttgcctggaagcgtgtcaccaa 222 Query: 287 accccatggctcgatctcggacgacgaggtgcgtgacgagatcgcaaagg 336 |||||||||| ||||| |||||| ||||||||| |||||||||||||| Sbjct: 223 gccccatggcttcatctccgacgacaaggtgcgtggcgagatcgcaaagg 272
>ref|NM_001058443.1| Oryza sativa (japonica cultivar-group) Os03g0850700 (Os03g0850700) mRNA, complete cds Length = 1196 Score = 145 bits (73), Expect = 4e-31 Identities = 211/257 (82%) Strand = Plus / Plus Query: 531 tacgccaactgcgacatccgcgggtacgtggcggcactggacatcatgcagagctattac 590 |||| ||||||||||||||||| |||||||||||| ||||| |||||||||| ||| ||| Sbjct: 620 tacggcaactgcgacatccgcgcgtacgtggcggcgctggagatcatgcagaactactac 679 Query: 591 ccagagcgcctgggccgagtgttcctgatccacgtgccctacatgttcatggcagcatgg 650 || ||| | ||||| | |||||| ||||||| || |||||| |||||||||| || ||| Sbjct: 680 ccggagaggctggggagggtgttcttgatccatgtcccctacgtgttcatggcggcctgg 739 Query: 651 aagatggtgtacccattcatcgacgataggaccaggaagaagtttgtgttcgtggccgat 710 ||||| | ||||| ||||||||||| | |||| ||||||||| || ||||| ||||| Sbjct: 740 aagatcatctaccccttcatcgacgacaacaccaagaagaagttcgtcttcgtcgccgac 799 Query: 711 aaagaccttgaccccaccctccgtggcgccatcaaggagtcccagctccccgaggagtac 770 || ||||| || |||| ||||| | ||||||| | || ||| | ||| ||||||| ||| Sbjct: 800 aaggacctccacgccacgctccgcgacgccatcgacgactccaacctcgccgaggactac 859 Query: 771 ggcggcaacctgaagct 787 |||||||| || ||||| Sbjct: 860 ggcggcaagctcaagct 876 Score = 123 bits (62), Expect = 1e-24 Identities = 125/146 (85%) Strand = Plus / Plus Query: 108 ggcgatgcggcggagtggaagaaggtggcggagctgagggccgtggtcgaggcacaggac 167 ||||||| | ||||||||||||||||||| |||||||| ||||| ||||| || |||||| Sbjct: 185 ggcgatgtgacggagtggaagaaggtggccgagctgagagccgtcgtcgaagcccaggac 244 Query: 168 cccgcagccaaggaggaggacgacctcgcgctccggcggttcctgcgtgcccgggaccac 227 || ||| |||||||||||||||| | ||| || ||||||||||| || | |||||| Sbjct: 245 cctgcatgcaaggaggaggacgactaccagctgcgccggttcctgcgcgcgagagaccac 304 Query: 228 aacatcggcaaggcgtcggtgatgct 253 ||||||||||||||||||| |||||| Sbjct: 305 aacatcggcaaggcgtcggcgatgct 330 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 423 ctcgacgggttcaagcgctacgtcatctatgtcctcgac 461 ||||||| |||||||||||||||| |||| ||||||||| Sbjct: 503 ctcgacgagttcaagcgctacgtcgtctacgtcctcgac 541
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 145 bits (73), Expect = 4e-31 Identities = 211/257 (82%) Strand = Plus / Minus Query: 531 tacgccaactgcgacatccgcgggtacgtggcggcactggacatcatgcagagctattac 590 |||| ||||||||||||||||| |||||||||||| ||||| |||||||||| ||| ||| Sbjct: 35596788 tacggcaactgcgacatccgcgcgtacgtggcggcgctggagatcatgcagaactactac 35596729 Query: 591 ccagagcgcctgggccgagtgttcctgatccacgtgccctacatgttcatggcagcatgg 650 || ||| | ||||| | |||||| ||||||| || |||||| |||||||||| || ||| Sbjct: 35596728 ccggagaggctggggagggtgttcttgatccatgtcccctacgtgttcatggcggcctgg 35596669 Query: 651 aagatggtgtacccattcatcgacgataggaccaggaagaagtttgtgttcgtggccgat 710 ||||| | ||||| ||||||||||| | |||| ||||||||| || ||||| ||||| Sbjct: 35596668 aagatcatctaccccttcatcgacgacaacaccaagaagaagttcgtcttcgtcgccgac 35596609 Query: 711 aaagaccttgaccccaccctccgtggcgccatcaaggagtcccagctccccgaggagtac 770 || ||||| || |||| ||||| | ||||||| | || ||| | ||| ||||||| ||| Sbjct: 35596608 aaggacctccacgccacgctccgcgacgccatcgacgactccaacctcgccgaggactac 35596549 Query: 771 ggcggcaacctgaagct 787 |||||||| || ||||| Sbjct: 35596548 ggcggcaagctcaagct 35596532 Score = 67.9 bits (34), Expect = 8e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 108 ggcgatgcggcggagtggaagaaggtggcggagctgagggccgtggtcgaggcacaggac 167 ||||||| | ||||||||||||||||||| |||||||| ||||| ||||| || |||||| Sbjct: 35600627 ggcgatgtgacggagtggaagaaggtggccgagctgagagccgtcgtcgaagcccaggac 35600568 Query: 168 cc 169 || Sbjct: 35600567 cc 35600566 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Minus Query: 178 aggaggaggacgacctcgcgctccggcggttcctgcgtgcccgggaccacaacatcggca 237 |||||||||||||| | ||| || ||||||||||| || | |||||||||||||||| Sbjct: 35597153 aggaggaggacgactaccagctgcgccggttcctgcgcgcgagagaccacaacatcggca 35597094 Query: 238 aggcgtcggtgatgct 253 ||||||||| |||||| Sbjct: 35597093 aggcgtcggcgatgct 35597078 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 423 ctcgacgggttcaagcgctacgtcatctatgtcctcgac 461 ||||||| |||||||||||||||| |||| ||||||||| Sbjct: 35596905 ctcgacgagttcaagcgctacgtcgtctacgtcctcgac 35596867
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 145 bits (73), Expect = 4e-31 Identities = 211/257 (82%) Strand = Plus / Minus Query: 531 tacgccaactgcgacatccgcgggtacgtggcggcactggacatcatgcagagctattac 590 |||| ||||||||||||||||| |||||||||||| ||||| |||||||||| ||| ||| Sbjct: 39679 tacggcaactgcgacatccgcgcgtacgtggcggcgctggagatcatgcagaactactac 39620 Query: 591 ccagagcgcctgggccgagtgttcctgatccacgtgccctacatgttcatggcagcatgg 650 || ||| | ||||| | |||||| ||||||| || |||||| |||||||||| || ||| Sbjct: 39619 ccggagaggctggggagggtgttcttgatccatgtcccctacgtgttcatggcggcctgg 39560 Query: 651 aagatggtgtacccattcatcgacgataggaccaggaagaagtttgtgttcgtggccgat 710 ||||| | ||||| ||||||||||| | |||| ||||||||| || ||||| ||||| Sbjct: 39559 aagatcatctaccccttcatcgacgacaacaccaagaagaagttcgtcttcgtcgccgac 39500 Query: 711 aaagaccttgaccccaccctccgtggcgccatcaaggagtcccagctccccgaggagtac 770 || ||||| || |||| ||||| | ||||||| | || ||| | ||| ||||||| ||| Sbjct: 39499 aaggacctccacgccacgctccgcgacgccatcgacgactccaacctcgccgaggactac 39440 Query: 771 ggcggcaacctgaagct 787 |||||||| || ||||| Sbjct: 39439 ggcggcaagctcaagct 39423 Score = 67.9 bits (34), Expect = 8e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 108 ggcgatgcggcggagtggaagaaggtggcggagctgagggccgtggtcgaggcacaggac 167 ||||||| | ||||||||||||||||||| |||||||| ||||| ||||| || |||||| Sbjct: 43518 ggcgatgtgacggagtggaagaaggtggccgagctgagagccgtcgtcgaagcccaggac 43459 Query: 168 cc 169 || Sbjct: 43458 cc 43457 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Minus Query: 178 aggaggaggacgacctcgcgctccggcggttcctgcgtgcccgggaccacaacatcggca 237 |||||||||||||| | ||| || ||||||||||| || | |||||||||||||||| Sbjct: 40044 aggaggaggacgactaccagctgcgccggttcctgcgcgcgagagaccacaacatcggca 39985 Query: 238 aggcgtcggtgatgct 253 ||||||||| |||||| Sbjct: 39984 aggcgtcggcgatgct 39969 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 423 ctcgacgggttcaagcgctacgtcatctatgtcctcgac 461 ||||||| |||||||||||||||| |||| ||||||||| Sbjct: 39796 ctcgacgagttcaagcgctacgtcgtctacgtcctcgac 39758
>dbj|AK099525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030L21, full insert sequence Length = 1099 Score = 145 bits (73), Expect = 4e-31 Identities = 211/257 (82%) Strand = Plus / Plus Query: 531 tacgccaactgcgacatccgcgggtacgtggcggcactggacatcatgcagagctattac 590 |||| ||||||||||||||||| |||||||||||| ||||| |||||||||| ||| ||| Sbjct: 546 tacggcaactgcgacatccgcgcgtacgtggcggcgctggagatcatgcagaactactac 605 Query: 591 ccagagcgcctgggccgagtgttcctgatccacgtgccctacatgttcatggcagcatgg 650 || ||| | ||||| | |||||| ||||||| || |||||| |||||||||| || ||| Sbjct: 606 ccggagaggctggggagggtgttcttgatccatgtcccctacgtgttcatggcggcctgg 665 Query: 651 aagatggtgtacccattcatcgacgataggaccaggaagaagtttgtgttcgtggccgat 710 ||||| | ||||| ||||||||||| | |||| ||||||||| || ||||| ||||| Sbjct: 666 aagatcatctaccccttcatcgacgacaacaccaagaagaagttcgtcttcgtcgccgac 725 Query: 711 aaagaccttgaccccaccctccgtggcgccatcaaggagtcccagctccccgaggagtac 770 || ||||| || |||| ||||| | ||||||| | || ||| | ||| ||||||| ||| Sbjct: 726 aaggacctccacgccacgctccgcgacgccatcgacgactccaacctcgccgaggactac 785 Query: 771 ggcggcaacctgaagct 787 |||||||| || ||||| Sbjct: 786 ggcggcaagctcaagct 802 Score = 123 bits (62), Expect = 1e-24 Identities = 125/146 (85%) Strand = Plus / Plus Query: 108 ggcgatgcggcggagtggaagaaggtggcggagctgagggccgtggtcgaggcacaggac 167 ||||||| | ||||||||||||||||||| |||||||| ||||| ||||| || |||||| Sbjct: 111 ggcgatgtgacggagtggaagaaggtggccgagctgagagccgtcgtcgaagcccaggac 170 Query: 168 cccgcagccaaggaggaggacgacctcgcgctccggcggttcctgcgtgcccgggaccac 227 || ||| |||||||||||||||| | ||| || ||||||||||| || | |||||| Sbjct: 171 cctgcatgcaaggaggaggacgactaccagctgcgccggttcctgcgcgcgagagaccac 230 Query: 228 aacatcggcaaggcgtcggtgatgct 253 ||||||||||||||||||| |||||| Sbjct: 231 aacatcggcaaggcgtcggcgatgct 256 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 423 ctcgacgggttcaagcgctacgtcatctatgtcctcgac 461 ||||||| |||||||||||||||| |||| ||||||||| Sbjct: 429 ctcgacgagttcaagcgctacgtcgtctacgtcctcgac 467
>dbj|AK062083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-G01, full insert sequence Length = 1196 Score = 145 bits (73), Expect = 4e-31 Identities = 211/257 (82%) Strand = Plus / Plus Query: 531 tacgccaactgcgacatccgcgggtacgtggcggcactggacatcatgcagagctattac 590 |||| ||||||||||||||||| |||||||||||| ||||| |||||||||| ||| ||| Sbjct: 620 tacggcaactgcgacatccgcgcgtacgtggcggcgctggagatcatgcagaactactac 679 Query: 591 ccagagcgcctgggccgagtgttcctgatccacgtgccctacatgttcatggcagcatgg 650 || ||| | ||||| | |||||| ||||||| || |||||| |||||||||| || ||| Sbjct: 680 ccggagaggctggggagggtgttcttgatccatgtcccctacgtgttcatggcggcctgg 739 Query: 651 aagatggtgtacccattcatcgacgataggaccaggaagaagtttgtgttcgtggccgat 710 ||||| | ||||| ||||||||||| | |||| ||||||||| || ||||| ||||| Sbjct: 740 aagatcatctaccccttcatcgacgacaacaccaagaagaagttcgtcttcgtcgccgac 799 Query: 711 aaagaccttgaccccaccctccgtggcgccatcaaggagtcccagctccccgaggagtac 770 || ||||| || |||| ||||| | ||||||| | || ||| | ||| ||||||| ||| Sbjct: 800 aaggacctccacgccacgctccgcgacgccatcgacgactccaacctcgccgaggactac 859 Query: 771 ggcggcaacctgaagct 787 |||||||| || ||||| Sbjct: 860 ggcggcaagctcaagct 876 Score = 123 bits (62), Expect = 1e-24 Identities = 125/146 (85%) Strand = Plus / Plus Query: 108 ggcgatgcggcggagtggaagaaggtggcggagctgagggccgtggtcgaggcacaggac 167 ||||||| | ||||||||||||||||||| |||||||| ||||| ||||| || |||||| Sbjct: 185 ggcgatgtgacggagtggaagaaggtggccgagctgagagccgtcgtcgaagcccaggac 244 Query: 168 cccgcagccaaggaggaggacgacctcgcgctccggcggttcctgcgtgcccgggaccac 227 || ||| |||||||||||||||| | ||| || ||||||||||| || | |||||| Sbjct: 245 cctgcatgcaaggaggaggacgactaccagctgcgccggttcctgcgcgcgagagaccac 304 Query: 228 aacatcggcaaggcgtcggtgatgct 253 ||||||||||||||||||| |||||| Sbjct: 305 aacatcggcaaggcgtcggcgatgct 330 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 423 ctcgacgggttcaagcgctacgtcatctatgtcctcgac 461 ||||||| |||||||||||||||| |||| ||||||||| Sbjct: 503 ctcgacgagttcaagcgctacgtcgtctacgtcctcgac 541
>dbj|AK061542.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H09, full insert sequence Length = 1013 Score = 145 bits (73), Expect = 4e-31 Identities = 211/257 (82%) Strand = Plus / Plus Query: 531 tacgccaactgcgacatccgcgggtacgtggcggcactggacatcatgcagagctattac 590 |||| ||||||||||||||||| |||||||||||| ||||| |||||||||| ||| ||| Sbjct: 538 tacggcaactgcgacatccgcgcgtacgtggcggcgctggagatcatgcagaactactac 597 Query: 591 ccagagcgcctgggccgagtgttcctgatccacgtgccctacatgttcatggcagcatgg 650 || ||| | ||||| | |||||| ||||||| || |||||| |||||||||| || ||| Sbjct: 598 ccggagaggctggggagggtgttcttgatccatgtcccctacgtgttcatggcggcctgg 657 Query: 651 aagatggtgtacccattcatcgacgataggaccaggaagaagtttgtgttcgtggccgat 710 ||||| | ||||| ||||||||||| | |||| ||||||||| || ||||| ||||| Sbjct: 658 aagatcatctaccccttcatcgacgacaacaccaagaagaagttcgtcttcgtcgccgac 717 Query: 711 aaagaccttgaccccaccctccgtggcgccatcaaggagtcccagctccccgaggagtac 770 || ||||| || |||| ||||| | ||||||| | || ||| | ||| ||||||| ||| Sbjct: 718 aaggacctccacgccacgctccgcgacgccatcgacgactccaacctcgccgaggactac 777 Query: 771 ggcggcaacctgaagct 787 |||||||| || ||||| Sbjct: 778 ggcggcaagctcaagct 794 Score = 123 bits (62), Expect = 1e-24 Identities = 125/146 (85%) Strand = Plus / Plus Query: 108 ggcgatgcggcggagtggaagaaggtggcggagctgagggccgtggtcgaggcacaggac 167 ||||||| | ||||||||||||||||||| |||||||| ||||| ||||| || |||||| Sbjct: 103 ggcgatgtgacggagtggaagaaggtggccgagctgagagccgtcgtcgaagcccaggac 162 Query: 168 cccgcagccaaggaggaggacgacctcgcgctccggcggttcctgcgtgcccgggaccac 227 || ||| |||||||||||||||| | ||| || ||||||||||| || | |||||| Sbjct: 163 cctgcatgcaaggaggaggacgactaccagctgcgccggttcctgcgcgcgagagaccac 222 Query: 228 aacatcggcaaggcgtcggtgatgct 253 ||||||||||||||||||| |||||| Sbjct: 223 aacatcggcaaggcgtcggcgatgct 248 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 423 ctcgacgggttcaagcgctacgtcatctatgtcctcgac 461 ||||||| |||||||||||||||| |||| ||||||||| Sbjct: 421 ctcgacgagttcaagcgctacgtcgtctacgtcctcgac 459
>gb|AY111686.1| Zea mays CL6058_1 mRNA sequence Length = 650 Score = 135 bits (68), Expect = 4e-28 Identities = 131/152 (86%) Strand = Plus / Minus Query: 525 tggggttacgccaactgcgacatccgcgggtacgtggcggcactggacatcatgcagagc 584 ||||| |||||||||||||||||||| || ||| ||||||| || ||||||||||||||| Sbjct: 356 tggggctacgccaactgcgacatccgaggctacctggcggcgctcgacatcatgcagagc 297 Query: 585 tattacccagagcgcctgggccgagtgttcctgatccacgtgccctacatgttcatggca 644 || ||||| |||||||| | ||| || ||||| |||||||||||||| | |||||||| Sbjct: 296 tactacccggagcgcctcgcccgcgtcttcctcgtccacgtgccctacgtcttcatggcc 237 Query: 645 gcatggaagatggtgtacccattcatcgacga 676 || |||||||| || ||||| ||||||||||| Sbjct: 236 gcctggaagatcgtctaccccttcatcgacga 205 Score = 46.1 bits (23), Expect = 0.28 Identities = 35/39 (89%) Strand = Plus / Minus Query: 423 ctcgacgggttcaagcgctacgtcatctatgtcctcgac 461 ||||||| |||||||||||||||| || | ||||||||| Sbjct: 476 ctcgacgagttcaagcgctacgtcgtccacgtcctcgac 438
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 85.7 bits (43), Expect = 3e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 224 ccacaacatcggcaaggcgtcggtgatgctcctccactaccttgcctggaaacgcgtcgc 283 ||||||||||||||||||||||| |||||||||| | |||||||||||||| || | || Sbjct: 405784 ccacaacatcggcaaggcgtcggcgatgctcctcaagtaccttgcctggaagcgggccgt 405843 Query: 284 caaaccccatggctcgatctcggacgacgaggtgc 318 ||| || | ||||| ||||| ||||||||||||| Sbjct: 405844 caagccgcgtggcttcatctccgacgacgaggtgc 405878 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 414 cggcgtgatctcgacgggttcaagcgctacgtcatctatgtcctcgacaaaa 465 |||||||| |||||| | |||||||||||||| |||| ||||||||||||| Sbjct: 405971 cggcgtgacttcgacgagctcaagcgctacgtcgtctacgtcctcgacaaaa 406022 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 123 tggaagaaggtggcggagctgagggccgtggtcgaggcacaggaccc 169 |||||||| |||||||||||||| ||||| | |||||| | |||||| Sbjct: 397961 tggaagaaagtggcggagctgagagccgtcgccgaggcccgggaccc 398007 Score = 46.1 bits (23), Expect = 0.28 Identities = 125/159 (78%) Strand = Plus / Plus Query: 495 aagtttgcggcggtgatagacatgaggggttggggttacgccaactgcgacatccgcggg 554 ||||||||||||||| | ||| ||| ||| |||||||||| ||||| |||||| | Sbjct: 406173 aagtttgcggcggtggtggacttgaaggggtggggttacgtgaactgtgacatcaaggca 406232 Query: 555 tacgtggcggcactggacatcatgcagagctattacccagagcgcctgggccgagtgttc 614 |||||||| || |||||||| ||| ||| ||||| |||| |||| | |||||| Sbjct: 406233 agcgtggcggggctagacatcataaagaactactacccggagcagttggggcaggtgttc 406292 Query: 615 ctgatccacgtgccctacatgttcatggcagcatggaag 653 ||| ||||||| |||| | |||||||||| ||||||||| Sbjct: 406293 ctggtccacgtacccttcgtgttcatggcggcatggaag 406331
>emb|AJ574850.2| Hordeum vulgare bcat-1 gene for branched-chain amino acid aminotransferase, exons 1-7 Length = 4318 Score = 77.8 bits (39), Expect = 8e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 1039 agaagatgctattatacgggtcgtcaatgcggggtttgcttagacgccataacatcgacc 1098 |||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| Sbjct: 1202 agaagatgctattataggggtcgtcaatgcggggtctgcttggacgccaccgcgtcgacc 1143 Query: 1099 cgcaaaccgaa 1109 |||||||||| Sbjct: 1142 tgcaaaccgaa 1132 Score = 50.1 bits (25), Expect = 0.018 Identities = 31/33 (93%) Strand = Plus / Minus Query: 1038 cagaagatgctattatacgggtcgtcaatgcgg 1070 ||||||||| |||||||||| |||||||||||| Sbjct: 1290 cagaagatgttattatacggatcgtcaatgcgg 1258 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 924 tataatgccgactcgtaaaagtcgtttacagtt 956 ||||| |||||||||||||| || ||||||||| Sbjct: 1370 tataaagccgactcgtaaaaatcatttacagtt 1338
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 60.0 bits (30), Expect = 2e-05 Identities = 61/70 (87%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 1009 caaaacggatccgtataaaaggacattcgcagaagatgctattatacgggtcgtcaatgc 1068 ||||||||| ||||| ||||||| ||| |||||||||| | || ||||||||| |||||| Sbjct: 27294 caaaacggacccgta-aaaaggatatttgcagaagatgtttttttacgggtcgacaatgc 27352 Query: 1069 ggggtttgct 1078 ||||| |||| Sbjct: 27353 ggggtctgct 27362
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 58.0 bits (29), Expect = 7e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 900 taagagcatctctagcagaccccgtataa 928 ||||||||||||||||||||||||||||| Sbjct: 38256 taagagcatctctagcagaccccgtataa 38228
>gb|AY110277.1| Zea mays CL615_-1 mRNA sequence Length = 982 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 616 tgatccacgtgccctacatgttcatggcagcatggaagatggtgtacccattcatcgac 674 ||||||||||||||||||| |||||| || ||||||||| | ||||| ||||||||| Sbjct: 627 tgatccacgtgccctacatcttcatgaaggcgtggaagatgatctaccccttcatcgac 685
>ref|NM_001051800.1| Oryza sativa (japonica cultivar-group) Os01g0926800 (Os01g0926800) mRNA, complete cds Length = 1116 Score = 52.0 bits (26), Expect = 0.005 Identities = 74/90 (82%) Strand = Plus / Plus Query: 616 tgatccacgtgccctacatgttcatggcagcatggaagatggtgtacccattcatcgacg 675 ||||||| || ||||||||||||||| || ||||||||| | ||||| ||||||||| Sbjct: 596 tgatccatgtaccctacatgttcatgaaggcctggaagatgatctaccctttcatcgaca 655 Query: 676 ataggaccaggaagaagtttgtgttcgtgg 705 || |||||| | ||||| |||||||||| Sbjct: 656 atgtcaccagggacaagttcgtgttcgtgg 685
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 900 taagagcatctctagcagaccccgtataatgccg 933 |||||||| ||||||||||||||| ||||||||| Sbjct: 20220 taagagcaactctagcagaccccgcataatgccg 20187
>gb|DQ175833.1| Hordeum vulgare clone DsB33 Ds insertion site flanking region genomic sequence Length = 887 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 900 taagagcatctctagcagaccccgtataatgccg 933 |||||||| ||||||||||||||| ||||||||| Sbjct: 98 taagagcaactctagcagaccccgcataatgccg 131
>dbj|AK121373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C08, full insert sequence Length = 1034 Score = 52.0 bits (26), Expect = 0.005 Identities = 74/90 (82%) Strand = Plus / Plus Query: 616 tgatccacgtgccctacatgttcatggcagcatggaagatggtgtacccattcatcgacg 675 ||||||| || ||||||||||||||| || ||||||||| | ||||| ||||||||| Sbjct: 628 tgatccatgtaccctacatgttcatgaaggcctggaagatgatctaccctttcatcgaca 687 Query: 676 ataggaccaggaagaagtttgtgttcgtgg 705 || |||||| | ||||| |||||||||| Sbjct: 688 atgtcaccagggacaagttcgtgttcgtgg 717
>gb|U88068.1|OSU88068 Oryza sativa sec14 like protein mRNA, complete cds Length = 1142 Score = 52.0 bits (26), Expect = 0.005 Identities = 74/90 (82%) Strand = Plus / Plus Query: 616 tgatccacgtgccctacatgttcatggcagcatggaagatggtgtacccattcatcgacg 675 ||||||| || ||||||||||||||| || ||||||||| | ||||| ||||||||| Sbjct: 602 tgatccatgtaccctacatgttcatgaaggcctggaagatgatctaccctttcatcgaca 661 Query: 676 ataggaccaggaagaagtttgtgttcgtgg 705 || |||||| | ||||| |||||||||| Sbjct: 662 atgtcaccagggacaagttcgtgttcgtgg 691
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 48.1 bits (24), Expect = 0.070 Identities = 30/32 (93%) Strand = Plus / Minus Query: 897 acctaagagcatctctagcagaccccgtataa 928 |||| ||||||||||||||||| ||||||||| Sbjct: 29084 accttagagcatctctagcagatcccgtataa 29053 Score = 48.1 bits (24), Expect = 0.070 Identities = 27/28 (96%) Strand = Plus / Plus Query: 898 cctaagagcatctctagcagaccccgta 925 |||||||||| ||||||||||||||||| Sbjct: 190441 cctaagagcaactctagcagaccccgta 190468
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Minus Query: 902 agagcatctctagcagaccccgtataa 928 |||||||||||||||||| |||||||| Sbjct: 55197 agagcatctctagcagactccgtataa 55171
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 46.1 bits (23), Expect = 0.28 Identities = 50/59 (84%) Strand = Plus / Plus Query: 616 tgatccacgtgccctacatgttcatggcagcatggaagatggtgtacccattcatcgac 674 ||||||| || ||||||||||||||| || ||||||||| | ||||| ||||||||| Sbjct: 40640120 tgatccatgtaccctacatgttcatgaaggcctggaagatgatctaccctttcatcgac 40640178
>gb|AE009842.1|AE009842 Pyrobaculum aerophilum strain IM2 section 97 of 201 of the complete genome Length = 14071 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 754 agctccccgaggagtacggcggc 776 ||||||||||||||||||||||| Sbjct: 12621 agctccccgaggagtacggcggc 12599
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 46.1 bits (23), Expect = 0.28 Identities = 50/59 (84%) Strand = Plus / Plus Query: 616 tgatccacgtgccctacatgttcatggcagcatggaagatggtgtacccattcatcgac 674 ||||||| || ||||||||||||||| || ||||||||| | ||||| ||||||||| Sbjct: 82098 tgatccatgtaccctacatgttcatgaaggcctggaagatgatctaccctttcatcgac 82156
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 94 gcaatgacgacggcggcgatgcg 116 ||||||||||||||||||||||| Sbjct: 1669575 gcaatgacgacggcggcgatgcg 1669597
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 46.1 bits (23), Expect = 0.28 Identities = 50/59 (84%) Strand = Plus / Plus Query: 616 tgatccacgtgccctacatgttcatggcagcatggaagatggtgtacccattcatcgac 674 ||||||| || ||||||||||||||| || ||||||||| | ||||| ||||||||| Sbjct: 120135 tgatccatgtaccctacatgttcatgaaggcctggaagatgatctaccctttcatcgac 120193
>emb|CT009625.1| Aegilops tauschii Length = 117310 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 899 ctaagagcatctctagcagacc 920 |||||||||||||||||||||| Sbjct: 102343 ctaagagcatctctagcagacc 102364 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 902 agagcatctctagcagacccc 922 ||||||||||||||||||||| Sbjct: 103508 agagcatctctagcagacccc 103488
>ref|NM_119896.2| Arabidopsis thaliana CYP81D5; heme binding / iron ion binding / monooxygenase/ oxygen binding (CYP81D5) mRNA, complete cds Length = 1656 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cgacggcggcgatgcggcggag 122 |||||||||||||||||||||| Sbjct: 412 cgacggcggcgatgcggcggag 391
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 ggccatggccatggcaatgacgacgg 106 ||||||||||||||||||| |||||| Sbjct: 2983279 ggccatggccatggcaatggcgacgg 2983304
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 tgacgacggcggcgatgcggcg 119 |||||||||||||||||||||| Sbjct: 1442695 tgacgacggcggcgatgcggcg 1442674
>emb|CR626926.1| Aegilops tauschii Length = 94421 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 899 ctaagagcatctctagcagacc 920 |||||||||||||||||||||| Sbjct: 79454 ctaagagcatctctagcagacc 79475 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 902 agagcatctctagcagacccc 922 ||||||||||||||||||||| Sbjct: 80619 agagcatctctagcagacccc 80599
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 tgacgacggcggcgatgcggcg 119 |||||||||||||||||||||| Sbjct: 23497900 tgacgacggcggcgatgcggcg 23497921 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 gacgacggcggcgatgcggcg 119 ||||||||||||||||||||| Sbjct: 9473601 gacgacggcggcgatgcggcg 9473621
>emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1 Length = 206420 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cgacggcggcgatgcggcggag 122 |||||||||||||||||||||| Sbjct: 6399 cgacggcggcgatgcggcggag 6378
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 tgacgacggcggcgatgcggcg 119 |||||||||||||||||||||| Sbjct: 2753620 tgacgacggcggcgatgcggcg 2753599
>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87 Length = 196339 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 101 cgacggcggcgatgcggcggag 122 |||||||||||||||||||||| Sbjct: 55055 cgacggcggcgatgcggcggag 55076
>emb|AL035601.1|ATF6G17 Arabidopsis thaliana DNA chromosome 4, BAC clone F6G17 (ESSA project) Length = 101009 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 101 cgacggcggcgatgcggcggag 122 |||||||||||||||||||||| Sbjct: 12447 cgacggcggcgatgcggcggag 12468
>gb|BT004449.1| Arabidopsis thaliana clone U20394 putative cytochrome p450 family protein (At4g37320) mRNA, complete cds Length = 1519 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cgacggcggcgatgcggcggag 122 |||||||||||||||||||||| Sbjct: 406 cgacggcggcgatgcggcggag 385
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 tgacgacggcggcgatgcggcg 119 |||||||||||||||||||||| Sbjct: 58293 tgacgacggcggcgatgcggcg 58314
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 tgacgacggcggcgatgcggcg 119 |||||||||||||||||||||| Sbjct: 117797 tgacgacggcggcgatgcggcg 117818
>gb|BT002874.1| Arabidopsis thaliana clone RAFL15-01-B10 (R20394) putative cytochrome p450 family protein (At4g37320) mRNA, complete cds Length = 1693 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cgacggcggcgatgcggcggag 122 |||||||||||||||||||||| Sbjct: 433 cgacggcggcgatgcggcggag 412
>emb|BX826517.1|CNS0A40Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB34ZC03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1476 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cgacggcggcgatgcggcggag 122 |||||||||||||||||||||| Sbjct: 364 cgacggcggcgatgcggcggag 343
>emb|BX828411.1|CNS0A3TT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1424 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cgacggcggcgatgcggcggag 122 |||||||||||||||||||||| Sbjct: 294 cgacggcggcgatgcggcggag 273
>emb|BX827799.1|CNS0A3R5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH22ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1569 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cgacggcggcgatgcggcggag 122 |||||||||||||||||||||| Sbjct: 443 cgacggcggcgatgcggcggag 422
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 tgacgacggcggcgatgcggcg 119 |||||||||||||||||||||| Sbjct: 346099 tgacgacggcggcgatgcggcg 346120
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 757 tccccgaggagtacggcggca 777 ||||||||||||||||||||| Sbjct: 4806075 tccccgaggagtacggcggca 4806055
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 757 tccccgaggagtacggcggca 777 ||||||||||||||||||||| Sbjct: 1644549 tccccgaggagtacggcggca 1644569
>gb|AC189534.1| Brassica rapa subsp. pekinensis clone KBrH001J06, complete sequence Length = 131374 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 637 tcatggcagcatggaagatgg 657 ||||||||||||||||||||| Sbjct: 122031 tcatggcagcatggaagatgg 122011
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 acgacggcggcgatgcggcgg 120 ||||||||||||||||||||| Sbjct: 54918 acgacggcggcgatgcggcgg 54938
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 900 taagagcatctctagcagacc 920 ||||||||||||||||||||| Sbjct: 89656 taagagcatctctagcagacc 89676 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 902 agagcatctctagcagacccc 922 ||||||||||||||||||||| Sbjct: 90725 agagcatctctagcagacccc 90705
>gb|DQ175855.1| Hordeum vulgare clone DsC26 Ds insertion site flanking region genomic sequence Length = 637 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 909 ctctagcagaccccgtataatgccg 933 ||||||||||||||| ||||||||| Sbjct: 336 ctctagcagaccccgcataatgccg 360
>gb|AC100825.2| Homo sapiens chromosome 15, clone RP11-1152M12, complete sequence Length = 127680 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 633 atgttcatggcagcatggaag 653 ||||||||||||||||||||| Sbjct: 18712 atgttcatggcagcatggaag 18732
>gb|AC021553.14| Homo sapiens chromosome 15, clone RP11-709B3, complete sequence Length = 185596 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 633 atgttcatggcagcatggaag 653 ||||||||||||||||||||| Sbjct: 177492 atgttcatggcagcatggaag 177512
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 acgacggcggcgatgcggcgg 120 ||||||||||||||||||||| Sbjct: 19250843 acgacggcggcgatgcggcgg 19250863
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 742 tcaaggagtcccagctccccg 762 ||||||||||||||||||||| Sbjct: 8215103 tcaaggagtcccagctccccg 8215123
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 ccaggttgccggtggggcagg 492 ||||||||||||||||||||| Sbjct: 5877013 ccaggttgccggtggggcagg 5876993
>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1100H02 Length = 128773 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 gacgacggcggcgatgcggcg 119 ||||||||||||||||||||| Sbjct: 55587 gacgacggcggcgatgcggcg 55607
>ref|XM_953384.1| Neurospora crassa OR74A hypothetical protein (NCU07393.1) partial mRNA Length = 2736 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 gcagccaaggaggaggacgac 191 ||||||||||||||||||||| Sbjct: 757 gcagccaaggaggaggacgac 777
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 757 tccccgaggagtacggcggca 777 ||||||||||||||||||||| Sbjct: 2592683 tccccgaggagtacggcggca 2592663 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 150,381,838 Number of extensions: 7584575 Number of successful extensions: 156449 Number of sequences better than 10.0: 58 Number of HSP's gapped: 156440 Number of HSP's successfully gapped: 86 Length of query: 1147 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1124 Effective length of database: 18,503,978,556 Effective search space: 20798471896944 Effective search space used: 20798471896944 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
