>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656
 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 116     atcggctccttcgccgccggct 137
               ||||||||||||||||||||||
Sbjct: 2313622 atcggctccttcgccgccggct 2313643

>ref|XM_741400.1| Aspergillus fumigatus Af293 DEAD/DEAH box helicase (Afu4g03070)
            partial mRNA
          Length = 6132

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   agcgcctcgccgcaccgatgg 44
            |||||||||||||||||||||
Sbjct: 3749 agcgcctcgccgcaccgatgg 3769

>gb|AY104728.1| Zea mays PCO113156 mRNA sequence
          Length = 1312

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 59  aagcccgtgaagctggccgac 79
           |||||||||||||||||||||
Sbjct: 517 aagcccgtgaagctggccgac 537

>dbj|AB042267.1| Zea mays ZmRR5 mRNA for response regulator 5, complete cds
          Length = 1654

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 59  aagcccgtgaagctggccgac 79
           |||||||||||||||||||||
Sbjct: 786 aagcccgtgaagctggccgac 806

>dbj|AK233829.1| Sus scrofa mRNA, clone:MLN010043B06, expressed in mesenteric lymph
            node
          Length = 1314

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 149  ttcttcctgtacaacaagctcgcg 172
            ||||||||||||| ||||||||||
Sbjct: 1045 ttcttcctgtacagcaagctcgcg 1068

>dbj|AK233646.1| Sus scrofa mRNA, clone:LVRM10195C04, expressed in liver
          Length = 1628

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 149  ttcttcctgtacaacaagctcgcg 172
            ||||||||||||| ||||||||||
Sbjct: 1370 ttcttcctgtacagcaagctcgcg 1393

>dbj|AK238775.1| Sus scrofa mRNA, clone:THY010029C09, expressed in thymus
          Length = 1619

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 149  ttcttcctgtacaacaagctcgcg 172
            ||||||||||||| ||||||||||
Sbjct: 1351 ttcttcctgtacagcaagctcgcg 1374

>ref|NM_001052040.1| Oryza sativa (japonica cultivar-group) Os01g0966900 (Os01g0966900)
           mRNA, complete cds
          Length = 1455

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 tcggctccttcgccgccggc 136
           ||||||||||||||||||||
Sbjct: 62  tcggctccttcgccgccggc 81

>ref|XM_001160423.1| PREDICTED: Pan troglodytes zinc finger and BTB domain containing
           38, transcript variant 4 (ZBTB38), mRNA
          Length = 7568

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 tcggctccttcgccgccggc 136
           ||||||||||||||||||||
Sbjct: 58  tcggctccttcgccgccggc 39

>gb|CP000358.2| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574127

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   tcgcgcctttccccagcgcc 187
             ||||||||||||||||||||
Sbjct: 19165 tcgcgcctttccccagcgcc 19184

>gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome 8, complete sequence
          Length = 201483

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ggccaggagcacatcactcc 222
              ||||||||||||||||||||
Sbjct: 144146 ggccaggagcacatcactcc 144127

>gb|AC010184.18| Homo sapiens 3 BAC RP11-438D8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 190580

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    tcggctccttcgccgccggc 136
              ||||||||||||||||||||
Sbjct: 137365 tcggctccttcgccgccggc 137384

>gb|AC025289.6| Homo sapiens chromosome 16 clone RP11-533D19, complete sequence
          Length = 185047

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 230    gagcatgcagtgagccacgagcgt 253
              ||||||||||||||||| ||||||
Sbjct: 129724 gagcatgcagtgagccaagagcgt 129747

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 117      tcggctccttcgccgccggc 136
                ||||||||||||||||||||
Sbjct: 42630202 tcggctccttcgccgccggc 42630183

>gb|AC020716.3| Homo sapiens BAC clone RP11-449G13 from 16, complete sequence
          Length = 171805

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 230   gagcatgcagtgagccacgagcgt 253
             ||||||||||||||||| ||||||
Sbjct: 79098 gagcatgcagtgagccaagagcgt 79075

>emb|AL513534.17| Human DNA sequence from clone RP11-119F7 on chromosome 10 Contains a
              novel gene, a novel pseudgoene, the 3' end of the gene for
              leukemia-associated protein with a CXXC domain (LCX) a
              ribosomal protein S3A (RPS3A) pseudogene, the 5' end of a
              novel gene (FLJ10590) (FLJ10839, FLJ13376, FLJ10839) and a
              CpG island, complete sequence
          Length = 167633

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    gcagtgagccacgagcgtgc 255
              ||||||||||||||||||||
Sbjct: 158296 gcagtgagccacgagcgtgc 158277

>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0458E05
          Length = 193577

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    tcggctccttcgccgccggc 136
              ||||||||||||||||||||
Sbjct: 151085 tcggctccttcgccgccggc 151066

>gb|AC026472.8| Homo sapiens chromosome 16 clone RP11-511J24, complete sequence
          Length = 185047

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 230    gagcatgcagtgagccacgagcgt 253
              ||||||||||||||||| ||||||
Sbjct: 129724 gagcatgcagtgagccaagagcgt 129747

>gb|AC138811.3| Homo sapiens chromosome 16 clone RP11-1035H13, complete sequence
          Length = 194779

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 230    gagcatgcagtgagccacgagcgt 253
              ||||||||||||||||| ||||||
Sbjct: 173226 gagcatgcagtgagccaagagcgt 173249

>ref|NM_213828.1| Sus scrofa IgG heavy chain (LOC396781), mRNA
 gb|AF062384.1|AF062384 Sus scrofa IgG heavy chain precursor, mRNA, complete cds
          Length = 1431

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 149  ttcttcctgtacaacaagctcgcg 172
            ||||||||||||| ||||||||||
Sbjct: 1291 ttcttcctgtacagcaagctcgcg 1314

>emb|AL117209.7|CNS01DRH Human chromosome 14 DNA sequence BAC R-365N19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 159602

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 230    gagcatgcagtgagccacgagcgtgcgc 257
              |||| ||||||||||||||| |||||||
Sbjct: 138028 gagcttgcagtgagccacgatcgtgcgc 138001

>gb|U03781.1|SSU03781 Sus scrofa Ig gamma 3 constant region (IgG3) mRNA, partial cds
          Length = 1079

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 149 ttcttcctgtacaacaagctcgcg 172
           ||||||||||||| ||||||||||
Sbjct: 853 ttcttcctgtacagcaagctcgcg 876

>gb|M81770.1|PIGIGHVGB S.domesticus IgG chain mRNA, C region, 3' end
          Length = 1093

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 149 ttcttcctgtacaacaagctcgcg 172
           ||||||||||||| ||||||||||
Sbjct: 855 ttcttcctgtacagcaagctcgcg 878


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 69,658,307
Number of extensions: 3971200
Number of successful extensions: 68473
Number of sequences better than 10.0: 23
Number of HSP's gapped: 68473
Number of HSP's successfully gapped: 23
Length of query: 509
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 487
Effective length of database: 18,508,616,841
Effective search space: 9013696401567
Effective search space used: 9013696401567
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)