ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf102i21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q976C3:Y258_SULTO Uncharacterized acetyltransferase ST0258 - Sul... 33 3.1
2O83595:SYL_TREPA Leucyl-tRNA synthetase - Treponema pallidum 32 5.3
3Q6P8J2:SAT2_MOUSE Diamine acetyltransferase 2 - Mus musculus (Mo... 32 5.3
4P36135:UTH1_YEAST Protein UTH1 - Saccharomyces cerevisiae (Baker... 32 6.9

>Q976C3:Y258_SULTO Uncharacterized acetyltransferase ST0258 - Sulfolobus tokodaii|
          Length = 167
 Score = 32.7 bits (73), Expect = 3.1
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = +3

Query: 636 KIIGVVDCTVQDEGDILRNLQGVQEYFYVSGIAVLPSFRRRKVGTALLKA-CEVLALEWR 812
           +++G +   ++     L+ L  + +  +V  IAVL  +RR  +GTALL+A  + +   + 
Sbjct: 61  EVVGYIMPRIEWGFSNLKQLPTLVKKGHVVSIAVLEQYRRLGIGTALLQASMKAMKEVYN 120

Query: 813 QRFMALMAYEDDSSARGLYAKAGYRVV 893
              + L     +S A  LY K G++ V
Sbjct: 121 AEEVYLEVRVSNSPAINLYKKLGFKEV 147



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>O83595:SYL_TREPA Leucyl-tRNA synthetase - Treponema pallidum|
          Length = 878

 Score = 32.0 bits (71), Expect = 5.3
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
 Frame = -2

Query: 826 AMNLCLHSRANTS---HAFSRAVPTFLLLNDG----STAIPDT*KYSWTPWRFLRMSPSS 668
           A+    H R +TS     F R + +F    D     STA P+   Y WT W FL++    
Sbjct: 92  ALKTGTHPRVSTSANCDTFRRQIQSFGFSYDWEREISTADPEY--YRWTQWLFLKLYEKG 149

Query: 667 CTVQSTTPMIFSNGARDCNSSSASSATKHA 578
              ++T P+   N    C +  A+   + A
Sbjct: 150 LAYEATAPI---NWCPSCKTGLANEEVRDA 176



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>Q6P8J2:SAT2_MOUSE Diamine acetyltransferase 2 - Mus musculus (Mouse)|
          Length = 170

 Score = 32.0 bits (71), Expect = 5.3
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +3

Query: 717 YVSGIAVLPSFRRRKVGTALLKACEVLALEWRQRFMALMAYEDDSSARGLYAKAGYRVVS 896
           Y+  I V+P +R + +GT ++K    +AL        L   + +  A  LY   G + ++
Sbjct: 90  YLEDIYVMPQYRGQGIGTKIIKKVAEVALNKGCSQFRLAVLDWNKKAVNLYKFLGAQDLT 149

Query: 897 RDPGWVTW 920
              GW+++
Sbjct: 150 ESEGWLSF 157



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>P36135:UTH1_YEAST Protein UTH1 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 450

 Score = 31.6 bits (70), Expect = 6.9
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
 Frame = -2

Query: 952 FTMRTRLLLPTQVTHPGSLDTTLYPAFA*SPRALLSSSYAIRAMNLCLHSRANTSHAFSR 773
           F     L+LP     P SL+ +   +   S    LS+S A+ A     HS  N  H   R
Sbjct: 61  FEYNQLLVLPLNKNLP-SLNFSRNSSMKLSALLALSASTAVLAAPAVHHSD-NHHHNDKR 118

Query: 772 AVPTFL--LLNDGSTAIP--DT*KYSWTPWRFLRMSPSSCTVQSTTPMIFSNGARDCNSS 605
           AV T    +  DG+  IP   T   +    +   ++ ++ T+ ST     ++ A   +SS
Sbjct: 119 AVVTVTQYVNADGAVVIPAATTATSAAADGKVESVAAATTTLSSTAAAATTSAAASSSSS 178

Query: 604 SASSATKHAYLSGGEF 557
           S+SS++  + +  G+F
Sbjct: 179 SSSSSSSSSSVGSGDF 194


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 194,284,218
Number of extensions: 4172856
Number of successful extensions: 11214
Number of sequences better than 10.0: 4
Number of HSP's gapped: 11197
Number of HSP's successfully gapped: 4
Length of query: 405
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 289
Effective length of database: 68,868,219
Effective search space: 19902915291
Effective search space used: 19902915291
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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