| Clone Name | FLbaf102e05 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os12g40880:12012.t03766:unspliced-genomic ATP binding protein, putative, expressed| Length = 3972 Score = 130 bits (279), Expect(9) = 6e-97 Identities = 54/66 (81%), Positives = 59/66 (89%) Frame = +2 / +1 Query: 374 SKYIVGLAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATMLPMDGFHLYRS 553 ++YIVG+AGPPGAGKSTVASEVV+RVNKRWSQKH S S E+IATMLPMDGFHLYRS Sbjct: 1744 NRYIVGIAGPPGAGKSTVASEVVQRVNKRWSQKHENGSSLISTEEIATMLPMDGFHLYRS 1923 Query: 554 QLDAME 571 QLDAME Sbjct: 1924 QLDAME 1941 Score = 68.0 bits (142), Expect(9) = 6e-97 Identities = 25/30 (83%), Positives = 28/30 (93%) Frame = +2 / +3 Query: 734 QHKIVIVEGNYLLLEEDVWREIRNMFDEKW 823 +HKIVIVEGNYLLLEED WR+IR +FDEKW Sbjct: 2820 RHKIVIVEGNYLLLEEDAWRDIRALFDEKW 2909 Score = 67.0 bits (140), Expect(9) = 6e-97 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +2 / +3 Query: 659 EGSVYAPSFDHGVGDPVENDIFVKPQHKIV 748 +GSVYAPSFDHGVGDPVENDIFVKPQ I+ Sbjct: 2265 QGSVYAPSFDHGVGDPVENDIFVKPQ*VII 2354 Score = 57.4 bits (119), Expect(9) = 6e-97 Identities = 23/28 (82%), Positives = 28/28 (100%) Frame = +2 / +1 Query: 911 RISYNDRPNAELILESKRAADLVIRSVD 994 +ISYNDRPNAELI++SK++ADLVIRSVD Sbjct: 3628 QISYNDRPNAELIMKSKKSADLVIRSVD 3711 Score = 51.9 bits (107), Expect(9) = 6e-97 Identities = 21/27 (77%), Positives = 25/27 (92%) Frame = +2 / +3 Query: 299 KSMEEVYDALAEHLLSALKSIDNLDSK 379 +SMEEVYDALAEHL S LK+I++LDSK Sbjct: 1257 RSMEEVYDALAEHLFSVLKNIEHLDSK 1337 Score = 48.3 bits (99), Expect(9) = 6e-97 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = +2 / +3 Query: 824 FIDIDIDVSMQRVLQRHIGTG 886 FIDIDIDVSMQRVLQRH+ TG Sbjct: 3117 FIDIDIDVSMQRVLQRHVATG 3179 Score = 44.6 bits (91), Expect(9) = 6e-97 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = +2 / +3 Query: 602 APWTFNPSLFLKCLQILKEE 661 APWTF+PS FLKCLQ L+EE Sbjct: 2127 APWTFDPSRFLKCLQTLREE 2186 Score = 30.4 bits (60), Expect(9) = 6e-97 Identities = 10/11 (90%), Positives = 11/11 (100%) Frame = +2 / +2 Query: 884 GKEPDVAAWRI 916 GKEPDVAAWR+ Sbjct: 3269 GKEPDVAAWRV 3301 Score = 28.1 bits (55), Expect(9) = 6e-97 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +2 / +2 Query: 572 DPKEAHARRG 601 DPKEAHARRG Sbjct: 2018 DPKEAHARRG 2047 Score = 123 bits (263), Expect(9) = 2e-83 Identities = 53/65 (81%), Positives = 56/65 (86%) Frame = -3 / -2 Query: 573 SSIASSWDR*RWKPSMGSIVAISSSEFGEPSFACF*DQRLLTRRTTSEATVDLPAPGGPA 394 +SIASSWDR*RWKPSMGSIVAISS E E F+CF DQRLLTR TTSEATVD PAPGGPA Sbjct: 1943 TSIASSWDR*RWKPSMGSIVAISSVEISELPFSCFWDQRLLTR*TTSEATVDFPAPGGPA 1764 Query: 393 RPTIY 379 PT+Y Sbjct: 1763 IPTMY 1749 Score = 58.8 bits (122), Expect(9) = 2e-83 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = -3 / -3 Query: 399 PARPTIYFESRLSILFKAERRCSAKASYTSSIDL 298 P + YFESR S+ FK E+RCSAKASYTSSIDL Sbjct: 1357 PRTESAYFESRCSMFFKTEKRCSAKASYTSSIDL 1256 Score = 53.8 bits (111), Expect(9) = 2e-83 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = -2 / -2 Query: 736 LRFYKYVILNWVTNTMIE*WSVN*PL 659 LR YKYVI NW+TNTMI+*WS+N* L Sbjct: 2342 LRLYKYVIFNWITNTMIK*WSIN*TL 2265 Score = 51.0 bits (105), Expect(9) = 2e-83 Identities = 23/27 (85%), Positives = 23/27 (85%) Frame = -3 / -2 Query: 993 STDLITRSAALFDSKISSAFGRSLYEI 913 STDLITRSA FD ISSAFGRSLYEI Sbjct: 3710 STDLITRSADFFDFMISSAFGRSLYEI 3630 Score = 48.7 bits (100), Expect(9) = 2e-83 Identities = 20/29 (68%), Positives = 24/29 (82%) Frame = -1 / -1 Query: 824 TISHRTCF*FPSKHLLPVINNSLRRSLFC 738 TI H+T * PS+HLLPVI+N LR+SLFC Sbjct: 2910 TIFHQTRL*CPSRHLLPVIDNCLRQSLFC 2824 Score = 44.1 bits (90), Expect(9) = 2e-83 Identities = 15/24 (62%), Positives = 20/24 (83%) Frame = -2 / -2 Query: 883 CANMSLEHSLHRDINVNVNEPFLI 812 C +MSLEHSLH DINVN+++P + Sbjct: 3176 CGDMSLEHSLHGDINVNIDKPITV 3105 Score = 41.4 bits (84), Expect(9) = 2e-83 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = -3 / -3 Query: 660 SSFRICRHFRKSDGLNVHGAPLL 592 SS R+CRHF+ DG NVHGA + Sbjct: 2185 SSLRVCRHFKNRDGSNVHGAKFI 2117 Score = 32.2 bits (64), Expect(9) = 2e-83 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -2 / -3 Query: 913 PPCCYIWLF 887 PPCCYIWLF Sbjct: 3298 PPCCYIWLF 3272 Score = 26.7 bits (52), Expect(9) = 2e-83 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = -2 / -3 Query: 601 SSSCMCFFRIL 569 SSSCMCFF IL Sbjct: 2047 SSSCMCFFWIL 2015 Score = 90.0 bits (190), Expect(9) = 1e-60 Identities = 37/66 (56%), Positives = 43/66 (65%) Frame = +1 / +3 Query: 376 KIYCWSGWPTWCRQVYCCL*SGSTRQ*ALVSEACKRWFTEFR*RYCDNASHGWFPPLSIP 555 +I+CW W TW +VY C S ST * LV EA + FT F R C +ASHGWFPPLS+P Sbjct: 1746 QIHCWYSWTTWRGKVYSCFRSCSTC**TLVPEAREW*FTYFNRRNCHDASHGWFPPLSVP 1925 Query: 556 A*CNGG 573 CNGG Sbjct: 1926 TRCNGG 1943 Score = 52.4 bits (108), Expect(9) = 1e-60 Identities = 22/29 (75%), Positives = 23/29 (79%) Frame = +3 / +1 Query: 738 TK**SSKGIIYYWKKMFGGKLETCSMRNG 824 TK** SK IIYYWKKM GG LE C M+NG Sbjct: 2824 TK**LSKAIIYYWKKMPGGTLEPCLMKNG 2910 Score = 47.3 bits (97), Expect(9) = 1e-60 Identities = 19/29 (65%), Positives = 22/29 (75%) Frame = +3 / +1 Query: 303 QWRKYMMPWLSTFFLL*RVSTILIQNILL 389 QWR+YMM WLSTFFL *R IL Q+ L+ Sbjct: 1261 QWRRYMMLWLSTFFLF*RTLNILTQSKLI 1347 Score = 45.5 bits (93), Expect(9) = 1e-60 Identities = 20/26 (76%), Positives = 22/26 (84%) Frame = +3 / +1 Query: 660 RGQFTLHHSIMVLVTQLRMTYL*NRS 737 R QF LHH IMVLV QL+MTYL*+RS Sbjct: 2266 RVQFMLHHLIMVLVIQLKMTYL*SRS 2343 Score = 42.8 bits (87), Expect(9) = 1e-60 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = +1 / +3 Query: 901 SSMADFIQRPAEC*AYLGVKKGCRSCNQIGGLLKL 1005 S +D + PA+ AY VKK CRSCNQIGG +K+ Sbjct: 3618 SCESDLV**PAKRRAYHEVKKVCRSCNQIGGFVKI 3722 Score = 38.2 bits (77), Expect(9) = 1e-60 Identities = 15/20 (75%), Positives = 16/20 (80%) Frame = +3 / +1 Query: 603 HHGHSIHHFF*NAYKS*RKR 662 HHGHSIH F*NAY+ * KR Sbjct: 2128 HHGHSIHPGF*NAYRP*EKR 2187 Score = 34.1 bits (68), Expect(9) = 1e-60 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = +1 / +2 Query: 823 VH*H*H*CLDAKSAPETYWHR 885 V+ +*H*CL AKSAPET HR Sbjct: 3116 VYRY*H*CLHAKSAPETCRHR 3178 Score = 25.8 bits (50), Expect(9) = 1e-60 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +3 / +3 Query: 570 RILKKHMQEEE 602 RI KKHMQEEE Sbjct: 2016 RIQKKHMQEEE 2048 Score = 24.9 bits (48), Expect(9) = 1e-60 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +3 / +3 Query: 882 QGKSQM*QHGG 914 Q KSQM*QHGG Sbjct: 3267 QEKSQM*QHGG 3299 Score = 77.6 bits (163), Expect(8) = 2e-55 Identities = 37/65 (56%), Positives = 42/65 (64%) Frame = -1 / -3 Query: 572 PPLHQAGIDKGGNHPWEALSQYLHLNSVNHLLHASETNAY*RVEPLQRQQ*TCLHQVGQP 393 PPLH G DKGGNHPWEA Q+L L VN+ AS T+ Y* VE L++Q *T QV Q Sbjct: 1942 PPLHLVGTDKGGNHPWEASWQFLRLK*VNYHSRASGTSVY*HVEQLRKQL*TFPRQVVQL 1763 Query: 392 DQQYI 378 QQ I Sbjct: 1762 YQQCI 1748 Score = 62.9 bits (131), Expect(8) = 2e-55 Identities = 26/39 (66%), Positives = 31/39 (79%) Frame = -3 / -3 Query: 777 SSNK*FPSTITILCCGFTNMSFSTGSPTP*SNDGA*TDP 661 S+ + + + I CGFTNMSFSTGSPTP*SNDGA*T+P Sbjct: 2383 STKRIYSGSAMITHCGFTNMSFSTGSPTP*SNDGA*TEP 2267 Score = 51.9 bits (107), Expect(8) = 2e-55 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = -1 / -1 Query: 386 QYILNQDCRYSSKQKEGAQPRHHILPPLTW 297 Q L+QD + SSKQK+GAQP+HHI PPLT+ Sbjct: 1344 QLTLSQDVQCSSKQKKGAQPKHHIPPPLTY 1255 Score = 45.5 bits (93), Expect(8) = 2e-55 Identities = 18/29 (62%), Positives = 23/29 (79%) Frame = -2 / -1 Query: 1006 LA*VVHRSDYKICSPF*LQDKLSIRPVVV 920 L+* +HRSDYKIC F*L DKL + PV++ Sbjct: 3723 LS*QIHRSDYKICRLF*LHDKLCVWPVII 3637 Score = 39.1 bits (79), Expect(8) = 2e-55 Identities = 15/20 (75%), Positives = 15/20 (75%) Frame = -2 / -2 Query: 661 LFL*DL*AFQKK*WIECPWC 602 LF L*AFQK WIECPWC Sbjct: 2186 LFSQGL*AFQKPGWIECPWC 2127 Score = 35.9 bits (72), Expect(8) = 2e-55 Identities = 15/22 (68%), Positives = 19/22 (86%) Frame = -1 / -1 Query: 887 SLCQYVSGALFASRHQCQCQ*T 822 +L ++VSGALFA RHQCQ +*T Sbjct: 3180 NLWRHVSGALFAWRHQCQYR*T 3115 Score = 27.2 bits (53), Expect(8) = 2e-55 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = -3 / -1 Query: 912 RHAATSGSFP 883 RHAATSGSFP Sbjct: 3297 RHAATSGSFP 3268 Score = 24.9 bits (48), Expect(8) = 2e-55 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -1 / -2 Query: 602 LLFLHVLL*DPPL 564 LLFLHVLL DP + Sbjct: 2048 LLFLHVLLLDPTM 2010 Score = 77.1 bits (162), Expect(9) = 3e-51 Identities = 36/69 (52%), Positives = 45/69 (65%) Frame = +3 / +2 Query: 366 ILIQNILLVWLAHLVQASLLLPLKWFDASISVGLRSMQKMVHRIQMKILRQCFPWMVSTF 545 +L + LLV L HL + SL L K F+ I+ G RS + +VH Q K L +CFPWMVSTF Sbjct: 1736 LLSTDTLLV*LDHLARESLQLLPKLFNVLINAGPRSTRMVVHLFQPKKLPRCFPWMVSTF 1915 Query: 546 IDPSLMQWR 572 I P+ MQWR Sbjct: 1916 IGPN*MQWR 1942 Score = 45.5 bits (93), Expect(9) = 3e-51 Identities = 19/27 (70%), Positives = 21/27 (77%) Frame = +1 / +2 Query: 301 VNGGSI*CLG*APSFCFEEYRQS*FKI 381 VNGG I*C G*AP FCFEE+ S* K+ Sbjct: 1259 VNGGGI*CFG*APFFCFEEH*TS*LKV 1339 Score = 45.5 bits (93), Expect(9) = 3e-51 Identities = 21/33 (63%), Positives = 22/33 (66%) Frame = +1 / +2 Query: 661 GVSLRSIIRSWCW*PS*E*HICKTAAQNSDRRR 759 G SL SII SWCW* S*+*HICK A R R Sbjct: 2267 GFSLCSII*SWCW*SS*K*HICKAAVSYHCRSR 2365 Score = 44.6 bits (91), Expect(9) = 3e-51 Identities = 21/29 (72%), Positives = 24/29 (82%) Frame = +1 / +2 Query: 739 QNSDRRRELFITGRRCLEGN*KHVR*EMV 825 QNSD RR+L ITGRRCLEG+* V *+MV Sbjct: 2825 QNSDCRRQLSITGRRCLEGH*SLV**KMV 2911 Score = 37.7 bits (76), Expect(9) = 3e-51 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = +1 / +2 Query: 595 KRSTMDIQSITFSEMPTNPKGRGVS 669 K STMDI+SI EMPT+P+ RGV+ Sbjct: 2120 KFSTMDIRSIPVFEMPTDPERRGVT 2194 Score = 37.3 bits (75), Expect(9) = 3e-51 Identities = 17/22 (77%), Positives = 18/22 (81%) Frame = +3 / +2 Query: 927 TGRMLSLSWSQKGLQIL*SDRW 992 TG+ SLS SQK LQIL*SDRW Sbjct: 3644 TGQTQSLS*SQKSLQIL*SDRW 3709 Score = 33.6 bits (67), Expect(9) = 3e-51 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +3 / +1 Query: 822 GSLTLTLMSRCKECSRDILAQ 884 G LTLMS CKECSRD+ Q Sbjct: 3115 GLSILTLMSPCKECSRDMSPQ 3177 Score = 24.0 bits (46), Expect(9) = 3e-51 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +1 / +1 Query: 883 RERARCSSMA 912 R+RARCSSMA Sbjct: 3268 RKRARCSSMA 3297 Score = 23.1 bits (44), Expect(9) = 3e-51 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +1 / +1 Query: 571 GS*RSTCKKR 600 GS RSTCKKR Sbjct: 2017 GSKRSTCKKR 2046 Score = 55.1 bits (114), Expect(8) = 1e-38 Identities = 22/38 (57%), Positives = 24/38 (63%) Frame = -1 / -1 Query: 734 AVLQICHSQLGHQHHDRMMERKLTPLPLGFVGISEKVM 621 A LQICH QL HQHHD+MME KL P IS+ M Sbjct: 2340 AALQICHFQLDHQHHDQMMEHKLNPADKDVSAISQNTM 2227 Score = 41.8 bits (85), Expect(8) = 1e-38 Identities = 18/22 (81%), Positives = 20/22 (90%) Frame = -3 / -3 Query: 801 LISLQTSSSSNK*FPSTITILC 736 L+SLQ SSSSN+* PSTITILC Sbjct: 2887 LMSLQASSSSNR*LPSTITILC 2822 Score = 41.8 bits (85), Expect(8) = 1e-38 Identities = 17/21 (80%), Positives = 17/21 (80%) Frame = -2 / -1 Query: 571 LHCIKLGSIKVETIHGKHCRN 509 LHCI LG IKVETIHGKH N Sbjct: 1941 LHCI*LGPIKVETIHGKHRGN 1879 Score = 39.6 bits (80), Expect(8) = 1e-38 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = -2 / -1 Query: 475 MLLRPTLIDASNHFRGNSRLACTRWASQTNNI 380 +LL P I+ N+F N RL+ RW+S TNN+ Sbjct: 1845 VLLGPAFINTLNNFGSNCRLSRARWSSYTNNV 1750 Score = 35.9 bits (72), Expect(8) = 1e-38 Identities = 18/30 (60%), Positives = 21/30 (70%) Frame = -1 / -3 Query: 1001 LSSPPI*LQDLQPFLTPR*AQHSAGRCMKS 912 L++PPI*LQDLQ FLT *A AG +S Sbjct: 3718 LTNPPI*LQDLQTFLTS**ALRLAGHYTRS 3629 Score = 35.0 bits (70), Expect(8) = 1e-38 Identities = 14/24 (58%), Positives = 20/24 (83%) Frame = -2 / -2 Query: 385 NIF*IKIVDTLQSRKKVLSQGIIY 314 ++ *+K+ + LQ+RKKVLSQ IIY Sbjct: 1343 SLL*VKMFNVLQNRKKVLSQSIIY 1272 Score = 33.1 bits (66), Expect(8) = 1e-38 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = -3 / -3 Query: 885 PVPICLWSTLCIET 844 PV CLWSTLC+ET Sbjct: 3178 PVATCLWSTLCMET 3137 Score = 24.0 bits (46), Expect(8) = 1e-38 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = -3 / -1 Query: 600 PLLACASLGS 571 PLLACAS GS Sbjct: 2046 PLLACASFGS 2017 Score = 33.1 bits (66), Expect = 4.1 Identities = 18/30 (60%), Positives = 21/30 (70%) Frame = -1 / -1 Query: 668 LTPLPLGFVGISEKVMD*MSMVLLFLHVLL 579 +TPL G VGIS+ MD MSMVL L+ LL Sbjct: 2193 VTPLLSGSVGISKTGMDRMSMVLNLLN*LL 2104
>LOC_Os05g28630:12005.t02511:unspliced-genomic expressed protein| Length = 4766 Score = 30.4 bits (60), Expect(2) = 0.26 Identities = 12/37 (32%), Positives = 17/37 (45%) Frame = +2 / -1 Query: 503 EDIATMLPMDGFHLYRSQLDAMEDPKEAHARRGAPWT 613 E ++ LP G HL + P+E +G PWT Sbjct: 2756 EQCSS*LPQGGRHLESHS*QVISSPREPQIGQGTPWT 2646 Score = 24.0 bits (46), Expect(2) = 0.26 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = +1 / -3 Query: 598 RSTMDIQSITFSEMPTN 648 R TMD FSE PTN Sbjct: 2661 RHTMDSHWFRFSESPTN 2611
>LOC_Os08g34390:12008.t03179:unspliced-genomic fibroin heavy chain precursor, putative, expressed| Length = 1038 Score = 27.6 bits (54), Expect(2) = 0.39 Identities = 7/15 (46%), Positives = 7/15 (46%) Frame = +1 / +2 Query: 385 CWSGWPTWCRQVYCC 429 CW W WCR C Sbjct: 713 CWPAWRLWCRLRLVC 757 Score = 26.3 bits (51), Expect(2) = 0.39 Identities = 8/21 (38%), Positives = 16/21 (76%) Frame = +3 / +2 Query: 480 KMVHRIQMKILRQCFPWMVST 542 ++V R+Q +++R +PW VS+ Sbjct: 746 RLVCRVQSRLIRGQWPWQVSS 808
>LOC_Os01g13350:12001.t01197:unspliced-genomic 25.3 kDa vesicle transport protein, putative, expressed| Length = 4816 Score = 29.0 bits (57), Expect(2) = 1.1 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -2 / -1 Query: 910 PCCYIWLFPCANMSLEH 860 PC + W PC ++SL+H Sbjct: 4072 PCSFGWYVPCPSISLKH 4022 Score = 29.0 bits (57), Expect(2) = 1.1 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -1 / -3 Query: 530 PWEALSQYLHLNSVNHL 480 PW++LS Y + NSV H+ Sbjct: 986 PWDSLSNYSNSNSVTHI 936
>LOC_Os01g66010:12001.t05962:unspliced-genomic amino acid carrier, putative, expressed| Length = 3049 Score = 35.0 bits (70), Expect = 1.1 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 / +2 Query: 204 NPHFISQLLGLHGRRNTMLHAIRDKELHR*RPSQ 305 +P S LL LH RR +LH +R + R RPS+ Sbjct: 1832 DPRLRSDLLALHARRRHVLHLLRHRPQPRHRPSR 1933
>LOC_Os08g15920:12008.t01466:unspliced-genomic expressed protein| Length = 4594 Score = 34.5 bits (69), Expect = 1.6 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 / -2 Query: 330 LSTFFLL*RVSTILIQNILLVWLAHLVQASLLLPLKWFDASI 455 LS F LL +S L+ ++L L+H LL P +WFD + Sbjct: 4173 LSFFLLLLLLSLFLLLSLLFTLLSHSSTCPLLGPSRWFDGIV 4048
>LOC_Os07g48960:12007.t04524:unspliced-genomic lon protease homolog 2, mitochondrial precursor, putative, expressed| Length = 10534 Score = 34.5 bits (69), Expect = 1.6 Identities = 10/27 (37%), Positives = 20/27 (74%) Frame = +2 / +1 Query: 383 IVGLAGPPGAGKSTVASEVVRRVNKRW 463 I+ L+GPPG GK+++ + R +N+++ Sbjct: 4768 IICLSGPPGVGKTSIGRSIARALNRKF 4848
>LOC_Os03g29222:12003.t02544:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2283 Score = 34.5 bits (69), Expect = 1.6 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +2 / +1 Query: 848 SMQRVLQRHIGTGKEPDVAAWRISYNDRPNAELILESKRAADL 976 S +R +R K+P+VA WR + NDR + + SK A++L Sbjct: 91 SAEREKRRKSAHDKKPNVADWRKNDNDRSGNDYNVSSKTASEL 219
>LOC_Os03g19350:12003.t01701:unspliced-genomic ATP-dependent protease La family protein, expressed| Length = 11261 Score = 34.5 bits (69), Expect = 1.6 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +2 / +2 Query: 383 IVGLAGPPGAGKSTVASEVVRRVNKRW 463 I+ L GPPG GK+++ V R +N+++ Sbjct: 5534 IICLCGPPGVGKTSIGRSVARALNRKF 5614
>LOC_Os11g17990:12011.t01572:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5682 Score = 28.6 bits (56), Expect(2) = 2.1 Identities = 13/53 (24%), Positives = 26/53 (49%) Frame = +3 / -3 Query: 390 VWLAHLVQASLLLPLKWFDASISVGLRSMQKMVHRIQMKILRQCFPWMVSTFI 548 V L L+ ++ F+ S S+G+R + ++ ++ CF ++ S FI Sbjct: 1324 VTLTSLIFEISVIKTSQFEQSSSLGIRDFNLSISDLRDSMINSCFLYIFSHFI 1166 Score = 22.6 bits (43), Expect(2) = 2.1 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = +3 / -3 Query: 576 LKKHMQEEEHHGHSIHH 626 L+KH+ + H SIHH Sbjct: 1138 LQKHLPHDLHTQCSIHH 1088
>LOC_Os12g15920:12012.t01446:unspliced-genomic copper ion binding protein, putative, expressed| Length = 8267 Score = 34.1 bits (68), Expect = 2.1 Identities = 16/52 (30%), Positives = 22/52 (42%) Frame = +1 / +2 Query: 862 APETYWHRERARCSSMADFIQRPAEC*AYLGVKKGCRSCNQIGGLLKLDPMF 1017 AP+ HR R+ P C Y+GV +GC S + LD +F Sbjct: 2189 APDAGLHRLRSPAKG*VQCSAGPGNCIVYVGVVQGCNSTFDLSDCTGLDDIF 2344
>LOC_Os11g01330:12011.t00033:unspliced-genomic expressed protein| Length = 5208 Score = 34.1 bits (68), Expect = 2.1 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -2 / -2 Query: 910 PCCYIWLFPCANMSLEHSLHRDI 842 PCC +LF C N++L+H+L I Sbjct: 4688 PCCGKYLFHCTNINLQHALRTQI 4620
>LOC_Os03g18210:12003.t01595:unspliced-genomic appr-1-p processing enzyme family protein, expressed| Length = 3379 Score = 34.1 bits (68), Expect = 2.1 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 / -1 Query: 438 TSEATVDLPAPGGPARPTI 382 T+ A VDLP PGGP R TI Sbjct: 313 TASAKVDLPLPGGPTRTTI 257
>LOC_Os01g24790:12001.t02198:unspliced-genomic 3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase, putative,| expressed Length = 1734 Score = 34.1 bits (68), Expect = 2.1 Identities = 21/66 (31%), Positives = 26/66 (39%) Frame = -3 / -1 Query: 492 GEPSFACF*DQRLLTRRTTSEATVDLPAPGGPARPTIYFESRLSILFKAERRCSAKASYT 313 G PS A TRRT+S A A R +++L RRCS S Sbjct: 987 GRPSAAILLKPTTATRRTSSSAGTSSAAVRARQRNAARTSKLVAVLLPPRRRCSGCGSSA 808 Query: 312 SSIDLA 295 SS+ A Sbjct: 807 SSLSAA 790
>LOC_Os08g26970:12008.t02461:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5405 Score = 27.2 bits (53), Expect(2) = 2.8 Identities = 10/36 (27%), Positives = 20/36 (55%) Frame = +3 / -1 Query: 441 FDASISVGLRSMQKMVHRIQMKILRQCFPWMVSTFI 548 F+ S S+G+R + ++ ++ CF ++ S FI Sbjct: 1289 FEQSSSLGIRDFNLSISDLRDSMINSCFLYIFSHFI 1182 Score = 23.5 bits (45), Expect(2) = 2.8 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = +3 / -2 Query: 573 ILKKHMQEEEHHGHSIHH 626 +L+KH+ + H + IHH Sbjct: 1156 LLQKHLPHDLHTQYPIHH 1103
>LOC_Os08g30634:12008.t02815:unspliced-genomic resistance protein, putative, expressed| Length = 15915 Score = 33.6 bits (67), Expect = 3.0 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = -3 / -2 Query: 471 F*DQRLLTRRTTSEATVDLPAPGGPARP 388 F +R++T + +SE ++LPAPGG RP Sbjct: 15638 FFSRRVITHQFSSEC*INLPAPGGIKRP 15555
>LOC_Os04g56630:12004.t05132:unspliced-genomic expressed protein| Length = 7416 Score = 27.2 bits (53), Expect(2) = 3.6 Identities = 10/42 (23%), Positives = 20/42 (47%) Frame = +3 / +3 Query: 507 ILRQCFPWMVSTFIDPSLMQWRILKKHMQEEEHHGHSIHHFF 632 ++ QC +S I L ++ H+Q + +HG + +F Sbjct: 2868 LIWQCTEQQISILIFQQLQ*QHLIMMHIQHQRNHGFHLLQYF 2993 Score = 23.1 bits (44), Expect(2) = 3.6 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = +3 / +3 Query: 606 HGHSIHHFF*NAYKS*RKRGQFTLHHSIMVLVTQ 707 H +HH + N R QF LHHS+ + Q Sbjct: 3054 HMIPLHHRYDN*LLPYRWTLQFMLHHSLEQFLVQ 3155
>LOC_Os01g25484:12001.t02264:unspliced-genomic ferredoxin--nitrite reductase, chloroplast precursor, putative,| expressed Length = 6554 Score = 27.6 bits (54), Expect(2) = 3.7 Identities = 7/15 (46%), Positives = 13/15 (86%) Frame = -1 / -3 Query: 749 SLFCAAVLQICHSQL 705 SLFC ++++CH+Q+ Sbjct: 4107 SLFCKCIVKLCHNQI 4063 Score = 22.6 bits (43), Expect(2) = 3.7 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -2 / -2 Query: 901 YIWLFPCANMSLEHSLHRDINVN 833 Y+W NMS+E S R ++V+ Sbjct: 4198 YMWTQIKINMSIEQSKTRSLHVS 4130
>LOC_Os01g45550:12001.t04010:unspliced-genomic auxin efflux carrier component 3a, putative, expressed| Length = 4643 Score = 25.8 bits (50), Expect(2) = 3.8 Identities = 10/33 (30%), Positives = 17/33 (51%) Frame = +2 / +1 Query: 191 SVSFQPAFHQPVTRATWKKKHNVTCYQRQGAPQ 289 S S P P T A+W++ +C +G+P+ Sbjct: 532 STSSPPTTRTP*TSASWRRTRCRSCSSWRGSPR 630 Score = 24.4 bits (47), Expect(2) = 3.8 Identities = 11/44 (25%), Positives = 20/44 (45%) Frame = +2 / +2 Query: 392 LAGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIATML 523 + PP A + A V + + +HA+ G P +D + +L Sbjct: 629 VVAPPLADRRAAAGLVHHALLPLHAAQHARHGDPAADRHVRAIL 760
>LOC_Os11g02340:12011.t00128:unspliced-genomic hypothetical protein| Length = 1725 Score = 33.1 bits (66), Expect = 4.1 Identities = 12/46 (26%), Positives = 26/46 (56%) Frame = +3 / -1 Query: 357 VSTILIQNILLVWLAHLVQASLLLPLKWFDASISVGLRSMQKMVHR 494 +S L+ ++L L+H LL P +WF+ + ++ ++++HR Sbjct: 861 LSFFLLLSLLYTLLSHSSTCPLLSPSRWFEGIVGPASQTCRQLLHR 724
>LOC_Os02g34080:12002.t03049:unspliced-genomic XIB, putative, expressed| Length = 21889 Score = 33.1 bits (66), Expect = 4.1 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -2 / -2 Query: 604 CSSSCMCFFRILHCIKLGSIKVETI 530 CSSSC F R++H IKL +I++ I Sbjct: 3588 CSSSCNIF*RVIHPIKLNAIRLVEI 3514
>LOC_Os02g07480:12002.t00644:unspliced-genomic transglycosylase SLT domain containing protein, expressed| Length = 7939 Score = 33.1 bits (66), Expect = 4.1 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +1 / -3 Query: 1180 FKYLIIISFYFNIPVCSKKK 1239 F YL I S ++NIPVC KKK Sbjct: 7751 FGYLYIKSDFYNIPVCRKKK 7692
>LOC_Os04g09760:12004.t00810:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6624 Score = 25.4 bits (49), Expect(2) = 4.9 Identities = 9/35 (25%), Positives = 19/35 (54%) Frame = +3 / -2 Query: 444 DASISVGLRSMQKMVHRIQMKILRQCFPWMVSTFI 548 + S S+G+R + ++ ++ CF ++ S FI Sbjct: 2306 EQSSSLGIRDFNLAISELRDSMINSCFLYIFSHFI 2202 Score = 24.4 bits (47), Expect(2) = 4.9 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +3 / -1 Query: 573 ILKKHMQEEEHHGHSIHHFF*NAYK 647 +L+KH+ + H + IHH *+ Y+ Sbjct: 2175 LLQKHLPHDLHTLYPIHHAP*SKYR 2101
>LOC_Os09g36300:12009.t03106:unspliced-genomic lon protease homolog 1, mitochondrial precursor, putative, expressed| Length = 7022 Score = 32.7 bits (65), Expect = 5.6 Identities = 9/27 (33%), Positives = 20/27 (74%) Frame = +2 / +2 Query: 383 IVGLAGPPGAGKSTVASEVVRRVNKRW 463 ++ GPPG GK+++AS + + +N+++ Sbjct: 3566 VLCFVGPPGVGKTSLASSIAKALNRKF 3646
>LOC_Os08g23780:12008.t02149:unspliced-genomic transferase, transferring glycosyl groups, putative, expressed| Length = 5150 Score = 32.7 bits (65), Expect = 5.6 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -2 / -2 Query: 220 LMKCGLKAHTQRRHCLDHFASHGE 149 + K GLK+HTQ H + HF + GE Sbjct: 5053 MQK*GLKSHTQENHTI*HFPAPGE 4982
>LOC_Os03g15810:12003.t01367:unspliced-genomic ATP binding protein, putative, expressed| Length = 7670 Score = 32.7 bits (65), Expect = 5.6 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 / +2 Query: 350 LKSIDNLDSKYIVGLAGPPGAGKSTVA 430 L +DN+ ++ L GPPG GK+T+A Sbjct: 1658 LVQLDNISMLQVLLLCGPPGLGKTTLA 1738
>LOC_Os03g08560:12003.t00713:unspliced-genomic ATPase 10, plasma membrane-type, putative, expressed| Length = 5866 Score = 32.7 bits (65), Expect = 5.6 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = -2 / +3 Query: 196 HTQRRHCLDHFASHGETPTRYISRQAEPAEIS 101 H QRR DH S G PTR R AEI+ Sbjct: 4764 HQQRRALSDHLLSSGWRPTRIAERAKRRAEIA 4859
>LOC_Os07g35140:12007.t03189:unspliced-genomic receptor-like serine-threonine protein kinase, putative, expressed| Length = 5369 Score = 32.2 bits (64), Expect = 7.7 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +2 / -3 Query: 395 AGPPGAGKSTVASEVVRRVNKRWSQKHAKDGSPNSDEDIAT 517 A PP G+S+ +S R RW++ SP S AT Sbjct: 615 ASPPATGRSSASSRSARPTRSRWTRSRPAR*SPASCRPAAT 493
>LOC_Os11g05130:12011.t00406:unspliced-genomic PHD-finger family protein, expressed| Length = 8464 Score = 25.4 bits (49), Expect(2) = 8.6 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +2 / +3 Query: 908 WRISYNDRPNAELILESKRAADLVIRSVD 994 W+ S ND+ N E E RA D++++ D Sbjct: 6633 WKKSTNDKNNNENSGEVFRANDVILKGKD 6719 Score = 23.5 bits (45), Expect(2) = 8.6 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = +3 / +3 Query: 1122 NKPYCPINLFSR 1157 NKPYCP L+ R Sbjct: 6759 NKPYCPDFLYVR 6794 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 528,754,634 Number of extensions: 8731003 Number of successful extensions: 30908 Number of sequences better than 10.0: 29 Length of query: 414 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 364 Effective length of database: 52,799,986 Effective search space: 19219194904 Effective search space used: 19219194904 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)