ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf108h11 |
|---|---|
| Clone Library Name | barley_pub |
>P38718:BR44_RAT Brain protein 44 - Rattus norvegicus (Rat)| Length = 127 Score = 109 bits (273), Expect = 1e-23 Identities = 47/90 (52%), Positives = 62/90 (68%) Frame = +1 Query: 172 MASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWS 351 + KL+ L+NHPAGP+T+ FWAP KWG+ A +AD A+P EK+S Q + TG +WS Sbjct: 24 LPKKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWS 83 Query: 352 RYSMVITPKNWNLFSVNVAMAGTGLYQLSR 441 RYS+VI PKNW+LF+VN + G QL R Sbjct: 84 RYSLVIIPKNWSLFAVNFFVGSAGASQLFR 113
>Q9D023:BR44_MOUSE Brain protein 44 - Mus musculus (Mouse)| Length = 127 Score = 109 bits (273), Expect = 1e-23 Identities = 47/90 (52%), Positives = 62/90 (68%) Frame = +1 Query: 172 MASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWS 351 + KL+ L+NHPAGP+T+ FWAP KWG+ A +AD A+P EK+S Q + TG +WS Sbjct: 24 LPKKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWS 83 Query: 352 RYSMVITPKNWNLFSVNVAMAGTGLYQLSR 441 RYS+VI PKNW+LF+VN + G QL R Sbjct: 84 RYSLVIIPKNWSLFAVNFFVGSAGASQLFR 113
>O95563:BR44_HUMAN Brain protein 44 - Homo sapiens (Human)| Length = 127 Score = 109 bits (273), Expect = 1e-23 Identities = 47/90 (52%), Positives = 62/90 (68%) Frame = +1 Query: 172 MASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWS 351 + KL+ L+NHPAGP+T+ FWAP KWG+ A +AD A+P EK+S Q + TG +WS Sbjct: 24 LPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSAVLMATGFIWS 83 Query: 352 RYSMVITPKNWNLFSVNVAMAGTGLYQLSR 441 RYS+VI PKNW+LF+VN + G QL R Sbjct: 84 RYSLVIIPKNWSLFAVNFFVGAAGASQLFR 113
>Q5R4Z3:BR44_PONPY Brain protein 44 - Pongo pygmaeus (Orangutan)| Length = 127 Score = 104 bits (259), Expect = 5e-22 Identities = 46/90 (51%), Positives = 61/90 (67%) Frame = +1 Query: 172 MASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWS 351 + KL+ L+NHPAGP+T+ FWAP K G+ A +AD A+P EK+S Q + TG +WS Sbjct: 24 LPEKLRPLYNHPAGPRTVFFWAPIMKRGLVCAGLADMARPAEKLSTAQSAVLMATGFIWS 83 Query: 352 RYSMVITPKNWNLFSVNVAMAGTGLYQLSR 441 RYS+VI PKNW+LF+VN + G QL R Sbjct: 84 RYSLVIIPKNWSLFAVNFFVGAAGASQLFR 113
>Q09896:YAI9_SCHPO UPF0041 protein C24B11.09 - Schizosaccharomyces pombe (Fission| yeast) Length = 118 Score = 96.7 bits (239), Expect = 1e-19 Identities = 39/82 (47%), Positives = 57/82 (69%) Frame = +1 Query: 196 WNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWSRYSMVITP 375 WNHPAGPKT+HFWAP KW + ++ I D+A+ PE +S Q A+ TG +W+R+S+++ P Sbjct: 10 WNHPAGPKTVHFWAPAMKWTLVLSGIGDYARSPEYLSIRQYAALCATGAIWTRWSLIVRP 69 Query: 376 KNWNLFSVNVAMAGTGLYQLSR 441 KN+ +VN +A G Q+SR Sbjct: 70 KNYFNATVNFFLAIVGAVQVSR 91
>O01578:YXX3_CAEEL UPF0041 protein F53F10.3 - Caenorhabditis elegans| Length = 133 Score = 95.9 bits (237), Expect = 2e-19 Identities = 44/82 (53%), Positives = 56/82 (68%) Frame = +1 Query: 196 WNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWSRYSMVITP 375 WNH AGPKT+ FWAPT KW + A +AD A+P +K+S Q A+ TG +W+RY +VITP Sbjct: 31 WNHAAGPKTVFFWAPTIKWTLIGAGLADLARPADKLSLYQNSALFATGAIWTRYCLVITP 90 Query: 376 KNWNLFSVNVAMAGTGLYQLSR 441 N+ L SVN + TGL QL R Sbjct: 91 INYYLSSVNFFVMCTGLAQLCR 112
>P53311:YG56_YEAST UPF0041 protein YGR243W - Saccharomyces cerevisiae (Baker's yeast)| Length = 146 Score = 92.0 bits (227), Expect = 3e-18 Identities = 39/82 (47%), Positives = 54/82 (65%) Frame = +1 Query: 196 WNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWSRYSMVITP 375 WN GPKT+HFWAPT KWG+ A + D +P EK+S Q +++ T ++W+R+S VI P Sbjct: 14 WNSETGPKTVHFWAPTLKWGLVFAGLNDIKRPVEKVSGAQNLSLLATALIWTRWSFVIKP 73 Query: 376 KNWNLFSVNVAMAGTGLYQLSR 441 KN+ L SVN + T Y L+R Sbjct: 74 KNYLLASVNFFLGCTAGYHLTR 95
>P38857:YHW2_YEAST UPF0041 protein YHR162W - Saccharomyces cerevisiae (Baker's yeast)| Length = 129 Score = 87.8 bits (216), Expect = 5e-17 Identities = 39/82 (47%), Positives = 52/82 (63%) Frame = +1 Query: 196 WNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWSRYSMVITP 375 W GPKT+HFWAPT KWG+ A +D +P EKIS Q +++ T ++W+R+S VI P Sbjct: 14 WQSETGPKTVHFWAPTLKWGLVFAGFSDMKRPVEKISGAQNLSLLSTALIWTRWSFVIKP 73 Query: 376 KNWNLFSVNVAMAGTGLYQLSR 441 +N L SVN + T YQL R Sbjct: 74 RNILLASVNSFLCLTAGYQLGR 95
>P53157:YGI0_YEAST UPF0041 protein YGL080W - Saccharomyces cerevisiae (Baker's yeast)| Length = 130 Score = 58.5 bits (140), Expect = 3e-08 Identities = 31/87 (35%), Positives = 45/87 (51%) Frame = +1 Query: 220 TIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWSRYSMVITPKNWNLFSV 399 T HFW P +GI IA I D K P IS P A+ V+ +Y++ ++PKN+ LF Sbjct: 28 TTHFWGPVSNFGIPIAAIYDLKKDPTLISGPMTFALVTYSGVFMKYALSVSPKNYLLFGC 87 Query: 400 NVAMAGTGLYQLSRKIRKDYFPDDENE 480 ++ L Q R ++ YF DE + Sbjct: 88 HLINETAQLAQGYRFLKYTYFTTDEEK 114
>P63031:BR44L_RAT Brain protein 44-like protein - Rattus norvegicus (Rat)| Length = 109 Score = 57.8 bits (138), Expect = 6e-08 Identities = 28/74 (37%), Positives = 38/74 (51%) Frame = +1 Query: 226 HFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWSRYSMVITPKNWNLFSVNV 405 HFW P WG+ IA I D K PE IS A+ C + + R++ + P+NW LF+ +V Sbjct: 26 HFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFACHV 85 Query: 406 AMAGTGLYQLSRKI 447 L Q R I Sbjct: 86 TNEVAQLIQGGRLI 99
>P63030:BR44L_MOUSE Brain protein 44-like protein - Mus musculus (Mouse)| Length = 109 Score = 57.8 bits (138), Expect = 6e-08 Identities = 28/74 (37%), Positives = 38/74 (51%) Frame = +1 Query: 226 HFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWSRYSMVITPKNWNLFSVNV 405 HFW P WG+ IA I D K PE IS A+ C + + R++ + P+NW LF+ +V Sbjct: 26 HFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFACHV 85 Query: 406 AMAGTGLYQLSRKI 447 L Q R I Sbjct: 86 TNEVAQLIQGGRLI 99
>Q9Y5U8:BR44L_HUMAN Brain protein 44-like protein - Homo sapiens (Human)| Length = 109 Score = 57.4 bits (137), Expect = 7e-08 Identities = 27/77 (35%), Positives = 39/77 (50%) Frame = +1 Query: 226 HFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWSRYSMVITPKNWNLFSVNV 405 HFW P WG+ IA I D K PE IS A+ C + + R++ + P+NW LF+ + Sbjct: 26 HFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFACHA 85 Query: 406 AMAGTGLYQLSRKIRKD 456 L Q R I+ + Sbjct: 86 TNEVAQLIQGGRLIKHE 102
>Q21828:YNFD_CAEEL UPF0041 protein R07E5.13 - Caenorhabditis elegans| Length = 160 Score = 51.6 bits (122), Expect = 4e-06 Identities = 25/78 (32%), Positives = 39/78 (50%) Frame = +1 Query: 226 HFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWSRYSMVITPKNWNLFSVNV 405 HFW P WG+ +A + D K P+ IS P A+ V+ R++ + P+N LF+ + Sbjct: 28 HFWGPVANWGLPLAALGDLKKNPDMISGPMTSALLIYSSVFMRFAWHVQPRNLLLFACHF 87 Query: 406 AMAGTGLYQLSRKIRKDY 459 A QL R + +Y Sbjct: 88 ANFSAQGAQLGRFVNHNY 105
>Q9NQS3:PVRL3_HUMAN Poliovirus receptor-related protein 3 precursor - Homo sapiens| (Human) Length = 549 Score = 35.0 bits (79), Expect = 0.38 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Frame = +1 Query: 214 PKTIHFWAPTFKWGISIANIADFAKPPEKISYPQQIAVACTGVVWSRYSMVITPKNWNLF 393 P T PT +W S A+I D A P+K+ +P ++ T + +++ + LF Sbjct: 358 PPTTTTLQPTIQWHPSTADIEDLATEPKKLPFP--LSTLATIKDDTIATIIASVVGGALF 415 Query: 394 SVNVA-MAGTGLYQLSRKIRKDYF 462 V V+ +AG Y+ R R DYF Sbjct: 416 IVLVSVLAGIFCYRRRRTFRGDYF 439
>P21228:ALCR_EMENI Regulatory protein alcR - Emericella nidulans (Aspergillus| nidulans) Length = 821 Score = 30.8 bits (68), Expect = 7.2 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -1 Query: 113 RDGRRRSWSPEPRNPRGEMGWVSGRQACAW 24 R G+RR +PE RN E GWVS W Sbjct: 16 RKGKRRCDAPENRNEANENGWVSCSNCKRW 45
>P51403:RS2_CAEEL 40S ribosomal protein S2 - Caenorhabditis elegans| Length = 272 Score = 30.4 bits (67), Expect = 9.4 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = +2 Query: 101 GGRPSLPPRTECKGTGKCASI*LKWLQSFKPFGT-ILLAPKP 223 G + LP CK TGKCAS+ ++ + + P GT I+ AP P Sbjct: 167 GNKIGLPHTVPCKVTGKCASVMVRLIPA--PRGTGIVSAPVP 206 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 160,978,903 Number of extensions: 3723106 Number of successful extensions: 9406 Number of sequences better than 10.0: 16 Number of HSP's gapped: 9398 Number of HSP's successfully gapped: 16 Length of query: 286 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 174 Effective length of database: 69,965,399 Effective search space: 12173979426 Effective search space used: 12173979426 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
