| Clone Name | FLbaf105e20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072527:Os12g0561000 | 127 | 6e-30 | 2 | AB027123:Os12g0561000 | 127 | 6e-30 | 3 | AK106416:Os09g0572100 | 29 | 2.4 | 4 | AK066582:Os09g0572100 | 29 | 2.4 | 5 | AK110718:Os03g0288700 | 28 | 4.1 | 6 | Os08g0335000:Os08g0335000 | 28 | 5.4 | 7 | Os01g0290300:Os01g0290300 | 27 | 7.1 | 8 | AK109061:Os05g0165500 | 27 | 9.2 |
|---|
>AK072527:Os12g0561000 | Length = 63 Score = 127 bits (318), Expect = 6e-30 Identities = 60/63 (95%), Positives = 62/63 (98%) Frame = +3 Query: 117 MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISVV 296 MAGGR+AHATLKGPSVVKEI IGLTLGLVAGG+WKMHHWNEQRKTRSFYDMLEKGQISVV Sbjct: 1 MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVV 60 Query: 297 VEE 305 VEE Sbjct: 61 VEE 63
>AB027123:Os12g0561000 | Length = 63 Score = 127 bits (318), Expect = 6e-30 Identities = 60/63 (95%), Positives = 62/63 (98%) Frame = +3 Query: 117 MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISVV 296 MAGGR+AHATLKGPSVVKEI IGLTLGLVAGG+WKMHHWNEQRKTRSFYDMLEKGQISVV Sbjct: 1 MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVV 60 Query: 297 VEE 305 VEE Sbjct: 61 VEE 63
>AK106416:Os09g0572100 | Length = 355 Score = 28.9 bits (63), Expect = 2.4 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -3 Query: 131 SAACHLLAVGLRCQNALPPPE 69 + A LL VGLRC +A PPPE Sbjct: 298 AVAERLLDVGLRCASASPPPE 318
>AK066582:Os09g0572100 | Length = 355 Score = 28.9 bits (63), Expect = 2.4 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -3 Query: 131 SAACHLLAVGLRCQNALPPPE 69 + A LL VGLRC +A PPPE Sbjct: 298 AVAERLLDVGLRCASASPPPE 318
>AK110718:Os03g0288700 | Length = 224 Score = 28.1 bits (61), Expect = 4.1 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = +3 Query: 153 GPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQIS 290 G V ++F G +GLV G +W +W ++ M+E+ I+ Sbjct: 150 GYHTVAQVFAGAVVGLVFGAIW---YWIVNTMLVEYFPMIEESAIA 192
>Os08g0335000:Os08g0335000 | Length = 1130 Score = 27.7 bits (60), Expect = 5.4 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +1 Query: 91 WHLSPTASRWQAAELHMRPSRGRAW*RRSSLDSPLGWLLVVCGRCITGT 237 W P A R + + R + G AW R ++ SP G + CGR GT Sbjct: 1050 WSSGPPAVRRRRPSI--RWANGAAW-GRVAVGSPAGERIAACGRTAVGT 1095
>Os01g0290300:Os01g0290300 | Length = 762 Score = 27.3 bits (59), Expect = 7.1 Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = -1 Query: 484 DEKLNSKRFNVLKWWCAYFHDNLHSNHSVMLSTEFHKLLAKPKWQKTSRC--RTSGSARQ 311 +E +++K FN+L++W N++ + ++S+ + L P +S C T+G Sbjct: 654 NEAIDNKHFNLLRYW------NVNCHRFPVVSSLAKRFLTVPVSSVSSECTFSTAGRVLD 707 Query: 310 NYSST 296 +Y S+ Sbjct: 708 DYRSS 712
>AK109061:Os05g0165500 | Length = 227 Score = 26.9 bits (58), Expect = 9.2 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = -1 Query: 355 WQKTSRCRTSGSARQNYSSTTTL 287 W++TS C TS S+ +YSS +++ Sbjct: 119 WRRTSPCSTSSSSSWSYSSPSSV 141 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,215,850 Number of extensions: 294177 Number of successful extensions: 780 Number of sequences better than 10.0: 8 Number of HSP's gapped: 780 Number of HSP's successfully gapped: 8 Length of query: 188 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 93 Effective length of database: 11,595,960 Effective search space: 1078424280 Effective search space used: 1078424280 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)