| Clone Name | FLbaf105h20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY111150.1| Zea mays CL37663_1 mRNA sequence Length = 664 Score = 349 bits (176), Expect = 8e-93 Identities = 353/412 (85%) Strand = Plus / Minus Query: 1 atatccatggaaagtttgttaagacatatggccgcgctgcactgacagctcttgcttatg 60 |||| ||||||| |||||| |||||||||||||| | ||| || || |||||||| |||| Sbjct: 599 atattcatggaaggtttgtcaagacatatggccgggttgccctaaccgctcttgcatatg 540 Query: 61 caatgaatgacgaattctcaagggttctcagtcagcaaatggactactattcaaatgacc 120 |||||||||| |||||||||||||| | || |||||||||||||||||||||||||||| Sbjct: 539 caatgaatgatgaattctcaagggtcttgagccagcaaatggactactattcaaatgacc 480 Query: 121 ctagtgcagatcaaatcaaccgtatgagaggcgaaatcagtcaggttagaagtgttatga 180 ||||||||||| ||| ||||| |||||||| ||||||| |||||| | |||||||||| Sbjct: 479 ctagtgcagatagaataaaccgcatgagaggtgaaatcaatcaggtccgtagtgttatga 420 Query: 181 ttgataatatcgataaagtacttgaaagaggtgaccgtttagacctattggtggacaaga 240 ||||||| || ||||| || |||||||||||||| |||||||| || |||| ||||||| Sbjct: 419 ttgataacattgataaggttcttgaaagaggtgatcgtttagaactgctggttgacaaga 360 Query: 241 ctacaactatgcaaggaaatacagttcgtttcaaaagacaagctcgccgctacagaagca 300 || ||| ||||||||||||||||||||| ||||| ||||||||||| || | ||||| || Sbjct: 359 ctgcaaatatgcaaggaaatacagttcgattcaagagacaagctcggcggttcagaaaca 300 Query: 301 caacttggtggagaaatgtcaaactcacggccgcgttgatactcctcctccttgtagtag 360 | |||||||||||||||||||||||||||||| |||||||| |||||||| ||| || Sbjct: 299 ctgtttggtggagaaatgtcaaactcacggccgcattgatacttctcctcctggtaataa 240 Query: 361 tatacatcgccctcttcttcgtgtgccacggcttcaccttgccgacttgcat 412 |||| ||| || ||||||||||||| || |||||| | || |||||||| Sbjct: 239 tatatgtcgttctagtcttcgtgtgccatggtttcaccctaccaacttgcat 188
>emb|CT832965.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA017H10, full insert sequence Length = 1144 Score = 272 bits (137), Expect = 1e-69 Identities = 341/409 (83%) Strand = Plus / Plus Query: 1 atatccatggaaagtttgttaagacatatggccgcgctgcactgacagctcttgcttatg 60 |||||||||||| ||| || |||||||||||||| |||||| ||||| | |||||||||| Sbjct: 475 atatccatggaaggttcgtgaagacatatggccgtgctgcattgacatcccttgcttatg 534 Query: 61 caatgaatgacgaattctcaagggttctcagtcagcaaatggactactattcaaatgacc 120 |||||||| || ||||| ||||| | |||||||||||||| |||||||| ||||||| Sbjct: 535 gcatgaatgatgagttctcgagggtcttgagtcagcaaatggattactattcgaatgacc 594 Query: 121 ctagtgcagatcaaatcaaccgtatgagaggcgaaatcagtcaggttagaagtgttatga 180 | | ||||| ||| || |||||||| || |||||||||||||| | | |||||||| Sbjct: 595 caaacgcagacagaataaatcgtatgaggggtgaaatcagtcaggtccgtactgttatga 654 Query: 181 ttgataatatcgataaagtacttgaaagaggtgaccgtttagacctattggtggacaaga 240 |||| ||||| |||||||| |||||||||||||| ||||| ||| | ||||| ||||||| Sbjct: 655 ttgacaatattgataaagtccttgaaagaggtgatcgtttggacatgttggtcgacaaga 714 Query: 241 ctacaactatgcaaggaaatacagttcgtttcaaaagacaagctcgccgctacagaagca 300 || ||| |||||||||||||||| ||||||| ||| ||||||||||||||| ||||| | Sbjct: 715 ctgcaaatatgcaaggaaatacaattcgttttaaacgacaagctcgccgcttcagaaata 774 Query: 301 caacttggtggagaaatgtcaaactcacggccgcgttgatactcctcctccttgtagtag 360 | || |||||||||||||| ||||||||| ||||||||| |||||||| ||| || Sbjct: 775 ccacctggtggagaaatgttaaactcacgattgcgttgatattcctcctcacggtaataa 834 Query: 361 tatacatcgccctcttcttcgtgtgccacggcttcaccttgccgacttg 409 ||||| | | ||| |||| ||||||| |||||||||||||| ||||| Sbjct: 835 tatacgttgtgctcgtctttatgtgccatggcttcaccttgcctacttg 883
>ref|NM_001063481.1| Oryza sativa (japonica cultivar-group) Os06g0174400 (Os06g0174400) mRNA, complete cds Length = 1055 Score = 272 bits (137), Expect = 1e-69 Identities = 341/409 (83%) Strand = Plus / Plus Query: 1 atatccatggaaagtttgttaagacatatggccgcgctgcactgacagctcttgcttatg 60 |||||||||||| ||| || |||||||||||||| |||||| ||||| | |||||||||| Sbjct: 386 atatccatggaaggttcgtgaagacatatggccgtgctgcattgacatcccttgcttatg 445 Query: 61 caatgaatgacgaattctcaagggttctcagtcagcaaatggactactattcaaatgacc 120 |||||||| || ||||| ||||| | |||||||||||||| |||||||| ||||||| Sbjct: 446 gcatgaatgatgagttctcgagggtcttgagtcagcaaatggattactattcgaatgacc 505 Query: 121 ctagtgcagatcaaatcaaccgtatgagaggcgaaatcagtcaggttagaagtgttatga 180 | | ||||| ||| || |||||||| || |||||||||||||| | | |||||||| Sbjct: 506 caaacgcagacagaataaatcgtatgaggggtgaaatcagtcaggtccgtactgttatga 565 Query: 181 ttgataatatcgataaagtacttgaaagaggtgaccgtttagacctattggtggacaaga 240 |||| ||||| |||||||| |||||||||||||| ||||| ||| | ||||| ||||||| Sbjct: 566 ttgacaatattgataaagtccttgaaagaggtgatcgtttggacatgttggtcgacaaga 625 Query: 241 ctacaactatgcaaggaaatacagttcgtttcaaaagacaagctcgccgctacagaagca 300 || ||| |||||||||||||||| ||||||| ||| ||||||||||||||| ||||| | Sbjct: 626 ctgcaaatatgcaaggaaatacaattcgttttaaacgacaagctcgccgcttcagaaata 685 Query: 301 caacttggtggagaaatgtcaaactcacggccgcgttgatactcctcctccttgtagtag 360 | || |||||||||||||| ||||||||| ||||||||| |||||||| ||| || Sbjct: 686 ccacctggtggagaaatgttaaactcacgattgcgttgatattcctcctcacggtaataa 745 Query: 361 tatacatcgccctcttcttcgtgtgccacggcttcaccttgccgacttg 409 ||||| | | ||| |||| ||||||| |||||||||||||| ||||| Sbjct: 746 tatacgttgtgctcgtctttatgtgccatggcttcaccttgcctacttg 794
>dbj|AK065311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002O15, full insert sequence Length = 1058 Score = 272 bits (137), Expect = 1e-69 Identities = 341/409 (83%) Strand = Plus / Plus Query: 1 atatccatggaaagtttgttaagacatatggccgcgctgcactgacagctcttgcttatg 60 |||||||||||| ||| || |||||||||||||| |||||| ||||| | |||||||||| Sbjct: 389 atatccatggaaggttcgtgaagacatatggccgtgctgcattgacatcccttgcttatg 448 Query: 61 caatgaatgacgaattctcaagggttctcagtcagcaaatggactactattcaaatgacc 120 |||||||| || ||||| ||||| | |||||||||||||| |||||||| ||||||| Sbjct: 449 gcatgaatgatgagttctcgagggtcttgagtcagcaaatggattactattcgaatgacc 508 Query: 121 ctagtgcagatcaaatcaaccgtatgagaggcgaaatcagtcaggttagaagtgttatga 180 | | ||||| ||| || |||||||| || |||||||||||||| | | |||||||| Sbjct: 509 caaacgcagacagaataaatcgtatgaggggtgaaatcagtcaggtccgtactgttatga 568 Query: 181 ttgataatatcgataaagtacttgaaagaggtgaccgtttagacctattggtggacaaga 240 |||| ||||| |||||||| |||||||||||||| ||||| ||| | ||||| ||||||| Sbjct: 569 ttgacaatattgataaagtccttgaaagaggtgatcgtttggacatgttggtcgacaaga 628 Query: 241 ctacaactatgcaaggaaatacagttcgtttcaaaagacaagctcgccgctacagaagca 300 || ||| |||||||||||||||| ||||||| ||| ||||||||||||||| ||||| | Sbjct: 629 ctgcaaatatgcaaggaaatacaattcgttttaaacgacaagctcgccgcttcagaaata 688 Query: 301 caacttggtggagaaatgtcaaactcacggccgcgttgatactcctcctccttgtagtag 360 | || |||||||||||||| ||||||||| ||||||||| |||||||| ||| || Sbjct: 689 ccacctggtggagaaatgttaaactcacgattgcgttgatattcctcctcacggtaataa 748 Query: 361 tatacatcgccctcttcttcgtgtgccacggcttcaccttgccgacttg 409 ||||| | | ||| |||| ||||||| |||||||||||||| ||||| Sbjct: 749 tatacgttgtgctcgtctttatgtgccatggcttcaccttgcctacttg 797
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 161 bits (81), Expect = 4e-36 Identities = 138/157 (87%) Strand = Plus / Minus Query: 173 tgttatgattgataatatcgataaagtacttgaaagaggtgaccgtttagacctattggt 232 |||||||||||| ||||| |||||||| |||||||||||||| ||||| ||| | ||||| Sbjct: 3773923 tgttatgattgacaatattgataaagtccttgaaagaggtgatcgtttggacatgttggt 3773864 Query: 233 ggacaagactacaactatgcaaggaaatacagttcgtttcaaaagacaagctcgccgcta 292 ||||||||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||| Sbjct: 3773863 cgacaagactgcaaatatgcaaggaaatacaattcgttttaaacgacaagctcgccgctt 3773804 Query: 293 cagaagcacaacttggtggagaaatgtcaaactcacg 329 ||||| || || |||||||||||||| ||||||||| Sbjct: 3773803 cagaaataccacctggtggagaaatgttaaactcacg 3773767 Score = 115 bits (58), Expect = 2e-22 Identities = 139/166 (83%) Strand = Plus / Minus Query: 1 atatccatggaaagtttgttaagacatatggccgcgctgcactgacagctcttgcttatg 60 |||||||||||| ||| || |||||||||||||| |||||| ||||| | |||||||||| Sbjct: 3774458 atatccatggaaggttcgtgaagacatatggccgtgctgcattgacatcccttgcttatg 3774399 Query: 61 caatgaatgacgaattctcaagggttctcagtcagcaaatggactactattcaaatgacc 120 |||||||| || ||||| ||||| | |||||||||||||| |||||||| ||||||| Sbjct: 3774398 gcatgaatgatgagttctcgagggtcttgagtcagcaaatggattactattcgaatgacc 3774339 Query: 121 ctagtgcagatcaaatcaaccgtatgagaggcgaaatcagtcaggt 166 | | ||||| ||| || |||||||| || |||||||||||||| Sbjct: 3774338 caaacgcagacagaataaatcgtatgaggggtgaaatcagtcaggt 3774293 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 382 tgtgccacggcttcaccttgccgacttg 409 ||||||| |||||||||||||| ||||| Sbjct: 3772970 tgtgccatggcttcaccttgcctacttg 3772943
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 161 bits (81), Expect = 4e-36 Identities = 138/157 (87%) Strand = Plus / Minus Query: 173 tgttatgattgataatatcgataaagtacttgaaagaggtgaccgtttagacctattggt 232 |||||||||||| ||||| |||||||| |||||||||||||| ||||| ||| | ||||| Sbjct: 31877 tgttatgattgacaatattgataaagtccttgaaagaggtgatcgtttggacatgttggt 31818 Query: 233 ggacaagactacaactatgcaaggaaatacagttcgtttcaaaagacaagctcgccgcta 292 ||||||||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||| Sbjct: 31817 cgacaagactgcaaatatgcaaggaaatacaattcgttttaaacgacaagctcgccgctt 31758 Query: 293 cagaagcacaacttggtggagaaatgtcaaactcacg 329 ||||| || || |||||||||||||| ||||||||| Sbjct: 31757 cagaaataccacctggtggagaaatgttaaactcacg 31721 Score = 115 bits (58), Expect = 2e-22 Identities = 139/166 (83%) Strand = Plus / Minus Query: 1 atatccatggaaagtttgttaagacatatggccgcgctgcactgacagctcttgcttatg 60 |||||||||||| ||| || |||||||||||||| |||||| ||||| | |||||||||| Sbjct: 32412 atatccatggaaggttcgtgaagacatatggccgtgctgcattgacatcccttgcttatg 32353 Query: 61 caatgaatgacgaattctcaagggttctcagtcagcaaatggactactattcaaatgacc 120 |||||||| || ||||| ||||| | |||||||||||||| |||||||| ||||||| Sbjct: 32352 gcatgaatgatgagttctcgagggtcttgagtcagcaaatggattactattcgaatgacc 32293 Query: 121 ctagtgcagatcaaatcaaccgtatgagaggcgaaatcagtcaggt 166 | | ||||| ||| || |||||||| || |||||||||||||| Sbjct: 32292 caaacgcagacagaataaatcgtatgaggggtgaaatcagtcaggt 32247 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 382 tgtgccacggcttcaccttgccgacttg 409 ||||||| |||||||||||||| ||||| Sbjct: 30924 tgtgccatggcttcaccttgcctacttg 30897
>ref|NM_001054962.1| Oryza sativa (japonica cultivar-group) Os02g0803600 (Os02g0803600) mRNA, complete cds Length = 927 Score = 117 bits (59), Expect = 5e-23 Identities = 290/367 (79%) Strand = Plus / Plus Query: 1 atatccatggaaagtttgttaagacatatggccgcgctgcactgacagctcttgcttatg 60 ||||||| |||| |||||| ||||| ||||| || ||||| || || ||||||||||||| Sbjct: 349 atatccacggaaggtttgtcaagacgtatggtcgtgctgctctcactgctcttgcttatg 408 Query: 61 caatgaatgacgaattctcaagggttctcagtcagcaaatggactactattcaaatgacc 120 | |||||||| || ||||| |||||| | | || |||||||||||||| ||||| || | Sbjct: 409 cgatgaatgatgagttctcgagggttttgggccaacaaatggactactactcaaacgatc 468 Query: 121 ctagtgcagatcaaatcaaccgtatgagaggcgaaatcagtcaggttagaagtgttatga 180 | | |||||| ||| || |||||||| ||||| |||||| | | |||||||| Sbjct: 469 ccaacgcagatagaatatctcggatgagaggtgaaatggatcaggtccggaatgttatga 528 Query: 181 ttgataatatcgataaagtacttgaaagaggtgaccgtttagacctattggtggacaaga 240 | || || || || |||||||| || |||||||| ||| | || || ||||| ||||||| Sbjct: 529 tcgacaacattgacaaagtactcgagagaggtgatcgtctggagctgttggtcgacaaga 588 Query: 241 ctacaactatgcaaggaaatacagttcgtttcaaaagacaagctcgccgctacagaagca 300 || ||||||||||||| || || | || || ||| ||||||||||||||| ||||| || Sbjct: 589 ctgcaactatgcaagggaacacgatgcgatttaaacgacaagctcgccgcttcagaaaca 648 Query: 301 caacttggtggagaaatgtcaaactcacggccgcgttgatactcctcctccttgtagtag 360 | ||||||||||||||||| ||||| ||||| | | || || |||| |||||| || Sbjct: 649 ccgtctggtggagaaatgtcaagctcacagccgcatcggtattcatccttcttgtaataa 708 Query: 361 tatacat 367 ||||||| Sbjct: 709 tatacat 715
>dbj|AK064750.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-F06, full insert sequence Length = 927 Score = 117 bits (59), Expect = 5e-23 Identities = 290/367 (79%) Strand = Plus / Plus Query: 1 atatccatggaaagtttgttaagacatatggccgcgctgcactgacagctcttgcttatg 60 ||||||| |||| |||||| ||||| ||||| || ||||| || || ||||||||||||| Sbjct: 349 atatccacggaaggtttgtcaagacgtatggtcgtgctgctctcactgctcttgcttatg 408 Query: 61 caatgaatgacgaattctcaagggttctcagtcagcaaatggactactattcaaatgacc 120 | |||||||| || ||||| |||||| | | || |||||||||||||| ||||| || | Sbjct: 409 cgatgaatgatgagttctcgagggttttgggccaacaaatggactactactcaaacgatc 468 Query: 121 ctagtgcagatcaaatcaaccgtatgagaggcgaaatcagtcaggttagaagtgttatga 180 | | |||||| ||| || |||||||| ||||| |||||| | | |||||||| Sbjct: 469 ccaacgcagatagaatatctcggatgagaggtgaaatggatcaggtccggaatgttatga 528 Query: 181 ttgataatatcgataaagtacttgaaagaggtgaccgtttagacctattggtggacaaga 240 | || || || || |||||||| || |||||||| ||| | || || ||||| ||||||| Sbjct: 529 tcgacaacattgacaaagtactcgagagaggtgatcgtctggagctgttggtcgacaaga 588 Query: 241 ctacaactatgcaaggaaatacagttcgtttcaaaagacaagctcgccgctacagaagca 300 || ||||||||||||| || || | || || ||| ||||||||||||||| ||||| || Sbjct: 589 ctgcaactatgcaagggaacacgatgcgatttaaacgacaagctcgccgcttcagaaaca 648 Query: 301 caacttggtggagaaatgtcaaactcacggccgcgttgatactcctcctccttgtagtag 360 | ||||||||||||||||| ||||| ||||| | | || || |||| |||||| || Sbjct: 649 ccgtctggtggagaaatgtcaagctcacagccgcatcggtattcatccttcttgtaataa 708 Query: 361 tatacat 367 ||||||| Sbjct: 709 tatacat 715
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 81.8 bits (41), Expect = 3e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 173 tgttatgattgataatatcgataaagtacttgaaagaggtgaccgtttagacctattggt 232 ||||||||| || || || || |||||||| || |||||||| ||| | || || ||||| Sbjct: 34283638 tgttatgatcgacaacattgacaaagtactcgagagaggtgatcgtctggagctgttggt 34283697 Query: 233 ggacaagactacaactatgcaaggaaatacagttcgtttcaaaagacaagctcgccgcta 292 ||||||||| ||||||||||||| || || | || || ||| ||||||||||||||| Sbjct: 34283698 cgacaagactgcaactatgcaagggaacacgatgcgatttaaacgacaagctcgccgctt 34283757 Query: 293 cagaagcacaacttggtggagaaatgtcaaactcacg 329 ||||| ||| ||||||||||||||||| |||||| Sbjct: 34283758 cagaaacaccgtctggtggagaaatgtcaagctcacg 34283794 Score = 77.8 bits (39), Expect = 5e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 1 atatccatggaaagtttgttaagacatatggccgcgctgcactgacagctcttgcttatg 60 ||||||| |||| |||||| ||||| ||||| || ||||| || || ||||||||||||| Sbjct: 34283274 atatccacggaaggtttgtcaagacgtatggtcgtgctgctctcactgctcttgcttatg 34283333 Query: 61 caatgaatgacgaattctcaagggttctcagtcagcaaatggactactattcaaa 115 | |||||||| || ||||| |||||| | | || |||||||||||||| ||||| Sbjct: 34283334 cgatgaatgatgagttctcgagggttttgggccaacaaatggactactactcaaa 34283388 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ataaattcgtctcgtggtgt 455 |||||||||||||||||||| Sbjct: 21863462 ataaattcgtctcgtggtgt 21863481 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 382 tgtgccacggcttcaccttgccgacttg 409 ||||||||||||||||||| ||| |||| Sbjct: 34284059 tgtgccacggcttcaccttaccgtcttg 34284086
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 81.8 bits (41), Expect = 3e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 173 tgttatgattgataatatcgataaagtacttgaaagaggtgaccgtttagacctattggt 232 ||||||||| || || || || |||||||| || |||||||| ||| | || || ||||| Sbjct: 118911 tgttatgatcgacaacattgacaaagtactcgagagaggtgatcgtctggagctgttggt 118970 Query: 233 ggacaagactacaactatgcaaggaaatacagttcgtttcaaaagacaagctcgccgcta 292 ||||||||| ||||||||||||| || || | || || ||| ||||||||||||||| Sbjct: 118971 cgacaagactgcaactatgcaagggaacacgatgcgatttaaacgacaagctcgccgctt 119030 Query: 293 cagaagcacaacttggtggagaaatgtcaaactcacg 329 ||||| ||| ||||||||||||||||| |||||| Sbjct: 119031 cagaaacaccgtctggtggagaaatgtcaagctcacg 119067 Score = 77.8 bits (39), Expect = 5e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 1 atatccatggaaagtttgttaagacatatggccgcgctgcactgacagctcttgcttatg 60 ||||||| |||| |||||| ||||| ||||| || ||||| || || ||||||||||||| Sbjct: 118547 atatccacggaaggtttgtcaagacgtatggtcgtgctgctctcactgctcttgcttatg 118606 Query: 61 caatgaatgacgaattctcaagggttctcagtcagcaaatggactactattcaaa 115 | |||||||| || ||||| |||||| | | || |||||||||||||| ||||| Sbjct: 118607 cgatgaatgatgagttctcgagggttttgggccaacaaatggactactactcaaa 118661 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 382 tgtgccacggcttcaccttgccgacttg 409 ||||||||||||||||||| ||| |||| Sbjct: 119332 tgtgccacggcttcaccttaccgtcttg 119359
>dbj|AK226405.1| Arabidopsis thaliana mRNA for vesicle-associated membrane protein 7C, complete cds, clone: RAFL06-07-E23 Length = 1129 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 45 acagctcttgcttatgcaatgaatgacgaattctcaagggttctcagtcagcaaatggac 104 ||||| || ||||||||||||||||| |||||||| || |||||||||||||| || ||| Sbjct: 508 acagcactagcttatgcaatgaatgaggaattctctagagttctcagtcagcagattgac 567 Query: 105 tactattcaaatgacccta 123 || || || ||||| |||| Sbjct: 568 tattactctaatgatccta 586
>ref|NM_119367.2| Arabidopsis thaliana VAMP7C (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7C) (VAMP7C) mRNA, complete cds Length = 1182 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 45 acagctcttgcttatgcaatgaatgacgaattctcaagggttctcagtcagcaaatggac 104 ||||| || ||||||||||||||||| |||||||| || |||||||||||||| || ||| Sbjct: 517 acagcactagcttatgcaatgaatgaggaattctctagagttctcagtcagcagattgac 576 Query: 105 tactattcaaatgacccta 123 || || || ||||| |||| Sbjct: 577 tattactctaatgatccta 595
>gb|AY125553.1| Arabidopsis thaliana AT4g32150/F10N7_40 mRNA, complete cds Length = 660 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 45 acagctcttgcttatgcaatgaatgacgaattctcaagggttctcagtcagcaaatggac 104 ||||| || ||||||||||||||||| |||||||| || |||||||||||||| || ||| Sbjct: 289 acagcactagcttatgcaatgaatgaggaattctctagagttctcagtcagcagattgac 348 Query: 105 tactattcaaatgacccta 123 || || || ||||| |||| Sbjct: 349 tattactctaatgatccta 367
>gb|AF439840.1|AF439840 Arabidopsis thaliana AT4g32150/F10N7_40 mRNA, complete cds Length = 1070 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 45 acagctcttgcttatgcaatgaatgacgaattctcaagggttctcagtcagcaaatggac 104 ||||| || ||||||||||||||||| |||||||| || |||||||||||||| || ||| Sbjct: 459 acagcactagcttatgcaatgaatgaggaattctctagagttctcagtcagcagattgac 518 Query: 105 tactattcaaatgacccta 123 || || || ||||| |||| Sbjct: 519 tattactctaatgatccta 537
>gb|AY088128.1| Arabidopsis thaliana clone 41543 mRNA, complete sequence Length = 1102 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 45 acagctcttgcttatgcaatgaatgacgaattctcaagggttctcagtcagcaaatggac 104 ||||| || ||||||||||||||||| |||||||| || |||||||||||||| || ||| Sbjct: 455 acagcactagcttatgcaatgaatgaggaattctctagagttctcagtcagcagattgac 514 Query: 105 tactattcaaatgacccta 123 || || || ||||| |||| Sbjct: 515 tattactctaatgatccta 533
>emb|AL021636.3|ATF10N7 Arabidopsis thaliana DNA chromosome 4, BAC clone F10N7 (ESSA project) Length = 96585 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 45 acagctcttgcttatgcaatgaatgacgaattctcaagggttctcagtcagcaaatggac 104 ||||| || ||||||||||||||||| |||||||| || |||||||||||||| || ||| Sbjct: 12148 acagcactagcttatgcaatgaatgaggaattctctagagttctcagtcagcagattgac 12207 Query: 105 tactattcaaatgacccta 123 || || || ||||| |||| Sbjct: 12208 tattactctaatgatccta 12226
>emb|BX828118.1|CNS0A3VN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH54ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1065 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 45 acagctcttgcttatgcaatgaatgacgaattctcaagggttctcagtcagcaaatggac 104 ||||| || ||||||||||||||||| |||||||| || |||||||||||||| || ||| Sbjct: 491 acagcactagcttatgcaatgaatgaggaattctctagagttctcagtcagcagattgac 550 Query: 105 tactattcaaatgacccta 123 || || || ||||| |||| Sbjct: 551 tattactctaatgatccta 569
>emb|BX827176.1|CNS0A3PR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS1ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1038 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 45 acagctcttgcttatgcaatgaatgacgaattctcaagggttctcagtcagcaaatggac 104 ||||| || ||||||||||||||||| |||||||| || |||||||||||||| || ||| Sbjct: 445 acagcactagcttatgcaatgaatgaggaattctctagagttctcagtcagcagattgac 504 Query: 105 tactattcaaatgacccta 123 || || || ||||| |||| Sbjct: 505 tattactctaatgatccta 523
>gb|AF025332.1|AF025332 Arabidopsis thaliana vesicle-associated membrane protein 7C (At VAMP7C) mRNA, complete cds Length = 1139 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 45 acagctcttgcttatgcaatgaatgacgaattctcaagggttctcagtcagcaaatggac 104 ||||| || ||||||||||||||||| |||||||| || |||||||||||||| || ||| Sbjct: 505 acagcactagcttatgcaatgaatgaggaattctctagagttctcagtcagcagattgac 564 Query: 105 tactattcaaatgacccta 123 || || || ||||| |||| Sbjct: 565 tattactctaatgatccta 583
>emb|AL161580.2|ATCHRIV76 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 76 Length = 165698 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 45 acagctcttgcttatgcaatgaatgacgaattctcaagggttctcagtcagcaaatggac 104 ||||| || ||||||||||||||||| |||||||| || |||||||||||||| || ||| Sbjct: 101805 acagcactagcttatgcaatgaatgaggaattctctagagttctcagtcagcagattgac 101746 Query: 105 tactattcaaatgacccta 123 || || || ||||| |||| Sbjct: 101745 tattactctaatgatccta 101727
>dbj|AK227613.1| Arabidopsis thaliana mRNA for synaptobrevin-like protein, partial cds, clone: RAFL14-20-M13 Length = 940 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 54 gcttatgcaatgaatgacgaattctcaagggtt 86 ||||||||||||||||| ||||||||||||||| Sbjct: 197 gcttatgcaatgaatgatgaattctcaagggtt 229
>ref|NM_122141.2| Arabidopsis thaliana ATVAMP714 (ATVAMP714) mRNA, complete cds Length = 1034 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 54 gcttatgcaatgaatgacgaattctcaagggtt 86 ||||||||||||||||| ||||||||||||||| Sbjct: 301 gcttatgcaatgaatgatgaattctcaagggtt 333
>gb|AY116956.1| Arabidopsis thaliana AT5g22360/MWD9_16 mRNA, complete cds Length = 417 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 54 gcttatgcaatgaatgacgaattctcaagggtt 86 ||||||||||||||||| ||||||||||||||| Sbjct: 301 gcttatgcaatgaatgatgaattctcaagggtt 333
>gb|AY057699.1| Arabidopsis thaliana AT5g22360/MWD9_16 mRNA, complete cds Length = 1643 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 54 gcttatgcaatgaatgacgaattctcaagggtt 86 ||||||||||||||||| ||||||||||||||| Sbjct: 405 gcttatgcaatgaatgatgaattctcaagggtt 437
>dbj|AB007651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD9 Length = 85421 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 54 gcttatgcaatgaatgacgaattctcaagggtt 86 ||||||||||||||||| ||||||||||||||| Sbjct: 44177 gcttatgcaatgaatgatgaattctcaagggtt 44145
>emb|BX831227.1|CNS0A0PZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1241 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 54 gcttatgcaatgaatgacgaattctcaagggtt 86 ||||||||||||||||| ||||||||||||||| Sbjct: 531 gcttatgcaatgaatgatgaattctcaagggtt 563
>gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete sequence Length = 126907 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 539 attttttgtgtgtgtagaaaga 560 |||||||||||||||||||||| Sbjct: 54368 attttttgtgtgtgtagaaaga 54347
>gb|AC136507.19| Medicago truncatula clone mth2-24o19, complete sequence Length = 131025 Score = 44.1 bits (22), Expect = 0.63 Identities = 67/82 (81%) Strand = Plus / Plus Query: 248 tatgcaaggaaatacagttcgtttcaaaagacaagctcgccgctacagaagcacaacttg 307 |||||||||||||||| |||| || | || |||||||| |||| |||||||| || Sbjct: 117753 tatgcaaggaaatacatttcgctttagaaagcaagctcgtcgctttagaagcactgtctg 117812 Query: 308 gtggagaaatgtcaaactcacg 329 |||||| |||||||| |||||| Sbjct: 117813 gtggaggaatgtcaagctcacg 117834
>gb|AC146941.8| Medicago truncatula clone mth2-133o10, complete sequence Length = 134901 Score = 44.1 bits (22), Expect = 0.63 Identities = 67/82 (81%) Strand = Plus / Minus Query: 248 tatgcaaggaaatacagttcgtttcaaaagacaagctcgccgctacagaagcacaacttg 307 |||||||||||||||| |||| || | || |||||||| |||| |||||||| || Sbjct: 40145 tatgcaaggaaatacatttcgctttagaaagcaagctcgtcgctttagaagcactgtctg 40086 Query: 308 gtggagaaatgtcaaactcacg 329 |||||| |||||||| |||||| Sbjct: 40085 gtggaggaatgtcaagctcacg 40064
>gb|AC126429.4| Mus musculus BAC clone RP24-403O23 from chromosome 6, complete sequence Length = 152532 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ggaaagtttgttaagacatatg 30 |||||||||||||||||||||| Sbjct: 113504 ggaaagtttgttaagacatatg 113525
>gb|AC004125.1|HUAC004125 Homo sapiens Chromosome 16 BAC clone CIT987SK-625P11, complete sequence Length = 194020 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 533 aaaagtattttttgtgtgtgta 554 |||||||||||||||||||||| Sbjct: 74309 aaaagtattttttgtgtgtgta 74330
>gb|AC110378.4| Mus musculus BAC clone RP24-193H8 from 6, complete sequence Length = 166527 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ggaaagtttgttaagacatatg 30 |||||||||||||||||||||| Sbjct: 40571 ggaaagtttgttaagacatatg 40592
>gb|AC107027.9| Homo sapiens 3 BAC RP11-517B11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171562 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 539 attttttgtgtgtgtagaaaga 560 |||||||||||||||||||||| Sbjct: 140953 attttttgtgtgtgtagaaaga 140974
>emb|AL935302.7| Zebrafish DNA sequence from clone DKEY-13N1 in linkage group 15, complete sequence Length = 152706 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 529 tgcaaaaagtattttttgtgtgtgta 554 |||||||||| ||||||||||||||| Sbjct: 82431 tgcaaaaagttttttttgtgtgtgta 82406
>emb|CR936497.9| Zebrafish DNA sequence from clone DKEYP-30D5 in linkage group 9, complete sequence Length = 162054 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 aaagtattttttgtgtgtgta 554 ||||||||||||||||||||| Sbjct: 75674 aaagtattttttgtgtgtgta 75694
>emb|BX284665.21| Zebrafish DNA sequence from clone DKEY-65I13 in linkage group 23, complete sequence Length = 229102 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 527 attgcaaaaagtattttttgtgtgt 551 |||||||||||| |||||||||||| Sbjct: 31150 attgcaaaaagttttttttgtgtgt 31126
>gb|AC189707.2| Pan troglodytes chromosome X clone RP43-58D6 map human ortholog p11.3, complete sequence Length = 154936 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 gaattctcaagggttctcagtcagc 96 ||||||||||||| ||||||||||| Sbjct: 17322 gaattctcaagggctctcagtcagc 17298
>gb|AC078834.5| Homo sapiens BAC clone RP11-69O3 from 7, complete sequence Length = 154737 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 tgtgtgtgtagaaagagaaag 565 ||||||||||||||||||||| Sbjct: 29187 tgtgtgtgtagaaagagaaag 29207
>gb|AC122266.2| Mus musculus BAC clone RP23-213K18 from 8, complete sequence Length = 195246 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 cttgtctgtctcccagcccag 490 ||||||||||||||||||||| Sbjct: 55700 cttgtctgtctcccagcccag 55720
>gb|AC163681.3| Mus musculus BAC clone RP24-113I15 from chromosome 14, complete sequence Length = 192183 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 tgtgtgtgtagaaagagaaag 565 ||||||||||||||||||||| Sbjct: 152739 tgtgtgtgtagaaagagaaag 152759
>gb|AC158362.5| Mus musculus BAC clone RP23-214K5 from chromosome 8, complete sequence Length = 201185 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 cttgtctgtctcccagcccag 490 ||||||||||||||||||||| Sbjct: 194409 cttgtctgtctcccagcccag 194389
>emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on chromosome 1 Contains a novel pseudogene, a farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) (FDPS) pseudogene, a novel gene (LOC339476) and the 5' end of a solute carrier family 4 (anion exchanger) member 1 adaptor protein (SLC4A1AP) pseudogene, complete sequence Length = 190912 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 545 tgtgtgtgtagaaagagaaaggaga 569 |||||||||||||||||| |||||| Sbjct: 64243 tgtgtgtgtagaaagagagaggaga 64267
>gb|AC155810.5| Mus musculus BAC clone RP24-181I18 from chromosome 8, complete sequence Length = 168291 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 cttgtctgtctcccagcccag 490 ||||||||||||||||||||| Sbjct: 168247 cttgtctgtctcccagcccag 168267
>gb|AC024061.7|AC024061 Homo sapiens chromosome 15 clone RP11-232J12 map 15q21.3, complete sequence Length = 157042 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 tgtgtgtgtagaaagagaaag 565 ||||||||||||||||||||| Sbjct: 144084 tgtgtgtgtagaaagagaaag 144104
>gb|AC066611.6|AC066611 Homo sapiens chromosome 15 clone RP11-348P16 map 15q21.3, complete sequence Length = 184355 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 tgtgtgtgtagaaagagaaag 565 ||||||||||||||||||||| Sbjct: 515 tgtgtgtgtagaaagagaaag 535
>gb|AC097460.3| Homo sapiens BAC clone RP11-15B17 from 4, complete sequence Length = 164370 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 tgtgtgtgtagaaagagaaag 565 ||||||||||||||||||||| Sbjct: 48218 tgtgtgtgtagaaagagaaag 48238
>gb|AC154840.2| Mus musculus BAC clone RP23-61I7 from chromosome 14, complete sequence Length = 195596 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 tgtgtgtgtagaaagagaaag 565 ||||||||||||||||||||| Sbjct: 3059 tgtgtgtgtagaaagagaaag 3079
>gb|AC147335.2| Pan troglodytes BAC clone RP43-4C1 from chromosome 7, complete sequence Length = 186272 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 tgtgtgtgtagaaagagaaag 565 ||||||||||||||||||||| Sbjct: 89779 tgtgtgtgtagaaagagaaag 89759
>emb|BX950870.7| Zebrafish DNA sequence from clone DKEY-242M17 in linkage group 6, complete sequence Length = 186279 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 atgattgataatatcgataaa 197 ||||||||||||||||||||| Sbjct: 182766 atgattgataatatcgataaa 182786
>dbj|AP000377.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYM9 Length = 71178 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 tattttttgtgtgtgtagaaa 558 ||||||||||||||||||||| Sbjct: 65943 tattttttgtgtgtgtagaaa 65963
>emb|BX682531.11| Zebrafish DNA sequence from clone CH211-12C17 in linkage group 23, complete sequence Length = 171113 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 aaaagtattttttgtgtgtgt 553 ||||||||||||||||||||| Sbjct: 63597 aaaagtattttttgtgtgtgt 63577
>emb|BX828121.1|CNS0A3WK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1020 Score = 42.1 bits (21), Expect = 2.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 45 acagctcttgcttatgcaatgaatgacgaattctcaagggttctcagtcagca 97 ||||| || ||||||||||| ||||| |||||||| | ||||||||| |||| Sbjct: 463 acagcactagcttatgcaatcaatgaggaattctctcgagttctcagtgagca 515
>emb|AL928977.10| Zebrafish DNA sequence from clone DKEY-24D19 in linkage group 20, complete sequence Length = 165014 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 527 attgcaaaaagtattttttgtgtgt 551 |||||||||||| |||||||||||| Sbjct: 54241 attgcaaaaagttttttttgtgtgt 54265
>emb|CR450837.12| Zebrafish DNA sequence from clone CH211-51L13 in linkage group 16, complete sequence Length = 166747 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 533 aaaagtattttttgtgtgtgt 553 ||||||||||||||||||||| Sbjct: 154664 aaaagtattttttgtgtgtgt 154684
>emb|CT832966.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA208K16, full insert sequence Length = 214 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 382 tgtgccacggcttcaccttgccgacttg 409 ||||||| |||||||||||||| ||||| Sbjct: 11 tgtgccatggcttcaccttgcctacttg 38
>gb|AC183597.3| Pan troglodytes BAC clone CH251-565A12 from chromosome x, complete sequence Length = 218419 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 gtattttttgtgtgtgtaga 556 |||||||||||||||||||| Sbjct: 115051 gtattttttgtgtgtgtaga 115070
>gb|CP000449.1| Maricaulis maris MCS10, complete genome Length = 3368780 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 gcgctgcactgacagctctt 53 |||||||||||||||||||| Sbjct: 2662401 gcgctgcactgacagctctt 2662420
>ref|NM_127723.2| Arabidopsis thaliana heat shock protein binding / unfolded protein binding (AT2G21510) mRNA, complete cds Length = 1324 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aagacaagctcgccgctaca 294 |||||||||||||||||||| Sbjct: 513 aagacaagctcgccgctaca 532
>gb|AC152953.1| Mus musculus 10 BAC RP23-403E19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 211343 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 tgtgtgtgtagaaagagaaa 564 |||||||||||||||||||| Sbjct: 196539 tgtgtgtgtagaaagagaaa 196520
>gb|U80028.1| Caenorhabditis elegans cosmid C44C3, complete sequence Length = 27471 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 aaaaagtattttttgtgtgt 551 |||||||||||||||||||| Sbjct: 26849 aaaaagtattttttgtgtgt 26868
>gb|AC145687.4| Pan troglodytes BAC clone CH251-281C1 from X, complete sequence Length = 138000 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 gtattttttgtgtgtgtaga 556 |||||||||||||||||||| Sbjct: 13776 gtattttttgtgtgtgtaga 13795
>gb|AC146788.13| Medicago truncatula clone mth2-11a6, complete sequence Length = 116349 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 aaaaagtattttttgtgtgt 551 |||||||||||||||||||| Sbjct: 103175 aaaaagtattttttgtgtgt 103194
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 tgcagcgccagcgcaaccgg 522 |||||||||||||||||||| Sbjct: 2325032 tgcagcgccagcgcaaccgg 2325051
>gb|AC124690.4| Mus musculus BAC clone RP24-157B13 from chromosome 1, complete sequence Length = 178992 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 atatccatggaaagtttgtt 20 |||||||||||||||||||| Sbjct: 28366 atatccatggaaagtttgtt 28347
>gb|AC125524.4| Mus musculus BAC clone RP24-378N16 from chromosome 6, complete sequence Length = 175917 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 tgtgtgtgtagaaagagaaa 564 |||||||||||||||||||| Sbjct: 32989 tgtgtgtgtagaaagagaaa 32970
>gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, complete sequence Length = 208678 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 atttattctgtaattgtgac 599 |||||||||||||||||||| Sbjct: 81905 atttattctgtaattgtgac 81886
>gb|AC101677.8| Mus musculus chromosome 10, clone RP23-138N1, complete sequence Length = 206087 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 tgtgtgtgtagaaagagaaa 564 |||||||||||||||||||| Sbjct: 202537 tgtgtgtgtagaaagagaaa 202556
>gb|AC163665.4| Mus musculus BAC clone RP23-325J23 from chromosome 16, complete sequence Length = 209920 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 tgtgtgtgtagaaagagaaa 564 |||||||||||||||||||| Sbjct: 134015 tgtgtgtgtagaaagagaaa 133996
>dbj|AK134802.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330570J21 product:unclassifiable, full insert sequence Length = 1801 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 tgtgtgtgtagaaagagaaa 564 |||||||||||||||||||| Sbjct: 87 tgtgtgtgtagaaagagaaa 106
>gb|AC103620.12| Mus musculus chromosome 1, clone RP24-219C22, complete sequence Length = 171728 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 tgtgtgtgtagaaagagaaa 564 |||||||||||||||||||| Sbjct: 106877 tgtgtgtgtagaaagagaaa 106896
>gb|AC158790.5| Mus musculus chromosome 1, clone RP23-223M9, complete sequence Length = 178205 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 tgtgtgtgtagaaagagaaa 564 |||||||||||||||||||| Sbjct: 44488 tgtgtgtgtagaaagagaaa 44507
>emb|CR936411.5| Zebrafish DNA sequence from clone CH211-265O23 in linkage group 4, complete sequence Length = 93780 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 tttgtgtgtgtagaaagaga 562 |||||||||||||||||||| Sbjct: 76016 tttgtgtgtgtagaaagaga 75997
>gb|AC160537.6| Mus musculus chromosome 8, clone RP24-95H19, complete sequence Length = 188409 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccatggaaagtttgttaaga 24 |||||||||||||||||||| Sbjct: 91317 ccatggaaagtttgttaaga 91336
>dbj|AK220627.1| Arabidopsis thaliana mRNA for putative DnaJ protein, complete cds, clone: RAFL21-43-N20 Length = 1263 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aagacaagctcgccgctaca 294 |||||||||||||||||||| Sbjct: 454 aagacaagctcgccgctaca 473
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 aagacaagctcgccgctaca 294 |||||||||||||||||||| Sbjct: 108950 aagacaagctcgccgctaca 108931
>gb|AC092694.6| Homo sapiens 3q BAC RP11-172A10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151549 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 gtattttttgtgtgtgtaga 556 |||||||||||||||||||| Sbjct: 18948 gtattttttgtgtgtgtaga 18929
>emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 in linkage group 10, complete sequence Length = 121560 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 atcaaatcaaccgtatgagaggcg 153 ||||||||||||||| |||||||| Sbjct: 96371 atcaaatcaaccgtaagagaggcg 96394
>emb|BX927322.12| Zebrafish DNA sequence from clone CH211-101J8 in linkage group 21, complete sequence Length = 110730 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 aaagtattttttgtgtgtgt 553 |||||||||||||||||||| Sbjct: 32221 aaagtattttttgtgtgtgt 32240
>emb|AL512344.13| Human DNA sequence from clone RP11-476F13 on chromosome 6, complete sequence Length = 42831 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 atggcttgtctgtctcccag 485 |||||||||||||||||||| Sbjct: 381 atggcttgtctgtctcccag 400
>emb|AL137009.8| Human DNA sequence from clone RP3-370O5 on chromosome 6 Contains the 5' end of a novel gene containing FLJ13942 and a CpG island, complete sequence Length = 113254 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tgcatccggtgagagggccc 427 |||||||||||||||||||| Sbjct: 53431 tgcatccggtgagagggccc 53412
>emb|AL009179.1|HS97D16 Human DNA sequence from clone RP1-97D16 on chromosome 6p21.3-22.2 Contains a novel pseudogene, a 60S Ribosomal protein L30 (RPL30) pseudogene, H4 histone family member F pseudogene H4FFP and histone genes H2BFC, H2AFC, H3FK. Contains ESTs, STSs, GSSs and two CpG islands, complete sequence Length = 139904 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 aagtattttttgtgtgtgta 554 |||||||||||||||||||| Sbjct: 133933 aagtattttttgtgtgtgta 133952
>emb|BX042075.1|CNS094MN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC13DF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 824 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cttcttcgtgtgccacggct 393 |||||||||||||||||||| Sbjct: 786 cttcttcgtgtgccacggct 805
>gb|AC139525.3| Medicago truncatula clone mth2-26o22, complete sequence Length = 103039 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 aaaaagtattttttgtgtgt 551 |||||||||||||||||||| Sbjct: 16570 aaaaagtattttttgtgtgt 16551
>emb|BX035976.1|CNS08ZX8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7CC09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 925 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cttcttcgtgtgccacggct 393 |||||||||||||||||||| Sbjct: 794 cttcttcgtgtgccacggct 813
>gb|AC102680.10| Mus musculus chromosome 8, clone RP24-88L18, complete sequence Length = 201260 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccatggaaagtttgttaaga 24 |||||||||||||||||||| Sbjct: 190336 ccatggaaagtttgttaaga 190355
>gb|AY085443.1| Arabidopsis thaliana clone 151802 mRNA, complete sequence Length = 1328 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aagacaagctcgccgctaca 294 |||||||||||||||||||| Sbjct: 516 aagacaagctcgccgctaca 535
>gb|AC127070.10| Homo sapiens 12 BAC RP11-46H11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181012 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 attttttgtgtgtgtagaaa 558 |||||||||||||||||||| Sbjct: 134073 attttttgtgtgtgtagaaa 134092
>emb|BX571708.4| Zebrafish DNA sequence from clone DKEYP-74B2, complete sequence Length = 193197 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 aaaaagtattttttgtgtgt 551 |||||||||||||||||||| Sbjct: 103852 aaaaagtattttttgtgtgt 103833
>dbj|AP005835.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008E01 Length = 156856 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ataaattcgtctcgtggtgt 455 |||||||||||||||||||| Sbjct: 155861 ataaattcgtctcgtggtgt 155880
>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689H05 Length = 135803 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ataaattcgtctcgtggtgt 455 |||||||||||||||||||| Sbjct: 46747 ataaattcgtctcgtggtgt 46766
>emb|BX819241.1|CNS0AAE9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1200 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aagacaagctcgccgctaca 294 |||||||||||||||||||| Sbjct: 441 aagacaagctcgccgctaca 460
>gb|AC154244.2| Mus musculus BAC clone RP24-321P20 from 17, complete sequence Length = 172093 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 tgtgtgtgtagaaagagaaa 564 |||||||||||||||||||| Sbjct: 92795 tgtgtgtgtagaaagagaaa 92776
>gb|AC153877.5| Mus musculus 6 BAC RP23-258E21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232977 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 tgtgtgtgtagaaagagaaa 564 |||||||||||||||||||| Sbjct: 161358 tgtgtgtgtagaaagagaaa 161339
>ref|NM_001044405.1| Xenopus tropicalis macoilin (LOC733452), mRNA gb|AY845023.1| Xenopus tropicalis macoilin mRNA, complete cds Length = 2731 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 agtattttttgtgtgtgtag 555 |||||||||||||||||||| Sbjct: 430 agtattttttgtgtgtgtag 449
>emb|CR761745.2| Xenopus tropicalis finished cDNA, clone TGas139j09 Length = 1562 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 agtattttttgtgtgtgtag 555 |||||||||||||||||||| Sbjct: 355 agtattttttgtgtgtgtag 374
>emb|AL929457.12| Zebrafish DNA sequence from clone CH211-153I8 in linkage group 14, complete sequence Length = 164299 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 aaaaagtattttttgtgtgt 551 |||||||||||||||||||| Sbjct: 21788 aaaaagtattttttgtgtgt 21769
>gb|AC091069.2| Homo sapiens chromosome 3 clone RP11-161L3 map 3p, complete sequence Length = 164802 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 tgtgtgtgtagaaagagaaa 564 |||||||||||||||||||| Sbjct: 74727 tgtgtgtgtagaaagagaaa 74708 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 123,740,058 Number of extensions: 7035443 Number of successful extensions: 151509 Number of sequences better than 10.0: 97 Number of HSP's gapped: 151495 Number of HSP's successfully gapped: 113 Length of query: 666 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 644 Effective length of database: 18,508,616,841 Effective search space: 11919549245604 Effective search space used: 11919549245604 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)