ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf105e20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK072527:Os12g0561000 127 6e-30
2AB027123:Os12g0561000 127 6e-30
3AK106416:Os09g0572100 29 2.4
4AK066582:Os09g0572100 29 2.4
5AK110718:Os03g0288700 28 4.1
6Os08g0335000:Os08g0335000 28 5.4
7Os01g0290300:Os01g0290300 27 7.1
8AK109061:Os05g0165500 27 9.2

>AK072527:Os12g0561000 |
          Length = 63
 Score =  127 bits (318), Expect = 6e-30
 Identities = 60/63 (95%), Positives = 62/63 (98%)
 Frame = +3

Query: 117 MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISVV 296
           MAGGR+AHATLKGPSVVKEI IGLTLGLVAGG+WKMHHWNEQRKTRSFYDMLEKGQISVV
Sbjct: 1   MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVV 60

Query: 297 VEE 305
           VEE
Sbjct: 61  VEE 63



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>AB027123:Os12g0561000 |
          Length = 63

 Score =  127 bits (318), Expect = 6e-30
 Identities = 60/63 (95%), Positives = 62/63 (98%)
 Frame = +3

Query: 117 MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISVV 296
           MAGGR+AHATLKGPSVVKEI IGLTLGLVAGG+WKMHHWNEQRKTRSFYDMLEKGQISVV
Sbjct: 1   MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVV 60

Query: 297 VEE 305
           VEE
Sbjct: 61  VEE 63



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>AK106416:Os09g0572100 |
          Length = 355

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -3

Query: 131 SAACHLLAVGLRCQNALPPPE 69
           + A  LL VGLRC +A PPPE
Sbjct: 298 AVAERLLDVGLRCASASPPPE 318



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>AK066582:Os09g0572100 |
          Length = 355

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -3

Query: 131 SAACHLLAVGLRCQNALPPPE 69
           + A  LL VGLRC +A PPPE
Sbjct: 298 AVAERLLDVGLRCASASPPPE 318



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>AK110718:Os03g0288700 |
          Length = 224

 Score = 28.1 bits (61), Expect = 4.1
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 153 GPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQIS 290
           G   V ++F G  +GLV G +W   +W        ++ M+E+  I+
Sbjct: 150 GYHTVAQVFAGAVVGLVFGAIW---YWIVNTMLVEYFPMIEESAIA 192



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>Os08g0335000:Os08g0335000 |
          Length = 1130

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +1

Query: 91   WHLSPTASRWQAAELHMRPSRGRAW*RRSSLDSPLGWLLVVCGRCITGT 237
            W   P A R +   +  R + G AW  R ++ SP G  +  CGR   GT
Sbjct: 1050 WSSGPPAVRRRRPSI--RWANGAAW-GRVAVGSPAGERIAACGRTAVGT 1095



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>Os01g0290300:Os01g0290300 |
          Length = 762

 Score = 27.3 bits (59), Expect = 7.1
 Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = -1

Query: 484 DEKLNSKRFNVLKWWCAYFHDNLHSNHSVMLSTEFHKLLAKPKWQKTSRC--RTSGSARQ 311
           +E +++K FN+L++W      N++ +   ++S+   + L  P    +S C   T+G    
Sbjct: 654 NEAIDNKHFNLLRYW------NVNCHRFPVVSSLAKRFLTVPVSSVSSECTFSTAGRVLD 707

Query: 310 NYSST 296
           +Y S+
Sbjct: 708 DYRSS 712



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>AK109061:Os05g0165500 |
          Length = 227

 Score = 26.9 bits (58), Expect = 9.2
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -1

Query: 355 WQKTSRCRTSGSARQNYSSTTTL 287
           W++TS C TS S+  +YSS +++
Sbjct: 119 WRRTSPCSTSSSSSWSYSSPSSV 141


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,215,850
Number of extensions: 294177
Number of successful extensions: 780
Number of sequences better than 10.0: 8
Number of HSP's gapped: 780
Number of HSP's successfully gapped: 8
Length of query: 188
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 93
Effective length of database: 11,595,960
Effective search space: 1078424280
Effective search space used: 1078424280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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