ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf105l21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001052913.1| Oryza sativa (japonica cultivar-group) Os02g0234200 (Os02g0234200) mRNA, complete cds Length = 2087 Score = 995 bits (502), Expect = 0.0 Identities = 1114/1318 (84%) Strand = Plus / Plus Query: 251 caagcagtcctcacacccccagtatgatgggaatgtagcagtgcaatttgagagtggcta 310 ||||||| |||| ||||| ||||| |||||| ||| || |||| |||||||| ||||| Sbjct: 310 caagcagccctcgcacccgcagtacgatgggggtgtggctctgcagtttgagagcggcta 369 Query: 311 ctttgttgagacgcttgttgaaggagacaagctcggtgtcacgccccacaccattagggt 370 |||||| |||||||| || ||||| |||||||| || |||||||| |||||||||||||| Sbjct: 370 ctttgtggagacgctcgtggaaggggacaagcttggcgtcacgccacacaccattagggt 429 Query: 371 gtcccaagttgagggcggagagcttcttgcagtagactcaacacatagcaacattgtgcg 430 ||||| |||||||| |||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 430 gtcccctgttgagggtggagagctccttgcagtggactcggcacatagcaacattgtgcg 489 Query: 431 aataaccccaccattatctgaatatagcagggggaggctagttgctggttctttccaggg 490 |||||| || ||| | || || |||||||| || || || |||||||||||||||||||| Sbjct: 490 aataactccgccactgtccgagtatagcagaggaagactggttgctggttctttccaggg 549 Query: 491 gcatgcaggtcatatcgatggtaaacctattgatgcaagattcaagcgccccactggtgt 550 |||| | || ||||| ||||| ||||| | ||||||| ||||||| |||||||| || || Sbjct: 550 gcattctggccatatagatggcaaaccaagtgatgcacgattcaaacgccccacaggcgt 609 Query: 551 tgctgtggatgatacaggaaatgtttacattgctgatacagcaaatttggcaattcggaa 610 ||| |||||||||||||||||||| || |||||||||||||||| || ||||||||||| Sbjct: 610 tgccgtggatgatacaggaaatgtctatgttgctgatacagcaaacttagcaattcggaa 669 Query: 611 gattggcgagtcaggagtgaccactattgctggtggaaaatccaatatcccagggtatac 670 |||||| || |||||||||||||| ||||||||||||||||| || |||||||| |||| Sbjct: 670 gattggggaatcaggagtgaccaccattgctggtggaaaatcaaacatcccaggttatag 729 Query: 671 ggatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgtgaagaa 730 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 730 ggatggtccaagtgaagatgcaaagttctctactgattttgatgtggtatatgtgaagaa 789 Query: 731 aatgtgctctttgttggtcattgaccgtgggaatgctgcccttcggaaaatcgtccttcc 790 ||||||||||||| |||| ||||||||||| |||||||| ||| ||||||| | |||||| Sbjct: 790 aatgtgctctttgctggttattgaccgtggaaatgctgcacttaggaaaattgcccttcc 849 Query: 791 acaagaggactgtacttaccaggatgccacactcctatcttcagatatcatactggttat 850 ||||| || ||||| ||||||||||| || || ||||| |||||||||||| |||| || Sbjct: 850 gcaagaagattgtacctaccaggatgcaactcttctatcgtcagatatcatattggtcat 909 Query: 851 tggtgccgttgtggctggatatctcttttctgtggcacaacacggatttggttcatcaac 910 |||||| ||||| || |||||| | || ||||| | ||||| |||||||| |||||||| Sbjct: 910 tggtgctgttgttgccggatatattttctctgttgtgcaacatggatttgggtcatcaac 969 Query: 911 ttctgaaaagatagaagcatctgaagatgataaacaagagagcagcactgtgggaaagcc 970 | |||||||||| |||||| |||||||||| | || ||||||||||| ||||||||||| Sbjct: 970 tgctgaaaagatcgaagcacctgaagatgagcatcaggagagcagcaccgtgggaaagcc 1029 Query: 971 aactttggttgtcgagagccttaaagaagaatcaagtgctggatggccgtcttttgggac 1030 | |||||||||| |||||||| ||||| || |||||||||| ||||| ||| ||||||| Sbjct: 1030 acctttggttgtggagagcctgaaagaggagccaagtgctgggtggccttctcttgggac 1089 Query: 1031 acttgtttctgatctactgaagcttgctgttgaaggtgtggggaatcttgtgctcagcat 1090 ||| || |||||||||||| |||| | ||||||| |||||||||| | ||||| | Sbjct: 1090 tcttattggtgatctactgaaacttgttattgaaggggtggggaatcagcttctcaggct 1149 Query: 1091 tgccccgttacgcatgcaacatgtgaagagaaagacaggcctcactcctctcaaagatag 1150 | ||| | |||| ||||||||| ||||||||| |||| ||||||||| |||||||| || Sbjct: 1150 cgtcccatcacgcctgcaacatgggaagagaaaaacagacctcactccactcaaagacag 1209 Query: 1151 gcttgtgatcccggagggcagggaggagaccccagtagcccagaagctcagtagcacccc 1210 ||||||||| || || | || |||||||||||||||||||||||| | |||||||| || Sbjct: 1210 gcttgtgatgcctgaagacacagaggagaccccagtagcccagaagttaagtagcactcc 1269 Query: 1211 aatgataaccgagacgctccatgctcctagtgctgctaacgagactgtggcaaaggctca 1270 ||||| | ||||||| ||||||| ||||| | | ||||| || | | ||||| || Sbjct: 1270 aatgagacccgagacactccatggtcctaacccagtaaacgaaacagcaccgaaggccca 1329 Query: 1271 gaagagcatcaaatcatcgaaattcagggattctactctctcaagcaagcacaggaccac 1330 |||||| |||||||||| ||||| ||||||||||| || ||||||||||||||| || | Sbjct: 1330 gaagagtgtcaaatcatccaaatttagggattctacgctgtcaagcaagcacaggtcctc 1389 Query: 1331 caagagacaggagtacgctgagttctacggttcaaccgagacacctcaagcaagcgtaaa 1390 |||||| ||||| ||||| ||||||||||||||| |||| |||||||||| ||| ||| Sbjct: 1390 caagaggcaggaatacgcggagttctacggttcatccgaaacacctcaagtgagctcaaa 1449 Query: 1391 ggttccaaaagaccggctccgccaccgccatcgggagaagagtggggaggttacctatgg 1450 ||| |||||||| ||||| ||||||||||| ||||||||||||||||| | | ||||| Sbjct: 1450 ggtcccaaaagatcggctacgccaccgccaccgggagaagagtggggaagctgtttatgg 1509 Query: 1451 gactgcacatccagagcctaggccctcagagatgaaagcggcagactacagcgatctgaa 1510 |||| ||||| ||||| | ||| | || |||| | ||||||||||| || | || Sbjct: 1510 gactagtcatccggagcccaagcctgcggaagtgaagcccgcagactacagtgacccaaa 1569 Query: 1511 gtatgatcactacaacatgagaagcaaatatggcgctgacagcggcttcaggtactga 1568 |||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| Sbjct: 1570 gtatgatccctacaacatcagaagcaaatatggtgctgacagcggctacaggtactga 1627 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 184 cagataacatcgtgaggcagctatcgtcggtggtgaagtggccacggg 231 |||||| ||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 228 cagatagcatcgtgaggcagctgtcgtcggtggtgaaatggccgcggg 275
>dbj|AK121405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132G13, full insert sequence Length = 2088 Score = 995 bits (502), Expect = 0.0 Identities = 1114/1318 (84%) Strand = Plus / Plus Query: 251 caagcagtcctcacacccccagtatgatgggaatgtagcagtgcaatttgagagtggcta 310 ||||||| |||| ||||| ||||| |||||| ||| || |||| |||||||| ||||| Sbjct: 311 caagcagccctcgcacccgcagtacgatgggggtgtggctctgcagtttgagagcggcta 370 Query: 311 ctttgttgagacgcttgttgaaggagacaagctcggtgtcacgccccacaccattagggt 370 |||||| |||||||| || ||||| |||||||| || |||||||| |||||||||||||| Sbjct: 371 ctttgtggagacgctcgtggaaggggacaagcttggcgtcacgccacacaccattagggt 430 Query: 371 gtcccaagttgagggcggagagcttcttgcagtagactcaacacatagcaacattgtgcg 430 ||||| |||||||| |||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 431 gtcccctgttgagggtggagagctccttgcagtggactcggcacatagcaacattgtgcg 490 Query: 431 aataaccccaccattatctgaatatagcagggggaggctagttgctggttctttccaggg 490 |||||| || ||| | || || |||||||| || || || |||||||||||||||||||| Sbjct: 491 aataactccgccactgtccgagtatagcagaggaagactggttgctggttctttccaggg 550 Query: 491 gcatgcaggtcatatcgatggtaaacctattgatgcaagattcaagcgccccactggtgt 550 |||| | || ||||| ||||| ||||| | ||||||| ||||||| |||||||| || || Sbjct: 551 gcattctggccatatagatggcaaaccaagtgatgcacgattcaaacgccccacaggcgt 610 Query: 551 tgctgtggatgatacaggaaatgtttacattgctgatacagcaaatttggcaattcggaa 610 ||| |||||||||||||||||||| || |||||||||||||||| || ||||||||||| Sbjct: 611 tgccgtggatgatacaggaaatgtctatgttgctgatacagcaaacttagcaattcggaa 670 Query: 611 gattggcgagtcaggagtgaccactattgctggtggaaaatccaatatcccagggtatac 670 |||||| || |||||||||||||| ||||||||||||||||| || |||||||| |||| Sbjct: 671 gattggggaatcaggagtgaccaccattgctggtggaaaatcaaacatcccaggttatag 730 Query: 671 ggatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgtgaagaa 730 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 731 ggatggtccaagtgaagatgcaaagttctctactgattttgatgtggtatatgtgaagaa 790 Query: 731 aatgtgctctttgttggtcattgaccgtgggaatgctgcccttcggaaaatcgtccttcc 790 ||||||||||||| |||| ||||||||||| |||||||| ||| ||||||| | |||||| Sbjct: 791 aatgtgctctttgctggttattgaccgtggaaatgctgcacttaggaaaattgcccttcc 850 Query: 791 acaagaggactgtacttaccaggatgccacactcctatcttcagatatcatactggttat 850 ||||| || ||||| ||||||||||| || || ||||| |||||||||||| |||| || Sbjct: 851 gcaagaagattgtacctaccaggatgcaactcttctatcgtcagatatcatattggtcat 910 Query: 851 tggtgccgttgtggctggatatctcttttctgtggcacaacacggatttggttcatcaac 910 |||||| ||||| || |||||| | || ||||| | ||||| |||||||| |||||||| Sbjct: 911 tggtgctgttgttgccggatatattttctctgttgtgcaacatggatttgggtcatcaac 970 Query: 911 ttctgaaaagatagaagcatctgaagatgataaacaagagagcagcactgtgggaaagcc 970 | |||||||||| |||||| |||||||||| | || ||||||||||| ||||||||||| Sbjct: 971 tgctgaaaagatcgaagcacctgaagatgagcatcaggagagcagcaccgtgggaaagcc 1030 Query: 971 aactttggttgtcgagagccttaaagaagaatcaagtgctggatggccgtcttttgggac 1030 | |||||||||| |||||||| ||||| || |||||||||| ||||| ||| ||||||| Sbjct: 1031 acctttggttgtggagagcctgaaagaggagccaagtgctgggtggccttctcttgggac 1090 Query: 1031 acttgtttctgatctactgaagcttgctgttgaaggtgtggggaatcttgtgctcagcat 1090 ||| || |||||||||||| |||| | ||||||| |||||||||| | ||||| | Sbjct: 1091 tcttattggtgatctactgaaacttgttattgaaggggtggggaatcagcttctcaggct 1150 Query: 1091 tgccccgttacgcatgcaacatgtgaagagaaagacaggcctcactcctctcaaagatag 1150 | ||| | |||| ||||||||| ||||||||| |||| ||||||||| |||||||| || Sbjct: 1151 cgtcccatcacgcctgcaacatgagaagagaaaaacagacctcactccactcaaagacag 1210 Query: 1151 gcttgtgatcccggagggcagggaggagaccccagtagcccagaagctcagtagcacccc 1210 ||||||||| || || | || |||||||||||||||||||||||| | |||||||| || Sbjct: 1211 gcttgtgatgcctgaagacacagaggagaccccagtagcccagaagttaagtagcactcc 1270 Query: 1211 aatgataaccgagacgctccatgctcctagtgctgctaacgagactgtggcaaaggctca 1270 ||||| | ||||||| ||||||| ||||| | | ||||| || | | ||||| || Sbjct: 1271 aatgagacccgagacactccatggtcctaacccagtaaacgaaacagcaccgaaggccca 1330 Query: 1271 gaagagcatcaaatcatcgaaattcagggattctactctctcaagcaagcacaggaccac 1330 |||||| |||||||||| ||||| ||||||||||| || ||||||||||||||| || | Sbjct: 1331 gaagagtgtcaaatcatccaaatttagggattctacgctgtcaagcaagcacaggtcctc 1390 Query: 1331 caagagacaggagtacgctgagttctacggttcaaccgagacacctcaagcaagcgtaaa 1390 |||||| ||||| ||||| ||||||||||||||| |||| |||||||||| ||| ||| Sbjct: 1391 caagaggcaggaatacgcggagttctacggttcatccgaaacacctcaagtgagctcaaa 1450 Query: 1391 ggttccaaaagaccggctccgccaccgccatcgggagaagagtggggaggttacctatgg 1450 ||| |||||||| ||||| ||||||||||| ||||||||||||||||| | | ||||| Sbjct: 1451 ggtcccaaaagatcggctacgccaccgccaccgggagaagagtggggaagctgtttatgg 1510 Query: 1451 gactgcacatccagagcctaggccctcagagatgaaagcggcagactacagcgatctgaa 1510 |||| ||||| ||||| | ||| | || |||| | ||||||||||| || | || Sbjct: 1511 gactagtcatccggagcccaagcctgcggaagtgaagcccgcagactacagtgacccaaa 1570 Query: 1511 gtatgatcactacaacatgagaagcaaatatggcgctgacagcggcttcaggtactga 1568 |||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| Sbjct: 1571 gtatgatccctacaacatcagaagcaaatatggtgctgacagcggctacaggtactga 1628 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 184 cagataacatcgtgaggcagctatcgtcggtggtgaagtggccacggg 231 |||||| ||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 229 cagatagcatcgtgaggcagctgtcgtcggtggtgaaatggccgcggg 276
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 385 bits (194), Expect = e-103 Identities = 536/650 (82%) Strand = Plus / Plus Query: 919 agatagaagcatctgaagatgataaacaagagagcagcactgtgggaaagccaactttgg 978 |||| |||||| |||||||||| | || ||||||||||| |||||||||||| |||||| Sbjct: 7597859 agatcgaagcacctgaagatgagcatcaggagagcagcaccgtgggaaagccacctttgg 7597918 Query: 979 ttgtcgagagccttaaagaagaatcaagtgctggatggccgtcttttgggacacttgttt 1038 |||| |||||||| ||||| || |||||||||| ||||| ||| ||||||| ||| || Sbjct: 7597919 ttgtggagagcctgaaagaggagccaagtgctgggtggccttctcttgggactcttattg 7597978 Query: 1039 ctgatctactgaagcttgctgttgaaggtgtggggaatcttgtgctcagcattgccccgt 1098 |||||||||||| |||| | ||||||| |||||||||| | ||||| | | ||| | Sbjct: 7597979 gtgatctactgaaacttgttattgaaggggtggggaatcagcttctcaggctcgtcccat 7598038 Query: 1099 tacgcatgcaacatgtgaagagaaagacaggcctcactcctctcaaagataggcttgtga 1158 |||| ||||||||| ||||||||| |||| ||||||||| |||||||| |||||||||| Sbjct: 7598039 cacgcctgcaacatgggaagagaaaaacagacctcactccactcaaagacaggcttgtga 7598098 Query: 1159 tcccggagggcagggaggagaccccagtagcccagaagctcagtagcaccccaatgataa 1218 | || || | || |||||||||||||||||||||||| | |||||||| ||||||| | Sbjct: 7598099 tgcctgaagacacagaggagaccccagtagcccagaagttaagtagcactccaatgagac 7598158 Query: 1219 ccgagacgctccatgctcctagtgctgctaacgagactgtggcaaaggctcagaagagca 1278 ||||||| ||||||| ||||| | | ||||| || | | ||||| |||||||| Sbjct: 7598159 ccgagacactccatggtcctaacccagtaaacgaaacagcaccgaaggcccagaagagtg 7598218 Query: 1279 tcaaatcatcgaaattcagggattctactctctcaagcaagcacaggaccaccaagagac 1338 |||||||||| ||||| ||||||||||| || ||||||||||||||| || ||||||| | Sbjct: 7598219 tcaaatcatccaaatttagggattctacgctgtcaagcaagcacaggtcctccaagaggc 7598278 Query: 1339 aggagtacgctgagttctacggttcaaccgagacacctcaagcaagcgtaaaggttccaa 1398 |||| ||||| ||||||||||||||| |||| |||||||||| ||| |||||| |||| Sbjct: 7598279 aggaatacgcggagttctacggttcatccgaaacacctcaagtgagctcaaaggtcccaa 7598338 Query: 1399 aagaccggctccgccaccgccatcgggagaagagtggggaggttacctatgggactgcac 1458 |||| ||||| ||||||||||| ||||||||||||||||| | | ||||||||| | Sbjct: 7598339 aagatcggctacgccaccgccaccgggagaagagtggggaagctgtttatgggactagtc 7598398 Query: 1459 atccagagcctaggccctcagagatgaaagcggcagactacagcgatctgaagtatgatc 1518 |||| ||||| | ||| | || |||| | ||||||||||| || | |||||||||| Sbjct: 7598399 atccggagcccaagcctgcggaagtgaagcccgcagactacagtgacccaaagtatgatc 7598458 Query: 1519 actacaacatgagaagcaaatatggcgctgacagcggcttcaggtactga 1568 ||||||||| |||||||||||||| ||||||||||||| |||||||||| Sbjct: 7598459 cctacaacatcagaagcaaatatggtgctgacagcggctacaggtactga 7598508 Score = 248 bits (125), Expect = 6e-62 Identities = 191/213 (89%) Strand = Plus / Plus Query: 622 caggagtgaccactattgctggtggaaaatccaatatcccagggtatacggatggtccca 681 ||||||||||||| ||||||||||||||||| || |||||||| |||| ||||||||| | Sbjct: 7596195 caggagtgaccaccattgctggtggaaaatcaaacatcccaggttatagggatggtccaa 7596254 Query: 682 gtgaagatgcaaagttctctactgattttgatgttgtatatgtgaagaaaatgtgctctt 741 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 7596255 gtgaagatgcaaagttctctactgattttgatgtggtatatgtgaagaaaatgtgctctt 7596314 Query: 742 tgttggtcattgaccgtgggaatgctgcccttcggaaaatcgtccttccacaagaggact 801 || |||| ||||||||||| |||||||| ||| ||||||| | |||||| ||||| || | Sbjct: 7596315 tgctggttattgaccgtggaaatgctgcacttaggaaaattgcccttccgcaagaagatt 7596374 Query: 802 gtacttaccaggatgccacactcctatcttcag 834 |||| ||||||||||| || || ||||| |||| Sbjct: 7596375 gtacctaccaggatgcaactcttctatcgtcag 7596407 Score = 161 bits (81), Expect = 1e-35 Identities = 129/145 (88%) Strand = Plus / Plus Query: 292 tgcaatttgagagtggctactttgttgagacgcttgttgaaggagacaagctcggtgtca 351 |||| |||||||| ||||||||||| |||||||| || ||||| |||||||| || |||| Sbjct: 7595077 tgcagtttgagagcggctactttgtggagacgctcgtggaaggggacaagcttggcgtca 7595136 Query: 352 cgccccacaccattagggtgtcccaagttgagggcggagagcttcttgcagtagactcaa 411 |||| ||||||||||||||||||| |||||||| |||||||| |||||||| ||||| Sbjct: 7595137 cgccacacaccattagggtgtcccctgttgagggtggagagctccttgcagtggactcgg 7595196 Query: 412 cacatagcaacattgtgcgaataac 436 ||||||||||||||||||||||||| Sbjct: 7595197 cacatagcaacattgtgcgaataac 7595221 Score = 159 bits (80), Expect = 4e-35 Identities = 149/172 (86%) Strand = Plus / Plus Query: 454 atagcagggggaggctagttgctggttctttccaggggcatgcaggtcatatcgatggta 513 ||||||| || || || |||||||||||||||||||||||| | || ||||| ||||| | Sbjct: 7595716 atagcagaggaagactggttgctggttctttccaggggcattctggccatatagatggca 7595775 Query: 514 aacctattgatgcaagattcaagcgccccactggtgttgctgtggatgatacaggaaatg 573 |||| | ||||||| ||||||| |||||||| || ||||| ||||||||||||||||||| Sbjct: 7595776 aaccaagtgatgcacgattcaaacgccccacaggcgttgccgtggatgatacaggaaatg 7595835 Query: 574 tttacattgctgatacagcaaatttggcaattcggaagattggcgagtcagg 625 | || |||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 7595836 tctatgttgctgatacagcaaacttagcaattcggaagattggggaatcagg 7595887 Score = 65.9 bits (33), Expect = 5e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 832 cagatatcatactggttattggtgccgttgtggctggatatctcttttctgtggcacaac 891 ||||||||||| |||| |||||||| ||||| || |||||| | || ||||| | |||| Sbjct: 7597513 cagatatcatattggtcattggtgctgttgttgccggatatattttctctgttgtgcaac 7597572 Query: 892 acggatttggttcatcaacttctgaaaag 920 | |||||||| ||||||||| |||||||| Sbjct: 7597573 atggatttgggtcatcaactgctgaaaag 7597601 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 184 cagataacatcgtgaggcagctatcgtcggtggtgaagtggccacggg 231 |||||| ||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 7594406 cagatagcatcgtgaggcagctgtcgtcggtggtgaaatggccgcggg 7594453 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 932 tgaagatgataaacaagagag 952 ||||||||||||||||||||| Sbjct: 5631928 tgaagatgataaacaagagag 5631908 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 672 gatggtcccagtgaagatgcaaagttctctactgattttga 712 ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 30448286 gatggaccaagtgatgatgcaaaattttctactgattttga 30448326
>dbj|AP004030.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_E05 Length = 101333 Score = 385 bits (194), Expect = e-103 Identities = 536/650 (82%) Strand = Plus / Plus Query: 919 agatagaagcatctgaagatgataaacaagagagcagcactgtgggaaagccaactttgg 978 |||| |||||| |||||||||| | || ||||||||||| |||||||||||| |||||| Sbjct: 14619 agatcgaagcacctgaagatgagcatcaggagagcagcaccgtgggaaagccacctttgg 14678 Query: 979 ttgtcgagagccttaaagaagaatcaagtgctggatggccgtcttttgggacacttgttt 1038 |||| |||||||| ||||| || |||||||||| ||||| ||| ||||||| ||| || Sbjct: 14679 ttgtggagagcctgaaagaggagccaagtgctgggtggccttctcttgggactcttattg 14738 Query: 1039 ctgatctactgaagcttgctgttgaaggtgtggggaatcttgtgctcagcattgccccgt 1098 |||||||||||| |||| | ||||||| |||||||||| | ||||| | | ||| | Sbjct: 14739 gtgatctactgaaacttgttattgaaggggtggggaatcagcttctcaggctcgtcccat 14798 Query: 1099 tacgcatgcaacatgtgaagagaaagacaggcctcactcctctcaaagataggcttgtga 1158 |||| ||||||||| ||||||||| |||| ||||||||| |||||||| |||||||||| Sbjct: 14799 cacgcctgcaacatgggaagagaaaaacagacctcactccactcaaagacaggcttgtga 14858 Query: 1159 tcccggagggcagggaggagaccccagtagcccagaagctcagtagcaccccaatgataa 1218 | || || | || |||||||||||||||||||||||| | |||||||| ||||||| | Sbjct: 14859 tgcctgaagacacagaggagaccccagtagcccagaagttaagtagcactccaatgagac 14918 Query: 1219 ccgagacgctccatgctcctagtgctgctaacgagactgtggcaaaggctcagaagagca 1278 ||||||| ||||||| ||||| | | ||||| || | | ||||| |||||||| Sbjct: 14919 ccgagacactccatggtcctaacccagtaaacgaaacagcaccgaaggcccagaagagtg 14978 Query: 1279 tcaaatcatcgaaattcagggattctactctctcaagcaagcacaggaccaccaagagac 1338 |||||||||| ||||| ||||||||||| || ||||||||||||||| || ||||||| | Sbjct: 14979 tcaaatcatccaaatttagggattctacgctgtcaagcaagcacaggtcctccaagaggc 15038 Query: 1339 aggagtacgctgagttctacggttcaaccgagacacctcaagcaagcgtaaaggttccaa 1398 |||| ||||| ||||||||||||||| |||| |||||||||| ||| |||||| |||| Sbjct: 15039 aggaatacgcggagttctacggttcatccgaaacacctcaagtgagctcaaaggtcccaa 15098 Query: 1399 aagaccggctccgccaccgccatcgggagaagagtggggaggttacctatgggactgcac 1458 |||| ||||| ||||||||||| ||||||||||||||||| | | ||||||||| | Sbjct: 15099 aagatcggctacgccaccgccaccgggagaagagtggggaagctgtttatgggactagtc 15158 Query: 1459 atccagagcctaggccctcagagatgaaagcggcagactacagcgatctgaagtatgatc 1518 |||| ||||| | ||| | || |||| | ||||||||||| || | |||||||||| Sbjct: 15159 atccggagcccaagcctgcggaagtgaagcccgcagactacagtgacccaaagtatgatc 15218 Query: 1519 actacaacatgagaagcaaatatggcgctgacagcggcttcaggtactga 1568 ||||||||| |||||||||||||| ||||||||||||| |||||||||| Sbjct: 15219 cctacaacatcagaagcaaatatggtgctgacagcggctacaggtactga 15268 Score = 248 bits (125), Expect = 6e-62 Identities = 191/213 (89%) Strand = Plus / Plus Query: 622 caggagtgaccactattgctggtggaaaatccaatatcccagggtatacggatggtccca 681 ||||||||||||| ||||||||||||||||| || |||||||| |||| ||||||||| | Sbjct: 12955 caggagtgaccaccattgctggtggaaaatcaaacatcccaggttatagggatggtccaa 13014 Query: 682 gtgaagatgcaaagttctctactgattttgatgttgtatatgtgaagaaaatgtgctctt 741 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 13015 gtgaagatgcaaagttctctactgattttgatgtggtatatgtgaagaaaatgtgctctt 13074 Query: 742 tgttggtcattgaccgtgggaatgctgcccttcggaaaatcgtccttccacaagaggact 801 || |||| ||||||||||| |||||||| ||| ||||||| | |||||| ||||| || | Sbjct: 13075 tgctggttattgaccgtggaaatgctgcacttaggaaaattgcccttccgcaagaagatt 13134 Query: 802 gtacttaccaggatgccacactcctatcttcag 834 |||| ||||||||||| || || ||||| |||| Sbjct: 13135 gtacctaccaggatgcaactcttctatcgtcag 13167 Score = 161 bits (81), Expect = 1e-35 Identities = 129/145 (88%) Strand = Plus / Plus Query: 292 tgcaatttgagagtggctactttgttgagacgcttgttgaaggagacaagctcggtgtca 351 |||| |||||||| ||||||||||| |||||||| || ||||| |||||||| || |||| Sbjct: 11837 tgcagtttgagagcggctactttgtggagacgctcgtggaaggggacaagcttggcgtca 11896 Query: 352 cgccccacaccattagggtgtcccaagttgagggcggagagcttcttgcagtagactcaa 411 |||| ||||||||||||||||||| |||||||| |||||||| |||||||| ||||| Sbjct: 11897 cgccacacaccattagggtgtcccctgttgagggtggagagctccttgcagtggactcgg 11956 Query: 412 cacatagcaacattgtgcgaataac 436 ||||||||||||||||||||||||| Sbjct: 11957 cacatagcaacattgtgcgaataac 11981 Score = 159 bits (80), Expect = 4e-35 Identities = 149/172 (86%) Strand = Plus / Plus Query: 454 atagcagggggaggctagttgctggttctttccaggggcatgcaggtcatatcgatggta 513 ||||||| || || || |||||||||||||||||||||||| | || ||||| ||||| | Sbjct: 12476 atagcagaggaagactggttgctggttctttccaggggcattctggccatatagatggca 12535 Query: 514 aacctattgatgcaagattcaagcgccccactggtgttgctgtggatgatacaggaaatg 573 |||| | ||||||| ||||||| |||||||| || ||||| ||||||||||||||||||| Sbjct: 12536 aaccaagtgatgcacgattcaaacgccccacaggcgttgccgtggatgatacaggaaatg 12595 Query: 574 tttacattgctgatacagcaaatttggcaattcggaagattggcgagtcagg 625 | || |||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 12596 tctatgttgctgatacagcaaacttagcaattcggaagattggggaatcagg 12647 Score = 65.9 bits (33), Expect = 5e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 832 cagatatcatactggttattggtgccgttgtggctggatatctcttttctgtggcacaac 891 ||||||||||| |||| |||||||| ||||| || |||||| | || ||||| | |||| Sbjct: 14273 cagatatcatattggtcattggtgctgttgttgccggatatattttctctgttgtgcaac 14332 Query: 892 acggatttggttcatcaacttctgaaaag 920 | |||||||| ||||||||| |||||||| Sbjct: 14333 atggatttgggtcatcaactgctgaaaag 14361 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 184 cagataacatcgtgaggcagctatcgtcggtggtgaagtggccacggg 231 |||||| ||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 11166 cagatagcatcgtgaggcagctgtcgtcggtggtgaaatggccgcggg 11213
>gb|AY106374.1| Zea mays PCO070168 mRNA sequence Length = 755 Score = 333 bits (168), Expect = 1e-87 Identities = 324/376 (86%) Strand = Plus / Plus Query: 507 gatggtaaacctattgatgcaagattcaagcgccccactggtgttgctgtggatgataca 566 ||||||||||| | |||||| |||||||||||||||| || ||||| |||||||||| Sbjct: 15 gatggtaaaccaagtgatgcccgattcaagcgccccacaggcgttgccgtggatgatatg 74 Query: 567 ggaaatgtttacattgctgatacagcaaatttggcaattcggaagattggcgagtcagga 626 || |||||||| |||||||||||||||| ||||| ||||| |||||||| || |||||| Sbjct: 75 ggcaatgtttatgttgctgatacagcaaacttggcgattcgaaagattggagaatcagga 134 Query: 627 gtgaccactattgctggtggaaaatccaatatcccagggtatacggatggtcccagtgaa 686 |||||||| || || ||||| ||||| ||||||||||| || | |||||| ||||||||| Sbjct: 135 gtgaccaccatagcgggtggtaaatcgaatatcccaggatacagggatggccccagtgaa 194 Query: 687 gatgcaaagttctctactgattttgatgttgtatatgtgaagaaaatgtgctctttgttg 746 ||||||||||||||||| ||||||||||| || ||||||||||||||||| ||| | || Sbjct: 195 gatgcaaagttctctacagattttgatgtggtgtatgtgaagaaaatgtgttctcttctg 254 Query: 747 gtcattgaccgtgggaatgctgcccttcggaaaatcgtccttccacaagaggactgtact 806 || ||||||||||| ||||| |||||| |||| || ||||||||||| ||||||||| Sbjct: 255 gttattgaccgtggaaatgcagcccttaggaagatttctcttccacaagaagactgtact 314 Query: 807 taccaggatgccacactcctatcttcagatatcatactggttattggtgccgttgtggct 866 ||||||||| | ||||||||||||||||| ||||| |||| |||||||| ||||||||| Sbjct: 315 taccaggattctgcactcctatcttcagatctcatattggtcattggtgctgttgtggct 374 Query: 867 ggatatctcttttctg 882 |||||| |||| |||| Sbjct: 375 ggatatatcttctctg 390 Score = 42.1 bits (21), Expect = 7.2 Identities = 66/81 (81%) Strand = Plus / Plus Query: 1100 acgcatgcaacatgtgaagagaaagacaggcctcactcctctcaaagataggcttgtgat 1159 |||||||||||| | |||||| ||||||| ||||| || |||| || ||||| ||||| Sbjct: 608 acgcatgcaacacgggaagaggaagacagatctcaccccgctcagggacaggctggtgat 667 Query: 1160 cccggagggcagggaggagac 1180 || |||| ||| |||||||| Sbjct: 668 gcccgaggacagagaggagac 688
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 248 bits (125), Expect = 6e-62 Identities = 191/213 (89%) Strand = Plus / Plus Query: 622 caggagtgaccactattgctggtggaaaatccaatatcccagggtatacggatggtccca 681 ||||||||||||| ||||||||||||||||| || |||||||| |||| ||||||||| | Sbjct: 189901 caggagtgaccaccattgctggtggaaaatcaaacatcccaggttatagggatggtccaa 189960 Query: 682 gtgaagatgcaaagttctctactgattttgatgttgtatatgtgaagaaaatgtgctctt 741 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 189961 gtgaagatgcaaagttctctactgattttgatgtggtatatgtgaagaaaatgtgctctt 190020 Query: 742 tgttggtcattgaccgtgggaatgctgcccttcggaaaatcgtccttccacaagaggact 801 || |||| ||||||||||| |||||||| ||| ||||||| | |||||| ||||| || | Sbjct: 190021 tgctggttattgaccgtggaaatgctgcacttaggaaaattgcccttccgcaagaagatt 190080 Query: 802 gtacttaccaggatgccacactcctatcttcag 834 |||| ||||||||||| || || ||||| |||| Sbjct: 190081 gtacctaccaggatgcaactcttctatcgtcag 190113 Score = 161 bits (81), Expect = 1e-35 Identities = 129/145 (88%) Strand = Plus / Plus Query: 292 tgcaatttgagagtggctactttgttgagacgcttgttgaaggagacaagctcggtgtca 351 |||| |||||||| ||||||||||| |||||||| || ||||| |||||||| || |||| Sbjct: 188783 tgcagtttgagagcggctactttgtggagacgctcgtggaaggggacaagcttggcgtca 188842 Query: 352 cgccccacaccattagggtgtcccaagttgagggcggagagcttcttgcagtagactcaa 411 |||| ||||||||||||||||||| |||||||| |||||||| |||||||| ||||| Sbjct: 188843 cgccacacaccattagggtgtcccctgttgagggtggagagctccttgcagtggactcgg 188902 Query: 412 cacatagcaacattgtgcgaataac 436 ||||||||||||||||||||||||| Sbjct: 188903 cacatagcaacattgtgcgaataac 188927 Score = 159 bits (80), Expect = 4e-35 Identities = 149/172 (86%) Strand = Plus / Plus Query: 454 atagcagggggaggctagttgctggttctttccaggggcatgcaggtcatatcgatggta 513 ||||||| || || || |||||||||||||||||||||||| | || ||||| ||||| | Sbjct: 189422 atagcagaggaagactggttgctggttctttccaggggcattctggccatatagatggca 189481 Query: 514 aacctattgatgcaagattcaagcgccccactggtgttgctgtggatgatacaggaaatg 573 |||| | ||||||| ||||||| |||||||| || ||||| ||||||||||||||||||| Sbjct: 189482 aaccaagtgatgcacgattcaaacgccccacaggcgttgccgtggatgatacaggaaatg 189541 Query: 574 tttacattgctgatacagcaaatttggcaattcggaagattggcgagtcagg 625 | || |||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 189542 tctatgttgctgatacagcaaacttagcaattcggaagattggggaatcagg 189593 Score = 65.9 bits (33), Expect = 5e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 832 cagatatcatactggttattggtgccgttgtggctggatatctcttttctgtggcacaac 891 ||||||||||| |||| |||||||| ||||| || |||||| | || ||||| | |||| Sbjct: 191219 cagatatcatattggtcattggtgctgttgttgccggatatattttctctgttgtgcaac 191278 Query: 892 acggatttggttcatcaacttctgaaaag 920 | |||||||| ||||||||| |||||||| Sbjct: 191279 atggatttgggtcatcaactgctgaaaag 191307 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 184 cagataacatcgtgaggcagctatcgtcggtggtgaagtggccacggg 231 |||||| ||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 188112 cagatagcatcgtgaggcagctgtcgtcggtggtgaaatggccgcggg 188159
>ref|NM_202586.1| Arabidopsis thaliana unknown protein (AT3G14860) mRNA, complete cds Length = 1790 Score = 71.9 bits (36), Expect = 8e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 609 aagattggcgagtcaggagtgaccactattgctggtggaaaatccaatatcccagggtat 668 |||||||| || ||||| || || || || ||||| |||||||| ||||| | |||||| Sbjct: 597 aagattggtgattcaggtgttactacgatagctgggggaaaatcaaatatagctgggtat 656 Query: 669 acggatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgt 724 | ||||| || ||||| |||||||||||||| | |||||||||||| |||||||| Sbjct: 657 agagatgggccaagtgaggatgcaaagttctcaaatgattttgatgtcgtatatgt 712
>ref|NM_112348.3| Arabidopsis thaliana unknown protein (AT3G14860) mRNA, complete cds Length = 1800 Score = 71.9 bits (36), Expect = 8e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 609 aagattggcgagtcaggagtgaccactattgctggtggaaaatccaatatcccagggtat 668 |||||||| || ||||| || || || || ||||| |||||||| ||||| | |||||| Sbjct: 610 aagattggtgattcaggtgttactacgatagctgggggaaaatcaaatatagctgggtat 669 Query: 669 acggatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgt 724 | ||||| || ||||| |||||||||||||| | |||||||||||| |||||||| Sbjct: 670 agagatgggccaagtgaggatgcaaagttctcaaatgattttgatgtcgtatatgt 725
>gb|AY093056.1| Arabidopsis thaliana unknown protein (At3g14860) mRNA, complete cds Length = 1780 Score = 71.9 bits (36), Expect = 8e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 609 aagattggcgagtcaggagtgaccactattgctggtggaaaatccaatatcccagggtat 668 |||||||| || ||||| || || || || ||||| |||||||| ||||| | |||||| Sbjct: 610 aagattggtgattcaggtgttactacgatagctgggggaaaatcaaatatagctgggtat 669 Query: 669 acggatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgt 724 | ||||| || ||||| |||||||||||||| | |||||||||||| |||||||| Sbjct: 670 agagatgggccaagtgaggatgcaaagttctcaaatgattttgatgtcgtatatgt 725
>gb|BT002079.1| Arabidopsis thaliana unknown protein (At3g14860) mRNA, complete cds Length = 1555 Score = 71.9 bits (36), Expect = 8e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 609 aagattggcgagtcaggagtgaccactattgctggtggaaaatccaatatcccagggtat 668 |||||||| || ||||| || || || || ||||| |||||||| ||||| | |||||| Sbjct: 523 aagattggtgattcaggtgttactacgatagctgggggaaaatcaaatatagctgggtat 582 Query: 669 acggatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgt 724 | ||||| || ||||| |||||||||||||| | |||||||||||| |||||||| Sbjct: 583 agagatgggccaagtgaggatgcaaagttctcaaatgattttgatgtcgtatatgt 638
>dbj|AP002061.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T21E2 Length = 47466 Score = 67.9 bits (34), Expect = 1e-07 Identities = 73/86 (84%) Strand = Plus / Minus Query: 639 gctggtggaaaatccaatatcccagggtatacggatggtcccagtgaagatgcaaagttc 698 ||||| |||||||| ||||| | ||||||| ||||| || ||||| |||||||||||| Sbjct: 43220 gctgggggaaaatcaaatatagctgggtatagagatgggccaagtgaggatgcaaagttc 43161 Query: 699 tctactgattttgatgttgtatatgt 724 || | |||||||||||| |||||||| Sbjct: 43160 tcaaatgattttgatgtcgtatatgt 43135
>emb|BX822871.1|CNS0A7B1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1664 Score = 67.9 bits (34), Expect = 1e-07 Identities = 73/86 (84%) Strand = Plus / Plus Query: 639 gctggtggaaaatccaatatcccagggtatacggatggtcccagtgaagatgcaaagttc 698 ||||| |||||||| ||||| | ||||||| ||||| || ||||| |||||||||||| Sbjct: 627 gctgggggaaaatcaaatatagctgggtatagagatgggccaagtgaggatgcaaagttc 686 Query: 699 tctactgattttgatgttgtatatgt 724 || | |||||||||||| |||||||| Sbjct: 687 tcaaatgattttgatgtcgtatatgt 712
>ref|NM_102236.2| Arabidopsis thaliana unknown protein (AT1G23880) mRNA, complete cds Length = 2215 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 671 ggatggtcccagtgaagatgcaaagttctctactgattttgatgttgt 718 ||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 1221 ggatggtccaagtgaagatgcaaagttttcaaatgattttgatgttgt 1268
>gb|AY101522.1| Arabidopsis thaliana At1g23880/T23E23_8 mRNA, complete cds Length = 1638 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 671 ggatggtcccagtgaagatgcaaagttctctactgattttgatgttgt 718 ||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 753 ggatggtccaagtgaagatgcaaagttttcaaatgattttgatgttgt 800
>gb|AY075650.1| Arabidopsis thaliana At1g23880/T23E23_8 mRNA, complete cds Length = 2780 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 671 ggatggtcccagtgaagatgcaaagttctctactgattttgatgttgt 718 ||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 1786 ggatggtccaagtgaagatgcaaagttttcaaatgattttgatgttgt 1833
>gb|AC002423.3|AC002423 Genomic sequence for Arabidopsis thaliana BAC T23E23, complete sequence Length = 99254 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 671 ggatggtcccagtgaagatgcaaagttctctactgattttgatgttgt 718 ||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 12026 ggatggtccaagtgaagatgcaaagttttcaaatgattttgatgttgt 12073
>ref|NM_180643.1| Arabidopsis thaliana unknown protein (AT1G70280) mRNA, complete cds Length = 2043 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 671 ggatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgt 724 |||||| || ||||||||||||||||| || | ||||||||||||||| ||||| Sbjct: 887 ggatggaccaagtgaagatgcaaagttttcaaatgattttgatgttgtttatgt 940
>ref|NM_105696.3| Arabidopsis thaliana unknown protein (AT1G70280) mRNA, complete cds Length = 1958 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 671 ggatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgt 724 |||||| || ||||||||||||||||| || | ||||||||||||||| ||||| Sbjct: 802 ggatggaccaagtgaagatgcaaagttttcaaatgattttgatgttgtttatgt 855
>gb|AY114666.1| Arabidopsis thaliana unknown protein (At1g70280) mRNA, complete cds Length = 1444 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 671 ggatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgt 724 |||||| || ||||||||||||||||| || | ||||||||||||||| ||||| Sbjct: 381 ggatggaccaagtgaagatgcaaagttttcaaatgattttgatgttgtttatgt 434
>gb|AY062688.1| Arabidopsis thaliana Unknown protein (At1g70280; F17O7.19) mRNA, complete cds Length = 2042 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 671 ggatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgt 724 |||||| || ||||||||||||||||| || | ||||||||||||||| ||||| Sbjct: 887 ggatggaccaagtgaagatgcaaagttttcaaatgattttgatgttgtttatgt 940
>dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT40O02, TM0111b, complete sequence Length = 92724 Score = 60.0 bits (30), Expect = 3e-05 Identities = 81/98 (82%) Strand = Plus / Minus Query: 627 gtgaccactattgctggtggaaaatccaatatcccagggtatacggatggtcccagtgaa 686 ||||| || |||||||| ||||| || ||| | |||| |||| ||| ||||| ||||| Sbjct: 70403 gtgacaaccattgctggaggaaagtcaaatgttgcaggctatagggacggtcctagtgag 70344 Query: 687 gatgcaaagttctctactgattttgatgttgtatatgt 724 ||||| |||||||| | |||||||||||| |||||||| Sbjct: 70343 gatgctaagttctccaatgattttgatgtggtatatgt 70306
>gb|AC003671.1|F17O7 Arabidopsis thaliana chromosome 1 BAC F17O7 complete sequence Length = 92128 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 671 ggatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgt 724 |||||| || ||||||||||||||||| || | ||||||||||||||| ||||| Sbjct: 87413 ggatggaccaagtgaagatgcaaagttttcaaatgattttgatgttgtttatgt 87466
>emb|BX816813.1|CNS0AD2S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1487 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 672 gatggtcccagtgaagatgcaaagttctctactgattttgatgttgtatatgt 724 ||||| || ||||||||||||||||| || | ||||||||||||||| ||||| Sbjct: 366 gatggaccaagtgaagatgcaaagttttcaaatgattttgatgttgtttatgt 418
>dbj|AK156643.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830034K01 product:unclassifiable, full insert sequence Length = 3782 Score = 46.1 bits (23), Expect = 0.46 Identities = 26/27 (96%) Strand = Plus / Plus Query: 706 attttgatgttgtatatgtgaagaaaa 732 ||||||||||||| ||||||||||||| Sbjct: 1695 attttgatgttgtctatgtgaagaaaa 1721
>emb|BX548010.5| Mouse DNA sequence from clone RP23-22P24 on chromosome X, complete sequence Length = 192853 Score = 46.1 bits (23), Expect = 0.46 Identities = 26/27 (96%) Strand = Plus / Minus Query: 706 attttgatgttgtatatgtgaagaaaa 732 ||||||||||||| ||||||||||||| Sbjct: 121845 attttgatgttgtctatgtgaagaaaa 121819
>gb|AC034206.4| Homo sapiens chromosome 5 clone CTC-321K16, complete sequence Length = 108123 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1548 gacagcggcttcaggtactgactgat 1573 ||||||| |||||||||||||||||| Sbjct: 39309 gacagcgccttcaggtactgactgat 39334
>dbj|BS000057.1| Pan troglodytes chromosome 22 clone:RP43-020J03, map 22, complete sequences Length = 185342 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 724 tgaagaaaatgtgctctttgtt 745 |||||||||||||||||||||| Sbjct: 153392 tgaagaaaatgtgctctttgtt 153371
>gb|AC005738.1|AC005738 Homo sapiens chromosome 5, BAC clone 7g12 (LBNL H126), complete sequence Length = 134506 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1548 gacagcggcttcaggtactgactgat 1573 ||||||| |||||||||||||||||| Sbjct: 132853 gacagcgccttcaggtactgactgat 132878
>ref|NM_001063891.1| Oryza sativa (japonica cultivar-group) Os06g0269300 (Os06g0269300) mRNA, complete cds Length = 2123 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 672 gatggtcccagtgaagatgcaaagttctctactgattttga 712 ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 870 gatgggccaagtgatgatgcaaaattttctactgattttga 910
>ref|NM_001054548.1| Oryza sativa (japonica cultivar-group) Os02g0730400 (Os02g0730400) mRNA, complete cds Length = 1886 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 672 gatggtcccagtgaagatgcaaagttctctactgattttga 712 ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 722 gatggaccaagtgatgatgcaaaattttctactgattttga 762
>ref|XR_024935.1| PREDICTED: Pan troglodytes hypothetical protein LOC464235 (LOC464235), mRNA Length = 1423 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1318 agcacaggaccaccaagagac 1338 ||||||||||||||||||||| Sbjct: 83 agcacaggaccaccaagagac 103
>tpe|BN000872.1| TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tttcgcttcccctttctttctccct 35 |||| |||||||||||||||||||| Sbjct: 2109028 tttcccttcccctttctttctccct 2109052
>emb|AM286690.1| Alcanivorax borkumensis SK2, complete genome Length = 3120143 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcaccagaagcggcagcgcca 71 ||||||||||||||||||||| Sbjct: 354156 tcaccagaagcggcagcgcca 354136
>gb|AC148873.2| Chlamydomonas reinhardtii clone cr-7K15, complete sequence Length = 42238 Score = 42.1 bits (21), Expect = 7.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 121 tcgtcatcgcgctcctcctctgcgtcgtcctcc 153 |||||||||| ||||||||| ||||||||||| Sbjct: 34865 tcgtcatcgccctcctcctcctcgtcgtcctcc 34897
>gb|AC022868.10| Homo sapiens chromosome 8, clone RP11-367E12, complete sequence Length = 166018 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1318 agcacaggaccaccaagagac 1338 ||||||||||||||||||||| Sbjct: 87516 agcacaggaccaccaagagac 87536
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 672 gatggtcccagtgaagatgcaaagttctctactgattttga 712 ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 8989992 gatgggccaagtgatgatgcaaaattttctactgattttga 8989952
>gb|AC073563.3| Mus musculus strain C57BL/6J chromosome 12 clone RP23-24I12, complete sequence Length = 205468 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tttcgcttcccctttctttctccct 35 |||| |||||||||||||||||||| Sbjct: 195801 tttcccttcccctttctttctccct 195825
>emb|AL354833.9| Human DNA sequence from clone RP11-157L14 on chromosome 13 Contains an olfactory receptor pseudogene, a novel gene (RGC32), the 3' end of a novel gene (contains KIAA0564 and FLJ21779) possible ortholog of RIKEN cDNA 1300010F03 gene, and 2 CpG islands, complete sequence Length = 158871 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 agagcttcttgcagtagactc 409 ||||||||||||||||||||| Sbjct: 100391 agagcttcttgcagtagactc 100411
>emb|AL157759.16| Human DNA sequence from clone RP11-107L16 on chromosome 13, complete sequence Length = 83552 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1117 agagaaagacaggcctcactc 1137 ||||||||||||||||||||| Sbjct: 24442 agagaaagacaggcctcactc 24422
>gb|AC079273.5| Mus musculus strain C57BL/6J chromosome 12 clone RP23-373N04, complete sequence Length = 175987 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tttcgcttcccctttctttctccct 35 |||| |||||||||||||||||||| Sbjct: 148795 tttcccttcccctttctttctccct 148771
>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0084K06 Length = 177895 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 672 gatggtcccagtgaagatgcaaagttctctactgattttga 712 ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 37310 gatgggccaagtgatgatgcaaaattttctactgattttga 37270
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 672 gatggtcccagtgaagatgcaaagttctctactgattttga 712 ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 129146 gatggaccaagtgatgatgcaaaattttctactgattttga 129186
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 672 gatggtcccagtgaagatgcaaagttctctactgattttga 712 ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 54334 gatggaccaagtgatgatgcaaaattttctactgattttga 54374
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 932 tgaagatgataaacaagagag 952 ||||||||||||||||||||| Sbjct: 59664 tgaagatgataaacaagagag 59644
>dbj|AK122070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117I22, full insert sequence Length = 2126 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 672 gatggtcccagtgaagatgcaaagttctctactgattttga 712 ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 871 gatgggccaagtgatgatgcaaaattttctactgattttga 911
>dbj|AK101253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032F08, full insert sequence Length = 1889 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 672 gatggtcccagtgaagatgcaaagttctctactgattttga 712 ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 723 gatggaccaagtgatgatgcaaaattttctactgattttga 763
>dbj|AK064807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D18, full insert sequence Length = 1896 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 672 gatggtcccagtgaagatgcaaagttctctactgattttga 712 ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 724 gatgggccaagtgatgatgcaaaattttctactgattttga 764
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1402 accggctccgccaccgccatc 1422 ||||||||||||||||||||| Sbjct: 4779081 accggctccgccaccgccatc 4779101
>gb|AC134862.4| Mus musculus BAC clone RP24-91P2 from 5, complete sequence Length = 205726 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1664 cacaaggatgctgctcatggg 1684 ||||||||||||||||||||| Sbjct: 114252 cacaaggatgctgctcatggg 114272
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial variable region, strain 129/Sv Length = 1382053 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tttcgcttcccctttctttctccct 35 |||| |||||||||||||||||||| Sbjct: 255476 tttcccttcccctttctttctccct 255500 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 316,547,512 Number of extensions: 16151857 Number of successful extensions: 303760 Number of sequences better than 10.0: 50 Number of HSP's gapped: 303759 Number of HSP's successfully gapped: 81 Length of query: 1897 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1874 Effective length of database: 18,503,978,556 Effective search space: 34676455813944 Effective search space used: 34676455813944 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
