ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf102e02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK070498:Os02g0823600 | 116 | 1e-26 | 2 | AK069806:Os07g0564000 | 33 | 0.17 | 3 | AK066765:Os01g0158900 | 30 | 1.5 | 4 | Os09g0450600:Os09g0450600 | 29 | 1.9 | 5 | AK104009:Os08g0541400 | 29 | 1.9 | 6 | AK068255:Os08g0541400 | 29 | 1.9 | 7 | Os01g0892300:Os01g0892300 | 29 | 2.5 | 8 | AK100512:Os06g0695700 | 28 | 3.2 | 9 | Os04g0486800:Os04g0486800 | 28 | 4.2 | 10 | AK100715:Os02g0241300 | 28 | 4.2 | 11 | AK104828:Os01g0886300 | 27 | 7.2 | 12 | AK102819:Os01g0744300 | 27 | 7.2 | 13 | AK070901:Os12g0478100 | 27 | 7.2 | 14 | AK065093:Os01g0886300 | 27 | 7.2 | 15 | Os11g0216400:Os11g0216400 | 27 | 9.4 | 16 | AK119940:Os07g0672500 | 27 | 9.4 | 17 | AK067432:Os07g0672500 | 27 | 9.4 |
|---|
>AK070498:Os02g0823600 | Length = 85 Score = 116 bits (290), Expect = 1e-26 Identities = 58/93 (62%), Positives = 67/93 (72%) Frame = +3 Query: 78 MVCVACLIPLFLIPFVNALPYLFDLLLSKVYRMLGWEYRRPERVPAACPFKPAASKTEGA 257 MVC+ACL+PLFLIP VNALP LF L+LSK+YR+ GWEYRRPER P ACPFKPAA EGA Sbjct: 1 MVCLACLLPLFLIPVVNALPLLFHLILSKIYRLFGWEYRRPERAPPACPFKPAAKNNEGA 60 Query: 258 AGESTPLVNPHVISESKAPVEPESAAAEGKKDD 356 + ES PLV P S + + AE KK+D Sbjct: 61 S-ESKPLVEPQSASTT-------TTTAEDKKED 85
>AK069806:Os07g0564000 | Length = 408 Score = 32.7 bits (73), Expect = 0.17 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -2 Query: 91 ATHTMAGDRGGRAEGGSSQSS 29 ATH AGDRGG +GGSS +S Sbjct: 5 ATHRRAGDRGGGGDGGSSSAS 25
>AK066765:Os01g0158900 | Length = 909 Score = 29.6 bits (65), Expect = 1.5 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = +3 Query: 192 RRPERVPAACPFKPAASKTEGAAGESTPLVNPHVISESKAPVEPESAAAEGKKDD 356 R+P V AA +PA S AA +P NP +S+S +P S ++ G++ D Sbjct: 17 RKPVPVAAAAARRPAPSPAAAAAPAPSP-SNPSAVSDS----DPSSYSSSGEETD 66
>Os09g0450600:Os09g0450600 | Length = 481 Score = 29.3 bits (64), Expect = 1.9 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = +3 Query: 165 VYRMLGWEYRRPERVPAACPFKPAASKTEGAAGESTPLVNPHVISESKAPVEPESAAA 338 V + G RRP R P++ P PAA+ AG L S+ P P S+++ Sbjct: 135 VASLAGRHARRPRRPPSSSPLSPAAALVASLAGRRAHL-------PSRRPRRPPSSSS 185
>AK104009:Os08g0541400 | Length = 261 Score = 29.3 bits (64), Expect = 1.9 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = -1 Query: 347 LPFSRGTLWFHRSFRFAYDMGINKRR*FACCTFSLACCRLERAGSRDSLRPP 192 LP S+ L R+FR + + RR F CC CR E AG + PP Sbjct: 25 LPSSKPWLPDGRAFRGSRALSSAARRCFCCC------CRCEAAGEAGTAPPP 70
>AK068255:Os08g0541400 | Length = 261 Score = 29.3 bits (64), Expect = 1.9 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = -1 Query: 347 LPFSRGTLWFHRSFRFAYDMGINKRR*FACCTFSLACCRLERAGSRDSLRPP 192 LP S+ L R+FR + + RR F CC CR E AG + PP Sbjct: 25 LPSSKPWLPDGRAFRGSRALSSAARRCFCCC------CRCEAAGEAGTAPPP 70
>Os01g0892300:Os01g0892300 | Length = 279 Score = 28.9 bits (63), Expect = 2.5 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = +1 Query: 217 PARSSLQQARLKVQQANQRLLLIPMS*ANRKLRWNQRVPRLKGRKTINTRVVFI 378 P SSLQ+ NQ L P+ R+ RW R+ R+ +I V F+ Sbjct: 185 PIPSSLQKFSASNFAENQGLCGAPLDNCPRRRRWRLRLHRINDESSIGAAVGFV 238
>AK100512:Os06g0695700 | Length = 602 Score = 28.5 bits (62), Expect = 3.2 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = +3 Query: 189 YRRPERVPAACPFKPAASKTEGAAGESTPLVNPHVISESKAPVEPESAA 335 +++P P A P AA+ E A L H +AP EP AA Sbjct: 223 HQQPTEAPPAEPSPAAAAVQEEAVTSRAQLTEEHHQQPPEAPAEPSPAA 271
>Os04g0486800:Os04g0486800 | Length = 874 Score = 28.1 bits (61), Expect = 4.2 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +3 Query: 198 PERVPAACPFKPAASKTEGAAGESTPLVNPHVISESKAPVEPESAAAEGKK 350 P VP+A P P + T+ V+P+ +SE V SAAAE K Sbjct: 136 PSEVPSAAPRPPPTAATDAPPQTRPKRVHPNSVSE----VAAASAAAEQPK 182
>AK100715:Os02g0241300 | Length = 373 Score = 28.1 bits (61), Expect = 4.2 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Frame = +3 Query: 171 RMLGWEYRRPERV-----PAACPFKPAASKTEGAAGESTPLVNPHVISESKAPVE 320 +MLG + + P PAA P P SKT G ST +P V+ + A +E Sbjct: 6 KMLGGKNKPPHPPSVLPDPAATPCLPPRSKTMVLGGNSTHSRHPSVLPDEAAAME 60
>AK104828:Os01g0886300 | Length = 290 Score = 27.3 bits (59), Expect = 7.2 Identities = 23/82 (28%), Positives = 35/82 (42%) Frame = -3 Query: 531 VEYM*IKAHSTTKHTCTQNQGNREKHHCYIQHLLLQVYILTLIIS*LQF*LYKHNACVNR 352 ++Y HS+ + + E+ Y+ LL + L + L F N + R Sbjct: 11 LQYSPSPVHSSPHPLSSLRYSSSERER-YLAELLAERQKLAPFVQVLPFCTRLLNQEILR 69 Query: 351 LSSLQPRHSLVPPELSIRL*HG 286 SSL P H+ V PE R+ HG Sbjct: 70 ASSLPPNHNFVDPE---RIEHG 88
>AK102819:Os01g0744300 | Length = 690 Score = 27.3 bits (59), Expect = 7.2 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +1 Query: 31 TTDCFLLRPSRPDPPPW 81 TT CF L PS P PPP+ Sbjct: 14 TTICFPLPPSLPSPPPF 30
>AK070901:Os12g0478100 | Length = 86 Score = 27.3 bits (59), Expect = 7.2 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -3 Query: 492 HTCTQNQGNREKHHCYIQHLLLQV 421 HTC Q G + H Y +H+ +QV Sbjct: 29 HTCQQLGGGHQSMHIYSKHIKIQV 52
>AK065093:Os01g0886300 | Length = 290 Score = 27.3 bits (59), Expect = 7.2 Identities = 23/82 (28%), Positives = 35/82 (42%) Frame = -3 Query: 531 VEYM*IKAHSTTKHTCTQNQGNREKHHCYIQHLLLQVYILTLIIS*LQF*LYKHNACVNR 352 ++Y HS+ + + E+ Y+ LL + L + L F N + R Sbjct: 11 LQYSPSPVHSSPHPLSSLRYSSSERER-YLAELLAERQKLAPFVQVLPFCTRLLNQEILR 69 Query: 351 LSSLQPRHSLVPPELSIRL*HG 286 SSL P H+ V PE R+ HG Sbjct: 70 ASSLPPNHNFVDPE---RIEHG 88
>Os11g0216400:Os11g0216400 | Length = 374 Score = 26.9 bits (58), Expect = 9.4 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%) Frame = +3 Query: 213 AACPF-KPAASKTEGAAGESTPLVNPHVISESKAPV----EPESAAAEGKKDD 356 +A PF +PAAS + A + PL PH +S P +A+A + DD Sbjct: 17 SASPFLRPAASASRSAPLAAAPLPPPHQVSRPWLPAAGFRSSAAASAAARGDD 69
>AK119940:Os07g0672500 | Length = 146 Score = 26.9 bits (58), Expect = 9.4 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +3 Query: 192 RRPERVPAACPFKPAASKTEGAAGESTPLVNPHVISESKAPVEPESAAAEG 344 RR AA P A+ GAAG STP ++++A V +A A G Sbjct: 12 RRASSEEAASPATDGAAAGAGAAGSSTPRRRSGKRAKAEATVGTPAAKAGG 62
>AK067432:Os07g0672500 | Length = 1081 Score = 26.9 bits (58), Expect = 9.4 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +3 Query: 192 RRPERVPAACPFKPAASKTEGAAGESTPLVNPHVISESKAPVEPESAAAEG 344 RR AA P A+ GAAG STP ++++A V +A A G Sbjct: 12 RRASSEEAASPATDGAAAGAGAAGSSTPRRRSGKRAKAEATVGTPAAKAGG 62 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,379,915 Number of extensions: 359328 Number of successful extensions: 1287 Number of sequences better than 10.0: 17 Number of HSP's gapped: 1282 Number of HSP's successfully gapped: 17 Length of query: 190 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 95 Effective length of database: 11,595,960 Effective search space: 1101616200 Effective search space used: 1101616200 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
