ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf105i16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8TX91:TRPB_METKA Tryptophan synthase beta chain - Methanopyrus ... 33 0.72
2A2SJR5:TRMB_METPP tRNA - Methylibium petroleiphilum (strain PM1) 33 0.72
3P13729:SGS3_DROSI Salivary glue protein Sgs-3 precursor - Drosop... 32 1.2
4Q8K031:STAR8_MOUSE StAR-related lipid transfer protein 8 - Mus m... 32 1.6
5Q99014:KPC1_TRIRE Protein kinase C-like - Trichoderma reesei (Hy... 32 1.6
6P27415:VGLB_ILTVS Glycoprotein B precursor - Infectious laryngot... 31 2.7
7O93310:RAD21_XENLA Double-strand-break repair protein rad21 homo... 31 2.7
8P80491:FRHG_METBF Coenzyme F420 hydrogenase subunit gamma - Meth... 30 3.6
9P13828:MSP1_PLAYO Merozoite surface protein 1 precursor - Plasmo... 30 4.7
10Q06820:MDM36_YEAST Mitochondrial distribution and morphology pro... 30 4.7
11Q5ABD9:VPS27_CANAL Vacuolar protein sorting-associated protein 2... 30 6.1
12O15047:SET1A_HUMAN Histone-lysine N-methyltransferase, H3 lysine... 30 6.1
13Q5DU25:IQEC2_MOUSE IQ motif and Sec7 domain-containing protein 2... 30 6.1
14Q5JU85:IQEC2_HUMAN IQ motif and Sec7 domain-containing protein 2... 30 6.1
15Q08193:GAS5_YEAST Glycolipid-anchored surface protein 5 precurso... 30 6.1
16Q75D46:BUR1_ASHGO Serine/threonine-protein kinase BUR1 - Ashbya ... 30 6.1
17O74555:BBP_SCHPO Branchpoint-bridging protein - Schizosaccharomy... 30 6.1
18Q80T21:ATL4_MOUSE ADAMTS-like protein 4 precursor - Mus musculus... 30 6.1
19Q5WEM4:HAM1_BACSK HAM1 protein homolog - Bacillus clausii (strai... 29 7.9

>Q8TX91:TRPB_METKA Tryptophan synthase beta chain - Methanopyrus kandleri|
          Length = 398
 Score = 32.7 bits (73), Expect = 0.72
 Identities = 22/68 (32%), Positives = 35/68 (51%)
 Frame = -2

Query: 352 VAEGDVARAVLVSNDDLGILEILDDHHAVVLVRTLVAHCMLDPRSDVLLAEGSCQGAGER 173
           V + +  R  ++ N+  GIL  L+  HAV  V+ LV    LD R DV++   +  G G++
Sbjct: 329 VTDEEALRGFVMLNETEGILPALESAHAVYYVKKLVERGELD-RGDVVVV--NLSGRGDK 385

Query: 172 RELVVQEE 149
              +  EE
Sbjct: 386 DVRIAAEE 393



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>A2SJR5:TRMB_METPP tRNA - Methylibium petroleiphilum (strain PM1)|
          Length = 469

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 24/69 (34%), Positives = 29/69 (42%)
 Frame = +1

Query: 181 QRPGNSLRPGAHHSLDRACSEPRACAQGLRRDGHQVSPESRGHHC*PAPLSLHPLQRPSP 360
           +R G S R G HH+ D      R   +   R    + P +R     PAPL  H   RP P
Sbjct: 75  RRAGRSHRAGRHHAAD-----DRGLQRVRVRRPQSLPPGARA----PAPLRPHAADRPRP 125

Query: 361 PLPQHRQAA 387
            L   R AA
Sbjct: 126 GLAARRPAA 134



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>P13729:SGS3_DROSI Salivary glue protein Sgs-3 precursor - Drosophila simulans (Fruit|
           fly)
          Length = 217

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 78  TARSSVCGTKSTTSAPSPPALLACSSCTTSSRLSPAPWQLPSARSTS 218
           T  ++   T +TT+  +PP    C S +T++  + AP   P+ +STS
Sbjct: 50  TTTTTTTTTTTTTTTRAPPTKPTCKSTSTTTTTTRAPPTKPTCKSTS 96



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>Q8K031:STAR8_MOUSE StAR-related lipid transfer protein 8 - Mus musculus (Mouse)|
          Length = 1019

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +1

Query: 289 SPESRGHHC*PAPLSLHPLQRPSPPLPQHRQAAS*EARRCCRD 417
           +P+ RGHH    P  +H +QR   PLPQ  Q A    R  C D
Sbjct: 557 TPDYRGHHVFGVPPLIH-VQRTGQPLPQSIQQAMRYLRSQCLD 598



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>Q99014:KPC1_TRIRE Protein kinase C-like - Trichoderma reesei (Hypocrea jecorina)|
          Length = 1139

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 21/91 (23%)
 Frame = +1

Query: 178 PQRPGNSLRPGAHHSLDRACSEPRACAQGLRRDGHQVSPE---SRGHHC*PAPLSLH--- 339
           PQRPG   R  +  S   A S   A AQG  R G+   P+    +GH+    P   H   
Sbjct: 652 PQRPGQPGRAPSDLSAAAAASAAMAAAQG--RTGYDSGPQDPYGQGHYGAAGPAPQHHKY 709

Query: 340 ------------PLQRPS---PPLPQHRQAA 387
                       P Q P+   PP PQ +Q A
Sbjct: 710 NPADYANVDQGFPAQPPAQQRPPQPQQQQQA 740



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>P27415:VGLB_ILTVS Glycoprotein B precursor - Infectious laryngotracheitis virus|
           (strain SA-2) (ILTV)
          Length = 883

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 313 NDDLGILEILDDHHAVVLVRTLVAHCMLDPRSDVLLAE 200
           N +LGIL  L +H+ ++  R L+  CM++ R   LL E
Sbjct: 583 NHNLGILGQLGEHNEILQGRNLIEPCMINHRRYFLLGE 620



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>O93310:RAD21_XENLA Double-strand-break repair protein rad21 homolog - Xenopus laevis|
           (African clawed frog)
          Length = 629

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +1

Query: 196 SLRPGAHHSLDRACSEPRACAQGLRRDGHQVSPESRGHHC*PAPLSLH---PLQRPSPPL 366
           SL  G+   LD     P    QG++RD  Q+ PE       P P+       ++ P PPL
Sbjct: 448 SLMEGSRTHLDDTIMPPPPPKQGVKRDSLQMEPE-------PMPMMQEAEPQIEMPPPPL 500

Query: 367 P 369
           P
Sbjct: 501 P 501



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>P80491:FRHG_METBF Coenzyme F420 hydrogenase subunit gamma - Methanosarcina barkeri|
           (strain Fusaro / DSM 804)
          Length = 259

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = -2

Query: 325 VLVSNDDLGILEILDDHHAVVLVRTLVAHCMLDPRSDVLLAEGS 194
           V +++++LG+++ILDD+  +V   TL A     P  DV L EGS
Sbjct: 20  VSLADNNLGLIKILDDYADLVYCLTL-ADVRHIPEMDVALVEGS 62



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>P13828:MSP1_PLAYO Merozoite surface protein 1 precursor - Plasmodium yoelii yoelii|
          Length = 1772

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +3

Query: 78   TARSSVCGTKSTTSAPSPPALLACSSCTTSSRLSPAPWQLPSARSTS 218
            +A  S     STTS  +PPA  A    T++    PAP Q P+A S S
Sbjct: 1010 SASGSAASNASTTSDVTPPAAAAAVPSTST----PAPAQPPAANSQS 1052



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>Q06820:MDM36_YEAST Mitochondrial distribution and morphology protein 36 -|
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 579

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +3

Query: 87  SSVCGTKSTTSAPSPP---ALLACSSCTTSSRLSPAPWQLPSARSTSLLGSSMQ 239
           SS+    ST ++PSPP   + ++ +   +SSR+S     LP + S+SLL S  Q
Sbjct: 470 SSIISQNSTLASPSPPMSSSFISTAPSQSSSRMS----TLPLSPSSSLLESQSQ 519



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>Q5ABD9:VPS27_CANAL Vacuolar protein sorting-associated protein 27 - Candida albicans|
           (Yeast)
          Length = 841

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 269 GVMVIKYLQNPEVIIANQHRSRYI 340
           G M++KYLQN ++I  NQ + +Y+
Sbjct: 139 GEMILKYLQNWKIIFENQQQLQYV 162



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>O15047:SET1A_HUMAN Histone-lysine N-methyltransferase, H3 lysine-4 specific SET1 -|
           Homo sapiens (Human)
          Length = 1707

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +1

Query: 187 PGNSLRPGAHHSLDRACSEPRA--CAQGLRRDGHQVSPESRGHHC*PAPLSLHPLQRPSP 360
           P  S  PGA     +A  + +A  C+ G   D  ++S + RG    PAP    P Q+P P
Sbjct: 553 PTGSGEPGATRESPKANGQNQASPCSSG---DDMEISDDDRGGSPPPAPT---PPQQPPP 606

Query: 361 PLP 369
           P P
Sbjct: 607 PPP 609



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>Q5DU25:IQEC2_MOUSE IQ motif and Sec7 domain-containing protein 2 - Mus musculus (Mouse)|
          Length = 1478

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 22/77 (28%), Positives = 30/77 (38%)
 Frame = +1

Query: 154  PVQQARAFPQRPGNSLRPGAHHSLDRACSEPRACAQGLRRDGHQVSPESRGHHC*PAPLS 333
            P+ Q  + P  P ++   G H         P      L R G +      G H   AP  
Sbjct: 1289 PLPQLGSIPPPPASAPPVGPHRHFHAHGPVPGPQHYTLGRPG-RAPRRGAGGHPQFAPHG 1347

Query: 334  LHPLQRPSPPLPQHRQA 384
             HPL +P+ PLP +  A
Sbjct: 1348 RHPLHQPTSPLPLYSPA 1364



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>Q5JU85:IQEC2_HUMAN IQ motif and Sec7 domain-containing protein 2 - Homo sapiens (Human)|
          Length = 1478

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 22/77 (28%), Positives = 30/77 (38%)
 Frame = +1

Query: 154  PVQQARAFPQRPGNSLRPGAHHSLDRACSEPRACAQGLRRDGHQVSPESRGHHC*PAPLS 333
            P+ Q  + P  P ++   G H         P      L R G +      G H   AP  
Sbjct: 1289 PLPQLGSIPPPPASAPPVGPHRHFHAHGPVPGPQHYTLGRPG-RAPRRGAGGHPQFAPHG 1347

Query: 334  LHPLQRPSPPLPQHRQA 384
             HPL +P+ PLP +  A
Sbjct: 1348 RHPLHQPTSPLPLYSPA 1364



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>Q08193:GAS5_YEAST Glycolipid-anchored surface protein 5 precursor - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 484

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 19/44 (43%), Positives = 25/44 (56%)
 Frame = +3

Query: 102 TKSTTSAPSPPALLACSSCTTSSRLSPAPWQLPSARSTSLLGSS 233
           T S++S+ S  +  A SS  +SS  S A    PSA  TSLL S+
Sbjct: 404 TSSSSSSSSSSSSSASSSSESSSSTSKASSSSPSASETSLLKSA 447



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>Q75D46:BUR1_ASHGO Serine/threonine-protein kinase BUR1 - Ashbya gossypii (Yeast)|
           (Eremothecium gossypii)
          Length = 753

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +1

Query: 280 HQVSPESRG---HHC*PAPLSLHPLQRPSPPLPQHRQAA 387
           HQ    SRG   H   PAP SL P  +P+PP  ++ + A
Sbjct: 472 HQQQYSSRGPQQHRTTPAPTSLPPKPKPAPPGARYNREA 510



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>O74555:BBP_SCHPO Branchpoint-bridging protein - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 587

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 108 STTSAPSPPALLACSSCTTSSRLSPAPWQLPSA 206
           ++  A  PP   A S+  +SS  SPAPW  P++
Sbjct: 399 ASPQAGHPPPWAAASTSVSSSTSSPAPWAKPAS 431



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>Q80T21:ATL4_MOUSE ADAMTS-like protein 4 precursor - Mus musculus (Mouse)|
          Length = 1036

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 27/105 (25%), Positives = 37/105 (35%), Gaps = 8/105 (7%)
 Frame = +1

Query: 19  QPAPRRTDGPVREKAREAGRPP------AQAF-VAXXXXXXXXXXXXXXXXXPVQQARAF 177
           +P PR   GP+R  A + GR        AQ F V                  P+ ++R  
Sbjct: 109 RPQPRGRGGPLRAPASQVGREETQEPQGAQRFRVRDPIKPGMFGYGRVPFALPLHRSRRH 168

Query: 178 PQRPGNSLRPGAHHSLDRACSEPRACAQGLRRDG-HQVSPESRGH 309
           P RPG          +    S+P +      + G H   PE R H
Sbjct: 169 PHRPGQPKNSSTGEGM--VPSQPPSTELASEKHGPHMQPPEPRSH 211



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>Q5WEM4:HAM1_BACSK HAM1 protein homolog - Bacillus clausii (strain KSM-K16)|
          Length = 198

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
 Frame = -2

Query: 313 NDDLGILEILDDHHAV-VLVRTLVAHCML---DPRSDVLLAEGSCQGAGERRELVVQEEH 146
           ND   I ++L +   V    RT    C++   +P  + + AEG+C+G           E 
Sbjct: 94  NDQANIDKVLSELDGVPTQKRTARFFCVIALAEPGKETIFAEGACEGR--------ITEK 145

Query: 145 ASKAGGEGADVVDFVPQTLERAVGQLHGLSLELGHR 38
            + + G G D + FVP   +       G   +L HR
Sbjct: 146 PTGSNGFGYDPIFFVPSHGQTMAELSAGTKNQLSHR 181


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 88,315,307
Number of extensions: 2001345
Number of successful extensions: 7284
Number of sequences better than 10.0: 19
Number of HSP's gapped: 7272
Number of HSP's successfully gapped: 19
Length of query: 169
Length of database: 100,686,439
Length adjustment: 105
Effective length of query: 64
Effective length of database: 71,885,464
Effective search space: 4600669696
Effective search space used: 4600669696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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