ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf102e02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT832488.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA036N18, full insert sequence Length = 551 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/153 (83%) Strand = Plus / Plus Query: 105 ctcttcctcatccccttcgtcaacgcgctcccctacctcttcgacctcctcctcagcaag 164 |||||| | |||||| |||||||||| ||||||| |||||| ||||| ||||||||||| Sbjct: 108 ctcttcttgatccccgtcgtcaacgccctccccttgctcttccacctcatcctcagcaag 167 Query: 165 gtttatcgcatgctcggatgggagtacaggaggcctgagcgagtcccggctgcctgcccg 224 ||||||| | | |||||||| |||||||||||||| ||| |||| |||| |||||| Sbjct: 168 atttatcggctatttggatgggaatacaggaggcctgaaagagccccgcctgcttgcccg 227 Query: 225 ttcaagcctgcagcaagcaagactgaaggtgca 257 || |||||||| |||| || | |||||||||| Sbjct: 228 tttaagcctgcggcaaagaacaatgaaggtgca 260
>ref|NM_001055105.1| Oryza sativa (japonica cultivar-group) Os02g0823600 (Os02g0823600) mRNA, complete cds Length = 590 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/153 (83%) Strand = Plus / Plus Query: 105 ctcttcctcatccccttcgtcaacgcgctcccctacctcttcgacctcctcctcagcaag 164 |||||| | |||||| |||||||||| ||||||| |||||| ||||| ||||||||||| Sbjct: 126 ctcttcttgatccccgtcgtcaacgccctccccttgctcttccacctcatcctcagcaag 185 Query: 165 gtttatcgcatgctcggatgggagtacaggaggcctgagcgagtcccggctgcctgcccg 224 ||||||| | | |||||||| |||||||||||||| ||| |||| |||| |||||| Sbjct: 186 atttatcgactatttggatgggaatacaggaggcctgaaagagccccgcctgcttgcccg 245 Query: 225 ttcaagcctgcagcaagcaagactgaaggtgca 257 || |||||||| |||| || | |||||||||| Sbjct: 246 tttaagcctgcggcaaagaacaatgaaggtgca 278
>dbj|AK070498.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051H09, full insert sequence Length = 591 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/153 (83%) Strand = Plus / Plus Query: 105 ctcttcctcatccccttcgtcaacgcgctcccctacctcttcgacctcctcctcagcaag 164 |||||| | |||||| |||||||||| ||||||| |||||| ||||| ||||||||||| Sbjct: 127 ctcttcttgatccccgtcgtcaacgccctccccttgctcttccacctcatcctcagcaag 186 Query: 165 gtttatcgcatgctcggatgggagtacaggaggcctgagcgagtcccggctgcctgcccg 224 ||||||| | | |||||||| |||||||||||||| ||| |||| |||| |||||| Sbjct: 187 atttatcgactatttggatgggaatacaggaggcctgaaagagccccgcctgcttgcccg 246 Query: 225 ttcaagcctgcagcaagcaagactgaaggtgca 257 || |||||||| |||| || | |||||||||| Sbjct: 247 tttaagcctgcggcaaagaacaatgaaggtgca 279
>gb|AY105582.1| Zea mays PCO097726 mRNA sequence Length = 740 Score = 91.7 bits (46), Expect = 3e-15 Identities = 133/162 (82%) Strand = Plus / Plus Query: 77 catggtgtgcgtggcgtgcctgatcccgctcttcctcatccccttcgtcaacgcgctccc 136 |||||| ||||| ||||||||| | ||||||||||| ||||| | |||||||| ||||| Sbjct: 223 catggtctgcgtcgcgtgcctgctgccgctcttcctgatcccggtggtcaacgccctccc 282 Query: 137 ctacctcttcgacctcctcctcagcaaggtttatcgcatgctcggatgggagtacaggag 196 |||||| |||||||| || |||||||||| ||||| | | |||||||||||| |||| Sbjct: 283 ttacctcatcgacctcatcatcagcaaggtgtatcggctatttggatgggagtaccggag 342 Query: 197 gcctgagcgagtcccggctgcctgcccgttcaagcctgcagc 238 ||||| ||||||| |||| || || | |||||||||||| Sbjct: 343 acctgaaagagtcccacctgcatgtccatacaagcctgcagc 384
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 180 ggatgggagtacaggaggcctgagcgagtcccggctgcctgcccgttcaagcctgcagca 239 |||||||| |||||||||||||| ||| |||| |||| |||||||| |||||||| ||| Sbjct: 35392652 ggatgggaatacaggaggcctgaaagagccccgcctgcttgcccgtttaagcctgcggca 35392593 Query: 240 a 240 | Sbjct: 35392592 a 35392592
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 180 ggatgggagtacaggaggcctgagcgagtcccggctgcctgcccgttcaagcctgcagca 239 |||||||| |||||||||||||| ||| |||| |||| |||||||| |||||||| ||| Sbjct: 4173 ggatgggaatacaggaggcctgaaagagccccgcctgcttgcccgtttaagcctgcggca 4114 Query: 240 a 240 | Sbjct: 4113 a 4113
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 180 ggatgggagtacaggaggcctgagcgagtcccggctgcctgcccgttcaagcctgcagca 239 |||||||| |||||||||||||| ||| |||| |||| |||||||| |||||||| ||| Sbjct: 53200 ggatgggaatacaggaggcctgaaagagccccgcctgcttgcccgtttaagcctgcggca 53141 Query: 240 a 240 | Sbjct: 53140 a 53140
>gb|AC024382.7| Homo sapiens chromosome 8, clone RP11-351C8, complete sequence Length = 193599 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 397 agaaataatcaatgtaagaatgt 419 ||||||||||||||||||||||| Sbjct: 134198 agaaataatcaatgtaagaatgt 134220
>emb|CR356243.16| Zebrafish DNA sequence from clone CH211-209O4 in linkage group 6, complete sequence Length = 216472 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 487 tgtgtgttttgtagtactatgtg 509 ||||||||||||||||||||||| Sbjct: 156470 tgtgtgttttgtagtactatgtg 156492
>emb|CR759738.1| Human DNA sequence from clone XX-NCIH2171_16J17, complete sequence Length = 108579 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 397 agaaataatcaatgtaagaatgt 419 ||||||||||||||||||||||| Sbjct: 2884 agaaataatcaatgtaagaatgt 2906
>emb|CR626873.1| Human DNA sequence from clone XX-NCIH2171_5J24, complete sequence Length = 93411 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 397 agaaataatcaatgtaagaatgt 419 ||||||||||||||||||||||| Sbjct: 21360 agaaataatcaatgtaagaatgt 21382
>gb|AC013829.13| Homo sapiens chromosome 8, clone RP11-23D17, complete sequence Length = 147584 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 474 ggttttgtgtgcatgtgtgtttt 496 ||||||||||||||||||||||| Sbjct: 75080 ggttttgtgtgcatgtgtgtttt 75102
>emb|CT954316.4| N.leucogenys DNA sequence from clone CH271-411O5, complete sequence Length = 178585 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 477 tttgtgtgcatgtgtgttttgt 498 |||||||||||||||||||||| Sbjct: 125489 tttgtgtgcatgtgtgttttgt 125468
>emb|CT954317.3| N.leucogenys DNA sequence from clone CH271-467F13, complete sequence Length = 114392 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 477 tttgtgtgcatgtgtgttttgt 498 |||||||||||||||||||||| Sbjct: 49969 tttgtgtgcatgtgtgttttgt 49990
>gb|AF111103.1|MMHC322F16 Mouse major histocompatibility complex region containing the Q region of class I Length = 159179 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 476 ttttgtgtgcatgtgtgttttg 497 |||||||||||||||||||||| Sbjct: 149793 ttttgtgtgcatgtgtgttttg 149814
>gb|AC124177.2| Mus musculus BAC clone RP23-193C10 from 3, complete sequence Length = 217266 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 234 gcagcaagcaagactgaaggtgcagcaggc 263 ||||||||||||||| |||||| ||||||| Sbjct: 88545 gcagcaagcaagacttaaggtgaagcaggc 88574
>gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, complete sequence Length = 236895 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 476 ttttgtgtgcatgtgtgttttg 497 |||||||||||||||||||||| Sbjct: 171851 ttttgtgtgcatgtgtgttttg 171830
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 503 ctatgtgccttgatctacatgtactctact 532 |||||| ||||||||||||| ||||||||| Sbjct: 15266149 ctatgtaccttgatctacatatactctact 15266178 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 ctcccctacctcttcgacctcctc 155 |||||||||||||||| ||||||| Sbjct: 17422588 ctcccctacctcttcgtcctcctc 17422611
>gb|AC106757.2| Homo sapiens chromosome 5 clone RP11-205J9, complete sequence Length = 122504 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 472 ctggttttgtgtgcatgtgtgt 493 |||||||||||||||||||||| Sbjct: 57091 ctggttttgtgtgcatgtgtgt 57070
>gb|AC087216.1|AC087216 Mus musculus strain 129svj chromosome 17 clone GS1-11M9, complete sequence Length = 226594 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 476 ttttgtgtgcatgtgtgttttg 497 |||||||||||||||||||||| Sbjct: 195050 ttttgtgtgcatgtgtgttttg 195071
>gb|AC140260.3| Mus musculus BAC clone RP23-311O16 from 6, complete sequence Length = 252791 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 476 ttttgtgtgcatgtgtgttttg 497 |||||||||||||||||||||| Sbjct: 153886 ttttgtgtgcatgtgtgttttg 153907
>gb|AC006196.3|AC006196 Homo sapiens, clone hRPK.1_A_1, complete sequence Length = 181949 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 477 tttgtgtgcatgtgtgttttgt 498 |||||||||||||||||||||| Sbjct: 82999 tttgtgtgcatgtgtgttttgt 82978
>emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa0036B12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151541 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 503 ctatgtgccttgatctacatgtactctact 532 |||||| ||||||||||||| ||||||||| Sbjct: 41542 ctatgtaccttgatctacatatactctact 41571
>gb|AC152950.2| Mus musculus 10 BAC RP23-138J18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 181465 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 477 tttgtgtgcatgtgtgttttgt 498 |||||||||||||||||||||| Sbjct: 88097 tttgtgtgcatgtgtgttttgt 88118
>gb|AC191881.4| Rhesus Macaque BAC CH250-238L1 () complete sequence Length = 173160 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 tttgtgtgcatgtgtgttttg 497 ||||||||||||||||||||| Sbjct: 35049 tttgtgtgcatgtgtgttttg 35069
>gb|DQ372700.1| Serpula lacrymans clone SL6 microsatellite sequence Length = 243 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ctcttcctcatccccttcgtc 125 ||||||||||||||||||||| Sbjct: 67 ctcttcctcatccccttcgtc 47
>ref|XM_001092175.1| PREDICTED: Macaca mulatta similar to T-box 19 (LOC699312), mRNA Length = 2310 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 ttttgtgtgcatgtgtgtttt 496 ||||||||||||||||||||| Sbjct: 2153 ttttgtgtgcatgtgtgtttt 2133
>gb|AC177794.2| Mus musculus chromosome 1, clone wi1-176I16, complete sequence Length = 40705 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 tggttttgtgtgcatgtgtgt 493 ||||||||||||||||||||| Sbjct: 37810 tggttttgtgtgcatgtgtgt 37790
>ref|XM_867568.1| PREDICTED: Bos taurus similar to G-protein coupled purinergic receptor P2Y8 (LOC615698), mRNA Length = 1131 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 gctcttcctcatccccttcgt 124 ||||||||||||||||||||| Sbjct: 663 gctcttcctcatccccttcgt 683
>ref|XM_596307.2| PREDICTED: Bos taurus similar to G-protein coupled purinergic receptor P2Y8 (LOC518123), mRNA Length = 1234 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 gctcttcctcatccccttcgt 124 ||||||||||||||||||||| Sbjct: 766 gctcttcctcatccccttcgt 786
>gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosome 7, complete sequence Length = 163841 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgta 499 ||||||||||||||||||||| Sbjct: 48895 tgtgtgcatgtgtgttttgta 48915
>gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence Length = 204007 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 tttgtgtgcatgtgtgttttg 497 ||||||||||||||||||||| Sbjct: 102266 tttgtgtgcatgtgtgttttg 102286
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE Length = 114811 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 ttgaatgtaacaatggtgttt 459 ||||||||||||||||||||| Sbjct: 112063 ttgaatgtaacaatggtgttt 112043
>gb|AC105314.5| Homo sapiens BAC clone RP11-312H15 from 4, complete sequence Length = 193665 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 tatataatcaaaattgcaact 395 ||||||||||||||||||||| Sbjct: 59649 tatataatcaaaattgcaact 59629
>emb|AL158069.16| Human DNA sequence from clone RP13-57D9 on chromosome Xq11.2-13.2 Contains the gene for TED protein (TED), the 5' end of the ED1 gene for ectodermal dysplasia 1, anhidrotic, two novel genes and three CpG islands, complete sequence Length = 186538 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 ttttgtgtgcatgtgtgtttt 496 ||||||||||||||||||||| Sbjct: 62549 ttttgtgtgcatgtgtgtttt 62529
>emb|AL138958.18| Human DNA sequence from clone RP11-206I15 on chromosome 13 Contains the 3' end of a novel gene (KIAA0410), a transcription elongation factor B (SIII) polypeptide 2 (18kD, elongin B) (TCEB2) pseudogene, the 5' end of the ATP8A2 gene for aminophospholipid transporter-like ATPase Class I type 8A member 2 and three CpG islands, complete sequence Length = 162973 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 tggttttgtgtgcatgtgtgt 493 ||||||||||||||||||||| Sbjct: 18026 tggttttgtgtgcatgtgtgt 18006
>emb|AL139009.14| Human DNA sequence from clone RP5-976H8 on chromosome 10p14-15.3, complete sequence Length = 172657 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtgt 493 ||||||||||||||||||||| Sbjct: 171326 tggttttgtgtgcatgtgtgt 171346
>emb|AL611951.11| Mouse DNA sequence from clone RP23-265O1 on chromosome 13 Contains a novel gene, complete sequence Length = 191715 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 ttgtgtgcatgtgtgttttgt 498 ||||||||||||||||||||| Sbjct: 72730 ttgtgtgcatgtgtgttttgt 72750
>gb|AC124829.10| Mus musculus chromosome 1, clone RP24-131G15, complete sequence Length = 189923 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 tcaatgtaagaatgtatactt 425 ||||||||||||||||||||| Sbjct: 136530 tcaatgtaagaatgtatactt 136550
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 tcttcctcatccccttcgtca 126 ||||||||||||||||||||| Sbjct: 5339984 tcttcctcatccccttcgtca 5340004
>gb|AC109199.10| Mus musculus chromosome 1, clone RP23-29D20, complete sequence Length = 194339 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtgt 493 ||||||||||||||||||||| Sbjct: 185075 tggttttgtgtgcatgtgtgt 185095
>gb|AC123915.12| Mus musculus chromosome 1, clone RP23-108H22, complete sequence Length = 177375 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 tcaatgtaagaatgtatactt 425 ||||||||||||||||||||| Sbjct: 173996 tcaatgtaagaatgtatactt 173976
>emb|AL672215.11| Mouse DNA sequence from clone RP23-162B19 on chromosome X, complete sequence Length = 196276 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 gttttgtgtgcatgtgtgttt 495 ||||||||||||||||||||| Sbjct: 145023 gttttgtgtgcatgtgtgttt 145043
>emb|AL512357.4|CNS07EF6 Human chromosome 14 DNA sequence BAC R-260M19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174612 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 gttttgtgtgcatgtgtgttt 495 ||||||||||||||||||||| Sbjct: 51887 gttttgtgtgcatgtgtgttt 51907
>dbj|AP000347.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB113H7 Length = 104660 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 tttgtgtgcatgtgtgttttg 497 ||||||||||||||||||||| Sbjct: 69962 tttgtgtgcatgtgtgttttg 69942
>emb|CT027756.10| Zebrafish DNA sequence from clone DKEY-95F11 in linkage group 23, complete sequence Length = 112354 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 ttttgtgtgcatgtgtgttt 495 |||||||||||||||||||| Sbjct: 47141 ttttgtgtgcatgtgtgttt 47122
>gb|AC191762.1| Pan troglodytes BAC clone CH251-310J3 from chromosome 7, complete sequence Length = 146500 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 gttttgtgtgcatgtgtgttttgt 498 |||||||||| ||||||||||||| Sbjct: 30321 gttttgtgtgtatgtgtgttttgt 30344
>emb|CT025717.13| Zebrafish DNA sequence from clone CH211-33H21 in linkage group 4, complete sequence Length = 166825 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 72508 tgtgtgcatgtgtgttttgt 72527
>gb|AC185985.3| Pan troglodytes BAC clone CH251-409M14 from chromosome unknown, complete sequence Length = 148688 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 tttgtgtgcatgtgtgtttt 496 |||||||||||||||||||| Sbjct: 129540 tttgtgtgcatgtgtgtttt 129521
>ref|NM_120426.2| Arabidopsis thaliana unknown protein (AT5G03460) mRNA, complete cds Length = 544 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gctcggatgggagtacagga 195 |||||||||||||||||||| Sbjct: 209 gctcggatgggagtacagga 228
>gb|AC115006.12| Mus musculus chromosome 8, clone RP24-184D21, complete sequence Length = 163874 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 tttgtgtgcatgtgtgtttt 496 |||||||||||||||||||| Sbjct: 92941 tttgtgtgcatgtgtgtttt 92922
>gb|AC102739.7| Mus musculus chromosome 5, clone RP24-309H3, complete sequence Length = 191542 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 136407 tgtgtgcatgtgtgttttgt 136426
>gb|AC023489.8| Trypanosoma brucei chromosome 4 clone RPCI93-26G5, complete sequence Length = 79024 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 19421 tgtgtgcatgtgtgttttgt 19402
>gb|AC112964.8| Mus musculus chromosome 8, clone RP24-82M4, complete sequence Length = 193076 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 37182 tggttttgtgtgcatgtgtg 37201
>gb|AC141477.4| Mus musculus BAC clone RP23-386J14 from chromosome 10, complete sequence Length = 213720 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 ttttgtgtgcatgtgtgttt 495 |||||||||||||||||||| Sbjct: 159115 ttttgtgtgcatgtgtgttt 159096
>gb|AC147572.4| Pan troglodytes BAC clone CH251-412D24 from Y, complete sequence Length = 166356 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 77482 tggttttgtgtgcatgtgtg 77463
>gb|AC147711.2| Pan troglodytes BAC clone CH251-503O1 from Y, complete sequence Length = 154081 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 142423 tggttttgtgtgcatgtgtg 142404
>gb|AC147566.2| Mus musculus BAC clone RP23-106L10 from chromosome 14, complete sequence Length = 174050 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 31688 tgtgtgcatgtgtgttttgt 31707
>gb|AC125192.3| Mus musculus BAC clone RP23-266B4 from chromosome 8, complete sequence Length = 199459 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ttttgtgtgcatgtgtgttt 495 |||||||||||||||||||| Sbjct: 170550 ttttgtgtgcatgtgtgttt 170569
>gb|AC147608.1| Pan troglodytes BAC clone CH251-506P22 from Y, complete sequence Length = 195158 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 74978 tggttttgtgtgcatgtgtg 74997
>gb|AC147114.2| Pan troglodytes BAC clone CH251-548O14 from Y, complete sequence Length = 229006 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 13488 tggttttgtgtgcatgtgtg 13469
>gb|AC124472.4| Mus musculus BAC clone RP24-83E15 from chromosome 7, complete sequence Length = 204477 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 100 tcccgctcttcctca-tccccttcgtca 126 ||||||||||||||| |||||||||||| Sbjct: 59565 tcccgctcttcctcattccccttcgtca 59592
>gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome 1, complete sequence Length = 154695 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 79656 tgtgtgcatgtgtgttttgt 79675
>gb|AC122921.2| Mus musculus BAC clone RP23-34J4 from 7, complete sequence Length = 176637 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 100 tcccgctcttcctca-tccccttcgtca 126 ||||||||||||||| |||||||||||| Sbjct: 12020 tcccgctcttcctcattccccttcgtca 11993
>gb|AC146515.2| Pan troglodytes BAC clone CH251-113M4 from Y, complete sequence Length = 183460 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 126699 tggttttgtgtgcatgtgtg 126718
>gb|AC118240.8| Mus musculus chromosome 16, clone RP23-186J5, complete sequence Length = 222869 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ctacatgtactctactaatt 536 |||||||||||||||||||| Sbjct: 172887 ctacatgtactctactaatt 172906
>gb|AC145866.3| Pan troglodytes BAC clone RP43-21B7 from 7, complete sequence Length = 189814 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 82700 tgtgtgcatgtgtgttttgt 82719
>gb|AC142348.1| Pan troglodytes BAC clone RP43-5I10 from Y, complete sequence Length = 183293 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 120504 tggttttgtgtgcatgtgtg 120485
>dbj|BS000677.1| Pan troglodytes chromosome Y clone: PTB-391J06, complete sequence Length = 171013 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 116474 tggttttgtgtgcatgtgtg 116493
>gb|AC162295.3| Mus musculus chromosome 1, clone RP24-232K22, complete sequence Length = 180957 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 148352 tggttttgtgtgcatgtgtg 148333
>gb|AC055748.21| Homo sapiens 3 BAC RP11-402J7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149897 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 1916 tgtgtgcatgtgtgttttgt 1935
>gb|AC117509.9| Homo sapiens 3 BAC RP11-31B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 113201 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 113165 tgtgtgcatgtgtgttttgt 113184
>gb|AC126470.10| Homo sapiens 12 BAC RP11-625E23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 83835 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 tttgtgtgcatgtgtgtttt 496 |||||||||||||||||||| Sbjct: 42884 tttgtgtgcatgtgtgtttt 42865
>gb|AY133806.1| Arabidopsis thaliana clone U10365 unknown protein (At5g03460) mRNA, complete cds Length = 301 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gctcggatgggagtacagga 195 |||||||||||||||||||| Sbjct: 99 gctcggatgggagtacagga 118
>gb|AY045989.1| Arabidopsis thaliana unknown protein (At5g03460) mRNA, complete cds Length = 512 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gctcggatgggagtacagga 195 |||||||||||||||||||| Sbjct: 183 gctcggatgggagtacagga 202
>gb|AC151908.8| Mus musculus BAC clone RP23-109A22 from chromosome 8, complete sequence Length = 233606 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 ttttgtgtgcatgtgtgttt 495 |||||||||||||||||||| Sbjct: 226335 ttttgtgtgcatgtgtgttt 226316
>dbj|AK143553.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F420001F06 product:eukaryotic translation initiation factor 2, subunit 2 (beta), full insert sequence Length = 4106 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 gttttgtgtgcatgtgtgttttgt 498 |||||||||| ||||||||||||| Sbjct: 1721 gttttgtgtgtatgtgtgttttgt 1744
>gb|AC130680.13| Mus musculus chromosome 7, clone RP23-180G17, complete sequence Length = 136680 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ttttgtgtgcatgtgtgttt 495 |||||||||||||||||||| Sbjct: 90599 ttttgtgtgcatgtgtgttt 90618
>dbj|AK164131.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530045F09 product:unclassifiable, full insert sequence Length = 2600 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 1269 tgtgtgcatgtgtgttttgt 1288
>gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, complete sequence Length = 188276 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 176093 tgtgtgcatgtgtgttttgt 176112
>gb|AC004844.1| Homo sapiens PAC clone RP4-613I23 from 7p11-p13, complete sequence Length = 141895 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 56102 tgtgtgcatgtgtgttttgt 56121
>gb|AC110611.3| Homo sapiens BAC clone RP11-345F18 from 4, complete sequence Length = 195155 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tgtgtttatataatcaaaat 388 |||||||||||||||||||| Sbjct: 40906 tgtgtttatataatcaaaat 40887
>emb|CR392026.10| Zebrafish DNA sequence from clone DKEY-153N9 in linkage group 2, complete sequence Length = 191490 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 172591 tgtgtgcatgtgtgttttgt 172572
>emb|AL772143.31| Zebrafish DNA sequence from clone CH211-158B22 in linkage group 20, complete sequence Length = 73696 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 42987 tgtgtgcatgtgtgttttgt 42968
>gb|AC093154.2| Homo sapiens chromosome 1 clone RP3-445O10, complete sequence Length = 145658 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 24988 tggttttgtgtgcatgtgtg 25007
>gb|AC093561.2| Homo sapiens chromosome 1 clone RP11-401A10, complete sequence Length = 184330 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ttgtgtgcatgtgtgttttg 497 |||||||||||||||||||| Sbjct: 62160 ttgtgtgcatgtgtgttttg 62179
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 gttttgtgtgcatgtgtgtt 494 |||||||||||||||||||| Sbjct: 2301094 gttttgtgtgcatgtgtgtt 2301075
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 tgtttatataatcaaaattg 390 |||||||||||||||||||| Sbjct: 79217 tgtttatataatcaaaattg 79236
>gb|AC008631.6| Homo sapiens chromosome 5 clone CTB-163B16, complete sequence Length = 107857 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gcaagactgaaggtgcagca 260 |||||||||||||||||||| Sbjct: 29593 gcaagactgaaggtgcagca 29612
>gb|AC096886.2| Homo sapiens chromosome 3 clone RP11-3F4, complete sequence Length = 163114 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 33015 tgtgtgcatgtgtgttttgt 33034
>gb|AC158618.5| Mus musculus 10 BAC RP23-280M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 235639 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ttttgtgtgcatgtgtgttt 495 |||||||||||||||||||| Sbjct: 191933 ttttgtgtgcatgtgtgttt 191952
>emb|AL021921.1|HS357I16 Human DNA sequence from clone RP3-357I16 on chromosome 1p36.13, complete sequence Length = 134506 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 ggttttgtgtgcatgtgtgt 493 |||||||||||||||||||| Sbjct: 7240 ggttttgtgtgcatgtgtgt 7221
>gb|AC008105.32| Homo sapiens chromosome 17, clone CTD-2020K17, complete sequence Length = 96875 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 tttgtgtgcatgtgtgtttt 496 |||||||||||||||||||| Sbjct: 85180 tttgtgtgcatgtgtgtttt 85199
>gb|AC020905.9| Homo sapiens chromosome 19 clone CTB-70G10, complete sequence Length = 141513 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 taagaaataatcaatgtaagaatg 418 ||||||||||||| |||||||||| Sbjct: 28492 taagaaataatcactgtaagaatg 28515
>gb|AY084932.1| Arabidopsis thaliana clone 12197 mRNA, complete sequence Length = 538 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gctcggatgggagtacagga 195 |||||||||||||||||||| Sbjct: 209 gctcggatgggagtacagga 228
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 tgtttatataatcaaaattg 390 |||||||||||||||||||| Sbjct: 79217 tgtttatataatcaaaattg 79236
>emb|BX883046.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 5/11 Length = 349047 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 318657 tgtgtgcatgtgtgttttgt 318676
>emb|AL935165.5| Zebrafish DNA sequence from clone CH211-198D18 in linkage group 4 Contains the cugbp2 gene for CUG triplet repeat, RNA binding protein 2, the 5' end of a novel gene and a CpG island, complete sequence Length = 182748 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 176597 tgtgtgcatgtgtgttttgt 176616
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gctcggatgggagtacagga 195 |||||||||||||||||||| Sbjct: 78918 gctcggatgggagtacagga 78937
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 62324 tgtgtgcatgtgtgttttgt 62343
>emb|AL929545.8| Mouse DNA sequence from clone RP23-306I3 on chromosome 11 Contains the 3' end of a novel gene, complete sequence Length = 198821 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 ggttttgtgtgcatgtgtgt 493 |||||||||||||||||||| Sbjct: 191310 ggttttgtgtgcatgtgtgt 191291
>gb|AC135782.4| Homo sapiens chromosome 16 clone CTD-2555A7, complete sequence Length = 163550 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 gactgaaggtgcagcaggcg 264 |||||||||||||||||||| Sbjct: 133952 gactgaaggtgcagcaggcg 133971
>gb|AC074182.6| Homo sapiens BAC clone RP11-553G13 from 2, complete sequence Length = 190436 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 64167 tggttttgtgtgcatgtgtg 64186
>gb|AC151800.2| Pan troglodytes BAC clone CH251-261E10 from chromosome y, complete sequence Length = 149719 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 24897 tggttttgtgtgcatgtgtg 24916
>gb|AC148933.3| Pan troglodytes BAC clone CH251-571K7 from chromosome y, complete sequence Length = 171231 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 121108 tggttttgtgtgcatgtgtg 121089
>gb|AC011743.9| Homo sapiens BAC clone RP11-299O14 from 2, complete sequence Length = 114495 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 gttgtgtttatataatcaaaattg 390 |||||||||||||||| ||||||| Sbjct: 16608 gttgtgtttatataataaaaattg 16631
>emb|BX323801.8| Zebrafish DNA sequence from clone CH211-103E16, complete sequence Length = 181565 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 ttatataatcaaaattgcaa 393 |||||||||||||||||||| Sbjct: 44581 ttatataatcaaaattgcaa 44600
>emb|CR626861.1| Mouse DNA sequence from clone RP23-31D7 on chromosome 2, complete sequence Length = 25524 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 gttttgtgtgcatgtgtgtt 494 |||||||||||||||||||| Sbjct: 18236 gttttgtgtgcatgtgtgtt 18255
>gb|AC007359.3|AC007359 Homo sapiens BAC clone RP11-66M18 from Y, complete sequence Length = 100627 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 20689 tggttttgtgtgcatgtgtg 20708
>gb|AC016752.2|AC016752 Homo sapiens BAC clone RP11-506M9 from Y, complete sequence Length = 166436 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 60198 tggttttgtgtgcatgtgtg 60217
>gb|AC008175.2|AC008175 Homo sapiens BAC clone RP11-427G18 from Y, complete sequence Length = 205237 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 83628 tggttttgtgtgcatgtgtg 83609
>gb|AC007965.3|AC007965 Homo sapiens BAC clone RP11-245K4 from Y, complete sequence Length = 182083 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 119799 tggttttgtgtgcatgtgtg 119780
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 gttttgtgtgcatgtgtgtt 494 |||||||||||||||||||| Sbjct: 22895 gttttgtgtgcatgtgtgtt 22876
>gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete sequence Length = 171949 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 aagaaataatcaatgtaaga 415 |||||||||||||||||||| Sbjct: 52258 aagaaataatcaatgtaaga 52239
>ref|XM_953098.1| Neurospora crassa OR74A hypothetical protein (NCU07740.1) partial mRNA Length = 1893 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cctcttcgacctcctcctca 159 |||||||||||||||||||| Sbjct: 1672 cctcttcgacctcctcctca 1653
>emb|BX088542.7| Zebrafish DNA sequence from clone CH211-183F16, complete sequence Length = 151598 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 taattgtttgtgtaatattt 551 |||||||||||||||||||| Sbjct: 135862 taattgtttgtgtaatattt 135843
>emb|BX830330.1|CNS0A05G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 497 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gctcggatgggagtacagga 195 |||||||||||||||||||| Sbjct: 174 gctcggatgggagtacagga 193
>emb|BX833076.1|CNS09YZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 483 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gctcggatgggagtacagga 195 |||||||||||||||||||| Sbjct: 160 gctcggatgggagtacagga 179
>emb|BX247876.6| Zebrafish DNA sequence from clone CH211-271B14 in linkage group 5, complete sequence Length = 176246 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 109343 tgtgtgcatgtgtgttttgt 109362
>gb|AC154856.2| Mus musculus BAC clone RP23-20C2 from 13, complete sequence Length = 248953 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 tttgtgtgcatgtgtgtttt 496 |||||||||||||||||||| Sbjct: 35225 tttgtgtgcatgtgtgtttt 35244
>gb|U95738.1|HSU95738 Human chromosome 16p13.11 BAC clone CIT987SK-29B12 complete sequence Length = 171368 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 ggttttgtgtgcatgtgtgt 493 |||||||||||||||||||| Sbjct: 138683 ggttttgtgtgcatgtgtgt 138702
>gb|AC122236.5| Mus musculus BAC clone RP23-141I22 from 8, complete sequence Length = 214447 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ttttgtgtgcatgtgtgttt 495 |||||||||||||||||||| Sbjct: 61721 ttttgtgtgcatgtgtgttt 61740
>gb|AC171680.5| Mus musculus chromosome 7, clone RP23-146B24, complete sequence Length = 200031 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ttttgtgtgcatgtgtgttt 495 |||||||||||||||||||| Sbjct: 87000 ttttgtgtgcatgtgtgttt 87019
>gb|AC117681.20| Mus musculus chromosome 1, clone RP23-436A22, complete sequence Length = 198868 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 tggttttgtgtgcatgtgtg 492 |||||||||||||||||||| Sbjct: 155393 tggttttgtgtgcatgtgtg 155412
>gb|AC007786.1|AC007786 Homo sapiens chromosome 19, BAC 41855 (CIT-B-32o4), complete sequence Length = 229061 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 gttttgtgtgcatgtgtgttttgt 498 ||||||||||| |||||||||||| Sbjct: 213340 gttttgtgtgcttgtgtgttttgt 213363
>emb|AL732291.11| Mouse DNA sequence from clone RP23-48I14 on chromosome X, complete sequence Length = 210192 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 76669 tgtgtgcatgtgtgttttgt 76650
>gb|AC133655.4| Mus musculus BAC clone RP24-364H7 from 8, complete sequence Length = 177145 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 tttgtgtgcatgtgtgtttt 496 |||||||||||||||||||| Sbjct: 164020 tttgtgtgcatgtgtgtttt 164039
>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06, complete sequence Length = 145517 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 tgtttatataatcaaaattg 390 |||||||||||||||||||| Sbjct: 10466 tgtttatataatcaaaattg 10485
>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129619 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ctcccctacctcttcgacctcctc 155 |||||||||||||||| ||||||| Sbjct: 109818 ctcccctacctcttcgtcctcctc 109795
>gb|AC147641.3| Mus musculus BAC clone RP23-43L22 from 14, complete sequence Length = 247999 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tgtgtgcatgtgtgttttgt 498 |||||||||||||||||||| Sbjct: 149926 tgtgtgcatgtgtgttttgt 149945
>emb|AL732528.12| Mouse DNA sequence from clone RP23-218B17 on chromosome 2, complete sequence Length = 166465 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ttttgtgtgcatgtgtgttt 495 |||||||||||||||||||| Sbjct: 151096 ttttgtgtgcatgtgtgttt 151115 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 96,472,160 Number of extensions: 5391544 Number of successful extensions: 172230 Number of sequences better than 10.0: 131 Number of HSP's gapped: 172226 Number of HSP's successfully gapped: 132 Length of query: 572 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 550 Effective length of database: 18,508,616,841 Effective search space: 10179739262550 Effective search space used: 10179739262550 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
