ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf105i02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR855179.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0152K17, complete sequence Length = 97679 Score = 172 bits (87), Expect = 5e-39 Identities = 248/301 (82%), Gaps = 3/301 (0%) Strand = Plus / Plus Query: 1617 ctccagtcaaatctgagcctttaaagccatcccaatcaggaagctttcaagtcctgactc 1676 ||||||| ||| ||||| | |||||||| | ||||||||||||||||||||||| | | Sbjct: 52739 ctccagtaaaacatgagcttgtaaagccaactcaatcaggaagctttcaagtccttagcc 52798 Query: 1677 gtgatcagaatggtgctgcaaatactgccaaagactgctccagcaatcccgtgagccctg 1736 |||| ||||||||| ||| ||||||||||||||| | | |||||||| | |||||||| Sbjct: 52799 gtgagcagaatggtactgtaaatactgccaaagaaagtactagcaatcctgcgagccctg 52858 Query: 1737 ttctaggtcaatcttcttcagtggaaccactgaaaaggtctactgtcaaccataagctta 1796 ||||||| | ||| | |||||| |||||||||| || | ||| ||| ||||| ||||| | Sbjct: 52859 ttctaggccgatcatattcagtagaaccactgagaaagcctattgtaaaccaaaagctaa 52918 Query: 1797 aaggcgttgtaaatggcctccctttgcatctacaacaaggttcatctggtgagagaaaat 1856 | || |||| ||||| |||||||| || || ||||| |||| |||||||||||||| Sbjct: 52919 agggtgttgctaatggtctccctttaca---actgcaaggatcatttggtgagagaaaat 52975 Query: 1857 caagtgcaaaagaaaagcataaattctttgagttactccggagcaagtctttaaatggtt 1916 ||||||| ||||| |||||||||||||||||||| || || ||||| || || ||||||| Sbjct: 52976 caagtgcgaaagataagcataaattctttgagttgctgcgcagcaaatcattgaatggtt 53035 Query: 1917 c 1917 | Sbjct: 53036 c 53036 Score = 170 bits (86), Expect = 2e-38 Identities = 164/190 (86%) Strand = Plus / Plus Query: 1092 tatctagaaaggatgctggtggtatctcctttgagcaagaatttccacaccttagttctg 1151 |||| ||||||| | |||||||| |||||||||||| |||||||||||||||| |||||| Sbjct: 51146 tatcaagaaaggtttctggtggtgtctcctttgagcgagaatttccacaccttggttctg 51205 Query: 1152 aggacaatgatgggaagcaagatattggtagagttccatctcctggaattagcaccccac 1211 | ||||| |||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 51206 acgacaagaatggaaagcaagatgtaggtagagttccatctcctggaattagcaccccga 51265 Query: 1212 ttcagagcataccattggttactgcacctgatggctggaactcggtgctagcagaagttc 1271 ||||||| || || |||| ||||||| |||||| ||| || |||||||||||||||| Sbjct: 51266 ttcagagtatgcctttgggcactgcacttgatgggcggagttcagtgctagcagaagttc 51325 Query: 1272 ctggacttag 1281 ||| |||||| Sbjct: 51326 ctgtacttag 51335 Score = 161 bits (81), Expect = 2e-35 Identities = 177/209 (84%) Strand = Plus / Plus Query: 748 ttcatcaagaaaccgattatcaggccgtgatcgtgaacggagctcccagcagtcctcttc 807 |||||||||||||| || |||||| ||||| |||||||||||||| || |||||| || Sbjct: 50796 ttcatcaagaaaccaatcatcaggtcgtgaccgtgaacggagctcacaacagtccatctc 50855 Query: 808 acgtagaggttctggcccaagtgtgtccagacggcatgatcgggatggctcagtgaagtc 867 ||| || |||||||| ||| || | ||||||||||| |||||||| ||| ||||| Sbjct: 50856 acggaggagttctggctcaattggacctagacggcatgaccgggatggtacagcaaagtc 50915 Query: 868 aagaggctatgccagttttggaaggagcaacagagacagagggtgtgaaaaggactctga 927 ||||||||||||||||||||||||||||||| | ||||| ||| |||| ||||||||||| Sbjct: 50916 aagaggctatgccagttttggaaggagcaaccgggacagggggggtgagaaggactctga 50975 Query: 928 tttccatgattgggagagtaggttgggtc 956 | || | ||||||||||||||||||||| Sbjct: 50976 atcccgtaattgggagagtaggttgggtc 51004 Score = 99.6 bits (50), Expect = 6e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 1996 tggaatcaagtgtattgaaactggaagtagttcatgcgaggatgcaaattcttgtgatgg 2055 |||| |||| ||||| ||| |||||||||||| || ||||| |||||||||||||| || Sbjct: 53109 tggagtcaaatgtatggaacatggaagtagttcttgtgaggaagcaaattcttgtgaggg 53168 Query: 2056 atctcagcgacacctctctgacaatgaggaaatcaagccacc 2097 |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 53169 atctcagcagcacctttctgacaatgaggaaatcaatccacc 53210 Score = 99.6 bits (50), Expect = 6e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 2280 tgttgtttgagcccattgtagcagggaaagaggaatcgtatcctacagaagatgaaccaa 2339 |||||||||| ||||||| | ||||| |||||||||| |||||| | |||| ||| | Sbjct: 53417 tgttgtttgaacccattggaacaggggaagaggaatcctatcctgctcaagacagaccta 53476 Query: 2340 gtccagaagaaatggctttccttaaatctcttggctggaaagaagacgaagttgttccgc 2399 ||||||| || ||||||||| | ||||||||||||||||| || ||| | ||||| | Sbjct: 53477 gtccagaggagatggctttcttggtttctcttggctggaaagaggatgaaatagttccac 53536 Query: 2400 ctctgaaacaggaagagattgctgattgtttaag 2433 |||||||||||||||| |||||||||||| |||| Sbjct: 53537 ctctgaaacaggaagaaattgctgattgtgtaag 53570 Score = 79.8 bits (40), Expect = 5e-11 Identities = 43/44 (97%) Strand = Plus / Plus Query: 620 ggcatggaccgaggtgagccctcgttgaagccagaatggctggt 663 |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 49821 ggcatggaccgaggtgagccctcgctgaagccagaatggctggt 49864 Score = 71.9 bits (36), Expect = 1e-08 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1503 tatcaagtttgtcagataagttaaaaattaaaggtgcaagagctggggattctaatggtc 1562 ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 52625 tatcaagttcttcagataagttaaaatccaaaggtgcaagagctggagattctaatggcc 52684 Query: 1563 ctgt 1566 |||| Sbjct: 52685 ctgt 52688 Score = 69.9 bits (35), Expect = 5e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 2435 cacaatgtgaggctgcagcagaagctcgaggaatgtaggggctaatg 2481 |||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 54337 cacaatgtgaggctgcagcagaagcttgaggagtgtaggggttaatg 54383 Score = 60.0 bits (30), Expect = 5e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1354 ctgcgggacggcattaagcatggctgaaactgtaatgcaagcaccattaaaagtttccac 1413 ||||||||| |||||||| ||||||||||| || |||||||| || |||||| | || || Sbjct: 51408 ctgcgggactgcattaagtatggctgaaacagtgatgcaagctccgttaaaaatctcgac 51467 Query: 1414 cacaccccag 1423 ||||||||| Sbjct: 51468 aacaccccag 51477 Score = 56.0 bits (28), Expect = 7e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 2665 ttttccatgctgaaaagtggtttgaggattttcttcttcattttcccagaaggaat 2720 |||||| |||||||||| ||||| | | |||||| | ||||||||||||||||||| Sbjct: 54571 ttttccctgctgaaaagaggttttaaggttttctccctcattttcccagaaggaat 54626
>ref|NM_001059456.1| Oryza sativa (japonica cultivar-group) Os04g0448200 (Os04g0448200) mRNA, complete cds Length = 3753 Score = 172 bits (87), Expect = 5e-39 Identities = 248/301 (82%), Gaps = 3/301 (0%) Strand = Plus / Plus Query: 1617 ctccagtcaaatctgagcctttaaagccatcccaatcaggaagctttcaagtcctgactc 1676 ||||||| ||| ||||| | |||||||| | ||||||||||||||||||||||| | | Sbjct: 1733 ctccagtaaaacatgagcttgtaaagccaactcaatcaggaagctttcaagtccttagcc 1792 Query: 1677 gtgatcagaatggtgctgcaaatactgccaaagactgctccagcaatcccgtgagccctg 1736 |||| ||||||||| ||| ||||||||||||||| | | |||||||| | |||||||| Sbjct: 1793 gtgagcagaatggtactgtaaatactgccaaagaaagtactagcaatcctgcgagccctg 1852 Query: 1737 ttctaggtcaatcttcttcagtggaaccactgaaaaggtctactgtcaaccataagctta 1796 ||||||| | ||| | |||||| |||||||||| || | ||| ||| ||||| ||||| | Sbjct: 1853 ttctaggccgatcatattcagtagaaccactgagaaagcctattgtaaaccaaaagctaa 1912 Query: 1797 aaggcgttgtaaatggcctccctttgcatctacaacaaggttcatctggtgagagaaaat 1856 | || |||| ||||| |||||||| || || ||||| |||| |||||||||||||| Sbjct: 1913 agggtgttgctaatggtctccctttaca---actgcaaggatcatttggtgagagaaaat 1969 Query: 1857 caagtgcaaaagaaaagcataaattctttgagttactccggagcaagtctttaaatggtt 1916 ||||||| ||||| |||||||||||||||||||| || || ||||| || || ||||||| Sbjct: 1970 caagtgcgaaagataagcataaattctttgagttgctgcgcagcaaatcattgaatggtt 2029 Query: 1917 c 1917 | Sbjct: 2030 c 2030 Score = 170 bits (86), Expect = 2e-38 Identities = 164/190 (86%) Strand = Plus / Plus Query: 1092 tatctagaaaggatgctggtggtatctcctttgagcaagaatttccacaccttagttctg 1151 |||| ||||||| | |||||||| |||||||||||| |||||||||||||||| |||||| Sbjct: 1199 tatcaagaaaggtttctggtggtgtctcctttgagcgagaatttccacaccttggttctg 1258 Query: 1152 aggacaatgatgggaagcaagatattggtagagttccatctcctggaattagcaccccac 1211 | ||||| |||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 1259 acgacaagaatggaaagcaagatgtaggtagagttccatctcctggaattagcaccccga 1318 Query: 1212 ttcagagcataccattggttactgcacctgatggctggaactcggtgctagcagaagttc 1271 ||||||| || || |||| ||||||| |||||| ||| || |||||||||||||||| Sbjct: 1319 ttcagagtatgcctttgggcactgcacttgatgggcggagttcagtgctagcagaagttc 1378 Query: 1272 ctggacttag 1281 ||| |||||| Sbjct: 1379 ctgtacttag 1388 Score = 161 bits (81), Expect = 2e-35 Identities = 177/209 (84%) Strand = Plus / Plus Query: 748 ttcatcaagaaaccgattatcaggccgtgatcgtgaacggagctcccagcagtcctcttc 807 |||||||||||||| || |||||| ||||| |||||||||||||| || |||||| || Sbjct: 849 ttcatcaagaaaccaatcatcaggtcgtgaccgtgaacggagctcacaacagtccatctc 908 Query: 808 acgtagaggttctggcccaagtgtgtccagacggcatgatcgggatggctcagtgaagtc 867 ||| || |||||||| ||| || | ||||||||||| |||||||| ||| ||||| Sbjct: 909 acggaggagttctggctcaattggacctagacggcatgaccgggatggtacagcaaagtc 968 Query: 868 aagaggctatgccagttttggaaggagcaacagagacagagggtgtgaaaaggactctga 927 ||||||||||||||||||||||||||||||| | ||||| ||| |||| ||||||||||| Sbjct: 969 aagaggctatgccagttttggaaggagcaaccgggacagggggggtgagaaggactctga 1028 Query: 928 tttccatgattgggagagtaggttgggtc 956 | || | ||||||||||||||||||||| Sbjct: 1029 atcccgtaattgggagagtaggttgggtc 1057 Score = 123 bits (62), Expect = 4e-24 Identities = 181/222 (81%), Gaps = 9/222 (4%) Strand = Plus / Plus Query: 1354 ctgcgggacggcattaagcatggctgaaactgtaatgcaagcaccattaaaagtttccac 1413 ||||||||| |||||||| ||||||||||| || |||||||| || |||||| | || || Sbjct: 1461 ctgcgggactgcattaagtatggctgaaacagtgatgcaagctccgttaaaaatctcgac 1520 Query: 1414 cacaccccagctatctattgatgctcagaagatcgaagaaaggactatgaggc------- 1466 ||||||||| |||| || ||| |||| ||||| |||||||| ||||||| || Sbjct: 1521 aacaccccagttatcgatcgatactcataagattgaagaaagaactatgaagcagtgcat 1580 Query: 1467 --taagacctctgacgccttcatcaaacaaaacatctatatcaagtttgtcagataagtt 1524 ||||||||| ||| ||||| || ||||||| ||| ||||||||| ||||||||||| Sbjct: 1581 cctaagacctcggacaccttcttcgaacaaaatttctgtatcaagttcttcagataagtt 1640 Query: 1525 aaaaattaaaggtgcaagagctggggattctaatggtcctgt 1566 |||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 1641 aaaatccaaaggtgcaagagctggagattctaatggccctgt 1682 Score = 99.6 bits (50), Expect = 6e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 1996 tggaatcaagtgtattgaaactggaagtagttcatgcgaggatgcaaattcttgtgatgg 2055 |||| |||| ||||| ||| |||||||||||| || ||||| |||||||||||||| || Sbjct: 2103 tggagtcaaatgtatggaacatggaagtagttcttgtgaggaagcaaattcttgtgaggg 2162 Query: 2056 atctcagcgacacctctctgacaatgaggaaatcaagccacc 2097 |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 2163 atctcagcagcacctttctgacaatgaggaaatcaatccacc 2204 Score = 99.6 bits (50), Expect = 6e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 2280 tgttgtttgagcccattgtagcagggaaagaggaatcgtatcctacagaagatgaaccaa 2339 |||||||||| ||||||| | ||||| |||||||||| |||||| | |||| ||| | Sbjct: 2411 tgttgtttgaacccattggaacaggggaagaggaatcctatcctgctcaagacagaccta 2470 Query: 2340 gtccagaagaaatggctttccttaaatctcttggctggaaagaagacgaagttgttccgc 2399 ||||||| || ||||||||| | ||||||||||||||||| || ||| | ||||| | Sbjct: 2471 gtccagaggagatggctttcttggtttctcttggctggaaagaggatgaaatagttccac 2530 Query: 2400 ctctgaaacaggaagagattgctgattgtttaag 2433 |||||||||||||||| |||||||||||| |||| Sbjct: 2531 ctctgaaacaggaagaaattgctgattgtgtaag 2564 Score = 79.8 bits (40), Expect = 5e-11 Identities = 43/44 (97%) Strand = Plus / Plus Query: 620 ggcatggaccgaggtgagccctcgttgaagccagaatggctggt 663 |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 724 ggcatggaccgaggtgagccctcgctgaagccagaatggctggt 767 Score = 69.9 bits (35), Expect = 5e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 2435 cacaatgtgaggctgcagcagaagctcgaggaatgtaggggctaatg 2481 |||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 3331 cacaatgtgaggctgcagcagaagcttgaggagtgtaggggttaatg 3377 Score = 56.0 bits (28), Expect = 7e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 2665 ttttccatgctgaaaagtggtttgaggattttcttcttcattttcccagaaggaat 2720 |||||| |||||||||| ||||| | | |||||| | ||||||||||||||||||| Sbjct: 3565 ttttccctgctgaaaagaggttttaaggttttctccctcattttcccagaaggaat 3620
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 172 bits (87), Expect = 5e-39 Identities = 248/301 (82%), Gaps = 3/301 (0%) Strand = Plus / Plus Query: 1617 ctccagtcaaatctgagcctttaaagccatcccaatcaggaagctttcaagtcctgactc 1676 ||||||| ||| ||||| | |||||||| | ||||||||||||||||||||||| | | Sbjct: 22319086 ctccagtaaaacatgagcttgtaaagccaactcaatcaggaagctttcaagtccttagcc 22319145 Query: 1677 gtgatcagaatggtgctgcaaatactgccaaagactgctccagcaatcccgtgagccctg 1736 |||| ||||||||| ||| ||||||||||||||| | | |||||||| | |||||||| Sbjct: 22319146 gtgagcagaatggtactgtaaatactgccaaagaaagtactagcaatcctgcgagccctg 22319205 Query: 1737 ttctaggtcaatcttcttcagtggaaccactgaaaaggtctactgtcaaccataagctta 1796 ||||||| | ||| | |||||| |||||||||| || | ||| ||| ||||| ||||| | Sbjct: 22319206 ttctaggccgatcatattcagtagaaccactgagaaagcctattgtaaaccaaaagctaa 22319265 Query: 1797 aaggcgttgtaaatggcctccctttgcatctacaacaaggttcatctggtgagagaaaat 1856 | || |||| ||||| |||||||| || || ||||| |||| |||||||||||||| Sbjct: 22319266 agggtgttgctaatggtctccctttaca---actgcaaggatcatttggtgagagaaaat 22319322 Query: 1857 caagtgcaaaagaaaagcataaattctttgagttactccggagcaagtctttaaatggtt 1916 ||||||| ||||| |||||||||||||||||||| || || ||||| || || ||||||| Sbjct: 22319323 caagtgcgaaagataagcataaattctttgagttgctgcgcagcaaatcattgaatggtt 22319382 Query: 1917 c 1917 | Sbjct: 22319383 c 22319383 Score = 170 bits (86), Expect = 2e-38 Identities = 164/190 (86%) Strand = Plus / Plus Query: 1092 tatctagaaaggatgctggtggtatctcctttgagcaagaatttccacaccttagttctg 1151 |||| ||||||| | |||||||| |||||||||||| |||||||||||||||| |||||| Sbjct: 22317493 tatcaagaaaggtttctggtggtgtctcctttgagcgagaatttccacaccttggttctg 22317552 Query: 1152 aggacaatgatgggaagcaagatattggtagagttccatctcctggaattagcaccccac 1211 | ||||| |||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 22317553 acgacaagaatggaaagcaagatgtaggtagagttccatctcctggaattagcaccccga 22317612 Query: 1212 ttcagagcataccattggttactgcacctgatggctggaactcggtgctagcagaagttc 1271 ||||||| || || |||| ||||||| |||||| ||| || |||||||||||||||| Sbjct: 22317613 ttcagagtatgcctttgggcactgcacttgatgggcggagttcagtgctagcagaagttc 22317672 Query: 1272 ctggacttag 1281 ||| |||||| Sbjct: 22317673 ctgtacttag 22317682 Score = 161 bits (81), Expect = 2e-35 Identities = 177/209 (84%) Strand = Plus / Plus Query: 748 ttcatcaagaaaccgattatcaggccgtgatcgtgaacggagctcccagcagtcctcttc 807 |||||||||||||| || |||||| ||||| |||||||||||||| || |||||| || Sbjct: 22317143 ttcatcaagaaaccaatcatcaggtcgtgaccgtgaacggagctcacaacagtccatctc 22317202 Query: 808 acgtagaggttctggcccaagtgtgtccagacggcatgatcgggatggctcagtgaagtc 867 ||| || |||||||| ||| || | ||||||||||| |||||||| ||| ||||| Sbjct: 22317203 acggaggagttctggctcaattggacctagacggcatgaccgggatggtacagcaaagtc 22317262 Query: 868 aagaggctatgccagttttggaaggagcaacagagacagagggtgtgaaaaggactctga 927 ||||||||||||||||||||||||||||||| | ||||| ||| |||| ||||||||||| Sbjct: 22317263 aagaggctatgccagttttggaaggagcaaccgggacagggggggtgagaaggactctga 22317322 Query: 928 tttccatgattgggagagtaggttgggtc 956 | || | ||||||||||||||||||||| Sbjct: 22317323 atcccgtaattgggagagtaggttgggtc 22317351 Score = 99.6 bits (50), Expect = 6e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 1996 tggaatcaagtgtattgaaactggaagtagttcatgcgaggatgcaaattcttgtgatgg 2055 |||| |||| ||||| ||| |||||||||||| || ||||| |||||||||||||| || Sbjct: 22319456 tggagtcaaatgtatggaacatggaagtagttcttgtgaggaagcaaattcttgtgaggg 22319515 Query: 2056 atctcagcgacacctctctgacaatgaggaaatcaagccacc 2097 |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 22319516 atctcagcagcacctttctgacaatgaggaaatcaatccacc 22319557 Score = 99.6 bits (50), Expect = 6e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 2280 tgttgtttgagcccattgtagcagggaaagaggaatcgtatcctacagaagatgaaccaa 2339 |||||||||| ||||||| | ||||| |||||||||| |||||| | |||| ||| | Sbjct: 22319764 tgttgtttgaacccattggaacaggggaagaggaatcctatcctgctcaagacagaccta 22319823 Query: 2340 gtccagaagaaatggctttccttaaatctcttggctggaaagaagacgaagttgttccgc 2399 ||||||| || ||||||||| | ||||||||||||||||| || ||| | ||||| | Sbjct: 22319824 gtccagaggagatggctttcttggtttctcttggctggaaagaggatgaaatagttccac 22319883 Query: 2400 ctctgaaacaggaagagattgctgattgtttaag 2433 |||||||||||||||| |||||||||||| |||| Sbjct: 22319884 ctctgaaacaggaagaaattgctgattgtgtaag 22319917 Score = 79.8 bits (40), Expect = 5e-11 Identities = 43/44 (97%) Strand = Plus / Plus Query: 620 ggcatggaccgaggtgagccctcgttgaagccagaatggctggt 663 |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 22316168 ggcatggaccgaggtgagccctcgctgaagccagaatggctggt 22316211 Score = 71.9 bits (36), Expect = 1e-08 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1503 tatcaagtttgtcagataagttaaaaattaaaggtgcaagagctggggattctaatggtc 1562 ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 22318972 tatcaagttcttcagataagttaaaatccaaaggtgcaagagctggagattctaatggcc 22319031 Query: 1563 ctgt 1566 |||| Sbjct: 22319032 ctgt 22319035 Score = 69.9 bits (35), Expect = 5e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 2435 cacaatgtgaggctgcagcagaagctcgaggaatgtaggggctaatg 2481 |||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 22320684 cacaatgtgaggctgcagcagaagcttgaggagtgtaggggttaatg 22320730 Score = 60.0 bits (30), Expect = 5e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1354 ctgcgggacggcattaagcatggctgaaactgtaatgcaagcaccattaaaagtttccac 1413 ||||||||| |||||||| ||||||||||| || |||||||| || |||||| | || || Sbjct: 22317755 ctgcgggactgcattaagtatggctgaaacagtgatgcaagctccgttaaaaatctcgac 22317814 Query: 1414 cacaccccag 1423 ||||||||| Sbjct: 22317815 aacaccccag 22317824 Score = 56.0 bits (28), Expect = 7e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 2665 ttttccatgctgaaaagtggtttgaggattttcttcttcattttcccagaaggaat 2720 |||||| |||||||||| ||||| | | |||||| | ||||||||||||||||||| Sbjct: 22320918 ttttccctgctgaaaagaggttttaaggttttctccctcattttcccagaaggaat 22320973
>dbj|AK068842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162C23, full insert sequence Length = 3754 Score = 172 bits (87), Expect = 5e-39 Identities = 248/301 (82%), Gaps = 3/301 (0%) Strand = Plus / Plus Query: 1617 ctccagtcaaatctgagcctttaaagccatcccaatcaggaagctttcaagtcctgactc 1676 ||||||| ||| ||||| | |||||||| | ||||||||||||||||||||||| | | Sbjct: 1734 ctccagtaaaacatgagcttgtaaagccaactcaatcaggaagctttcaagtccttagcc 1793 Query: 1677 gtgatcagaatggtgctgcaaatactgccaaagactgctccagcaatcccgtgagccctg 1736 |||| ||||||||| ||| ||||||||||||||| | | |||||||| | |||||||| Sbjct: 1794 gtgagcagaatggtactgtaaatactgccaaagaaagtactagcaatcctgcgagccctg 1853 Query: 1737 ttctaggtcaatcttcttcagtggaaccactgaaaaggtctactgtcaaccataagctta 1796 ||||||| | ||| | |||||| |||||||||| || | ||| ||| ||||| ||||| | Sbjct: 1854 ttctaggccgatcatattcagtagaaccactgagaaagcctattgtaaaccaaaagctaa 1913 Query: 1797 aaggcgttgtaaatggcctccctttgcatctacaacaaggttcatctggtgagagaaaat 1856 | || |||| ||||| |||||||| || || ||||| |||| |||||||||||||| Sbjct: 1914 agggtgttgctaatggtctccctttaca---actgcaaggatcatttggtgagagaaaat 1970 Query: 1857 caagtgcaaaagaaaagcataaattctttgagttactccggagcaagtctttaaatggtt 1916 ||||||| ||||| |||||||||||||||||||| || || ||||| || || ||||||| Sbjct: 1971 caagtgcgaaagataagcataaattctttgagttgctgcgcagcaaatcattgaatggtt 2030 Query: 1917 c 1917 | Sbjct: 2031 c 2031 Score = 170 bits (86), Expect = 2e-38 Identities = 164/190 (86%) Strand = Plus / Plus Query: 1092 tatctagaaaggatgctggtggtatctcctttgagcaagaatttccacaccttagttctg 1151 |||| ||||||| | |||||||| |||||||||||| |||||||||||||||| |||||| Sbjct: 1200 tatcaagaaaggtttctggtggtgtctcctttgagcgagaatttccacaccttggttctg 1259 Query: 1152 aggacaatgatgggaagcaagatattggtagagttccatctcctggaattagcaccccac 1211 | ||||| |||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 1260 acgacaagaatggaaagcaagatgtaggtagagttccatctcctggaattagcaccccga 1319 Query: 1212 ttcagagcataccattggttactgcacctgatggctggaactcggtgctagcagaagttc 1271 ||||||| || || |||| ||||||| |||||| ||| || |||||||||||||||| Sbjct: 1320 ttcagagtatgcctttgggcactgcacttgatgggcggagttcagtgctagcagaagttc 1379 Query: 1272 ctggacttag 1281 ||| |||||| Sbjct: 1380 ctgtacttag 1389 Score = 161 bits (81), Expect = 2e-35 Identities = 177/209 (84%) Strand = Plus / Plus Query: 748 ttcatcaagaaaccgattatcaggccgtgatcgtgaacggagctcccagcagtcctcttc 807 |||||||||||||| || |||||| ||||| |||||||||||||| || |||||| || Sbjct: 850 ttcatcaagaaaccaatcatcaggtcgtgaccgtgaacggagctcacaacagtccatctc 909 Query: 808 acgtagaggttctggcccaagtgtgtccagacggcatgatcgggatggctcagtgaagtc 867 ||| || |||||||| ||| || | ||||||||||| |||||||| ||| ||||| Sbjct: 910 acggaggagttctggctcaattggacctagacggcatgaccgggatggtacagcaaagtc 969 Query: 868 aagaggctatgccagttttggaaggagcaacagagacagagggtgtgaaaaggactctga 927 ||||||||||||||||||||||||||||||| | ||||| ||| |||| ||||||||||| Sbjct: 970 aagaggctatgccagttttggaaggagcaaccgggacagggggggtgagaaggactctga 1029 Query: 928 tttccatgattgggagagtaggttgggtc 956 | || | ||||||||||||||||||||| Sbjct: 1030 atcccgtaattgggagagtaggttgggtc 1058 Score = 123 bits (62), Expect = 4e-24 Identities = 181/222 (81%), Gaps = 9/222 (4%) Strand = Plus / Plus Query: 1354 ctgcgggacggcattaagcatggctgaaactgtaatgcaagcaccattaaaagtttccac 1413 ||||||||| |||||||| ||||||||||| || |||||||| || |||||| | || || Sbjct: 1462 ctgcgggactgcattaagtatggctgaaacagtgatgcaagctccgttaaaaatctcgac 1521 Query: 1414 cacaccccagctatctattgatgctcagaagatcgaagaaaggactatgaggc------- 1466 ||||||||| |||| || ||| |||| ||||| |||||||| ||||||| || Sbjct: 1522 aacaccccagttatcgatcgatactcataagattgaagaaagaactatgaagcagtgcat 1581 Query: 1467 --taagacctctgacgccttcatcaaacaaaacatctatatcaagtttgtcagataagtt 1524 ||||||||| ||| ||||| || ||||||| ||| ||||||||| ||||||||||| Sbjct: 1582 cctaagacctcggacaccttcttcgaacaaaatttctgtatcaagttcttcagataagtt 1641 Query: 1525 aaaaattaaaggtgcaagagctggggattctaatggtcctgt 1566 |||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 1642 aaaatccaaaggtgcaagagctggagattctaatggccctgt 1683 Score = 99.6 bits (50), Expect = 6e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 1996 tggaatcaagtgtattgaaactggaagtagttcatgcgaggatgcaaattcttgtgatgg 2055 |||| |||| ||||| ||| |||||||||||| || ||||| |||||||||||||| || Sbjct: 2104 tggagtcaaatgtatggaacatggaagtagttcttgtgaggaagcaaattcttgtgaggg 2163 Query: 2056 atctcagcgacacctctctgacaatgaggaaatcaagccacc 2097 |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 2164 atctcagcagcacctttctgacaatgaggaaatcaatccacc 2205 Score = 99.6 bits (50), Expect = 6e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 2280 tgttgtttgagcccattgtagcagggaaagaggaatcgtatcctacagaagatgaaccaa 2339 |||||||||| ||||||| | ||||| |||||||||| |||||| | |||| ||| | Sbjct: 2412 tgttgtttgaacccattggaacaggggaagaggaatcctatcctgctcaagacagaccta 2471 Query: 2340 gtccagaagaaatggctttccttaaatctcttggctggaaagaagacgaagttgttccgc 2399 ||||||| || ||||||||| | ||||||||||||||||| || ||| | ||||| | Sbjct: 2472 gtccagaggagatggctttcttggtttctcttggctggaaagaggatgaaatagttccac 2531 Query: 2400 ctctgaaacaggaagagattgctgattgtttaag 2433 |||||||||||||||| |||||||||||| |||| Sbjct: 2532 ctctgaaacaggaagaaattgctgattgtgtaag 2565 Score = 79.8 bits (40), Expect = 5e-11 Identities = 43/44 (97%) Strand = Plus / Plus Query: 620 ggcatggaccgaggtgagccctcgttgaagccagaatggctggt 663 |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 725 ggcatggaccgaggtgagccctcgctgaagccagaatggctggt 768 Score = 69.9 bits (35), Expect = 5e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 2435 cacaatgtgaggctgcagcagaagctcgaggaatgtaggggctaatg 2481 |||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 3332 cacaatgtgaggctgcagcagaagcttgaggagtgtaggggttaatg 3378 Score = 56.0 bits (28), Expect = 7e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 2665 ttttccatgctgaaaagtggtttgaggattttcttcttcattttcccagaaggaat 2720 |||||| |||||||||| ||||| | | |||||| | ||||||||||||||||||| Sbjct: 3566 ttttccctgctgaaaagaggttttaaggttttctccctcattttcccagaaggaat 3621
>dbj|AK060713.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C12, full insert sequence Length = 1344 Score = 172 bits (87), Expect = 5e-39 Identities = 248/301 (82%), Gaps = 3/301 (0%) Strand = Plus / Plus Query: 1617 ctccagtcaaatctgagcctttaaagccatcccaatcaggaagctttcaagtcctgactc 1676 ||||||| ||| ||||| | |||||||| | ||||||||||||||||||||||| | | Sbjct: 83 ctccagtaaaacatgagcttgtaaagccaactcaatcaggaagctttcaagtccttagcc 142 Query: 1677 gtgatcagaatggtgctgcaaatactgccaaagactgctccagcaatcccgtgagccctg 1736 |||| ||||||||| ||| ||||||||||||||| | | |||||||| | |||||||| Sbjct: 143 gtgagcagaatggtactgtaaatactgccaaagaaagtactagcaatcctgcgagccctg 202 Query: 1737 ttctaggtcaatcttcttcagtggaaccactgaaaaggtctactgtcaaccataagctta 1796 ||||||| | ||| | |||||| |||||||||| || | ||| ||| ||||| ||||| | Sbjct: 203 ttctaggccgatcatattcagtagaaccactgagaaagcctattgtaaaccaaaagctaa 262 Query: 1797 aaggcgttgtaaatggcctccctttgcatctacaacaaggttcatctggtgagagaaaat 1856 | || |||| ||||| |||||||| || || ||||| |||| |||||||||||||| Sbjct: 263 agggtgttgctaatggtctccctttaca---actgcaaggatcatttggtgagagaaaat 319 Query: 1857 caagtgcaaaagaaaagcataaattctttgagttactccggagcaagtctttaaatggtt 1916 ||||||| ||||| |||||||||||||||||||| || || ||||| || || ||||||| Sbjct: 320 caagtgcgaaagataagcataaattctttgagttgctgcgcagcaaatcattgaatggtt 379 Query: 1917 c 1917 | Sbjct: 380 c 380 Score = 163 bits (82), Expect = 4e-36 Identities = 172/202 (85%) Strand = Plus / Plus Query: 2280 tgttgtttgagcccattgtagcagggaaagaggaatcgtatcctacagaagatgaaccaa 2339 |||||||||| ||||||| | ||||| |||||||||| |||||| | |||| ||| | Sbjct: 761 tgttgtttgaacccattggaacaggggaagaggaatcctatcctgctcaagacagaccta 820 Query: 2340 gtccagaagaaatggctttccttaaatctcttggctggaaagaagacgaagttgttccgc 2399 ||||||| || ||||||||| | ||||||||||||||||| || ||| | ||||| | Sbjct: 821 gtccagaggagatggctttcttggtttctcttggctggaaagaggatgaaatagttccac 880 Query: 2400 ctctgaaacaggaagagattgctgattgtttaaggcacaatgtgaggctgcagcagaagc 2459 |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 881 ctctgaaacaggaagaaattgctgattgtttacgtcacaatgtgaggctgcagcagaagc 940 Query: 2460 tcgaggaatgtaggggctaatg 2481 | ||||| |||||||| ||||| Sbjct: 941 ttgaggagtgtaggggttaatg 962 Score = 99.6 bits (50), Expect = 6e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 1996 tggaatcaagtgtattgaaactggaagtagttcatgcgaggatgcaaattcttgtgatgg 2055 |||| |||| ||||| ||| |||||||||||| || ||||| |||||||||||||| || Sbjct: 453 tggagtcaaatgtatggaacatggaagtagttcttgtgaggaagcaaattcttgtgaggg 512 Query: 2056 atctcagcgacacctctctgacaatgaggaaatcaagccacc 2097 |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 513 atctcagcagcacctttctgacaatgaggaaatcaatccacc 554 Score = 56.0 bits (28), Expect = 7e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 2665 ttttccatgctgaaaagtggtttgaggattttcttcttcattttcccagaaggaat 2720 |||||| |||||||||| ||||| | | |||||| | ||||||||||||||||||| Sbjct: 1150 ttttccctgctgaaaagaggttttaaggttttctccctcattttcccagaaggaat 1205 Score = 48.1 bits (24), Expect = 0.18 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1535 ggtgcaagagctggggattctaatggtcctgt 1566 |||||||||||||| ||||||||||| ||||| Sbjct: 1 ggtgcaagagctggagattctaatggccctgt 32
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 172 bits (87), Expect = 5e-39 Identities = 248/301 (82%), Gaps = 3/301 (0%) Strand = Plus / Plus Query: 1617 ctccagtcaaatctgagcctttaaagccatcccaatcaggaagctttcaagtcctgactc 1676 ||||||| ||| ||||| | |||||||| | ||||||||||||||||||||||| | | Sbjct: 69990 ctccagtaaaacatgagcttgtaaagccaactcaatcaggaagctttcaagtccttagcc 70049 Query: 1677 gtgatcagaatggtgctgcaaatactgccaaagactgctccagcaatcccgtgagccctg 1736 |||| ||||||||| ||| ||||||||||||||| | | |||||||| | |||||||| Sbjct: 70050 gtgagcagaatggtactgtaaatactgccaaagaaagtactagcaatcctgcgagccctg 70109 Query: 1737 ttctaggtcaatcttcttcagtggaaccactgaaaaggtctactgtcaaccataagctta 1796 ||||||| | ||| | |||||| |||||||||| || | ||| ||| ||||| ||||| | Sbjct: 70110 ttctaggccgatcatattcagtagaaccactgagaaagcctattgtaaaccaaaagctaa 70169 Query: 1797 aaggcgttgtaaatggcctccctttgcatctacaacaaggttcatctggtgagagaaaat 1856 | || |||| ||||| |||||||| || || ||||| |||| |||||||||||||| Sbjct: 70170 agggtgttgctaatggtctccctttaca---actgcaaggatcatttggtgagagaaaat 70226 Query: 1857 caagtgcaaaagaaaagcataaattctttgagttactccggagcaagtctttaaatggtt 1916 ||||||| ||||| |||||||||||||||||||| || || ||||| || || ||||||| Sbjct: 70227 caagtgcgaaagataagcataaattctttgagttgctgcgcagcaaatcattgaatggtt 70286 Query: 1917 c 1917 | Sbjct: 70287 c 70287 Score = 170 bits (86), Expect = 2e-38 Identities = 164/190 (86%) Strand = Plus / Plus Query: 1092 tatctagaaaggatgctggtggtatctcctttgagcaagaatttccacaccttagttctg 1151 |||| ||||||| | |||||||| |||||||||||| |||||||||||||||| |||||| Sbjct: 68397 tatcaagaaaggtttctggtggtgtctcctttgagcgagaatttccacaccttggttctg 68456 Query: 1152 aggacaatgatgggaagcaagatattggtagagttccatctcctggaattagcaccccac 1211 | ||||| |||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 68457 acgacaagaatggaaagcaagatgtaggtagagttccatctcctggaattagcaccccga 68516 Query: 1212 ttcagagcataccattggttactgcacctgatggctggaactcggtgctagcagaagttc 1271 ||||||| || || |||| ||||||| |||||| ||| || |||||||||||||||| Sbjct: 68517 ttcagagtatgcctttgggcactgcacttgatgggcggagttcagtgctagcagaagttc 68576 Query: 1272 ctggacttag 1281 ||| |||||| Sbjct: 68577 ctgtacttag 68586 Score = 161 bits (81), Expect = 2e-35 Identities = 177/209 (84%) Strand = Plus / Plus Query: 748 ttcatcaagaaaccgattatcaggccgtgatcgtgaacggagctcccagcagtcctcttc 807 |||||||||||||| || |||||| ||||| |||||||||||||| || |||||| || Sbjct: 68047 ttcatcaagaaaccaatcatcaggtcgtgaccgtgaacggagctcacaacagtccatctc 68106 Query: 808 acgtagaggttctggcccaagtgtgtccagacggcatgatcgggatggctcagtgaagtc 867 ||| || |||||||| ||| || | ||||||||||| |||||||| ||| ||||| Sbjct: 68107 acggaggagttctggctcaattggacctagacggcatgaccgggatggtacagcaaagtc 68166 Query: 868 aagaggctatgccagttttggaaggagcaacagagacagagggtgtgaaaaggactctga 927 ||||||||||||||||||||||||||||||| | ||||| ||| |||| ||||||||||| Sbjct: 68167 aagaggctatgccagttttggaaggagcaaccgggacagggggggtgagaaggactctga 68226 Query: 928 tttccatgattgggagagtaggttgggtc 956 | || | ||||||||||||||||||||| Sbjct: 68227 atcccgtaattgggagagtaggttgggtc 68255 Score = 99.6 bits (50), Expect = 6e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 1996 tggaatcaagtgtattgaaactggaagtagttcatgcgaggatgcaaattcttgtgatgg 2055 |||| |||| ||||| ||| |||||||||||| || ||||| |||||||||||||| || Sbjct: 70360 tggagtcaaatgtatggaacatggaagtagttcttgtgaggaagcaaattcttgtgaggg 70419 Query: 2056 atctcagcgacacctctctgacaatgaggaaatcaagccacc 2097 |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 70420 atctcagcagcacctttctgacaatgaggaaatcaatccacc 70461 Score = 99.6 bits (50), Expect = 6e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 2280 tgttgtttgagcccattgtagcagggaaagaggaatcgtatcctacagaagatgaaccaa 2339 |||||||||| ||||||| | ||||| |||||||||| |||||| | |||| ||| | Sbjct: 70668 tgttgtttgaacccattggaacaggggaagaggaatcctatcctgctcaagacagaccta 70727 Query: 2340 gtccagaagaaatggctttccttaaatctcttggctggaaagaagacgaagttgttccgc 2399 ||||||| || ||||||||| | ||||||||||||||||| || ||| | ||||| | Sbjct: 70728 gtccagaggagatggctttcttggtttctcttggctggaaagaggatgaaatagttccac 70787 Query: 2400 ctctgaaacaggaagagattgctgattgtttaag 2433 |||||||||||||||| |||||||||||| |||| Sbjct: 70788 ctctgaaacaggaagaaattgctgattgtgtaag 70821 Score = 79.8 bits (40), Expect = 5e-11 Identities = 43/44 (97%) Strand = Plus / Plus Query: 620 ggcatggaccgaggtgagccctcgttgaagccagaatggctggt 663 |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 67072 ggcatggaccgaggtgagccctcgctgaagccagaatggctggt 67115 Score = 71.9 bits (36), Expect = 1e-08 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1503 tatcaagtttgtcagataagttaaaaattaaaggtgcaagagctggggattctaatggtc 1562 ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 69876 tatcaagttcttcagataagttaaaatccaaaggtgcaagagctggagattctaatggcc 69935 Query: 1563 ctgt 1566 |||| Sbjct: 69936 ctgt 69939 Score = 69.9 bits (35), Expect = 5e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 2435 cacaatgtgaggctgcagcagaagctcgaggaatgtaggggctaatg 2481 |||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 71588 cacaatgtgaggctgcagcagaagcttgaggagtgtaggggttaatg 71634 Score = 60.0 bits (30), Expect = 5e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1354 ctgcgggacggcattaagcatggctgaaactgtaatgcaagcaccattaaaagtttccac 1413 ||||||||| |||||||| ||||||||||| || |||||||| || |||||| | || || Sbjct: 68659 ctgcgggactgcattaagtatggctgaaacagtgatgcaagctccgttaaaaatctcgac 68718 Query: 1414 cacaccccag 1423 ||||||||| Sbjct: 68719 aacaccccag 68728 Score = 56.0 bits (28), Expect = 7e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 2665 ttttccatgctgaaaagtggtttgaggattttcttcttcattttcccagaaggaat 2720 |||||| |||||||||| ||||| | | |||||| | ||||||||||||||||||| Sbjct: 71822 ttttccctgctgaaaagaggttttaaggttttctccctcattttcccagaaggaat 71877
>emb|BX640465.7| Zebrafish DNA sequence from clone CH211-198B21 in linkage group 9, complete sequence Length = 214459 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1491 acaaaacatctatatcaagtttg 1513 ||||||||||||||||||||||| Sbjct: 38109 acaaaacatctatatcaagtttg 38087
>emb|AL731564.5| Zebrafish DNA sequence from clone XX-143E18 in linkage group 9, complete sequence Length = 38601 Score = 46.1 bits (23), Expect = 0.71 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1491 acaaaacatctatatcaagtttg 1513 ||||||||||||||||||||||| Sbjct: 27166 acaaaacatctatatcaagtttg 27188
>gb|AC161218.10| Mus musculus chromosome 7, clone RP24-161J8, complete sequence Length = 181156 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2280 tgttgtttgagcccattgtagc 2301 |||||||||||||||||||||| Sbjct: 78775 tgttgtttgagcccattgtagc 78796
>emb|Z69721.1|HSU201H11 Human DNA sequence from clone LL0XNC01-201H11 on chromosome X Contains part of the IL1RAPL2 gene for interleukin 1 receptor accessory protein-like 2, complete sequence Length = 32886 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2694 tttcttcttcattttcccagaa 2715 |||||||||||||||||||||| Sbjct: 21203 tttcttcttcattttcccagaa 21224
>emb|AL590705.9| Human DNA sequence from clone RP11-498P14 on chromosome 9 Contains four novel genes, a novel gene similar to FLJ23393. the 5' end of a novel gene (KIAA1529) and two CpG islands, complete sequence Length = 130244 Score = 44.1 bits (22), Expect = 2.8 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1514 tcagataagttaaaaattaaaggtgcaaga 1543 |||||| |||| |||||||||||||||||| Sbjct: 109958 tcagatgagttgaaaattaaaggtgcaaga 109987
>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence Length = 190982 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2687 tgaggattttcttcttcatttt 2708 |||||||||||||||||||||| Sbjct: 176748 tgaggattttcttcttcatttt 176727
>emb|AL772205.12| Mouse DNA sequence from clone RP23-162C3 on chromosome 2, complete sequence Length = 142565 Score = 44.1 bits (22), Expect = 2.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2773 taggatgttttcttttttatacttct 2798 |||||| ||||||||||||||||||| Sbjct: 132148 taggatcttttcttttttatacttct 132173
>emb|AL603664.16| Mouse DNA sequence from clone RP23-247J12 on chromosome 11, complete sequence Length = 158098 Score = 44.1 bits (22), Expect = 2.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 cacaccacacaaacccacacac 26 |||||||||||||||||||||| Sbjct: 55648 cacaccacacaaacccacacac 55669 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 533,521,056 Number of extensions: 29177736 Number of successful extensions: 149569 Number of sequences better than 10.0: 14 Number of HSP's gapped: 149558 Number of HSP's successfully gapped: 63 Length of query: 2908 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2885 Effective length of database: 18,503,978,556 Effective search space: 53383978134060 Effective search space used: 53383978134060 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
