| Clone Name | FLbaf102i21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001065866.1| Oryza sativa (japonica cultivar-group) Os07g0264800 (Os07g0264800) mRNA, complete cds Length = 1117 Score = 230 bits (116), Expect = 9e-57 Identities = 194/220 (88%) Strand = Plus / Plus Query: 381 taccttgcgatggaggctgagtggggtgtgcggcggatggggcggatcggcgaggagatg 440 ||||| |||| ||||| |||||||| |||||||||||||||||| |||||||||||||| Sbjct: 313 tacctggcgagggagggcgagtggggggtgcggcggatggggcgggtcggcgaggagatg 372 Query: 441 aggcgggtggcgttcgtgcaggccgaggccttccacgtccccgttgcgctcttcaacgac 500 ||||||||||| |||| |||||||||||||||||| ||||||| || |||||||||||| Sbjct: 373 cggcgggtggcgctcgtccaggccgaggccttccacatccccgtcgccctcttcaacgac 432 Query: 501 ttcttcttcgatttcttcaaagcagaggtgttggcggcgctcatttacaaactgaggaat 560 |||||||||||||| |||||||| |||||| || |||||||||| |||| |||||||| Sbjct: 433 ttcttcttcgattttttcaaagcggaggtgctgtcggcgctcatctacagggtgaggaat 492 Query: 561 tcgccgcctgacaggtatgcatgcttggtagcagaagaag 600 |||||||||||||| || || || || || |||||||||| Sbjct: 493 tcgccgcctgacagatacgcgtgtttagtggcagaagaag 532 Score = 172 bits (87), Expect = 2e-39 Identities = 261/319 (81%) Strand = Plus / Plus Query: 643 ttggggtggtggattgcacggtgcaggatgaaggtgacatccttaggaacctccaaggcg 702 |||| |||||||| ||||| || ||| |||||| |||||| |||| |||||||||||||| Sbjct: 578 ttggtgtggtggactgcacagttcagaatgaagctgacatacttaagaacctccaaggcg 637 Query: 703 tccaggagtacttttacgtatcaggaatagccgtgctgccatcattcaggaggaggaagg 762 || | |||||| | || || |||||||| || ||| ||||||| |||||||||||||||| Sbjct: 638 tcgacgagtacctctatgtgtcaggaattgcggtgttgccatccttcaggaggaggaagg 697 Query: 763 taggcaccgctctgctgaaagcgtgcgaggtgttggctctagaatggaggcagagattca 822 |||| || || ||||||||||| ||||||| | |||| || | |||||||| ||||||| Sbjct: 698 tagggactgcgctgctgaaagcctgcgaggcgctggcgctccagtggaggcacagattca 757 Query: 823 tggctcttatggcatacgaggatgacagcagcgctcgaggactctatgcaaaggcaggat 882 |||| || | ||| ||| |||| ||| | |||||||| || || | ||||| || | Sbjct: 758 tggcgctgagggcttacaaggacgacgatggagctcgaggcctttactccaaggcggggt 817 Query: 883 acagggtggtgtcaagggatcctgggtgggtcacctgggttgggaggaggaggcgtgttc 942 ||||||||||| ||| ||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 818 acagggtggtggcaaaggatcctggatgggtcacctgggtgggaaggagacggcgtgttc 877 Query: 943 tcatggtaaaagagttgcc 961 | ||| |||| ||| |||| Sbjct: 878 tgatgataaaggagctgcc 896
>dbj|AK104697.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B12, full insert sequence Length = 1012 Score = 230 bits (116), Expect = 9e-57 Identities = 194/220 (88%) Strand = Plus / Plus Query: 381 taccttgcgatggaggctgagtggggtgtgcggcggatggggcggatcggcgaggagatg 440 ||||| |||| ||||| |||||||| |||||||||||||||||| |||||||||||||| Sbjct: 302 tacctggcgagggagggcgagtggggggtgcggcggatggggcgggtcggcgaggagatg 361 Query: 441 aggcgggtggcgttcgtgcaggccgaggccttccacgtccccgttgcgctcttcaacgac 500 ||||||||||| |||| |||||||||||||||||| ||||||| || |||||||||||| Sbjct: 362 cggcgggtggcgctcgtccaggccgaggccttccacatccccgtcgccctcttcaacgac 421 Query: 501 ttcttcttcgatttcttcaaagcagaggtgttggcggcgctcatttacaaactgaggaat 560 |||||||||||||| |||||||| |||||| || |||||||||| |||| |||||||| Sbjct: 422 ttcttcttcgattttttcaaagcggaggtgctgtcggcgctcatctacagggtgaggaat 481 Query: 561 tcgccgcctgacaggtatgcatgcttggtagcagaagaag 600 |||||||||||||| || || || || || |||||||||| Sbjct: 482 tcgccgcctgacagatacgcgtgtttagtggcagaagaag 521 Score = 172 bits (87), Expect = 2e-39 Identities = 261/319 (81%) Strand = Plus / Plus Query: 643 ttggggtggtggattgcacggtgcaggatgaaggtgacatccttaggaacctccaaggcg 702 |||| |||||||| ||||| || ||| |||||| |||||| |||| |||||||||||||| Sbjct: 567 ttggtgtggtggactgcacagttcagaatgaagctgacatacttaagaacctccaaggcg 626 Query: 703 tccaggagtacttttacgtatcaggaatagccgtgctgccatcattcaggaggaggaagg 762 || | |||||| | || || |||||||| || ||| ||||||| |||||||||||||||| Sbjct: 627 tcgacgagtacctctatgtgtcaggaattgcggtgttgccatccttcaggaggaggaagg 686 Query: 763 taggcaccgctctgctgaaagcgtgcgaggtgttggctctagaatggaggcagagattca 822 |||| || || ||||||||||| ||||||| | |||| || | |||||||| ||||||| Sbjct: 687 tagggactgcgctgctgaaagcctgcgaggcgctggcgctccagtggaggcacagattca 746 Query: 823 tggctcttatggcatacgaggatgacagcagcgctcgaggactctatgcaaaggcaggat 882 |||| || | ||| ||| |||| ||| | |||||||| || || | ||||| || | Sbjct: 747 tggcgctgagggcttacaaggacgacgatggagctcgaggcctttactccaaggcggggt 806 Query: 883 acagggtggtgtcaagggatcctgggtgggtcacctgggttgggaggaggaggcgtgttc 942 ||||||||||| ||| ||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 807 acagggtggtggcaaaggatcctggatgggtcacctgggtgggaaggagacggcgtgttc 866 Query: 943 tcatggtaaaagagttgcc 961 | ||| |||| ||| |||| Sbjct: 867 tgatgataaaggagctgcc 885
>dbj|AK066403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062A11, full insert sequence Length = 1118 Score = 230 bits (116), Expect = 9e-57 Identities = 194/220 (88%) Strand = Plus / Plus Query: 381 taccttgcgatggaggctgagtggggtgtgcggcggatggggcggatcggcgaggagatg 440 ||||| |||| ||||| |||||||| |||||||||||||||||| |||||||||||||| Sbjct: 314 tacctggcgagggagggcgagtggggggtgcggcggatggggcgggtcggcgaggagatg 373 Query: 441 aggcgggtggcgttcgtgcaggccgaggccttccacgtccccgttgcgctcttcaacgac 500 ||||||||||| |||| |||||||||||||||||| ||||||| || |||||||||||| Sbjct: 374 cggcgggtggcgctcgtccaggccgaggccttccacatccccgtcgccctcttcaacgac 433 Query: 501 ttcttcttcgatttcttcaaagcagaggtgttggcggcgctcatttacaaactgaggaat 560 |||||||||||||| |||||||| |||||| || |||||||||| |||| |||||||| Sbjct: 434 ttcttcttcgattttttcaaagcggaggtgctgtcggcgctcatctacagggtgaggaat 493 Query: 561 tcgccgcctgacaggtatgcatgcttggtagcagaagaag 600 |||||||||||||| || || || || || |||||||||| Sbjct: 494 tcgccgcctgacagatacgcgtgtttagtggcagaagaag 533 Score = 172 bits (87), Expect = 2e-39 Identities = 261/319 (81%) Strand = Plus / Plus Query: 643 ttggggtggtggattgcacggtgcaggatgaaggtgacatccttaggaacctccaaggcg 702 |||| |||||||| ||||| || ||| |||||| |||||| |||| |||||||||||||| Sbjct: 579 ttggtgtggtggactgcacagttcagaatgaagctgacatacttaagaacctccaaggcg 638 Query: 703 tccaggagtacttttacgtatcaggaatagccgtgctgccatcattcaggaggaggaagg 762 || | |||||| | || || |||||||| || ||| ||||||| |||||||||||||||| Sbjct: 639 tcgacgagtacctctatgtgtcaggaattgcggtgttgccatccttcaggaggaggaagg 698 Query: 763 taggcaccgctctgctgaaagcgtgcgaggtgttggctctagaatggaggcagagattca 822 |||| || || ||||||||||| ||||||| | |||| || | |||||||| ||||||| Sbjct: 699 tagggactgcgctgctgaaagcctgcgaggcgctggcgctccagtggaggcacagattca 758 Query: 823 tggctcttatggcatacgaggatgacagcagcgctcgaggactctatgcaaaggcaggat 882 |||| || | ||| ||| |||| ||| | |||||||| || || | ||||| || | Sbjct: 759 tggcgctgagggcttacaaggacgacgatggagctcgaggcctttactccaaggcggggt 818 Query: 883 acagggtggtgtcaagggatcctgggtgggtcacctgggttgggaggaggaggcgtgttc 942 ||||||||||| ||| ||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 819 acagggtggtggcaaaggatcctggatgggtcacctgggtgggaaggagacggcgtgttc 878 Query: 943 tcatggtaaaagagttgcc 961 | ||| |||| ||| |||| Sbjct: 879 tgatgataaaggagctgcc 897
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 178 bits (90), Expect = 3e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 381 taccttgcgatggaggctgagtggggtgtgcggcggatggggcggatcggcgaggagatg 440 ||||| |||| ||||| |||||||| |||||||||||||||||| |||||||||||||| Sbjct: 9427834 tacctggcgagggagggcgagtggggggtgcggcggatggggcgggtcggcgaggagatg 9427893 Query: 441 aggcgggtggcgttcgtgcaggccgaggccttccacgtccccgttgcgctcttcaacgac 500 ||||||||||| |||| |||||||||||||||||| ||||||| || |||||||||||| Sbjct: 9427894 cggcgggtggcgctcgtccaggccgaggccttccacatccccgtcgccctcttcaacgac 9427953 Query: 501 ttcttcttcgatttcttcaaag 522 |||||||||||||| ||||||| Sbjct: 9427954 ttcttcttcgattttttcaaag 9427975 Score = 107 bits (54), Expect = 9e-20 Identities = 174/214 (81%) Strand = Plus / Plus Query: 748 tcaggaggaggaaggtaggcaccgctctgctgaaagcgtgcgaggtgttggctctagaat 807 ||||||||||||||||||| || || ||||||||||| ||||||| | |||| || | | Sbjct: 9429248 tcaggaggaggaaggtagggactgcgctgctgaaagcctgcgaggcgctggcgctccagt 9429307 Query: 808 ggaggcagagattcatggctcttatggcatacgaggatgacagcagcgctcgaggactct 867 ||||||| ||||||||||| || | ||| ||| |||| ||| | |||||||| || | Sbjct: 9429308 ggaggcacagattcatggcgctgagggcttacaaggacgacgatggagctcgaggccttt 9429367 Query: 868 atgcaaaggcaggatacagggtggtgtcaagggatcctgggtgggtcacctgggttggga 927 | | ||||| || |||||||||||| ||| ||||||||| |||||||||||||| || | Sbjct: 9429368 actccaaggcggggtacagggtggtggcaaaggatcctggatgggtcacctgggtgggaa 9429427 Query: 928 ggaggaggcgtgttctcatggtaaaagagttgcc 961 |||| |||||||||| ||| |||| ||| |||| Sbjct: 9429428 ggagacggcgtgttctgatgataaaggagctgcc 9429461 Score = 75.8 bits (38), Expect = 3e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 643 ttggggtggtggattgcacggtgcaggatgaaggtgacatccttaggaacctccaaggcg 702 |||| |||||||| ||||| || ||| |||||| |||||| |||| |||||||||||||| Sbjct: 9429065 ttggtgtggtggactgcacagttcagaatgaagctgacatacttaagaacctccaaggcg 9429124 Query: 703 tccaggagtacttttacgtatcaggaatagccgtgctgccatcattcagg 752 || | |||||| | || || |||||||| || ||| ||||||| |||||| Sbjct: 9429125 tcgacgagtacctctatgtgtcaggaattgcggtgttgccatccttcagg 9429174 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 525 gaggtgttggcggcgctcatttacaaactgaggaattcgccgcctgacaggt 576 |||||| || |||||||||| |||| |||||||||||||||||||||||| Sbjct: 9428072 gaggtgctgtcggcgctcatctacagggtgaggaattcgccgcctgacaggt 9428123
>dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0004F07 Length = 135890 Score = 178 bits (90), Expect = 3e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 381 taccttgcgatggaggctgagtggggtgtgcggcggatggggcggatcggcgaggagatg 440 ||||| |||| ||||| |||||||| |||||||||||||||||| |||||||||||||| Sbjct: 98702 tacctggcgagggagggcgagtggggggtgcggcggatggggcgggtcggcgaggagatg 98761 Query: 441 aggcgggtggcgttcgtgcaggccgaggccttccacgtccccgttgcgctcttcaacgac 500 ||||||||||| |||| |||||||||||||||||| ||||||| || |||||||||||| Sbjct: 98762 cggcgggtggcgctcgtccaggccgaggccttccacatccccgtcgccctcttcaacgac 98821 Query: 501 ttcttcttcgatttcttcaaag 522 |||||||||||||| ||||||| Sbjct: 98822 ttcttcttcgattttttcaaag 98843 Score = 107 bits (54), Expect = 9e-20 Identities = 174/214 (81%) Strand = Plus / Plus Query: 748 tcaggaggaggaaggtaggcaccgctctgctgaaagcgtgcgaggtgttggctctagaat 807 ||||||||||||||||||| || || ||||||||||| ||||||| | |||| || | | Sbjct: 100116 tcaggaggaggaaggtagggactgcgctgctgaaagcctgcgaggcgctggcgctccagt 100175 Query: 808 ggaggcagagattcatggctcttatggcatacgaggatgacagcagcgctcgaggactct 867 ||||||| ||||||||||| || | ||| ||| |||| ||| | |||||||| || | Sbjct: 100176 ggaggcacagattcatggcgctgagggcttacaaggacgacgatggagctcgaggccttt 100235 Query: 868 atgcaaaggcaggatacagggtggtgtcaagggatcctgggtgggtcacctgggttggga 927 | | ||||| || |||||||||||| ||| ||||||||| |||||||||||||| || | Sbjct: 100236 actccaaggcggggtacagggtggtggcaaaggatcctggatgggtcacctgggtgggaa 100295 Query: 928 ggaggaggcgtgttctcatggtaaaagagttgcc 961 |||| |||||||||| ||| |||| ||| |||| Sbjct: 100296 ggagacggcgtgttctgatgataaaggagctgcc 100329 Score = 75.8 bits (38), Expect = 3e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 643 ttggggtggtggattgcacggtgcaggatgaaggtgacatccttaggaacctccaaggcg 702 |||| |||||||| ||||| || ||| |||||| |||||| |||| |||||||||||||| Sbjct: 99933 ttggtgtggtggactgcacagttcagaatgaagctgacatacttaagaacctccaaggcg 99992 Query: 703 tccaggagtacttttacgtatcaggaatagccgtgctgccatcattcagg 752 || | |||||| | || || |||||||| || ||| ||||||| |||||| Sbjct: 99993 tcgacgagtacctctatgtgtcaggaattgcggtgttgccatccttcagg 100042 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 525 gaggtgttggcggcgctcatttacaaactgaggaattcgccgcctgacaggt 576 |||||| || |||||||||| |||| |||||||||||||||||||||||| Sbjct: 98940 gaggtgctgtcggcgctcatctacagggtgaggaattcgccgcctgacaggt 98991
>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1100H02 Length = 128773 Score = 178 bits (90), Expect = 3e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 381 taccttgcgatggaggctgagtggggtgtgcggcggatggggcggatcggcgaggagatg 440 ||||| |||| ||||| |||||||| |||||||||||||||||| |||||||||||||| Sbjct: 9820 tacctggcgagggagggcgagtggggggtgcggcggatggggcgggtcggcgaggagatg 9879 Query: 441 aggcgggtggcgttcgtgcaggccgaggccttccacgtccccgttgcgctcttcaacgac 500 ||||||||||| |||| |||||||||||||||||| ||||||| || |||||||||||| Sbjct: 9880 cggcgggtggcgctcgtccaggccgaggccttccacatccccgtcgccctcttcaacgac 9939 Query: 501 ttcttcttcgatttcttcaaag 522 |||||||||||||| ||||||| Sbjct: 9940 ttcttcttcgattttttcaaag 9961 Score = 107 bits (54), Expect = 9e-20 Identities = 174/214 (81%) Strand = Plus / Plus Query: 748 tcaggaggaggaaggtaggcaccgctctgctgaaagcgtgcgaggtgttggctctagaat 807 ||||||||||||||||||| || || ||||||||||| ||||||| | |||| || | | Sbjct: 11234 tcaggaggaggaaggtagggactgcgctgctgaaagcctgcgaggcgctggcgctccagt 11293 Query: 808 ggaggcagagattcatggctcttatggcatacgaggatgacagcagcgctcgaggactct 867 ||||||| ||||||||||| || | ||| ||| |||| ||| | |||||||| || | Sbjct: 11294 ggaggcacagattcatggcgctgagggcttacaaggacgacgatggagctcgaggccttt 11353 Query: 868 atgcaaaggcaggatacagggtggtgtcaagggatcctgggtgggtcacctgggttggga 927 | | ||||| || |||||||||||| ||| ||||||||| |||||||||||||| || | Sbjct: 11354 actccaaggcggggtacagggtggtggcaaaggatcctggatgggtcacctgggtgggaa 11413 Query: 928 ggaggaggcgtgttctcatggtaaaagagttgcc 961 |||| |||||||||| ||| |||| ||| |||| Sbjct: 11414 ggagacggcgtgttctgatgataaaggagctgcc 11447 Score = 75.8 bits (38), Expect = 3e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 643 ttggggtggtggattgcacggtgcaggatgaaggtgacatccttaggaacctccaaggcg 702 |||| |||||||| ||||| || ||| |||||| |||||| |||| |||||||||||||| Sbjct: 11051 ttggtgtggtggactgcacagttcagaatgaagctgacatacttaagaacctccaaggcg 11110 Query: 703 tccaggagtacttttacgtatcaggaatagccgtgctgccatcattcagg 752 || | |||||| | || || |||||||| || ||| ||||||| |||||| Sbjct: 11111 tcgacgagtacctctatgtgtcaggaattgcggtgttgccatccttcagg 11160 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 525 gaggtgttggcggcgctcatttacaaactgaggaattcgccgcctgacaggt 576 |||||| || |||||||||| |||| |||||||||||||||||||||||| Sbjct: 10058 gaggtgctgtcggcgctcatctacagggtgaggaattcgccgcctgacaggt 10109
>gb|AY105481.1| Zea mays PCO144709 mRNA sequence Length = 420 Score = 155 bits (78), Expect = 4e-34 Identities = 138/158 (87%) Strand = Plus / Plus Query: 392 ggaggctgagtggggtgtgcggcggatggggcggatcggcgaggagatgaggcgggtggc 451 |||||| | |||||| ||||||||||||| ||| | || ||||||||| |||||||||| Sbjct: 260 ggaggccgggtggggcgtgcggcggatggcacgggttggggaggagatgcggcgggtggc 319 Query: 452 gttcgtgcaggccgaggccttccacgtccccgttgcgctcttcaacgacttcttcttcga 511 | || |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 320 gcaggtccaggccgaggccttccacgtccccgtcgcgctcttcaacgacttcttcttcga 379 Query: 512 tttcttcaaagcagaggtgttggcggcgctcatttaca 549 ||||||||||| |||||| || ||| |||||| |||| Sbjct: 380 cttcttcaaagccgaggtgctgtcggggctcatctaca 417
>gb|CP000410.1| Streptococcus pneumoniae D39, complete genome Length = 2046115 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 496 acgacttcttcttcgatttcttc 518 ||||||||||||||||||||||| Sbjct: 1826567 acgacttcttcttcgatttcttc 1826589
>gb|AE008548.1| Streptococcus pneumoniae R6 section 164 of 184 of the complete genome Length = 10029 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 496 acgacttcttcttcgatttcttc 518 ||||||||||||||||||||||| Sbjct: 8019 acgacttcttcttcgatttcttc 8041
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 496 acgacttcttcttcgatttcttc 518 ||||||||||||||||||||||| Sbjct: 1938112 acgacttcttcttcgatttcttc 1938134
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ggtggcgttcgtgcaggccgag 467 |||||||||||||||||||||| Sbjct: 3188751 ggtggcgttcgtgcaggccgag 3188772
>gb|AC010235.7| Homo sapiens chromosome 5 clone CTC-339D2, complete sequence Length = 228600 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 109 tgccaccaccagcagcaaccat 130 |||||||||||||||||||||| Sbjct: 132074 tgccaccaccagcagcaaccat 132095
>gb|AC008546.6|AC008546 Homo sapiens chromosome 5 clone CTC-501K1, complete sequence Length = 205954 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 109 tgccaccaccagcagcaaccat 130 |||||||||||||||||||||| Sbjct: 41237 tgccaccaccagcagcaaccat 41258
>emb|CR956630.8| Zebrafish DNA sequence from clone CH73-141B18 in linkage group 6, complete sequence Length = 119622 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 944 catggtaaaagagttgccggttcat 968 |||||||||| |||||||||||||| Sbjct: 19703 catggtaaaatagttgccggttcat 19679
>emb|CT830107.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA218A09, full insert sequence Length = 2355 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 ggtcggcgcggtaggcggtgc 367 ||||||||||||||||||||| Sbjct: 317 ggtcggcgcggtaggcggtgc 297
>ref|NM_001068436.1| Oryza sativa (japonica cultivar-group) Os08g0440100 (Os08g0440100) mRNA, complete cds Length = 859 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 ggtcggcgcggtaggcggtgc 367 ||||||||||||||||||||| Sbjct: 301 ggtcggcgcggtaggcggtgc 281
>ref|NM_001058300.1| Oryza sativa (japonica cultivar-group) Os03g0826600 (Os03g0826600) mRNA, partial cds Length = 1702 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 caagctcgctccctcctcctc 264 ||||||||||||||||||||| Sbjct: 75 caagctcgctccctcctcctc 55
>ref|NM_102189.3| Arabidopsis thaliana unknown protein (AT1G23400) mRNA, complete cds Length = 1822 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 cttcttcttcgatttcttcaa 520 ||||||||||||||||||||| Sbjct: 475 cttcttcttcgatttcttcaa 455
>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence Length = 239688 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 569 tgacaggtatgcatgcttggt 589 ||||||||||||||||||||| Sbjct: 117604 tgacaggtatgcatgcttggt 117624
>ref|XM_453208.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D03201g predicted mRNA Length = 468 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 ctcttcaacgacttcttcttc 509 ||||||||||||||||||||| Sbjct: 366 ctcttcaacgacttcttcttc 386
>ref|XM_453209.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D03212g predicted mRNA Length = 513 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 489 ctcttcaacgacttcttcttc 509 ||||||||||||||||||||| Sbjct: 297 ctcttcaacgacttcttcttc 277
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 496 acgacttcttcttcgatttcttcaa 520 |||||||||||||| |||||||||| Sbjct: 3608141 acgacttcttcttctatttcttcaa 3608117
>gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosome 17, complete sequence Length = 201842 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1019 tatatgtatgtcctctgctaa 1039 ||||||||||||||||||||| Sbjct: 150805 tatatgtatgtcctctgctaa 150785
>gb|AY114649.1| Arabidopsis thaliana unknown protein (At1g23390) mRNA, complete cds Length = 1774 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 cttcttcttcgatttcttcaa 520 ||||||||||||||||||||| Sbjct: 471 cttcttcttcgatttcttcaa 451
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1075 ttgaattattctttggataac 1095 ||||||||||||||||||||| Sbjct: 14321781 ttgaattattctttggataac 14321761
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 ggtcggcgcggtaggcggtgc 367 ||||||||||||||||||||| Sbjct: 21400552 ggtcggcgcggtaggcggtgc 21400532
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 caagctcgctccctcctcctc 264 ||||||||||||||||||||| Sbjct: 34511013 caagctcgctccctcctcctc 34510993
>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence, complete sequence Length = 117505 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 caagctcgctccctcctcctc 264 ||||||||||||||||||||| Sbjct: 105626 caagctcgctccctcctcctc 105646
>gb|AY062732.1| Arabidopsis thaliana Unknown protein (At1g23390; F28C11.3) mRNA, complete cds Length = 1794 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 cttcttcttcgatttcttcaa 520 ||||||||||||||||||||| Sbjct: 475 cttcttcttcgatttcttcaa 455
>emb|AL138689.22| Human DNA sequence from clone RP11-272L14 on chromosome 13 Contains the EFNB2 gene for ephrin-B2 (HTKL EPLG5 LERK5)and a CpG island, complete sequence Length = 103616 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 656 ttgcacggtgcaggatgaagg 676 ||||||||||||||||||||| Sbjct: 46867 ttgcacggtgcaggatgaagg 46887
>emb|BX061553.1|CNS09JNP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC42BG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 753 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 ccaccaccagcagcaaccatg 131 ||||||||||||||||||||| Sbjct: 522 ccaccaccagcagcaaccatg 502
>emb|BX061552.1|CNS09JNO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC42BG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 895 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ccaccaccagcagcaaccatg 131 ||||||||||||||||||||| Sbjct: 538 ccaccaccagcagcaaccatg 558
>emb|BX065706.1|CNS09MV2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC49CG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 916 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ccaccaccagcagcaaccatg 131 ||||||||||||||||||||| Sbjct: 539 ccaccaccagcagcaaccatg 559
>emb|BX058736.1|CNS09HHG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC39BB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 698 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 ccaccaccagcagcaaccatg 131 ||||||||||||||||||||| Sbjct: 492 ccaccaccagcagcaaccatg 472
>emb|BX058735.1|CNS09HHF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC39BB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 972 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ccaccaccagcagcaaccatg 131 ||||||||||||||||||||| Sbjct: 513 ccaccaccagcagcaaccatg 533
>emb|BX037678.1|CNS0918I Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB1AH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 692 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ccaccaccagcagcaaccatg 131 ||||||||||||||||||||| Sbjct: 152 ccaccaccagcagcaaccatg 172
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 aggtcggcgcggtaggcggtg 366 ||||||||||||||||||||| Sbjct: 851245 aggtcggcgcggtaggcggtg 851225
>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete sequence Length = 115393 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 caagctcgctccctcctcctc 264 ||||||||||||||||||||| Sbjct: 29153 caagctcgctccctcctcctc 29173
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 ctcttcaacgacttcttcttc 509 ||||||||||||||||||||| Sbjct: 269503 ctcttcaacgacttcttcttc 269523
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1075 ttgaattattctttggataac 1095 ||||||||||||||||||||| Sbjct: 69056 ttgaattattctttggataac 69036
>gb|AC084479.1|CBRG02D22 Caenorhabditis briggsae cosmid G02D22, complete sequence Length = 41896 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 493 tcaacgacttcttcttcgatttctt 517 ||||| ||||||||||||||||||| Sbjct: 39272 tcaactacttcttcttcgatttctt 39248
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 ggtcggcgcggtaggcggtgc 367 ||||||||||||||||||||| Sbjct: 4547 ggtcggcgcggtaggcggtgc 4527
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 ggtcggcgcggtaggcggtgc 367 ||||||||||||||||||||| Sbjct: 100477 ggtcggcgcggtaggcggtgc 100457
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I, complete sequence Length = 99053 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 cttcttcttcgatttcttcaa 520 ||||||||||||||||||||| Sbjct: 90626 cttcttcttcgatttcttcaa 90646
>dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A10, full insert sequence Length = 2135 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 ggtcggcgcggtaggcggtgc 367 ||||||||||||||||||||| Sbjct: 1246 ggtcggcgcggtaggcggtgc 1226
>gb|AC007945.3|AC007945 Genomic sequence for Arabidopsis thaliana BAC F28C11 from chromosome I, complete sequence Length = 80472 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 cttcttcttcgatttcttcaa 520 ||||||||||||||||||||| Sbjct: 18161 cttcttcttcgatttcttcaa 18181
>dbj|AK101187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030C17, full insert sequence Length = 2131 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 caagctcgctccctcctcctc 264 ||||||||||||||||||||| Sbjct: 102 caagctcgctccctcctcctc 82
>dbj|AK099803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098B07, full insert sequence Length = 1707 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 caagctcgctccctcctcctc 264 ||||||||||||||||||||| Sbjct: 80 caagctcgctccctcctcctc 60
>emb|BX813408.1|CNS0ADPE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZH06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1586 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 cttcttcttcgatttcttcaa 520 ||||||||||||||||||||| Sbjct: 302 cttcttcttcgatttcttcaa 282
>dbj|AK068551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155M04, full insert sequence Length = 860 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 ggtcggcgcggtaggcggtgc 367 ||||||||||||||||||||| Sbjct: 302 ggtcggcgcggtaggcggtgc 282
>dbj|AK067741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116N13, full insert sequence Length = 2158 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 caagctcgctccctcctcctc 264 ||||||||||||||||||||| Sbjct: 91 caagctcgctccctcctcctc 71
>gb|AC154471.2| Mus musculus BAC clone RP23-195D3 from chromosome 14, complete sequence Length = 192057 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 tgcttggtagcagaagaagcc 602 ||||||||||||||||||||| Sbjct: 102891 tgcttggtagcagaagaagcc 102911
>emb|AL355074.5|CNS05TC8 Human chromosome 14 DNA sequence BAC R-750I4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 183672 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 915 acctgggttgggaggaggagg 935 ||||||||||||||||||||| Sbjct: 44042 acctgggttgggaggaggagg 44062 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 192,859,294 Number of extensions: 11062854 Number of successful extensions: 219540 Number of sequences better than 10.0: 53 Number of HSP's gapped: 219540 Number of HSP's successfully gapped: 71 Length of query: 1217 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1194 Effective length of database: 18,503,978,556 Effective search space: 22093750395864 Effective search space used: 22093750395864 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)