ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf102e15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001054518.1| Oryza sativa (japonica cultivar-group) Os02g0725300 (Os02g0725300) mRNA, complete cds Length = 2345 Score = 1181 bits (596), Expect = 0.0 Identities = 1463/1751 (83%), Gaps = 2/1751 (0%) Strand = Plus / Plus Query: 257 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 316 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 255 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 314 Query: 317 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctctcggccagct 376 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| | |||| Sbjct: 315 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctcgctcaaagct 374 Query: 377 atgacgatgaccagctccccggcgtggacatatttgtgtgtacagcggacccagctcttg 436 | || ||| |||| ||| | |||||||| ||||| ||||||||||| ||| | | Sbjct: 375 acagtgaagacgagcttcccagtgtggacatttttgtctgtacagcggatccaacagcag 434 Query: 437 aaccacccatgcttgtcatctccacggttctgtctgtcatggcttatgactacccgccag 496 | ||||| ||||||||||||||||| ||| |||||||||||||||||||||||| ||| | Sbjct: 435 agccaccgatgcttgtcatctccactgttttgtctgtcatggcttatgactacctgcctg 494 Query: 497 agaagctaaacatctatttgtctgatgatgctggttccgcgataacattctacgctcttc 556 ||||||| |||||||| || ||||||||||||||||| | |||||||||||| ||| Sbjct: 495 agaagctgaacatctacttatctgatgatgctggttcggttttaacattctacgttctat 554 Query: 557 atgaggcatctgagtttgcaaagcactggattccattttgcaaaaattacaaggtggagc 616 |||||||| |||||||||||||| ||||||||||||||||| || ||||||||||| | Sbjct: 555 gcgaggcatccgagtttgcaaagcattggattccattttgcaagaagtacaaggtggaac 614 Query: 617 ccaggtccccagctgcctactttgcccaaggagatacccctcatgatgcttgtagccctc 676 |||| || |||||||| |||||||| ||| || | |||||| ||||| ||| | ||| Sbjct: 615 ccagatcaccagctgcttactttgctaaagtagcttcccctcctgatgggtgtggaccta 674 Query: 677 aagaattgcttcgcatgaaggagttgtacaaggatctgacagatcgcgtgaactcagtag 736 |||| | | || ||||||||| ||||||| || |||||||||| ||||||||||||| Sbjct: 675 aagagtggtttaccatgaaggaactgtacaaagacatgacagatcgtgtgaactcagtag 734 Query: 737 tacattcaggcaagattcccgaggttccagaatgcaaccgcagaggcttctctgaatgga 796 || ||||||| | ||| |||||||||||| |||| | |||||||||||| | |||| Sbjct: 735 taaattcaggtaggatccccgaggttccacgatgccattccagaggcttctcacagtgga 794 Query: 797 acgagacgataacacctggagatcacccttcaatagtccagattctaattgatagaaaca 856 | |||| | || || | ||||||||||| ||||| |||||| |||| ||||| |||| Sbjct: 795 atgagaatttcacttctagtgatcacccttctatagttcagattttaatcgatagtaaca 854 Query: 857 aaagaaaggcagttgatgtagatggaaatgcattgccaaaacttgtgtatatggcgcgcg 916 || ||||||||||||| | ||||||||||||||||||| |||||| |||||||| || | Sbjct: 855 aacaaaaggcagttgatattgatggaaatgcattgccaacacttgtatatatggcacgtg 914 Query: 917 agaagagacctcaggaacaacatcacttcaaagctggatcattaaatgctttgataagga 976 |||||| ||| ||| |||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 915 agaagaaaccccagaaacagcatcacttcaaagctggatctttgaatgctttgataaggg 974 Query: 977 tatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgatatgtactcca 1036 |||| || |||||||||||||| ||| |||| ||||||||||||||||||||||||| | Sbjct: 975 tatcatcagtgataagcaacagtccaatcatcatgaatgttgattgtgatatgtactcaa 1034 Query: 1037 acaactcagagtccatcagagatgcattatgcttcttcctagatgaagagcaaggtcaag 1096 |||| ||||||||||||||||| ||||| || || |||||||||||||||||||| |||| Sbjct: 1035 acaattcagagtccatcagagacgcattgtgttttttcctagatgaagagcaaggccaag 1094 Query: 1097 atatcggttttgtgcagtaccctc--aactttgacaatgtggtgcacaatgacatctatg 1154 |||| |||||||| ||||| |||| || ||||| ||||||||||||||||||||||||| Sbjct: 1095 atattggttttgtacagtatcctcagaattttgaaaatgtggtgcacaatgacatctatg 1154 Query: 1155 gaaatcccatcaacgttgtcaacgagttggataacccttgcttggatggatggggtggaa 1214 | | || ||||| |||||||||||||||||| | |||||||||||||| |||||||||| Sbjct: 1155 gccacccaatcaatgttgtcaacgagttggatcatccttgcttggatggttggggtggaa 1214 Query: 1215 tgtgttactatggtactggatgcttccatcgcagagaggccctctctggacaaatatata 1274 ||||||||||||| ||||||||||||||||| ||||||||||| | ||||| ||| |||| Sbjct: 1215 tgtgttactatggcactggatgcttccatcggagagaggccctatgtggacgaatctata 1274 Query: 1275 gtaaagattacaaggaagattgggctaaaggagtggggatagcagaaaatgcagatgaac 1334 || |||| || |||||||||||| ||| | || |||| | ||||| |||| |||| Sbjct: 1275 gtcaagaatataaggaagattggactagggtagcagggagaacagaagatgctaatgagt 1334 Query: 1335 tggaagacacgtcaaagtctctggtgacatgcacgtatgagcataacaccccgtggggca 1394 ||||||| | | | ||| || ||||| ||||| ||||||||||||||| ||||| | Sbjct: 1335 tggaagaaatgggcaggtcacttgtgacttgcacatatgagcataacaccatctggggaa 1394 Query: 1395 ttgagaaaggagtcagatatgggtgcccactggaggatgttattacaggattgcaaatcc 1454 ||||||| || || || ||||||||||||||||||||||| | ||||||||| ||||||| Sbjct: 1395 ttgagaagggggttaggtatgggtgcccactggaggatgtaactacaggattacaaatcc 1454 Query: 1455 aatgccgtgggtggagatcggtatactacaacccgtccagaaagggcttcttaggcaagg 1514 |||||||||| |||||||| || ||||||||||| |||||||| |||||||||| | Sbjct: 1455 aatgccgtggatggagatcagtgtactacaaccccaaaagaaagggattcttaggcatga 1514 Query: 1515 cgcctacctcactaggccagatcctggttcagcacaagagatggtcagaagggttcctcc 1574 | || ||||||||||||||||||||||| | | ||||||||||| ||||||||||||||| Sbjct: 1515 cacccacctcactaggccagatcctggtcctgtacaagagatggacagaagggttcctcc 1574 Query: 1575 aaatatccctctccaattacagcccctttttattaggccatggtaagatcaagctggggc 1634 ||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 1575 aaatatccctctcacggtacagccccttcttattaggtcatgggaagatcaagctgggtc 1634 Query: 1635 ttcaaatgggttactcggtctgtggcttctgggccctgaacagcttccccaccttttact 1694 |||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||| |||| Sbjct: 1635 ttcaaatgggctactctgtctgcggcttctgggccgtgaacagcttccccaccttgtact 1694 Query: 1695 atgtcatcatcccttcactttgcttcctcagtggcatctctgttttccctgagataacca 1754 |||||| || ||||| ||||||||||||| ||||||||| | || ||||||| ||| | Sbjct: 1695 atgtcacaattccttctctttgcttcctcaatggcatctccctctttcctgagaaaacta 1754 Query: 1755 gcccttggtgcattccattcatatacgtcgtggtagctgcatactcctggagcctaatgg 1814 |||| |||| ||| || || ||||| |||| || ||||||||||| ||| || | Sbjct: 1755 gcccctggttcataccctttgcgtacgttatggtggccgcatactcctgcagcttagcag 1814 Query: 1815 agtcgctgcaatgtggtgacactgctgtggagtggtggaacgcacaaaggatgtggctca 1874 |||| |||||||||||||||| ||| |||||||||||||| ||||| ||||||||||||| Sbjct: 1815 agtcactgcaatgtggtgacagtgcagtggagtggtggaatgcacagaggatgtggctca 1874 Query: 1875 tgagaaggaccacctcctacctcctggcggccatcgacacgattgggggaatgctgggca 1934 | ||||||| |||||| ||||||||||| |||||||||| | | |||| |||||| Sbjct: 1875 ttagaaggatcacctcatacctcctggcaaccatcgacacattccgcagaatattgggca 1934 Query: 1935 tctctgagtccgggttcgagctgacggtgaaggtggacgagtcgcaggctatggagaggt 1994 |||||||||| || ||| | ||||| |||||||| || | |||||| ||||||||| Sbjct: 1935 tctctgagtctggattcaacctgacagtgaaggtcactgacttgcaggccttggagaggt 1994 Query: 1995 acaagaagggg 2005 ||||||||||| Sbjct: 1995 acaagaagggg 2005
>dbj|AK101487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042D19, full insert sequence Length = 2346 Score = 1181 bits (596), Expect = 0.0 Identities = 1463/1751 (83%), Gaps = 2/1751 (0%) Strand = Plus / Plus Query: 257 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 316 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 256 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 315 Query: 317 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctctcggccagct 376 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| | |||| Sbjct: 316 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctcgctcaaagct 375 Query: 377 atgacgatgaccagctccccggcgtggacatatttgtgtgtacagcggacccagctcttg 436 | || ||| |||| ||| | |||||||| ||||| ||||||||||| ||| | | Sbjct: 376 acagtgaagacgagcttcccagtgtggacatttttgtctgtacagcggatccaacagcag 435 Query: 437 aaccacccatgcttgtcatctccacggttctgtctgtcatggcttatgactacccgccag 496 | ||||| ||||||||||||||||| ||| |||||||||||||||||||||||| ||| | Sbjct: 436 agccaccgatgcttgtcatctccactgttttgtctgtcatggcttatgactacctgcctg 495 Query: 497 agaagctaaacatctatttgtctgatgatgctggttccgcgataacattctacgctcttc 556 ||||||| |||||||| || ||||||||||||||||| | |||||||||||| ||| Sbjct: 496 agaagctgaacatctacttatctgatgatgctggttcggttttaacattctacgttctat 555 Query: 557 atgaggcatctgagtttgcaaagcactggattccattttgcaaaaattacaaggtggagc 616 |||||||| |||||||||||||| ||||||||||||||||| || ||||||||||| | Sbjct: 556 gcgaggcatccgagtttgcaaagcattggattccattttgcaagaagtacaaggtggaac 615 Query: 617 ccaggtccccagctgcctactttgcccaaggagatacccctcatgatgcttgtagccctc 676 |||| || |||||||| |||||||| ||| || | |||||| ||||| ||| | ||| Sbjct: 616 ccagatcaccagctgcttactttgctaaagtagcttcccctcctgatgggtgtggaccta 675 Query: 677 aagaattgcttcgcatgaaggagttgtacaaggatctgacagatcgcgtgaactcagtag 736 |||| | | || ||||||||| ||||||| || |||||||||| ||||||||||||| Sbjct: 676 aagagtggtttaccatgaaggaactgtacaaagacatgacagatcgtgtgaactcagtag 735 Query: 737 tacattcaggcaagattcccgaggttccagaatgcaaccgcagaggcttctctgaatgga 796 || ||||||| | ||| |||||||||||| |||| | |||||||||||| | |||| Sbjct: 736 taaattcaggtaggatccccgaggttccacgatgccattccagaggcttctcacagtgga 795 Query: 797 acgagacgataacacctggagatcacccttcaatagtccagattctaattgatagaaaca 856 | |||| | || || | ||||||||||| ||||| |||||| |||| ||||| |||| Sbjct: 796 atgagaatttcacttctagtgatcacccttctatagttcagattttaatcgatagtaaca 855 Query: 857 aaagaaaggcagttgatgtagatggaaatgcattgccaaaacttgtgtatatggcgcgcg 916 || ||||||||||||| | ||||||||||||||||||| |||||| |||||||| || | Sbjct: 856 aacaaaaggcagttgatattgatggaaatgcattgccaacacttgtatatatggcacgtg 915 Query: 917 agaagagacctcaggaacaacatcacttcaaagctggatcattaaatgctttgataagga 976 |||||| ||| ||| |||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 916 agaagaaaccccagaaacagcatcacttcaaagctggatctttgaatgctttgataaggg 975 Query: 977 tatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgatatgtactcca 1036 |||| || |||||||||||||| ||| |||| ||||||||||||||||||||||||| | Sbjct: 976 tatcatcagtgataagcaacagtccaatcatcatgaatgttgattgtgatatgtactcaa 1035 Query: 1037 acaactcagagtccatcagagatgcattatgcttcttcctagatgaagagcaaggtcaag 1096 |||| ||||||||||||||||| ||||| || || |||||||||||||||||||| |||| Sbjct: 1036 acaattcagagtccatcagagacgcattgtgttttttcctagatgaagagcaaggccaag 1095 Query: 1097 atatcggttttgtgcagtaccctc--aactttgacaatgtggtgcacaatgacatctatg 1154 |||| |||||||| ||||| |||| || ||||| ||||||||||||||||||||||||| Sbjct: 1096 atattggttttgtacagtatcctcagaattttgaaaatgtggtgcacaatgacatctatg 1155 Query: 1155 gaaatcccatcaacgttgtcaacgagttggataacccttgcttggatggatggggtggaa 1214 | | || ||||| |||||||||||||||||| | |||||||||||||| |||||||||| Sbjct: 1156 gccacccaatcaatgttgtcaacgagttggatcatccttgcttggatggttggggtggaa 1215 Query: 1215 tgtgttactatggtactggatgcttccatcgcagagaggccctctctggacaaatatata 1274 ||||||||||||| ||||||||||||||||| ||||||||||| | ||||| ||| |||| Sbjct: 1216 tgtgttactatggcactggatgcttccatcggagagaggccctatgtggacgaatctata 1275 Query: 1275 gtaaagattacaaggaagattgggctaaaggagtggggatagcagaaaatgcagatgaac 1334 || |||| || |||||||||||| ||| | || |||| | ||||| |||| |||| Sbjct: 1276 gtcaagaatataaggaagattggactagggtagcagggagaacagaagatgctaatgagt 1335 Query: 1335 tggaagacacgtcaaagtctctggtgacatgcacgtatgagcataacaccccgtggggca 1394 ||||||| | | | ||| || ||||| ||||| ||||||||||||||| ||||| | Sbjct: 1336 tggaagaaatgggcaggtcacttgtgacttgcacatatgagcataacaccatctggggaa 1395 Query: 1395 ttgagaaaggagtcagatatgggtgcccactggaggatgttattacaggattgcaaatcc 1454 ||||||| || || || ||||||||||||||||||||||| | ||||||||| ||||||| Sbjct: 1396 ttgagaagggggttaggtatgggtgcccactggaggatgtaactacaggattacaaatcc 1455 Query: 1455 aatgccgtgggtggagatcggtatactacaacccgtccagaaagggcttcttaggcaagg 1514 |||||||||| |||||||| || ||||||||||| |||||||| |||||||||| | Sbjct: 1456 aatgccgtggatggagatcagtgtactacaaccccaaaagaaagggattcttaggcatga 1515 Query: 1515 cgcctacctcactaggccagatcctggttcagcacaagagatggtcagaagggttcctcc 1574 | || ||||||||||||||||||||||| | | ||||||||||| ||||||||||||||| Sbjct: 1516 cacccacctcactaggccagatcctggtcctgtacaagagatggacagaagggttcctcc 1575 Query: 1575 aaatatccctctccaattacagcccctttttattaggccatggtaagatcaagctggggc 1634 ||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 1576 aaatatccctctcacggtacagccccttcttattaggtcatgggaagatcaagctgggtc 1635 Query: 1635 ttcaaatgggttactcggtctgtggcttctgggccctgaacagcttccccaccttttact 1694 |||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||| |||| Sbjct: 1636 ttcaaatgggctactctgtctgcggcttctgggccgtgaacagcttccccaccttgtact 1695 Query: 1695 atgtcatcatcccttcactttgcttcctcagtggcatctctgttttccctgagataacca 1754 |||||| || ||||| ||||||||||||| ||||||||| | || ||||||| ||| | Sbjct: 1696 atgtcacaattccttctctttgcttcctcaatggcatctccctctttcctgagaaaacta 1755 Query: 1755 gcccttggtgcattccattcatatacgtcgtggtagctgcatactcctggagcctaatgg 1814 |||| |||| ||| || || ||||| |||| || ||||||||||| ||| || | Sbjct: 1756 gcccctggttcataccctttgcgtacgttatggtggccgcatactcctgcagcttagcag 1815 Query: 1815 agtcgctgcaatgtggtgacactgctgtggagtggtggaacgcacaaaggatgtggctca 1874 |||| |||||||||||||||| ||| |||||||||||||| ||||| ||||||||||||| Sbjct: 1816 agtcactgcaatgtggtgacagtgcagtggagtggtggaatgcacagaggatgtggctca 1875 Query: 1875 tgagaaggaccacctcctacctcctggcggccatcgacacgattgggggaatgctgggca 1934 | ||||||| |||||| ||||||||||| |||||||||| | | |||| |||||| Sbjct: 1876 ttagaaggatcacctcatacctcctggcaaccatcgacacattccgcagaatattgggca 1935 Query: 1935 tctctgagtccgggttcgagctgacggtgaaggtggacgagtcgcaggctatggagaggt 1994 |||||||||| || ||| | ||||| |||||||| || | |||||| ||||||||| Sbjct: 1936 tctctgagtctggattcaacctgacagtgaaggtcactgacttgcaggccttggagaggt 1995 Query: 1995 acaagaagggg 2005 ||||||||||| Sbjct: 1996 acaagaagggg 2006
>dbj|AK120054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L05, full insert sequence Length = 2508 Score = 959 bits (484), Expect = 0.0 Identities = 1093/1295 (84%), Gaps = 2/1295 (0%) Strand = Plus / Plus Query: 713 tgacagatcgcgtgaactcagtagtacattcaggcaagattcccgaggttccagaatgca 772 |||||||||| ||||||||||||||| ||||||| | ||| |||||||||||| |||| Sbjct: 874 tgacagatcgtgtgaactcagtagtaaattcaggtaggatccccgaggttccacgatgcc 933 Query: 773 accgcagaggcttctctgaatggaacgagacgataacacctggagatcacccttcaatag 832 | |||||||||||| | ||||| |||| | || || | ||||||||||| |||| Sbjct: 934 attccagaggcttctcacagtggaatgagaatttcacttctagtgatcacccttctatag 993 Query: 833 tccagattctaattgatagaaacaaaagaaaggcagttgatgtagatggaaatgcattgc 892 | |||||| |||| ||||| |||||| ||||||||||||| | |||||||||||||||| Sbjct: 994 ttcagattttaatcgatagtaacaaacaaaaggcagttgatattgatggaaatgcattgc 1053 Query: 893 caaaacttgtgtatatggcgcgcgagaagagacctcaggaacaacatcacttcaaagctg 952 ||| |||||| |||||||| || ||||||| ||| ||| |||| |||||||||||||||| Sbjct: 1054 caacacttgtatatatggcacgtgagaagaaaccccagaaacagcatcacttcaaagctg 1113 Query: 953 gatcattaaatgctttgataaggatatcttcggtgataagcaacagcccagtcattctga 1012 |||| || ||||||||||||||| |||| || |||||||||||||| ||| |||| ||| Sbjct: 1114 gatctttgaatgctttgataagggtatcatcagtgataagcaacagtccaatcatcatga 1173 Query: 1013 atgttgattgtgatatgtactccaacaactcagagtccatcagagatgcattatgcttct 1072 |||||||||||||||||||||| ||||| ||||||||||||||||| ||||| || || | Sbjct: 1174 atgttgattgtgatatgtactcaaacaattcagagtccatcagagacgcattgtgttttt 1233 Query: 1073 tcctagatgaagagcaaggtcaagatatcggttttgtgcagtaccctc--aactttgaca 1130 ||||||||||||||||||| |||||||| |||||||| ||||| |||| || ||||| | Sbjct: 1234 tcctagatgaagagcaaggccaagatattggttttgtacagtatcctcagaattttgaaa 1293 Query: 1131 atgtggtgcacaatgacatctatggaaatcccatcaacgttgtcaacgagttggataacc 1190 ||||||||||||||||||||||||| | || ||||| |||||||||||||||||| | | Sbjct: 1294 atgtggtgcacaatgacatctatggccacccaatcaatgttgtcaacgagttggatcatc 1353 Query: 1191 cttgcttggatggatggggtggaatgtgttactatggtactggatgcttccatcgcagag 1250 ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1354 cttgcttggatggttggggtggaatgtgttactatggcactggatgcttccatcggagag 1413 Query: 1251 aggccctctctggacaaatatatagtaaagattacaaggaagattgggctaaaggagtgg 1310 ||||||| | ||||| ||| |||||| |||| || |||||||||||| ||| | || | Sbjct: 1414 aggccctatgtggacgaatctatagtcaagaatataaggaagattggactagggtagcag 1473 Query: 1311 ggatagcagaaaatgcagatgaactggaagacacgtcaaagtctctggtgacatgcacgt 1370 ||| | ||||| |||| |||| ||||||| | | | ||| || ||||| ||||| | Sbjct: 1474 ggagaacagaagatgctaatgagttggaagaaatgggcaggtcacttgtgacttgcacat 1533 Query: 1371 atgagcataacaccccgtggggcattgagaaaggagtcagatatgggtgcccactggagg 1430 |||||||||||||| ||||| |||||||| || || || ||||||||||||||||||| Sbjct: 1534 atgagcataacaccatctggggaattgagaagggggttaggtatgggtgcccactggagg 1593 Query: 1431 atgttattacaggattgcaaatccaatgccgtgggtggagatcggtatactacaacccgt 1490 |||| | ||||||||| ||||||||||||||||| |||||||| || ||||||||||| Sbjct: 1594 atgtaactacaggattacaaatccaatgccgtggatggagatcagtgtactacaacccca 1653 Query: 1491 ccagaaagggcttcttaggcaaggcgcctacctcactaggccagatcctggttcagcaca 1550 |||||||| |||||||||| | | || ||||||||||||||||||||||| | | ||| Sbjct: 1654 aaagaaagggattcttaggcatgacacccacctcactaggccagatcctggtcctgtaca 1713 Query: 1551 agagatggtcagaagggttcctccaaatatccctctccaattacagcccctttttattag 1610 |||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 1714 agagatggacagaagggttcctccaaatatccctctcacggtacagccccttcttattag 1773 Query: 1611 gccatggtaagatcaagctggggcttcaaatgggttactcggtctgtggcttctgggccc 1670 | ||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||||||| Sbjct: 1774 gtcatgggaagatcaagctgggtcttcaaatgggctactctgtctgcggcttctgggccg 1833 Query: 1671 tgaacagcttccccaccttttactatgtcatcatcccttcactttgcttcctcagtggca 1730 ||||||||||||||||||| |||||||||| || ||||| ||||||||||||| ||||| Sbjct: 1834 tgaacagcttccccaccttgtactatgtcacaattccttctctttgcttcctcaatggca 1893 Query: 1731 tctctgttttccctgagataaccagcccttggtgcattccattcatatacgtcgtggtag 1790 |||| | || ||||||| ||| ||||| |||| ||| || || ||||| |||| | Sbjct: 1894 tctccctctttcctgagaaaactagcccctggttcataccctttgcgtacgttatggtgg 1953 Query: 1791 ctgcatactcctggagcctaatggagtcgctgcaatgtggtgacactgctgtggagtggt 1850 | ||||||||||| ||| || ||||| |||||||||||||||| ||| |||||||||| Sbjct: 1954 ccgcatactcctgcagcttagcagagtcactgcaatgtggtgacagtgcagtggagtggt 2013 Query: 1851 ggaacgcacaaaggatgtggctcatgagaaggaccacctcctacctcctggcggccatcg 1910 |||| ||||| |||||||||||||| ||||||| |||||| ||||||||||| |||||| Sbjct: 2014 ggaatgcacagaggatgtggctcattagaaggatcacctcatacctcctggcaaccatcg 2073 Query: 1911 acacgattgggggaatgctgggcatctctgagtccgggttcgagctgacggtgaaggtgg 1970 |||| | | |||| |||||||||||||||| || ||| | ||||| |||||||| Sbjct: 2074 acacattccgcagaatattgggcatctctgagtctggattcaacctgacagtgaaggtca 2133 Query: 1971 acgagtcgcaggctatggagaggtacaagaagggg 2005 || | |||||| |||||||||||||||||||| Sbjct: 2134 ctgacttgcaggccttggagaggtacaagaagggg 2168
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 347 bits (175), Expect = 1e-91 Identities = 286/323 (88%) Strand = Plus / Plus Query: 1412 tatgggtgcccactggaggatgttattacaggattgcaaatccaatgccgtgggtggaga 1471 ||||||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||| Sbjct: 30171284 tatgggtgcccactggaggatgtaactacaggattacaaatccaatgccgtggatggaga 30171343 Query: 1472 tcggtatactacaacccgtccagaaagggcttcttaggcaaggcgcctacctcactaggc 1531 || || ||||||||||| |||||||| |||||||||| | | || |||||||||||| Sbjct: 30171344 tcagtgtactacaaccccaaaagaaagggattcttaggcatgacacccacctcactaggc 30171403 Query: 1532 cagatcctggttcagcacaagagatggtcagaagggttcctccaaatatccctctccaat 1591 ||||||||||| | | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 30171404 cagatcctggtcctgtacaagagatggacagaagggttcctccaaatatccctctcacgg 30171463 Query: 1592 tacagcccctttttattaggccatggtaagatcaagctggggcttcaaatgggttactcg 1651 ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 30171464 tacagccccttcttattaggtcatgggaagatcaagctgggtcttcaaatgggctactct 30171523 Query: 1652 gtctgtggcttctgggccctgaacagcttccccaccttttactatgtcatcatcccttca 1711 ||||| |||||||||||| ||||||||||||||||||| |||||||||| || ||||| Sbjct: 30171524 gtctgcggcttctgggccgtgaacagcttccccaccttgtactatgtcacaattccttct 30171583 Query: 1712 ctttgcttcctcagtggcatctc 1734 ||||||||||||| ||||||||| Sbjct: 30171584 ctttgcttcctcaatggcatctc 30171606 Score = 212 bits (107), Expect = 5e-51 Identities = 188/214 (87%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 969 gataaggatatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgatat 1028 ||||||| |||| || |||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 30170588 gataagggtatcatcagtgataagcaacagtccaatcatcatgaatgttgattgtgatat 30170647 Query: 1029 gtactccaacaactcagagtccatcagagatgcattatgcttcttcctagatgaagagca 1088 |||||| ||||| ||||||||||||||||| ||||| || || ||||||||||||||||| Sbjct: 30170648 gtactcaaacaattcagagtccatcagagacgcattgtgttttttcctagatgaagagca 30170707 Query: 1089 aggtcaagatatcggttttgtgcagtaccctc--aactttgacaatgtggtgcacaatga 1146 ||| |||||||| |||||||| ||||| |||| || ||||| ||||||||||||||||| Sbjct: 30170708 aggccaagatattggttttgtacagtatcctcagaattttgaaaatgtggtgcacaatga 30170767 Query: 1147 catctatggaaatcccatcaacgttgtcaacgag 1180 ||||||||| | || ||||| |||||||||||| Sbjct: 30170768 catctatggccacccaatcaatgttgtcaacgag 30170801 Score = 210 bits (106), Expect = 2e-50 Identities = 208/242 (85%) Strand = Plus / Plus Query: 400 gtggacatatttgtgtgtacagcggacccagctcttgaaccacccatgcttgtcatctcc 459 |||||||| ||||| ||||||||||| ||| | || ||||| ||||||||||||||| Sbjct: 30167962 gtggacatttttgtctgtacagcggatccaacagcagagccaccgatgcttgtcatctcc 30168021 Query: 460 acggttctgtctgtcatggcttatgactacccgccagagaagctaaacatctatttgtct 519 || ||| |||||||||||||||||||||||| ||| |||||||| |||||||| || ||| Sbjct: 30168022 actgttttgtctgtcatggcttatgactacctgcctgagaagctgaacatctacttatct 30168081 Query: 520 gatgatgctggttccgcgataacattctacgctcttcatgaggcatctgagtttgcaaag 579 |||||||||||||| | |||||||||||| ||| |||||||| |||||||||||| Sbjct: 30168082 gatgatgctggttcggttttaacattctacgttctatgcgaggcatccgagtttgcaaag 30168141 Query: 580 cactggattccattttgcaaaaattacaaggtggagcccaggtccccagctgcctacttt 639 || ||||||||||||||||| || ||||||||||| ||||| || |||||||| |||||| Sbjct: 30168142 cattggattccattttgcaagaagtacaaggtggaacccagatcaccagctgcttacttt 30168201 Query: 640 gc 641 || Sbjct: 30168202 gc 30168203 Score = 141 bits (71), Expect = 1e-29 Identities = 107/119 (89%) Strand = Plus / Plus Query: 1179 agttggataacccttgcttggatggatggggtggaatgtgttactatggtactggatgct 1238 |||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 30170899 agttggatcatccttgcttggatggttggggtggaatgtgttactatggcactggatgct 30170958 Query: 1239 tccatcgcagagaggccctctctggacaaatatatagtaaagattacaaggaagattgg 1297 ||||||| ||||||||||| | ||||| ||| |||||| |||| || |||||||||||| Sbjct: 30170959 tccatcggagagaggccctatgtggacgaatctatagtcaagaatataaggaagattgg 30171017 Score = 137 bits (69), Expect = 2e-28 Identities = 177/213 (83%) Strand = Plus / Plus Query: 1793 gcatactcctggagcctaatggagtcgctgcaatgtggtgacactgctgtggagtggtgg 1852 ||||||||||| ||| || ||||| |||||||||||||||| ||| |||||||||||| Sbjct: 30171756 gcatactcctgcagcttagcagagtcactgcaatgtggtgacagtgcagtggagtggtgg 30171815 Query: 1853 aacgcacaaaggatgtggctcatgagaaggaccacctcctacctcctggcggccatcgac 1912 || ||||| |||||||||||||| ||||||| |||||| ||||||||||| |||||||| Sbjct: 30171816 aatgcacagaggatgtggctcattagaaggatcacctcatacctcctggcaaccatcgac 30171875 Query: 1913 acgattgggggaatgctgggcatctctgagtccgggttcgagctgacggtgaaggtggac 1972 || | | |||| |||||||||||||||| || ||| | ||||| |||||||| Sbjct: 30171876 acattccgcagaatattgggcatctctgagtctggattcaacctgacagtgaaggtcact 30171935 Query: 1973 gagtcgcaggctatggagaggtacaagaagggg 2005 || | |||||| |||||||||||||||||||| Sbjct: 30171936 gacttgcaggccttggagaggtacaagaagggg 30171968 Score = 131 bits (66), Expect = 1e-26 Identities = 117/134 (87%) Strand = Plus / Plus Query: 836 agattctaattgatagaaacaaaagaaaggcagttgatgtagatggaaatgcattgccaa 895 ||||| |||| ||||| |||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 30170350 agattttaatcgatagtaacaaacaaaaggcagttgatattgatggaaatgcattgccaa 30170409 Query: 896 aacttgtgtatatggcgcgcgagaagagacctcaggaacaacatcacttcaaagctggat 955 |||||| |||||||| || ||||||| ||| ||| |||| ||||||||||||||||||| Sbjct: 30170410 cacttgtatatatggcacgtgagaagaaaccccagaaacagcatcacttcaaagctggat 30170469 Query: 956 cattaaatgctttg 969 | || ||||||||| Sbjct: 30170470 ctttgaatgctttg 30170483 Score = 83.8 bits (42), Expect = 3e-12 Identities = 93/110 (84%) Strand = Plus / Plus Query: 257 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 316 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 30167605 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 30167664 Query: 317 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctc 366 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| Sbjct: 30167665 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctc 30167714 Score = 65.9 bits (33), Expect = 7e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 713 tgacagatcgcgtgaactcagtagtacattcaggcaagattcccgaggttcca 765 |||||||||| ||||||||||||||| ||||||| | ||| |||||||||||| Sbjct: 30169989 tgacagatcgtgtgaactcagtagtaaattcaggtaggatccccgaggttcca 30170041
>gb|AF432501.1|AF432501 Oryza sativa cellulose synthase-like protein OsCslE2 gene, complete cds Length = 6037 Score = 347 bits (175), Expect = 1e-91 Identities = 286/323 (88%) Strand = Plus / Plus Query: 1412 tatgggtgcccactggaggatgttattacaggattgcaaatccaatgccgtgggtggaga 1471 ||||||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||| Sbjct: 4593 tatgggtgcccactggaggatgtaactacaggattacaaatccaatgccgtggatggaga 4652 Query: 1472 tcggtatactacaacccgtccagaaagggcttcttaggcaaggcgcctacctcactaggc 1531 || || ||||||||||| |||||||| |||||||||| | | || |||||||||||| Sbjct: 4653 tcagtgtactacaaccccaaaagaaagggattcttaggcatgacacccacctcactaggc 4712 Query: 1532 cagatcctggttcagcacaagagatggtcagaagggttcctccaaatatccctctccaat 1591 ||||||||||| | | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 4713 cagatcctggtcctgtacaagagatggacagaagggttcctccaaatatccctctcacgg 4772 Query: 1592 tacagcccctttttattaggccatggtaagatcaagctggggcttcaaatgggttactcg 1651 ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 4773 tacagccccttcttattaggtcatgggaagatcaagctgggtcttcaaatgggctactct 4832 Query: 1652 gtctgtggcttctgggccctgaacagcttccccaccttttactatgtcatcatcccttca 1711 ||||| |||||||||||| ||||||||||||||||||| |||||||||| || ||||| Sbjct: 4833 gtctgcggcttctgggccgtgaacagcttccccaccttgtactatgtcacaattccttct 4892 Query: 1712 ctttgcttcctcagtggcatctc 1734 ||||||||||||| ||||||||| Sbjct: 4893 ctttgcttcctcaatggcatctc 4915 Score = 212 bits (107), Expect = 5e-51 Identities = 188/214 (87%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 969 gataaggatatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgatat 1028 ||||||| |||| || |||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 3897 gataagggtatcatcagtgataagcaacagtccaatcatcatgaatgttgattgtgatat 3956 Query: 1029 gtactccaacaactcagagtccatcagagatgcattatgcttcttcctagatgaagagca 1088 |||||| ||||| ||||||||||||||||| ||||| || || ||||||||||||||||| Sbjct: 3957 gtactcaaacaattcagagtccatcagagacgcattgtgttttttcctagatgaagagca 4016 Query: 1089 aggtcaagatatcggttttgtgcagtaccctc--aactttgacaatgtggtgcacaatga 1146 ||| |||||||| |||||||| ||||| |||| || ||||| ||||||||||||||||| Sbjct: 4017 aggccaagatattggttttgtacagtatcctcagaattttgaaaatgtggtgcacaatga 4076 Query: 1147 catctatggaaatcccatcaacgttgtcaacgag 1180 ||||||||| | || ||||| |||||||||||| Sbjct: 4077 catctatggccacccaatcaatgttgtcaacgag 4110 Score = 210 bits (106), Expect = 2e-50 Identities = 208/242 (85%) Strand = Plus / Plus Query: 400 gtggacatatttgtgtgtacagcggacccagctcttgaaccacccatgcttgtcatctcc 459 |||||||| ||||| ||||||||||| ||| | || ||||| ||||||||||||||| Sbjct: 1271 gtggacatttttgtctgtacagcggatccaacagcagagccaccgatgcttgtcatctcc 1330 Query: 460 acggttctgtctgtcatggcttatgactacccgccagagaagctaaacatctatttgtct 519 || ||| |||||||||||||||||||||||| ||| |||||||| |||||||| || ||| Sbjct: 1331 actgttttgtctgtcatggcttatgactacctgcctgagaagctgaacatctacttatct 1390 Query: 520 gatgatgctggttccgcgataacattctacgctcttcatgaggcatctgagtttgcaaag 579 |||||||||||||| | |||||||||||| ||| |||||||| |||||||||||| Sbjct: 1391 gatgatgctggttcggttttaacattctacgttctatgcgaggcatccgagtttgcaaag 1450 Query: 580 cactggattccattttgcaaaaattacaaggtggagcccaggtccccagctgcctacttt 639 || ||||||||||||||||| || ||||||||||| ||||| || |||||||| |||||| Sbjct: 1451 cattggattccattttgcaagaagtacaaggtggaacccagatcaccagctgcttacttt 1510 Query: 640 gc 641 || Sbjct: 1511 gc 1512 Score = 141 bits (71), Expect = 1e-29 Identities = 107/119 (89%) Strand = Plus / Plus Query: 1179 agttggataacccttgcttggatggatggggtggaatgtgttactatggtactggatgct 1238 |||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 4208 agttggatcatccttgcttggatggttggggtggaatgtgttactatggcactggatgct 4267 Query: 1239 tccatcgcagagaggccctctctggacaaatatatagtaaagattacaaggaagattgg 1297 ||||||| ||||||||||| | ||||| ||| |||||| |||| || |||||||||||| Sbjct: 4268 tccatcggagagaggccctatgtggacgaatctatagtcaagaatataaggaagattgg 4326 Score = 137 bits (69), Expect = 2e-28 Identities = 177/213 (83%) Strand = Plus / Plus Query: 1793 gcatactcctggagcctaatggagtcgctgcaatgtggtgacactgctgtggagtggtgg 1852 ||||||||||| ||| || ||||| |||||||||||||||| ||| |||||||||||| Sbjct: 5065 gcatactcctgcagcttagcagagtcactgcaatgtggtgacagtgcagtggagtggtgg 5124 Query: 1853 aacgcacaaaggatgtggctcatgagaaggaccacctcctacctcctggcggccatcgac 1912 || ||||| |||||||||||||| ||||||| |||||| ||||||||||| |||||||| Sbjct: 5125 aatgcacagaggatgtggctcattagaaggatcacctcatacctcctggcaaccatcgac 5184 Query: 1913 acgattgggggaatgctgggcatctctgagtccgggttcgagctgacggtgaaggtggac 1972 || | | |||| |||||||||||||||| || ||| | ||||| |||||||| Sbjct: 5185 acattccgcagaatattgggcatctctgagtctggattcaacctgacagtgaaggtcact 5244 Query: 1973 gagtcgcaggctatggagaggtacaagaagggg 2005 || | |||||| |||||||||||||||||||| Sbjct: 5245 gacttgcaggccttggagaggtacaagaagggg 5277 Score = 131 bits (66), Expect = 1e-26 Identities = 117/134 (87%) Strand = Plus / Plus Query: 836 agattctaattgatagaaacaaaagaaaggcagttgatgtagatggaaatgcattgccaa 895 ||||| |||| ||||| |||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 3659 agattttaatcgatagtaacaaacaaaaggcagttgatattgatggaaatgcattgccaa 3718 Query: 896 aacttgtgtatatggcgcgcgagaagagacctcaggaacaacatcacttcaaagctggat 955 |||||| |||||||| || ||||||| ||| ||| |||| ||||||||||||||||||| Sbjct: 3719 cacttgtatatatggcacgtgagaagaaaccccagaaacagcatcacttcaaagctggat 3778 Query: 956 cattaaatgctttg 969 | || ||||||||| Sbjct: 3779 ctttgaatgctttg 3792 Score = 83.8 bits (42), Expect = 3e-12 Identities = 93/110 (84%) Strand = Plus / Plus Query: 257 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 316 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 914 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 973 Query: 317 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctc 366 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| Sbjct: 974 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctc 1023 Score = 65.9 bits (33), Expect = 7e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 713 tgacagatcgcgtgaactcagtagtacattcaggcaagattcccgaggttcca 765 |||||||||| ||||||||||||||| ||||||| | ||| |||||||||||| Sbjct: 3298 tgacagatcgtgtgaactcagtagtaaattcaggtaggatccccgaggttcca 3350
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07 Length = 93240 Score = 347 bits (175), Expect = 1e-91 Identities = 286/323 (88%) Strand = Plus / Plus Query: 1412 tatgggtgcccactggaggatgttattacaggattgcaaatccaatgccgtgggtggaga 1471 ||||||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||| Sbjct: 43988 tatgggtgcccactggaggatgtaactacaggattacaaatccaatgccgtggatggaga 44047 Query: 1472 tcggtatactacaacccgtccagaaagggcttcttaggcaaggcgcctacctcactaggc 1531 || || ||||||||||| |||||||| |||||||||| | | || |||||||||||| Sbjct: 44048 tcagtgtactacaaccccaaaagaaagggattcttaggcatgacacccacctcactaggc 44107 Query: 1532 cagatcctggttcagcacaagagatggtcagaagggttcctccaaatatccctctccaat 1591 ||||||||||| | | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 44108 cagatcctggtcctgtacaagagatggacagaagggttcctccaaatatccctctcacgg 44167 Query: 1592 tacagcccctttttattaggccatggtaagatcaagctggggcttcaaatgggttactcg 1651 ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 44168 tacagccccttcttattaggtcatgggaagatcaagctgggtcttcaaatgggctactct 44227 Query: 1652 gtctgtggcttctgggccctgaacagcttccccaccttttactatgtcatcatcccttca 1711 ||||| |||||||||||| ||||||||||||||||||| |||||||||| || ||||| Sbjct: 44228 gtctgcggcttctgggccgtgaacagcttccccaccttgtactatgtcacaattccttct 44287 Query: 1712 ctttgcttcctcagtggcatctc 1734 ||||||||||||| ||||||||| Sbjct: 44288 ctttgcttcctcaatggcatctc 44310 Score = 212 bits (107), Expect = 5e-51 Identities = 188/214 (87%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 969 gataaggatatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgatat 1028 ||||||| |||| || |||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 43292 gataagggtatcatcagtgataagcaacagtccaatcatcatgaatgttgattgtgatat 43351 Query: 1029 gtactccaacaactcagagtccatcagagatgcattatgcttcttcctagatgaagagca 1088 |||||| ||||| ||||||||||||||||| ||||| || || ||||||||||||||||| Sbjct: 43352 gtactcaaacaattcagagtccatcagagacgcattgtgttttttcctagatgaagagca 43411 Query: 1089 aggtcaagatatcggttttgtgcagtaccctc--aactttgacaatgtggtgcacaatga 1146 ||| |||||||| |||||||| ||||| |||| || ||||| ||||||||||||||||| Sbjct: 43412 aggccaagatattggttttgtacagtatcctcagaattttgaaaatgtggtgcacaatga 43471 Query: 1147 catctatggaaatcccatcaacgttgtcaacgag 1180 ||||||||| | || ||||| |||||||||||| Sbjct: 43472 catctatggccacccaatcaatgttgtcaacgag 43505 Score = 210 bits (106), Expect = 2e-50 Identities = 208/242 (85%) Strand = Plus / Plus Query: 400 gtggacatatttgtgtgtacagcggacccagctcttgaaccacccatgcttgtcatctcc 459 |||||||| ||||| ||||||||||| ||| | || ||||| ||||||||||||||| Sbjct: 40666 gtggacatttttgtctgtacagcggatccaacagcagagccaccgatgcttgtcatctcc 40725 Query: 460 acggttctgtctgtcatggcttatgactacccgccagagaagctaaacatctatttgtct 519 || ||| |||||||||||||||||||||||| ||| |||||||| |||||||| || ||| Sbjct: 40726 actgttttgtctgtcatggcttatgactacctgcctgagaagctgaacatctacttatct 40785 Query: 520 gatgatgctggttccgcgataacattctacgctcttcatgaggcatctgagtttgcaaag 579 |||||||||||||| | |||||||||||| ||| |||||||| |||||||||||| Sbjct: 40786 gatgatgctggttcggttttaacattctacgttctatgcgaggcatccgagtttgcaaag 40845 Query: 580 cactggattccattttgcaaaaattacaaggtggagcccaggtccccagctgcctacttt 639 || ||||||||||||||||| || ||||||||||| ||||| || |||||||| |||||| Sbjct: 40846 cattggattccattttgcaagaagtacaaggtggaacccagatcaccagctgcttacttt 40905 Query: 640 gc 641 || Sbjct: 40906 gc 40907 Score = 141 bits (71), Expect = 1e-29 Identities = 107/119 (89%) Strand = Plus / Plus Query: 1179 agttggataacccttgcttggatggatggggtggaatgtgttactatggtactggatgct 1238 |||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 43603 agttggatcatccttgcttggatggttggggtggaatgtgttactatggcactggatgct 43662 Query: 1239 tccatcgcagagaggccctctctggacaaatatatagtaaagattacaaggaagattgg 1297 ||||||| ||||||||||| | ||||| ||| |||||| |||| || |||||||||||| Sbjct: 43663 tccatcggagagaggccctatgtggacgaatctatagtcaagaatataaggaagattgg 43721 Score = 137 bits (69), Expect = 2e-28 Identities = 177/213 (83%) Strand = Plus / Plus Query: 1793 gcatactcctggagcctaatggagtcgctgcaatgtggtgacactgctgtggagtggtgg 1852 ||||||||||| ||| || ||||| |||||||||||||||| ||| |||||||||||| Sbjct: 44460 gcatactcctgcagcttagcagagtcactgcaatgtggtgacagtgcagtggagtggtgg 44519 Query: 1853 aacgcacaaaggatgtggctcatgagaaggaccacctcctacctcctggcggccatcgac 1912 || ||||| |||||||||||||| ||||||| |||||| ||||||||||| |||||||| Sbjct: 44520 aatgcacagaggatgtggctcattagaaggatcacctcatacctcctggcaaccatcgac 44579 Query: 1913 acgattgggggaatgctgggcatctctgagtccgggttcgagctgacggtgaaggtggac 1972 || | | |||| |||||||||||||||| || ||| | ||||| |||||||| Sbjct: 44580 acattccgcagaatattgggcatctctgagtctggattcaacctgacagtgaaggtcact 44639 Query: 1973 gagtcgcaggctatggagaggtacaagaagggg 2005 || | |||||| |||||||||||||||||||| Sbjct: 44640 gacttgcaggccttggagaggtacaagaagggg 44672 Score = 131 bits (66), Expect = 1e-26 Identities = 117/134 (87%) Strand = Plus / Plus Query: 836 agattctaattgatagaaacaaaagaaaggcagttgatgtagatggaaatgcattgccaa 895 ||||| |||| ||||| |||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 43054 agattttaatcgatagtaacaaacaaaaggcagttgatattgatggaaatgcattgccaa 43113 Query: 896 aacttgtgtatatggcgcgcgagaagagacctcaggaacaacatcacttcaaagctggat 955 |||||| |||||||| || ||||||| ||| ||| |||| ||||||||||||||||||| Sbjct: 43114 cacttgtatatatggcacgtgagaagaaaccccagaaacagcatcacttcaaagctggat 43173 Query: 956 cattaaatgctttg 969 | || ||||||||| Sbjct: 43174 ctttgaatgctttg 43187 Score = 83.8 bits (42), Expect = 3e-12 Identities = 93/110 (84%) Strand = Plus / Plus Query: 257 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 316 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 40309 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 40368 Query: 317 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctc 366 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| Sbjct: 40369 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctc 40418 Score = 65.9 bits (33), Expect = 7e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 713 tgacagatcgcgtgaactcagtagtacattcaggcaagattcccgaggttcca 765 |||||||||| ||||||||||||||| ||||||| | ||| |||||||||||| Sbjct: 42693 tgacagatcgtgtgaactcagtagtaaattcaggtaggatccccgaggttcca 42745
>dbj|AK107881.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-D06, full insert sequence Length = 819 Score = 248 bits (125), Expect = 8e-62 Identities = 320/385 (83%) Strand = Plus / Plus Query: 257 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 316 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 247 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 306 Query: 317 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctctcggccagct 376 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| | |||| Sbjct: 307 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctcgctcaaagct 366 Query: 377 atgacgatgaccagctccccggcgtggacatatttgtgtgtacagcggacccagctcttg 436 | || ||| |||| ||| | |||||||| ||||| ||||||||||| ||| | | Sbjct: 367 acagtgaagacgagcttcccagtgtggacatttttgtctgtacagcggatccaacagcag 426 Query: 437 aaccacccatgcttgtcatctccacggttctgtctgtcatggcttatgactacccgccag 496 | ||||| ||||||||||||||||| ||| |||||||||||||||||||||||| ||| | Sbjct: 427 agccaccgatgcttgtcatctccactgttttgtctgtcatggcttatgactacctgcctg 486 Query: 497 agaagctaaacatctatttgtctgatgatgctggttccgcgataacattctacgctcttc 556 ||||||| |||||||| || ||||||||||||||||| | |||||||||||| ||| Sbjct: 487 agaagctgaacatctacttatctgatgatgctggttcggttttaacattctacgttctat 546 Query: 557 atgaggcatctgagtttgcaaagcactggattccattttgcaaaaattacaaggtggagc 616 |||||||| |||||||||||||| ||||||||||||||||| || ||||||||||| | Sbjct: 547 gcgaggcatccgagtttgcaaagcattggattccattttgcaagaagtacaaggtggaac 606 Query: 617 ccaggtccccagctgcctactttgc 641 |||| || |||||||| |||||||| Sbjct: 607 ccagatcaccagctgcttactttgc 631
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 210 bits (106), Expect = 2e-50 Identities = 208/242 (85%) Strand = Plus / Plus Query: 400 gtggacatatttgtgtgtacagcggacccagctcttgaaccacccatgcttgtcatctcc 459 |||||||| ||||| ||||||||||| ||| | || ||||| ||||||||||||||| Sbjct: 147559 gtggacatttttgtctgtacagcggatccaacagcagagccaccgatgcttgtcatctcc 147618 Query: 460 acggttctgtctgtcatggcttatgactacccgccagagaagctaaacatctatttgtct 519 || ||| |||||||||||||||||||||||| ||| |||||||| |||||||| || ||| Sbjct: 147619 actgttttgtctgtcatggcttatgactacctgcctgagaagctgaacatctacttatct 147678 Query: 520 gatgatgctggttccgcgataacattctacgctcttcatgaggcatctgagtttgcaaag 579 |||||||||||||| | |||||||||||| ||| |||||||| |||||||||||| Sbjct: 147679 gatgatgctggttcggttttaacattctacgttctatgcgaggcatccgagtttgcaaag 147738 Query: 580 cactggattccattttgcaaaaattacaaggtggagcccaggtccccagctgcctacttt 639 || ||||||||||||||||| || ||||||||||| ||||| || |||||||| |||||| Sbjct: 147739 cattggattccattttgcaagaagtacaaggtggaacccagatcaccagctgcttacttt 147798 Query: 640 gc 641 || Sbjct: 147799 gc 147800 Score = 83.8 bits (42), Expect = 3e-12 Identities = 93/110 (84%) Strand = Plus / Plus Query: 257 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 316 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 147202 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 147261 Query: 317 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctc 366 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| Sbjct: 147262 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctc 147311
>ref|NM_001070004.1| Oryza sativa (japonica cultivar-group) Os09g0478100 (Os09g0478100) mRNA, complete cds Length = 2418 Score = 115 bits (58), Expect = 8e-22 Identities = 148/178 (83%) Strand = Plus / Plus Query: 908 tggcgcgcgagaagagacctcaggaacaacatcacttcaaagctggatcattaaatgctt 967 |||||||||||||||| |||||| | || ||| ||||||||||||| |||| || |||| Sbjct: 979 tggcgcgcgagaagaggcctcagtaccaccataacttcaaagctggggcattgaacgctt 1038 Query: 968 tgataaggatatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgata 1027 |||||||| |||| || |||||||| ||||||| || || |||| || || ||||||| Sbjct: 1039 tgataagggtatcatcagtgataagtgacagccctgttatcttgaacgtggactgtgata 1098 Query: 1028 tgtactccaacaactcagagtccatcagagatgcattatgcttcttcctagatgaaga 1085 |||| |||||||| || || ||||||||||| |||||||||||||| |||||||| Sbjct: 1099 tgtattccaacaatagtgattcaatcagagatgcgttatgcttcttcctcgatgaaga 1156
>dbj|AK103810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A19, full insert sequence Length = 2127 Score = 115 bits (58), Expect = 8e-22 Identities = 148/178 (83%) Strand = Plus / Plus Query: 908 tggcgcgcgagaagagacctcaggaacaacatcacttcaaagctggatcattaaatgctt 967 |||||||||||||||| |||||| | || ||| ||||||||||||| |||| || |||| Sbjct: 648 tggcgcgcgagaagaggcctcagtaccaccataacttcaaagctggggcattgaacgctt 707 Query: 968 tgataaggatatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgata 1027 |||||||| |||| || |||||||| ||||||| || || |||| || || ||||||| Sbjct: 708 tgataagggtatcatcagtgataagtgacagccctgttatcttgaacgtggactgtgata 767 Query: 1028 tgtactccaacaactcagagtccatcagagatgcattatgcttcttcctagatgaaga 1085 |||| |||||||| || || ||||||||||| |||||||||||||| |||||||| Sbjct: 768 tgtattccaacaatagtgattcaatcagagatgcgttatgcttcttcctcgatgaaga 825
>dbj|AK102766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107E04, full insert sequence Length = 2422 Score = 107 bits (54), Expect = 2e-19 Identities = 147/178 (82%) Strand = Plus / Plus Query: 908 tggcgcgcgagaagagacctcaggaacaacatcacttcaaagctggatcattaaatgctt 967 |||||||||||||||| |||||| | || ||| ||||||||||||| |||| || |||| Sbjct: 981 tggcgcgcgagaagaggcctcagtaccaccataacttcaaagctggggcattgaacgctt 1040 Query: 968 tgataaggatatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgata 1027 |||| ||| |||| || |||||||| ||||||| || || |||| || || ||||||| Sbjct: 1041 tgatgagggtatcatcagtgataagtgacagccctgttatcttgaacgtggactgtgata 1100 Query: 1028 tgtactccaacaactcagagtccatcagagatgcattatgcttcttcctagatgaaga 1085 |||| |||||||| || || ||||||||||| |||||||||||||| |||||||| Sbjct: 1101 tgtattccaacaatagtgattcaatcagagatgcgttatgcttcttcctcgatgaaga 1158
>dbj|AK242585.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090010M20, full insert sequence Length = 3346 Score = 85.7 bits (43), Expect = 7e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 907 atggcgcgcgagaagagacctcaggaacaacatcacttcaaagctggatcattaaatgct 966 ||||||||||||||||| |||||| | || ||| |||||||||| || |||| || ||| Sbjct: 2012 atggcgcgcgagaagagccctcagtatcaccataacttcaaagccggggcattgaacgct 2071 Query: 967 ttgataaggatatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgat 1026 ||||||||| |||| | ||||||| ||||||| || || ||||||| || ||||| Sbjct: 2072 ttgataagggtatcagcactgataagtgacagccctgttatcttgaatgtggactgtgac 2131 Query: 1027 atgtactccaacaactcagagtccatcagagatgcattatgcttcttcctagatgaaga 1085 ||||| |||||||| || || ||||||||||| || ||||||||||| |||||||| Sbjct: 2132 atgtattccaacaatagtgattcaatcagagatgcgttgtgcttcttccttgatgaaga 2190 Score = 46.1 bits (23), Expect = 0.61 Identities = 62/75 (82%) Strand = Plus / Plus Query: 283 gagctctggttcggcctctactgggtcctcaccctctccgtgcgctggaacccggtccgc 342 ||||||||||||| | ||||||||||| |||| | ||||| || ||| ||| |||||| Sbjct: 1391 gagctctggttcgccgtctactgggtcatcacgcagtccgtccggtggtgccccgtccgc 1450 Query: 343 cgcaccaccttcaag 357 ||| |||||||||| Sbjct: 1451 cgccgcaccttcaag 1465
>ref|NM_001070005.1| Oryza sativa (japonica cultivar-group) Os09g0478200 (Os09g0478200) mRNA, complete cds Length = 1740 Score = 85.7 bits (43), Expect = 7e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 907 atggcgcgcgagaagagacctcaggaacaacatcacttcaaagctggatcattaaatgct 966 ||||||||||||||||| |||||| | || ||| |||||||||| || |||| || ||| Sbjct: 805 atggcgcgcgagaagagccctcagtatcaccataacttcaaagccggggcattgaacgct 864 Query: 967 ttgataaggatatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgat 1026 ||||||||| |||| | ||||||| ||||||| || || ||||||| || ||||| Sbjct: 865 ttgataagggtatcagcactgataagtgacagccctgttatcttgaatgtggactgtgac 924 Query: 1027 atgtactccaacaactcagagtccatcagagatgcattatgcttcttcctagatgaaga 1085 ||||| |||||||| || || ||||||||||| || ||||||||||| |||||||| Sbjct: 925 atgtattccaacaatagtgattcaatcagagatgcgttgtgcttcttccttgatgaaga 983 Score = 46.1 bits (23), Expect = 0.61 Identities = 62/75 (82%) Strand = Plus / Plus Query: 283 gagctctggttcggcctctactgggtcctcaccctctccgtgcgctggaacccggtccgc 342 ||||||||||||| | ||||||||||| |||| | ||||| || ||| ||| |||||| Sbjct: 184 gagctctggttcgccgtctactgggtcatcacgcagtccgtccggtggtgccccgtccgc 243 Query: 343 cgcaccaccttcaag 357 ||| |||||||||| Sbjct: 244 cgccgcaccttcaag 258
>dbj|AK111344.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F12, full insert sequence Length = 513 Score = 83.8 bits (42), Expect = 3e-12 Identities = 93/110 (84%) Strand = Plus / Plus Query: 257 gggcggggctcgggctgctcgtggccgagctctggttcggcctctactgggtcctcaccc 316 ||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||||| || | Sbjct: 247 gggcgtggctcgggatgctcgcggcggagctctggttcggcttctactgggtcctgacgc 306 Query: 317 tctccgtgcgctggaacccggtccgccgcaccaccttcaaggaccgcctc 366 | |||||||| ||| ||| ||| |||| ||||||||| ||||||||| Sbjct: 307 tgtccgtgcggtggtgccccgtctaccgccgcaccttcaaagaccgcctc 356
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 65.9 bits (33), Expect = 7e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 969 gataaggatatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgatat 1028 ||||||| |||| || |||||||| ||||||| || || |||| || || |||||||| Sbjct: 18255101 gataagggtatcatcagtgataagtgacagccctgttatcttgaacgtggactgtgatat 18255042 Query: 1029 gtactccaacaactcagagtccatcagagatgcattatgcttcttcctagatgaaga 1085 ||| |||||||| || || ||||||||||| |||||||||||||| |||||||| Sbjct: 18255041 gtattccaacaatagtgattcaatcagagatgcgttatgcttcttcctcgatgaaga 18254985 Score = 52.0 bits (26), Expect = 0.010 Identities = 41/46 (89%) Strand = Plus / Minus Query: 908 tggcgcgcgagaagagacctcaggaacaacatcacttcaaagctgg 953 |||||||||||||||| |||||| | || ||| ||||||||||||| Sbjct: 18255615 tggcgcgcgagaagaggcctcagtaccaccataacttcaaagctgg 18255570 Score = 48.1 bits (24), Expect = 0.15 Identities = 63/76 (82%) Strand = Plus / Minus Query: 1010 tgaatgttgattgtgatatgtactccaacaactcagagtccatcagagatgcattatgct 1069 ||||||| || ||||| ||||| |||||||| || || ||||||||||| || |||| Sbjct: 18262908 tgaatgtggactgtgacatgtattccaacaatagtgattcaatcagagatgcgttgtgct 18262849 Query: 1070 tcttcctagatgaaga 1085 ||||||| |||||||| Sbjct: 18262848 tcttccttgatgaaga 18262833 Score = 48.1 bits (24), Expect = 0.15 Identities = 39/44 (88%) Strand = Plus / Minus Query: 907 atggcgcgcgagaagagacctcaggaacaacatcacttcaaagc 950 ||||||||||||||||| |||||| | || ||| |||||||||| Sbjct: 18263441 atggcgcgcgagaagagccctcagtatcaccataacttcaaagc 18263398 Score = 46.1 bits (23), Expect = 0.61 Identities = 62/75 (82%) Strand = Plus / Minus Query: 283 gagctctggttcggcctctactgggtcctcaccctctccgtgcgctggaacccggtccgc 342 ||||||||||||| | ||||||||||| |||| | ||||| || ||| ||| |||||| Sbjct: 18266345 gagctctggttcgccgtctactgggtcatcacgcagtccgtccggtggtgccccgtccgc 18266286 Query: 343 cgcaccaccttcaag 357 ||| |||||||||| Sbjct: 18266285 cgccgcaccttcaag 18266271 Score = 42.1 bits (21), Expect = 9.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 570 gtttgcaaagcactggattccattttgcaaaaa 602 |||||||||||||||| | ||||| |||||||| Sbjct: 18249340 gtttgcaaagcactggctaccattctgcaaaaa 18249308
>gb|AF432500.1|AF432500 Oryza sativa cellulose synthase-like protein OsCslE1 gene, complete cds Length = 8155 Score = 65.9 bits (33), Expect = 7e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 969 gataaggatatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgatat 1028 ||||||| |||| || |||||||| ||||||| || || |||| || || |||||||| Sbjct: 5904 gataagggtatcatcagtgataagtgacagccctgttatcttgaacgtggactgtgatat 5963 Query: 1029 gtactccaacaactcagagtccatcagagatgcattatgcttcttcctagatgaaga 1085 ||| |||||||| || || ||||||||||| |||||||||||||| |||||||| Sbjct: 5964 gtattccaacaatagtgattcaatcagagatgcgttatgcttcttcctcgatgaaga 6020 Score = 52.0 bits (26), Expect = 0.010 Identities = 41/46 (89%) Strand = Plus / Plus Query: 908 tggcgcgcgagaagagacctcaggaacaacatcacttcaaagctgg 953 |||||||||||||||| |||||| | || ||| ||||||||||||| Sbjct: 5390 tggcgcgcgagaagaggcctcagtaccaccataacttcaaagctgg 5435
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 65.9 bits (33), Expect = 7e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 969 gataaggatatcttcggtgataagcaacagcccagtcattctgaatgttgattgtgatat 1028 ||||||| |||| || |||||||| ||||||| || || |||| || || |||||||| Sbjct: 103825 gataagggtatcatcagtgataagtgacagccctgttatcttgaacgtggactgtgatat 103766 Query: 1029 gtactccaacaactcagagtccatcagagatgcattatgcttcttcctagatgaaga 1085 ||| |||||||| || || ||||||||||| |||||||||||||| |||||||| Sbjct: 103765 gtattccaacaatagtgattcaatcagagatgcgttatgcttcttcctcgatgaaga 103709 Score = 52.0 bits (26), Expect = 0.010 Identities = 41/46 (89%) Strand = Plus / Minus Query: 908 tggcgcgcgagaagagacctcaggaacaacatcacttcaaagctgg 953 |||||||||||||||| |||||| | || ||| ||||||||||||| Sbjct: 104339 tggcgcgcgagaagaggcctcagtaccaccataacttcaaagctgg 104294 Score = 48.1 bits (24), Expect = 0.15 Identities = 63/76 (82%) Strand = Plus / Minus Query: 1010 tgaatgttgattgtgatatgtactccaacaactcagagtccatcagagatgcattatgct 1069 ||||||| || ||||| ||||| |||||||| || || ||||||||||| || |||| Sbjct: 111632 tgaatgtggactgtgacatgtattccaacaatagtgattcaatcagagatgcgttgtgct 111573 Query: 1070 tcttcctagatgaaga 1085 ||||||| |||||||| Sbjct: 111572 tcttccttgatgaaga 111557 Score = 48.1 bits (24), Expect = 0.15 Identities = 39/44 (88%) Strand = Plus / Minus Query: 907 atggcgcgcgagaagagacctcaggaacaacatcacttcaaagc 950 ||||||||||||||||| |||||| | || ||| |||||||||| Sbjct: 112165 atggcgcgcgagaagagccctcagtatcaccataacttcaaagc 112122 Score = 46.1 bits (23), Expect = 0.61 Identities = 62/75 (82%) Strand = Plus / Minus Query: 283 gagctctggttcggcctctactgggtcctcaccctctccgtgcgctggaacccggtccgc 342 ||||||||||||| | ||||||||||| |||| | ||||| || ||| ||| |||||| Sbjct: 115069 gagctctggttcgccgtctactgggtcatcacgcagtccgtccggtggtgccccgtccgc 115010 Query: 343 cgcaccaccttcaag 357 ||| |||||||||| Sbjct: 115009 cgccgcaccttcaag 114995 Score = 42.1 bits (21), Expect = 9.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 570 gtttgcaaagcactggattccattttgcaaaaa 602 |||||||||||||||| | ||||| |||||||| Sbjct: 98064 gtttgcaaagcactggctaccattctgcaaaaa 98032
>gb|DQ127171.1| Nicotiana tabacum cellulose synthase-like protein CslE mRNA, complete cds Length = 2402 Score = 52.0 bits (26), Expect = 0.010 Identities = 50/58 (86%) Strand = Plus / Plus Query: 583 tggattccattttgcaaaaattacaaggtggagcccaggtccccagctgcctactttg 640 |||||||| || ||||| || | ||| ||||||||||||||||| |||||||| |||| Sbjct: 545 tggattcctttctgcaagaaattcaatgtggagcccaggtcccctgctgcctattttg 602 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1541 gttcagcacaagagatggtcagaagg 1566 |||||||| ||||||||||||||||| Sbjct: 1514 gttcagcataagagatggtcagaagg 1539
>dbj|AB103615.1| Homo sapiens P5-1 gene for hypothetical protein, exon 1 and 2, partial sequence Length = 5153 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 119 tagaaacaaaagaaaggcagtt 98
>gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, complete sequence Length = 202294 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 561 ggcatctgagtttgcaaagcactgga 586 ||||||||| |||||||||||||||| Sbjct: 52229 ggcatctgaatttgcaaagcactgga 52204
>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence, complete sequence Length = 100887 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1104 ttttgtgcagtaccctcaactt 1125 |||||||||||||||||||||| Sbjct: 4029 ttttgtgcagtaccctcaactt 4050
>gb|AC012393.5|ATAC012393 Arabidopsis thaliana chromosome III BAC F10A16 genomic sequence, complete sequence Length = 87045 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1104 ttttgtgcagtaccctcaactt 1125 |||||||||||||||||||||| Sbjct: 7973 ttttgtgcagtaccctcaactt 7952
>dbj|AB202109.1| Homo sapiens HCP5 gene for hypothetical protein, exon 1, 2, 3 Length = 5154 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 119 tagaaacaaaagaaaggcagtt 98
>gb|AC013791.9| Homo sapiens chromosome 11, clone RP11-19N21, complete sequence Length = 174569 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 611 tggagcccaggtccccagctgc 632 |||||||||||||||||||||| Sbjct: 164620 tggagcccaggtccccagctgc 164599
>gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, complete sequence Length = 181025 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 611 tggagcccaggtccccagctgc 632 |||||||||||||||||||||| Sbjct: 50121 tggagcccaggtccccagctgc 50100
>dbj|AB185849.1| Oryzias latipes timp-2a mRNA for tissue inhibitor of metalloproteinase-2a, complete cds Length = 1190 Score = 44.1 bits (22), Expect = 2.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1142 aatgacatctatggaaatcccatcaa 1167 ||||||||||||||||| |||||||| Sbjct: 354 aatgacatctatggaaaccccatcaa 379
>emb|BX005439.8| Human DNA sequence from clone DASS-81K16 on chromosome 6, complete sequence Length = 110001 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 45724 tagaaacaaaagaaaggcagtt 45703
>emb|AL645933.8| Human DNA sequence from clone XXbac-181B23 on chromosome 6 Contains the MICA gene for MHC class 1 polypeptide-related sequence A, the HCP5 gene for the HLA complex P5, the HCG26, the gene coding for a transcript for an MHC class I fragment (clone 3.8-1)and four CpG islands, complete sequence Length = 111328 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 79581 tagaaacaaaagaaaggcagtt 79560
>emb|AL662866.7| Human DNA sequence from clone XXbac-205D4 on chromosome 6 Contains the gene for MHC class 1 region ORF (P5-1), the MICB gene for MHC class 1 polypeptide-related sequence B, the HCG26 gene for theHLA complex group 26 and two CpG islands, complete sequence Length = 97315 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 44372 tagaaacaaaagaaaggcagtt 44351
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1954 gctgacggtgaaggtggacgag 1975 |||||||||||||||||||||| Sbjct: 1897122 gctgacggtgaaggtggacgag 1897143
>emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene Length = 404123 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 611 tggagcccaggtccccagctgc 632 |||||||||||||||||||||| Sbjct: 332767 tggagcccaggtccccagctgc 332788
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 481398 tagaaacaaaagaaaggcagtt 481419
>emb|CR608266.1| full-length cDNA clone CS0DK007YA04 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1475 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 611 tggagcccaggtccccagctgc 632 |||||||||||||||||||||| Sbjct: 189 tggagcccaggtccccagctgc 210
>dbj|AB088109.1| Homo sapiens P5-1 gene Length = 5154 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 119 tagaaacaaaagaaaggcagtt 98
>gb|AC004184.1|AC004184 Homo sapiens clone UWGC:R3A from 6p21, complete sequence Length = 44710 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 30303 tagaaacaaaagaaaggcagtt 30324
>gb|AC003675.1|AC003675 Human Chromosome 11p15.5 P1 - 6959, complete sequence Length = 86621 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 611 tggagcccaggtccccagctgc 632 |||||||||||||||||||||| Sbjct: 24824 tggagcccaggtccccagctgc 24845
>emb|Z31714.1|HSP51GD H.sapiens P5-1g DNA Length = 3293 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 93 tagaaacaaaagaaaggcagtt 72
>dbj|AB000882.1| Homo sapiens genomic DNA for centromeric end of MHC class I region on chromosome 6, complete sequence Length = 148960 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 101379 tagaaacaaaagaaaggcagtt 101400
>dbj|AB000879.1| Homo sapiens genomic DNA for centromeric end of MHC class I region on chromosome 6, cosmid clone: TY3A9, complete sequence Length = 39436 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 14824 tagaaacaaaagaaaggcagtt 14845
>dbj|AB031007.1| Homo sapiens DNA, MHC class I region, 7.1 ancestral haplotype Length = 17063 Score = 44.1 bits (22), Expect = 2.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 849 tagaaacaaaagaaaggcagtt 870 |||||||||||||||||||||| Sbjct: 16161 tagaaacaaaagaaaggcagtt 16182
>emb|CR450744.23| Zebrafish DNA sequence from clone CH211-242F18 in linkage group 10, complete sequence Length = 153507 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 tcttgaaccacccatgcttgt 452 ||||||||||||||||||||| Sbjct: 23278 tcttgaaccacccatgcttgt 23298
>ref|NM_001070003.1| Oryza sativa (japonica cultivar-group) Os09g0478000 (Os09g0478000) mRNA, complete cds Length = 606 Score = 42.1 bits (21), Expect = 9.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 570 gtttgcaaagcactggattccattttgcaaaaa 602 |||||||||||||||| | ||||| |||||||| Sbjct: 47 gtttgcaaagcactggctaccattctgcaaaaa 79
>ref|NM_001070002.1| Oryza sativa (japonica cultivar-group) Os09g0477900 (Os09g0477900) mRNA, complete cds Length = 3275 Score = 42.1 bits (21), Expect = 9.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 570 gtttgcaaagcactggattccattttgcaaaaa 602 |||||||||||||||| | ||||| |||||||| Sbjct: 2059 gtttgcaaagcactggctaccattctgcaaaaa 2027
>gb|AC187107.3| Gallus gallus BAC clone CH261-144B12 from chromosome z, complete sequence Length = 191067 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 gagaagctaaacatctatttg 516 ||||||||||||||||||||| Sbjct: 56286 gagaagctaaacatctatttg 56306
>gb|AC154761.2| Mus musculus BAC clone RP24-416E4 from chromosome 17, complete sequence Length = 169027 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1535 atcctggttcagcacaagaga 1555 ||||||||||||||||||||| Sbjct: 145657 atcctggttcagcacaagaga 145677
>gb|AC007616.5| Homo sapiens chromosome 16 clone RP11-547D14, complete sequence Length = 132492 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 613 gagcccaggtccccagctgcc 633 ||||||||||||||||||||| Sbjct: 106871 gagcccaggtccccagctgcc 106851
>gb|AC007613.8| Homo sapiens chromosome 16 clone RP11-490O6, complete sequence Length = 161146 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 613 gagcccaggtccccagctgcc 633 ||||||||||||||||||||| Sbjct: 3676 gagcccaggtccccagctgcc 3656
>dbj|AB204812.1| Homo sapiens HCP5 gene, exon 1, 2, 3, cell_line: QBL Length = 5153 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 850 agaaacaaaagaaaggcagtt 870 ||||||||||||||||||||| Sbjct: 118 agaaacaaaagaaaggcagtt 98
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1951 cgagctgacggtgaaggtgga 1971 ||||||||||||||||||||| Sbjct: 566100 cgagctgacggtgaaggtgga 566120
>gb|AC117467.3| Homo sapiens 3 BAC RP11-669C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 90000 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 954 atcattaaatgctttgataag 974 ||||||||||||||||||||| Sbjct: 78486 atcattaaatgctttgataag 78466
>emb|BX890591.12| Zebrafish DNA sequence from clone DKEY-184J23 in linkage group 19, complete sequence Length = 171079 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2439 attctctaaacccatatgatt 2459 ||||||||||||||||||||| Sbjct: 95742 attctctaaacccatatgatt 95762
>emb|CR847882.13| Zebrafish DNA sequence from clone RP71-18L21 in linkage group 19, complete sequence Length = 149067 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2439 attctctaaacccatatgatt 2459 ||||||||||||||||||||| Sbjct: 142134 attctctaaacccatatgatt 142154
>gb|AC097502.3| Homo sapiens BAC clone RP11-340B18 from 4, complete sequence Length = 168254 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 gcagcagcagcctggggtggc 256 ||||||||||||||||||||| Sbjct: 79200 gcagcagcagcctggggtggc 79220
>gb|AC093814.3| Homo sapiens BAC clone RP11-362I16 from 4, complete sequence Length = 163201 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1880 aggaccacctcctacctcctg 1900 ||||||||||||||||||||| Sbjct: 111518 aggaccacctcctacctcctg 111498
>emb|AL450407.14| Human DNA sequence from clone RP5-1160J2 on chromosome 1 Contains the 5' end of the gene for a novel protein, complete sequence Length = 18106 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 807 aacacctggagatcacccttc 827 ||||||||||||||||||||| Sbjct: 4578 aacacctggagatcacccttc 4558
>emb|AL050336.14|HSJ447E21 Human DNA sequence from clone RP3-447E21 on chromosome 6p12.1-21.1 Contains the 5' end of the CLIC5 gene for chloride intracellular channel 5, a novel pseudogene and a CpG island, complete sequence Length = 123520 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1684 caccttttactatgtcatcat 1704 ||||||||||||||||||||| Sbjct: 70699 caccttttactatgtcatcat 70679
>emb|BX908397.7| Zebrafish DNA sequence from clone CH211-103F16 in linkage group 22, complete sequence Length = 87359 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 630 tgcctactttgcccaaggaga 650 ||||||||||||||||||||| Sbjct: 16709 tgcctactttgcccaaggaga 16729
>gb|AC009068.10|AC009068 Homo sapiens chromosome 16 clone RP11-314K3, complete sequence Length = 160356 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 tggagcccaggtccccagctg 631 ||||||||||||||||||||| Sbjct: 20227 tggagcccaggtccccagctg 20247
>ref|NM_001013570.1| Danio rerio si:ch211-103f16.4 (si:ch211-103f16.4), mRNA gb|BC090507.1| Danio rerio si:ch211-103f16.4, mRNA (cDNA clone MGC:113545 IMAGE:6898652), complete cds Length = 1545 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 630 tgcctactttgcccaaggaga 650 ||||||||||||||||||||| Sbjct: 425 tgcctactttgcccaaggaga 445
>gb|AC123908.3| Homo sapiens chromosome 16 clone CTD-2542L18, complete sequence Length = 185321 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 tggagcccaggtccccagctg 631 ||||||||||||||||||||| Sbjct: 65352 tggagcccaggtccccagctg 65372
>gb|AF160490.1|AF160490S1 Sylvilagus floridanus transcription factor p64 (c-myc) gene, exon 2 Length = 760 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 gcgggcggggctcgggctgct 275 ||||||||||||||||||||| Sbjct: 501 gcgggcggggctcgggctgct 481
>dbj|AK068464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155D10, full insert sequence Length = 3276 Score = 42.1 bits (21), Expect = 9.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 570 gtttgcaaagcactggattccattttgcaaaaa 602 |||||||||||||||| | ||||| |||||||| Sbjct: 2060 gtttgcaaagcactggctaccattctgcaaaaa 2028
>gb|AC116474.13| Mus musculus chromosome 17, clone RP23-386F9, complete sequence Length = 221805 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1535 atcctggttcagcacaagaga 1555 ||||||||||||||||||||| Sbjct: 193187 atcctggttcagcacaagaga 193167
>dbj|AP000787.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-712B9, complete sequence Length = 173441 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 tagcaggcagggaggatggcc 78 ||||||||||||||||||||| Sbjct: 130273 tagcaggcagggaggatggcc 130253
>emb|AL136501.4|CNS01DW8 Human chromosome 14 DNA sequence BAC R-804L24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180583 Score = 42.1 bits (21), Expect = 9.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1653 tctgtggcttctgggccctga 1673 ||||||||||||||||||||| Sbjct: 128858 tctgtggcttctgggccctga 128838 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 418,392,707 Number of extensions: 21891634 Number of successful extensions: 111909 Number of sequences better than 10.0: 65 Number of HSP's gapped: 111860 Number of HSP's successfully gapped: 118 Length of query: 2478 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2455 Effective length of database: 18,503,978,556 Effective search space: 45427267354980 Effective search space used: 45427267354980 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
