ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf102c12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001050420.1| Oryza sativa (japonica cultivar-group) Os01g0682200 (Os01g0682200) mRNA, complete cds Length = 2130 Score = 743 bits (375), Expect = 0.0 Identities = 609/687 (88%) Strand = Plus / Plus Query: 1096 tgatggtattgcagaaaaggctgaatttacggatttcaaacgtgctggaacgatggccgc 1155 |||||| | |||||||||||| ||| ||| || |||||||||||||||||| ||||| || Sbjct: 762 tgatggcactgcagaaaaggcagaacttatggctttcaaacgtgctggaacaatggctgc 821 Query: 1156 tgctctcatatttaaagttggggaaactaggaagtatggtgatagagatagtgttacaat 1215 ||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||| || || Sbjct: 822 tgcactcatatttaaagttggagaaaccaggaaatatggtgatagagatagtgtcacgat 881 Query: 1216 gtatgcggaggcatctaatggccaaatgccaaacttggaccttctgaatgtggtgcacta 1275 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 882 gtatgcagaggcatctaatggccaaatgccaaacttggaccttctgaatgtggtgcacta 941 Query: 1276 tctagctgttcatagacaaggttttcgtgtgaacattgagacaattagttcgttgttgag 1335 | ||||||||||||||||||||||||| ||||| | |||||| ||| ||| |||||||| Sbjct: 942 tttagctgttcatagacaaggttttcgcgtgaatgtcgagacatttaattccttgttgag 1001 Query: 1336 ttctgcatggcttagggctattgctgaagtgattcatactcttgggagtatattgagaaa 1395 ||| |||||||||||| |||||||||||| |||| | |||||||||| | |||||||| Sbjct: 1002 ctcttcatggcttagggttattgctgaagtatttcaaaatcttgggagtttgttgagaaa 1061 Query: 1396 aataaatcctgactggaagcttgatattacagcctctgattatgtggaggggactgccaa 1455 |||||||||||||||||||||||| | || | |||||||||||||||| ||||| || Sbjct: 1062 aataaatcctgactggaagcttgacgtgaccgttcctgattatgtggagggtactgcaaa 1121 Query: 1456 ccttgctagctctatttataatcaggctcttggagtgcccaccggatctcatggcgcgtt 1515 ||||||||| ||||| ||||| |||||||||||||||||||| || |||||||| || || Sbjct: 1122 ccttgctagttctatgtataaccaggctcttggagtgcccacaggttctcatggtgcttt 1181 Query: 1516 ccgtgactatcaagttgatgccgtttctttagaattttcacctacattttatatcagaaa 1575 ||||||||||||||||||||| ||||||||||||||| |||| ||||| || | | ||| Sbjct: 1182 ccgtgactatcaagttgatgcagtttctttagaatttgcaccagcatttcatcttaaaaa 1241 Query: 1576 tgagaatgccaaatcatcatttcttgtaaggggtggaaggttacttgaaggggtggtacg 1635 |||||||| ||||| ||||||||| | ||||||||||||||| |||||||||||| || Sbjct: 1242 cgagaatgctaaatcttcatttcttctcaggggtggaaggttaactgaaggggtggtgcg 1301 Query: 1636 ttctgtgaataacctgctcgagaagttccatcaatcctttttcctatatttcctcacagc 1695 ||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 1302 ctctgtaaataacctgctcgagaagttccatcaatcgtttttcctgtatttccttacagc 1361 Query: 1696 tccgagcaagtttatttcagttggtgtctatatgattccttttgcacttcttgtggcacc 1755 || |||||||| |||||||||||||| ||||||||||| |||||| | || ||||||| Sbjct: 1362 cccaagcaagttcatttcagttggtgtatatatgattccgtttgcattactcctggcacc 1421 Query: 1756 cctcccaatagttgctgctgctcttgc 1782 ||||||||||||||||||||||||||| Sbjct: 1422 cctcccaatagttgctgctgctcttgc 1448 Score = 434 bits (219), Expect = e-118 Identities = 557/669 (83%), Gaps = 3/669 (0%) Strand = Plus / Plus Query: 407 ccgaagccgcggctcatcgttcgccttgggatattcctcgcttctcaccacgtcctcttc 466 ||||||||||| ||||| || ||||| ||| |||||||||| || |||||| | |||||| Sbjct: 31 ccgaagccgcgcctcattgtccgcctcggggtattcctcgcgtcgcaccacatactcttc 90 Query: 467 agcgtgctgtgctgttccgcgggcattatcgcactcctcttcctcccatcacttgcaaag 526 |||| |||| ||| | |||||||| ||||| |||||||||||||| || ||||| ||| Sbjct: 91 agcgctgtgtgttgtacggcgggcataatcgcgctcctcttcctcccttcgcttgccaag 150 Query: 527 aacacatacctctcggagaatgctcttatacctggctctgcaaatccattattctccagc 586 ||||| ||||| || ||||| ||||||||||| |||||||| ||| ||||||| || | Sbjct: 151 aacacgtacctatcagagaacgctcttatacccggctctgcgaatacattattttctact 210 Query: 587 gaggatgtcacggaagctaacaagtttatcaaaggaattgaagctgcagctggggaatca 646 ||||||||| |||||| |||| ||| || ||||||||||||||| |||||||||| Sbjct: 211 gaggatgtccaggaagcaaacagatttgcgaagggaattgaagctgcaattggggaatca 270 Query: 647 agaggcggaat---ggaaatgccaaaattcatagtgcaacaaatgaaagatctgggtgca 703 ||||| |||| ||| || ||||||||||||| ||||||| ||| ||||||| ||| Sbjct: 271 agaggtggaacaacggagatcccaaaattcatagcacaacaaacaaaaaatctgggagca 330 Query: 704 gaagtgtgttaccacaaattcctccctcatagcaagcattttcatcctctgaagttcttc 763 ||||||| |||||| | ||||||||| | ||||| ||||||||||||||||||||| Sbjct: 331 gaagtgtattaccatgagttcctccctgacagcaaatgttttcatcctctgaagttcttt 390 Query: 764 acttccatgacaaacgatttggcggttcgacccaatggcacctattccaactctggaaca 823 || ||||||||||| || |||| | ||||||||| ||||| |||||| ||| | Sbjct: 391 acatccatgacaaataatatggcagccaaacccaatggaacctacaccaactttggcatt 450 Query: 824 aatacaattggcattatacgagctcctaggggtgatggaaaagaagctatagtattggtt 883 || ||| ||||||||||||| ||||| | |||||||| |||||||| || ||| ||||| Sbjct: 451 aacacagttggcattatacgggctccacgaggtgatggcaaagaagcaattgtactggtt 510 Query: 884 actccttataatcctcagaaagttcaggcaaatgaagtattatcactcgcacttggtttc 943 |||||||||||| ||||||||||| |||||||| |||||||||| |||||||| ||| Sbjct: 511 actccttataattctcagaaagttacaccaaatgaattattatcacttgcacttggattc 570 Query: 944 tctgtcttctccctcttaagtcgagctgcatggctctcaaaggatattgtgtggttatct 1003 ||||||||||||||| ||||||||||||||||||| |||||||||||||| ||| | ||| Sbjct: 571 tctgtcttctccctcctaagtcgagctgcatggctatcaaaggatattgtctggctgtct 630 Query: 1004 gcagactcgcaatttggggagtacaccgcagtctctgcatggttaaatcagtaccataac 1063 |||||||| |||||||| |||||| | || |||||| |||||||||||||||| ||||| Sbjct: 631 gcagactcacaatttggagagtactctgcggtctcttcatggttaaatcagtatcataat 690 Query: 1064 cctatgttt 1072 ||||||||| Sbjct: 691 cctatgttt 699 Score = 309 bits (156), Expect = 3e-80 Identities = 470/574 (81%), Gaps = 3/574 (0%) Strand = Plus / Plus Query: 1821 gtaaaacaaagggcagtgctgataatctgcaaatggagggtggatcatggaaatggcttc 1880 ||||||||||||| | ||||||| | |||||||||||||||||||| |||||||||||| Sbjct: 1487 gtaaaacaaagggtaatgctgatgacctgcaaatggagggtggatcgtggaaatggctta 1546 Query: 1881 aagctgcaagagttctgcttgttatccaaatttgggcagtgattgtttcactactaccgt 1940 || |||||||||| || ||| | |||||| |||||||||| ||||||| |||| || | Sbjct: 1547 aatctgcaagagtactacttatcatccaattttgggcagtacttgtttctttactcccat 1606 Query: 1941 actacatcagtcaaattcccgatggtacaccaatacaaagttcagtgatctgggtggtgc 2000 ||||||| || |||||||| | || || |||||||| | ||||||| |||| || | Sbjct: 1607 actacattagccaaattcctggtgctatgccaatacagtatgcagtgatttgggccgttc 1666 Query: 2001 tcgccattttgatgttgatcgtcctatatgccatgtttggttcaccatactctgctggtg 2060 || |||| || |||||| |||| ||||| |||||||| || |||| | |||||||| Sbjct: 1667 tctccatcactatattgatcatcctgtatgcaatgtttggctctccatcccgtgctggtg 1726 Query: 2061 ttgaatggaaacttctgaaggccacgatgatcacttcaatctcaatagggctggggctta 2120 | |||||||| ||||| || || |||||||||||||| ||| | ||||| ||||||||| Sbjct: 1727 tggaatggaagcttctaaaagctacgatgatcacttccatcaccataggaatggggctta 1786 Query: 2121 tgtcgataattaatttcactactgctcagcttggggcattgattgtgatcccaatgtgct 2180 ||||||| || ||||| ||||||||||||||||||| |||| ||||||||||||||| Sbjct: 1787 tgtcgatcataaattttgctactgctcagcttggggctctgatattgatcccaatgtgct 1846 Query: 2181 tgttttctcggccgctgaaagcacagcttggtatgagcttccttccacggacagtattgt 2240 |||||||||| ||||||| |||||||| | |||| ||||| || || |||||||||| Sbjct: 1847 tgttttctcgaccgctgagggcacagctcgagatgaatttcctacctcgcacagtattgt 1906 Query: 2241 gtgcttcaaatatacttctcgccatctttggtttccctccagctgcattgttgattataa 2300 || ||||| ||||||||| || |||| |||||||||||||||||||| | || || | Sbjct: 1907 tggcctcaaacatacttctcaccgtcttgggtttccctccagctgcatttcttatcatga 1966 Query: 2301 aagggctgtccaaggggtcctggacagtagac---cttggagatttctgggcgtcaatgg 2357 |||| || |||||||| || |||||||||||| |||| ||||||||| || |||| Sbjct: 1967 aaggtctatccaagggatcatggacagtagacattgttggtgatttctggctgtggatgg 2026 Query: 2358 agttcttgtgggaatggagtagcgccacgtatct 2391 ||||||||||||||||||| ||||| || ||||| Sbjct: 2027 agttcttgtgggaatggagcagcgcgacatatct 2060
>gb|AY105096.1| Zea mays PCO148275 mRNA sequence Length = 2592 Score = 628 bits (317), Expect = e-176 Identities = 584/673 (86%) Strand = Plus / Plus Query: 1124 acggatttcaaacgtgctggaacgatggccgctgctctcatatttaaagttggggaaact 1183 |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 977 acggctttcaaacgtgctggaacaatggctgctgctctcatatttaaagttggggaaacc 1036 Query: 1184 aggaagtatggtgatagagatagtgttacaatgtatgcggaggcatctaatggccaaatg 1243 || | || |||| || ||||||||||| || ||||| |||||||||||||| |||||| Sbjct: 1037 agaagatacagtgacagggatagtgttacgatttatgcagaggcatctaatggacaaatg 1096 Query: 1244 ccaaacttggaccttctgaatgtggtgcactatctagctgttcatagacaaggttttcgt 1303 ||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||| Sbjct: 1097 ccaaacttggaccttctgaatgtggtgcactatttggctgttcacagacaaggttttcgt 1156 Query: 1304 gtgaacattgagacaattagttcgttgttgagttctgcatggcttagggctattgctgaa 1363 |||||||| | || ||||||| |||||||| ||||||||||| |||| |||||||||| Sbjct: 1157 gtgaacatcgctgcatttagttctttgttgagctctgcatggctcagggttattgctgaa 1216 Query: 1364 gtgattcatactcttgggagtatattgagaaaaataaatcctgactggaagcttgatatt 1423 | | |||||| |||| ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 1217 attttgcatactattggtagtgtgttaagaaaaataaatcctgactggaagcttgatatt 1276 Query: 1424 acagcctctgattatgtggaggggactgccaaccttgctagctctatttataatcaggct 1483 ||| | ||||||||||||| |||||||| || || |||| |||||| || || |||||| Sbjct: 1277 gcagtccctgattatgtggaagggactgcaaatctagctaactctatgtacaaccaggct 1336 Query: 1484 cttggagtgcccaccggatctcatggcgcgttccgtgactatcaagttgatgccgtttct 1543 |||||||||||||| || || ||||| || |||||||| |||||||||||||| |||||| Sbjct: 1337 cttggagtgcccacagggtcccatggtgctttccgtgattatcaagttgatgcggtttct 1396 Query: 1544 ttagaattttcacctacattttatatcagaaatgagaatgccaaatcatcatttcttgta 1603 |||||||||||||| |||||| || ||| |||||||||||| ||||| | |||||| | Sbjct: 1397 ttagaattttcaccaacatttcatgtcaaaaatgagaatgctaaatctttgtttcttctg 1456 Query: 1604 aggggtggaaggttacttgaaggggtggtacgttctgtgaataacctgctcgagaagttc 1663 | ||||||||||||| ||||||| |||| |||||||||||| || ||||| ||||||||| Sbjct: 1457 aagggtggaaggttaattgaaggagtggcacgttctgtgaacaatctgcttgagaagttc 1516 Query: 1664 catcaatcctttttcctatatttcctcacagctccgagcaagtttatttcagttggtgtc 1723 ||||| ||||||||||| || ||||| |||| ||| |||||||| ||||| |||||||| Sbjct: 1517 catcagtcctttttcctgtacttccttacaggtccaagcaagttcatttcggttggtgtg 1576 Query: 1724 tatatgattccttttgcacttcttgtggcacccctcccaatagttgctgctgctcttgcc 1783 ||||||||||| |||||| | ||| ||||||| |||||||||||||||||||| ||||| Sbjct: 1577 tatatgattccgtttgcattgcttttggcacctctcccaatagttgctgctgcccttgct 1636 Query: 1784 aatggcggtagaa 1796 ||||| |||||| Sbjct: 1637 gatggcagtagaa 1649 Score = 406 bits (205), Expect = e-109 Identities = 538/649 (82%) Strand = Plus / Plus Query: 414 cgcggctcatcgttcgccttgggatattcctcgcttctcaccacgtcctcttcagcgtgc 473 |||||||||| || |||||||| ||||||| || ||||||||| | || ||||| || Sbjct: 237 cgcggctcattgtgcgccttggtgtattccttgcatctcaccacattctgttcagtgtta 296 Query: 474 tgtgctgttccgcgggcattatcgcactcctcttcctcccatcacttgcaaagaacacat 533 | ||||| | || ||||||||||| || || |||| || ||||||||||| ||||||| Sbjct: 297 tatgctgctatgcaggcattatcgcgctactactccttccttcacttgcaaaaaacacat 356 Query: 534 acctctcggagaatgctcttatacctggctctgcaaatccattattctccagcgaggatg 593 |||||||||||||||||||||||||||||||||||||||||||||| || | || |||| Sbjct: 357 acctctcggagaatgctcttatacctggctctgcaaatccattattttctactgaagatg 416 Query: 594 tcacggaagctaacaagtttatcaaaggaattgaagctgcagctggggaatcaagaggcg 653 || ||||| |||| ||||| |||| ||||||||||| ||| | || ||||| | | Sbjct: 417 ccattgaagcaaacagatttatgaaagcaattgaagctgtggctagagactcaagcagtg 476 Query: 654 gaatggaaatgccaaaattcatagtgcaacaaatgaaagatctgggtgcagaagtgtgtt 713 ||| | ||| |||| ||||||| |||||||| ||||||| |||||||||||||||| Sbjct: 477 taataggcatggcaaatttcatagcacaacaaatagaagatctaggtgcagaagtgtgtt 536 Query: 714 accacaaattcctccctcatagcaagcattttcatcctctgaagttcttcacttccatga 773 |||| || || ||||||||| ||||| ||||||| ||||||||||||||||| ||||||| Sbjct: 537 accaaaagtttctccctcatggcaagaattttcaccctctgaagttcttcacctccatga 596 Query: 774 caaacgatttggcggttcgacccaatggcacctattccaactctggaacaaatacaattg 833 |||| ||| | || ||| ||| |||||||| |||| | ||| | |||||| || | Sbjct: 597 caaatgatattgcaattcaacctaatggcactgccaccaattttgggataaatactatcg 656 Query: 834 gcattatacgagctcctaggggtgatggaaaagaagctatagtattggttactccttata 893 ||||| ||||||||||| | || |||||||||||||| ||||| ||||||||||||||| Sbjct: 657 gcattttacgagctcctcgtggcgatggaaaagaagcaatagtgctggttactccttata 716 Query: 894 atcctcagaaagttcaggcaaatgaagtattatcactcgcacttggtttctctgtcttct 953 || |||| | ||||||| | |||||| ||||||| || || ||||||||||||||||||| Sbjct: 717 attctcaaagagttcagtcgaatgaattattatcgctggctcttggtttctctgtcttct 776 Query: 954 ccctcttaagtcgagctgcatggctctcaaaggatattgtgtggttatctgcagactcgc 1013 | |||||||||||||| |||||||| || |||||| |||||||||||||||||||||| | Sbjct: 777 ctctcttaagtcgagcagcatggctgtccaaggatgttgtgtggttatctgcagactcac 836 Query: 1014 aatttggggagtacaccgcagtctctgcatggttaaatcagtaccataa 1062 | ||||| ||||| | ||||||||||||||| |||| ||||| ||||| Sbjct: 837 agtttggagagtatgctgcagtctctgcatggctaaaccagtatcataa 885 Score = 178 bits (90), Expect = 7e-41 Identities = 147/166 (88%) Strand = Plus / Plus Query: 2034 tgtttggttcaccatactctgctggtgttgaatggaaacttctgaaggccacgatgatca 2093 ||||||| ||||||||||| |||||||||||||||||||||||||||| || ||||||| Sbjct: 1899 tgtttggctcaccatactcaactggtgttgaatggaaacttctgaaggctaccatgatca 1958 Query: 2094 cttcaatctcaatagggctggggcttatgtcgataattaatttcactactgctcagcttg 2153 |||| ||||| || || ||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 1959 cttccatctccatcggattggggcttatgtcgataataaatttcgccactgctcagcttg 2018 Query: 2154 gggcattgattgtgatcccaatgtgcttgttttctcggccgctgaa 2199 | || |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 2019 gtgctctgatagtgatcccaatgtgtttgttttctcggcctctgaa 2064 Score = 107 bits (54), Expect = 2e-19 Identities = 158/193 (81%), Gaps = 6/193 (3%) Strand = Plus / Plus Query: 2270 ggtttccctccagctgcattgttgattataaaagggctgtccaaggg------gtcctgg 2323 ||||| ||||||| ||| ||| ||||||| ||||| |||||||||| ||| ||| Sbjct: 2132 ggttttcctccagttgcgttgctgattatgaaaggagtgtccaagggatcgaggtcgtgg 2191 Query: 2324 acagtagaccttggagatttctgggcgtcaatggagttcttgtgggaatggagtagcgcc 2383 ||| |||| ||||||||||||||| | ||||||||| |||||||| |||| ||||| Sbjct: 2192 acaatagatgttggagatttctgggtatggatggagttcctgtgggaaaggagcagcgcg 2251 Query: 2384 acgtatctgtatctgtttcttgtccatcttccctgctggcttttatgcatccatgtcttg 2443 |||||||| || || |||||||| |||||||||||||||||||| ||| ||| ||| || Sbjct: 2252 acgtatctttacctatttcttgtacatcttccctgctggcttttgtgcgtccttgtgttc 2311 Query: 2444 ctgcatccatgtc 2456 ||||| ||||||| Sbjct: 2312 ctgcacccatgtc 2324 Score = 83.8 bits (42), Expect = 3e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 1857 agggtggatcatggaaatggcttcaagctgcaagagttctgcttgttatccaaatttggg 1916 |||||||||||||||||||||||| |||||||| ||| |||||||| ||||| | |||| Sbjct: 1722 agggtggatcatggaaatggcttcgagctgcaaaagtattgcttgttgtccaattatggg 1781 Query: 1917 cagtgattgtttcactac 1934 |||| |||||||||||| Sbjct: 1782 cagtacttgtttcactac 1799
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 416 bits (210), Expect = e-112 Identities = 342/386 (88%) Strand = Plus / Minus Query: 1096 tgatggtattgcagaaaaggctgaatttacggatttcaaacgtgctggaacgatggccgc 1155 |||||| | |||||||||||| ||| ||| || |||||||||||||||||| ||||| || Sbjct: 28114515 tgatggcactgcagaaaaggcagaacttatggctttcaaacgtgctggaacaatggctgc 28114456 Query: 1156 tgctctcatatttaaagttggggaaactaggaagtatggtgatagagatagtgttacaat 1215 ||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||| || || Sbjct: 28114455 tgcactcatatttaaagttggagaaaccaggaaatatggtgatagagatagtgtcacgat 28114396 Query: 1216 gtatgcggaggcatctaatggccaaatgccaaacttggaccttctgaatgtggtgcacta 1275 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28114395 gtatgcagaggcatctaatggccaaatgccaaacttggaccttctgaatgtggtgcacta 28114336 Query: 1276 tctagctgttcatagacaaggttttcgtgtgaacattgagacaattagttcgttgttgag 1335 | ||||||||||||||||||||||||| ||||| | |||||| ||| ||| |||||||| Sbjct: 28114335 tttagctgttcatagacaaggttttcgcgtgaatgtcgagacatttaattccttgttgag 28114276 Query: 1336 ttctgcatggcttagggctattgctgaagtgattcatactcttgggagtatattgagaaa 1395 ||| |||||||||||| |||||||||||| |||| | |||||||||| | |||||||| Sbjct: 28114275 ctcttcatggcttagggttattgctgaagtatttcaaaatcttgggagtttgttgagaaa 28114216 Query: 1396 aataaatcctgactggaagcttgatattacagcctctgattatgtggaggggactgccaa 1455 |||||||||||||||||||||||| | || | |||||||||||||||| ||||| || Sbjct: 28114215 aataaatcctgactggaagcttgacgtgaccgttcctgattatgtggagggtactgcaaa 28114156 Query: 1456 ccttgctagctctatttataatcagg 1481 ||||||||| ||||| ||||| |||| Sbjct: 28114155 ccttgctagttctatgtataaccagg 28114130 Score = 394 bits (199), Expect = e-106 Identities = 528/637 (82%), Gaps = 3/637 (0%) Strand = Plus / Minus Query: 1821 gtaaaacaaagggcagtgctgataatctgcaaatggagggtggatcatggaaatggcttc 1880 ||||||||||||| | ||||||| | |||||||||||||||||||| |||||||||||| Sbjct: 28112325 gtaaaacaaagggtaatgctgatgacctgcaaatggagggtggatcgtggaaatggctta 28112266 Query: 1881 aagctgcaagagttctgcttgttatccaaatttgggcagtgattgtttcactactaccgt 1940 || |||||||||| || ||| | |||||| |||||||||| ||||||| |||| || | Sbjct: 28112265 aatctgcaagagtactacttatcatccaattttgggcagtacttgtttctttactcccat 28112206 Query: 1941 actacatcagtcaaattcccgatggtacaccaatacaaagttcagtgatctgggtggtgc 2000 ||||||| || |||||||| | || || |||||||| | ||||||| |||| || | Sbjct: 28112205 actacattagccaaattcctggtgctatgccaatacagtatgcagtgatttgggccgttc 28112146 Query: 2001 tcgccattttgatgttgatcgtcctatatgccatgtttggttcaccatactctgctggtg 2060 || |||| || |||||| |||| ||||| |||||||| || |||| | |||||||| Sbjct: 28112145 tctccatcactatattgatcatcctgtatgcaatgtttggctctccatcccgtgctggtg 28112086 Query: 2061 ttgaatggaaacttctgaaggccacgatgatcacttcaatctcaatagggctggggctta 2120 | |||||||| ||||| || || |||||||||||||| ||| | ||||| ||||||||| Sbjct: 28112085 tggaatggaagcttctaaaagctacgatgatcacttccatcaccataggaatggggctta 28112026 Query: 2121 tgtcgataattaatttcactactgctcagcttggggcattgattgtgatcccaatgtgct 2180 ||||||| || ||||| ||||||||||||||||||| |||| ||||||||||||||| Sbjct: 28112025 tgtcgatcataaattttgctactgctcagcttggggctctgatattgatcccaatgtgct 28111966 Query: 2181 tgttttctcggccgctgaaagcacagcttggtatgagcttccttccacggacagtattgt 2240 |||||||||| ||||||| |||||||| | |||| ||||| || || |||||||||| Sbjct: 28111965 tgttttctcgaccgctgagggcacagctcgagatgaatttcctacctcgcacagtattgt 28111906 Query: 2241 gtgcttcaaatatacttctcgccatctttggtttccctccagctgcattgttgattataa 2300 || ||||| ||||||||| || |||| |||||||||||||||||||| | || || | Sbjct: 28111905 tggcctcaaacatacttctcaccgtcttgggtttccctccagctgcatttcttatcatga 28111846 Query: 2301 aagggctgtccaaggggtcctggacagtagac---cttggagatttctgggcgtcaatgg 2357 |||| || |||||||| || |||||||||||| |||| ||||||||| || |||| Sbjct: 28111845 aaggtctatccaagggatcatggacagtagacattgttggtgatttctggctgtggatgg 28111786 Query: 2358 agttcttgtgggaatggagtagcgccacgtatctgtatctgtttcttgtccatcttccct 2417 ||||||||||||||||||| ||||| || ||||||||| | ||||||||||||||||||| Sbjct: 28111785 agttcttgtgggaatggagcagcgcgacatatctgtatgtatttcttgtccatcttccct 28111726 Query: 2418 gctggcttttatgcatccatgtcttgctgcatccatg 2454 ||||||| || ||||||||||| |||||||||||||| Sbjct: 28111725 gctggctcttgtgcatccatgtgttgctgcatccatg 28111689 Score = 309 bits (156), Expect = 3e-80 Identities = 345/408 (84%) Strand = Plus / Minus Query: 665 ccaaaattcatagtgcaacaaatgaaagatctgggtgcagaagtgtgttaccacaaattc 724 ||||||||||||| ||||||| ||| ||||||| |||||||||| |||||| | ||| Sbjct: 28114985 ccaaaattcatagcacaacaaacaaaaaatctgggagcagaagtgtattaccatgagttc 28114926 Query: 725 ctccctcatagcaagcattttcatcctctgaagttcttcacttccatgacaaacgatttg 784 |||||| | ||||| ||||||||||||||||||||| || ||||||||||| || || Sbjct: 28114925 ctccctgacagcaaatgttttcatcctctgaagttctttacatccatgacaaataatatg 28114866 Query: 785 gcggttcgacccaatggcacctattccaactctggaacaaatacaattggcattatacga 844 || | ||||||||| ||||| |||||| ||| | || ||| ||||||||||||| Sbjct: 28114865 gcagccaaacccaatggaacctacaccaactttggcattaacacagttggcattatacgg 28114806 Query: 845 gctcctaggggtgatggaaaagaagctatagtattggttactccttataatcctcagaaa 904 ||||| | |||||||| |||||||| || ||| ||||||||||||||||| |||||||| Sbjct: 28114805 gctccacgaggtgatggcaaagaagcaattgtactggttactccttataattctcagaaa 28114746 Query: 905 gttcaggcaaatgaagtattatcactcgcacttggtttctctgtcttctccctcttaagt 964 ||| |||||||| |||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 28114745 gttacaccaaatgaattattatcacttgcacttggattctctgtcttctccctcctaagt 28114686 Query: 965 cgagctgcatggctctcaaaggatattgtgtggttatctgcagactcgcaatttggggag 1024 |||||||||||||| |||||||||||||| ||| | ||||||||||| |||||||| ||| Sbjct: 28114685 cgagctgcatggctatcaaaggatattgtctggctgtctgcagactcacaatttggagag 28114626 Query: 1025 tacaccgcagtctctgcatggttaaatcagtaccataaccctatgttt 1072 ||| | || |||||| |||||||||||||||| ||||| ||||||||| Sbjct: 28114625 tactctgcggtctcttcatggttaaatcagtatcataatcctatgttt 28114578 Score = 202 bits (102), Expect = 5e-48 Identities = 147/162 (90%) Strand = Plus / Minus Query: 1621 tgaaggggtggtacgttctgtgaataacctgctcgagaagttccatcaatcctttttcct 1680 |||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 28112525 tgaaggggtggtgcgctctgtaaataacctgctcgagaagttccatcaatcgtttttcct 28112466 Query: 1681 atatttcctcacagctccgagcaagtttatttcagttggtgtctatatgattccttttgc 1740 |||||||| ||||| || |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 28112465 gtatttccttacagccccaagcaagttcatttcagttggtgtatatatgattccgtttgc 28112406 Query: 1741 acttcttgtggcacccctcccaatagttgctgctgctcttgc 1782 | | || |||||||||||||||||||||||||||||||||| Sbjct: 28112405 attactcctggcacccctcccaatagttgctgctgctcttgc 28112364 Score = 141 bits (71), Expect = 2e-29 Identities = 122/139 (87%) Strand = Plus / Minus Query: 1478 caggctcttggagtgcccaccggatctcatggcgcgttccgtgactatcaagttgatgcc 1537 |||||||||||||||||||| || |||||||| || ||||||||||||||||||||||| Sbjct: 28114032 caggctcttggagtgcccacaggttctcatggtgctttccgtgactatcaagttgatgca 28113973 Query: 1538 gtttctttagaattttcacctacattttatatcagaaatgagaatgccaaatcatcattt 1597 ||||||||||||||| |||| ||||| || | | ||| |||||||| ||||| |||||| Sbjct: 28113972 gtttctttagaatttgcaccagcatttcatcttaaaaacgagaatgctaaatcttcattt 28113913 Query: 1598 cttgtaaggggtggaaggt 1616 ||| | ||||||||||||| Sbjct: 28113912 cttctcaggggtggaaggt 28113894 Score = 75.8 bits (38), Expect = 7e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 485 gcgggcattatcgcactcctcttcctcccatcacttgcaaagaacacatacctctcggag 544 |||||||| ||||| |||||||||||||| || ||||| |||||||| ||||| || ||| Sbjct: 28115923 gcgggcataatcgcgctcctcttcctcccttcgcttgccaagaacacgtacctatcagag 28115864 Query: 545 aatgctcttatacc 558 || ||||||||||| Sbjct: 28115863 aacgctcttatacc 28115850 Score = 52.0 bits (26), Expect = 0.011 Identities = 53/62 (85%) Strand = Plus / Minus Query: 407 ccgaagccgcggctcatcgttcgccttgggatattcctcgcttctcaccacgtcctcttc 466 ||||||||||| ||||| || ||||| ||| |||||||||| || |||||| | |||||| Sbjct: 28116092 ccgaagccgcgcctcattgtccgcctcggggtattcctcgcgtcgcaccacatactcttc 28116033 Query: 467 ag 468 || Sbjct: 28116032 ag 28116031 Score = 50.1 bits (25), Expect = 0.043 Identities = 34/37 (91%) Strand = Plus / Minus Query: 620 ggaattgaagctgcagctggggaatcaagaggcggaa 656 ||||||||||||||| ||||||||||||||| |||| Sbjct: 28115676 ggaattgaagctgcaattggggaatcaagaggtggaa 28115640
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 416 bits (210), Expect = e-112 Identities = 342/386 (88%) Strand = Plus / Minus Query: 1096 tgatggtattgcagaaaaggctgaatttacggatttcaaacgtgctggaacgatggccgc 1155 |||||| | |||||||||||| ||| ||| || |||||||||||||||||| ||||| || Sbjct: 129714 tgatggcactgcagaaaaggcagaacttatggctttcaaacgtgctggaacaatggctgc 129655 Query: 1156 tgctctcatatttaaagttggggaaactaggaagtatggtgatagagatagtgttacaat 1215 ||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||| || || Sbjct: 129654 tgcactcatatttaaagttggagaaaccaggaaatatggtgatagagatagtgtcacgat 129595 Query: 1216 gtatgcggaggcatctaatggccaaatgccaaacttggaccttctgaatgtggtgcacta 1275 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129594 gtatgcagaggcatctaatggccaaatgccaaacttggaccttctgaatgtggtgcacta 129535 Query: 1276 tctagctgttcatagacaaggttttcgtgtgaacattgagacaattagttcgttgttgag 1335 | ||||||||||||||||||||||||| ||||| | |||||| ||| ||| |||||||| Sbjct: 129534 tttagctgttcatagacaaggttttcgcgtgaatgtcgagacatttaattccttgttgag 129475 Query: 1336 ttctgcatggcttagggctattgctgaagtgattcatactcttgggagtatattgagaaa 1395 ||| |||||||||||| |||||||||||| |||| | |||||||||| | |||||||| Sbjct: 129474 ctcttcatggcttagggttattgctgaagtatttcaaaatcttgggagtttgttgagaaa 129415 Query: 1396 aataaatcctgactggaagcttgatattacagcctctgattatgtggaggggactgccaa 1455 |||||||||||||||||||||||| | || | |||||||||||||||| ||||| || Sbjct: 129414 aataaatcctgactggaagcttgacgtgaccgttcctgattatgtggagggtactgcaaa 129355 Query: 1456 ccttgctagctctatttataatcagg 1481 ||||||||| ||||| ||||| |||| Sbjct: 129354 ccttgctagttctatgtataaccagg 129329 Score = 394 bits (199), Expect = e-106 Identities = 528/637 (82%), Gaps = 3/637 (0%) Strand = Plus / Minus Query: 1821 gtaaaacaaagggcagtgctgataatctgcaaatggagggtggatcatggaaatggcttc 1880 ||||||||||||| | ||||||| | |||||||||||||||||||| |||||||||||| Sbjct: 127524 gtaaaacaaagggtaatgctgatgacctgcaaatggagggtggatcgtggaaatggctta 127465 Query: 1881 aagctgcaagagttctgcttgttatccaaatttgggcagtgattgtttcactactaccgt 1940 || |||||||||| || ||| | |||||| |||||||||| ||||||| |||| || | Sbjct: 127464 aatctgcaagagtactacttatcatccaattttgggcagtacttgtttctttactcccat 127405 Query: 1941 actacatcagtcaaattcccgatggtacaccaatacaaagttcagtgatctgggtggtgc 2000 ||||||| || |||||||| | || || |||||||| | ||||||| |||| || | Sbjct: 127404 actacattagccaaattcctggtgctatgccaatacagtatgcagtgatttgggccgttc 127345 Query: 2001 tcgccattttgatgttgatcgtcctatatgccatgtttggttcaccatactctgctggtg 2060 || |||| || |||||| |||| ||||| |||||||| || |||| | |||||||| Sbjct: 127344 tctccatcactatattgatcatcctgtatgcaatgtttggctctccatcccgtgctggtg 127285 Query: 2061 ttgaatggaaacttctgaaggccacgatgatcacttcaatctcaatagggctggggctta 2120 | |||||||| ||||| || || |||||||||||||| ||| | ||||| ||||||||| Sbjct: 127284 tggaatggaagcttctaaaagctacgatgatcacttccatcaccataggaatggggctta 127225 Query: 2121 tgtcgataattaatttcactactgctcagcttggggcattgattgtgatcccaatgtgct 2180 ||||||| || ||||| ||||||||||||||||||| |||| ||||||||||||||| Sbjct: 127224 tgtcgatcataaattttgctactgctcagcttggggctctgatattgatcccaatgtgct 127165 Query: 2181 tgttttctcggccgctgaaagcacagcttggtatgagcttccttccacggacagtattgt 2240 |||||||||| ||||||| |||||||| | |||| ||||| || || |||||||||| Sbjct: 127164 tgttttctcgaccgctgagggcacagctcgagatgaatttcctacctcgcacagtattgt 127105 Query: 2241 gtgcttcaaatatacttctcgccatctttggtttccctccagctgcattgttgattataa 2300 || ||||| ||||||||| || |||| |||||||||||||||||||| | || || | Sbjct: 127104 tggcctcaaacatacttctcaccgtcttgggtttccctccagctgcatttcttatcatga 127045 Query: 2301 aagggctgtccaaggggtcctggacagtagac---cttggagatttctgggcgtcaatgg 2357 |||| || |||||||| || |||||||||||| |||| ||||||||| || |||| Sbjct: 127044 aaggtctatccaagggatcatggacagtagacattgttggtgatttctggctgtggatgg 126985 Query: 2358 agttcttgtgggaatggagtagcgccacgtatctgtatctgtttcttgtccatcttccct 2417 ||||||||||||||||||| ||||| || ||||||||| | ||||||||||||||||||| Sbjct: 126984 agttcttgtgggaatggagcagcgcgacatatctgtatgtatttcttgtccatcttccct 126925 Query: 2418 gctggcttttatgcatccatgtcttgctgcatccatg 2454 ||||||| || ||||||||||| |||||||||||||| Sbjct: 126924 gctggctcttgtgcatccatgtgttgctgcatccatg 126888 Score = 309 bits (156), Expect = 3e-80 Identities = 345/408 (84%) Strand = Plus / Minus Query: 665 ccaaaattcatagtgcaacaaatgaaagatctgggtgcagaagtgtgttaccacaaattc 724 ||||||||||||| ||||||| ||| ||||||| |||||||||| |||||| | ||| Sbjct: 130184 ccaaaattcatagcacaacaaacaaaaaatctgggagcagaagtgtattaccatgagttc 130125 Query: 725 ctccctcatagcaagcattttcatcctctgaagttcttcacttccatgacaaacgatttg 784 |||||| | ||||| ||||||||||||||||||||| || ||||||||||| || || Sbjct: 130124 ctccctgacagcaaatgttttcatcctctgaagttctttacatccatgacaaataatatg 130065 Query: 785 gcggttcgacccaatggcacctattccaactctggaacaaatacaattggcattatacga 844 || | ||||||||| ||||| |||||| ||| | || ||| ||||||||||||| Sbjct: 130064 gcagccaaacccaatggaacctacaccaactttggcattaacacagttggcattatacgg 130005 Query: 845 gctcctaggggtgatggaaaagaagctatagtattggttactccttataatcctcagaaa 904 ||||| | |||||||| |||||||| || ||| ||||||||||||||||| |||||||| Sbjct: 130004 gctccacgaggtgatggcaaagaagcaattgtactggttactccttataattctcagaaa 129945 Query: 905 gttcaggcaaatgaagtattatcactcgcacttggtttctctgtcttctccctcttaagt 964 ||| |||||||| |||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 129944 gttacaccaaatgaattattatcacttgcacttggattctctgtcttctccctcctaagt 129885 Query: 965 cgagctgcatggctctcaaaggatattgtgtggttatctgcagactcgcaatttggggag 1024 |||||||||||||| |||||||||||||| ||| | ||||||||||| |||||||| ||| Sbjct: 129884 cgagctgcatggctatcaaaggatattgtctggctgtctgcagactcacaatttggagag 129825 Query: 1025 tacaccgcagtctctgcatggttaaatcagtaccataaccctatgttt 1072 ||| | || |||||| |||||||||||||||| ||||| ||||||||| Sbjct: 129824 tactctgcggtctcttcatggttaaatcagtatcataatcctatgttt 129777 Score = 202 bits (102), Expect = 5e-48 Identities = 147/162 (90%) Strand = Plus / Minus Query: 1621 tgaaggggtggtacgttctgtgaataacctgctcgagaagttccatcaatcctttttcct 1680 |||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 127724 tgaaggggtggtgcgctctgtaaataacctgctcgagaagttccatcaatcgtttttcct 127665 Query: 1681 atatttcctcacagctccgagcaagtttatttcagttggtgtctatatgattccttttgc 1740 |||||||| ||||| || |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 127664 gtatttccttacagccccaagcaagttcatttcagttggtgtatatatgattccgtttgc 127605 Query: 1741 acttcttgtggcacccctcccaatagttgctgctgctcttgc 1782 | | || |||||||||||||||||||||||||||||||||| Sbjct: 127604 attactcctggcacccctcccaatagttgctgctgctcttgc 127563 Score = 141 bits (71), Expect = 2e-29 Identities = 122/139 (87%) Strand = Plus / Minus Query: 1478 caggctcttggagtgcccaccggatctcatggcgcgttccgtgactatcaagttgatgcc 1537 |||||||||||||||||||| || |||||||| || ||||||||||||||||||||||| Sbjct: 129231 caggctcttggagtgcccacaggttctcatggtgctttccgtgactatcaagttgatgca 129172 Query: 1538 gtttctttagaattttcacctacattttatatcagaaatgagaatgccaaatcatcattt 1597 ||||||||||||||| |||| ||||| || | | ||| |||||||| ||||| |||||| Sbjct: 129171 gtttctttagaatttgcaccagcatttcatcttaaaaacgagaatgctaaatcttcattt 129112 Query: 1598 cttgtaaggggtggaaggt 1616 ||| | ||||||||||||| Sbjct: 129111 cttctcaggggtggaaggt 129093 Score = 75.8 bits (38), Expect = 7e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 485 gcgggcattatcgcactcctcttcctcccatcacttgcaaagaacacatacctctcggag 544 |||||||| ||||| |||||||||||||| || ||||| |||||||| ||||| || ||| Sbjct: 131122 gcgggcataatcgcgctcctcttcctcccttcgcttgccaagaacacgtacctatcagag 131063 Query: 545 aatgctcttatacc 558 || ||||||||||| Sbjct: 131062 aacgctcttatacc 131049 Score = 52.0 bits (26), Expect = 0.011 Identities = 53/62 (85%) Strand = Plus / Minus Query: 407 ccgaagccgcggctcatcgttcgccttgggatattcctcgcttctcaccacgtcctcttc 466 ||||||||||| ||||| || ||||| ||| |||||||||| || |||||| | |||||| Sbjct: 131291 ccgaagccgcgcctcattgtccgcctcggggtattcctcgcgtcgcaccacatactcttc 131232 Query: 467 ag 468 || Sbjct: 131231 ag 131230 Score = 50.1 bits (25), Expect = 0.043 Identities = 34/37 (91%) Strand = Plus / Minus Query: 620 ggaattgaagctgcagctggggaatcaagaggcggaa 656 ||||||||||||||| ||||||||||||||| |||| Sbjct: 130875 ggaattgaagctgcaattggggaatcaagaggtggaa 130839
>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445E10 Length = 145912 Score = 52.0 bits (26), Expect = 0.011 Identities = 53/62 (85%) Strand = Plus / Minus Query: 407 ccgaagccgcggctcatcgttcgccttgggatattcctcgcttctcaccacgtcctcttc 466 ||||||||||| ||||| || ||||| ||| |||||||||| || |||||| | |||||| Sbjct: 86 ccgaagccgcgcctcattgtccgcctcggggtattcctcgcgtcgcaccacatactcttc 27 Query: 467 ag 468 || Sbjct: 26 ag 25
>ref|NM_203081.1| Arabidopsis thaliana GPI-anchor transamidase (AT5G19130) mRNA, complete cds Length = 3095 Score = 50.1 bits (25), Expect = 0.043 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1640 gtgaataacctgctcgagaagttccatcaatcctttttcct 1680 ||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 1301 gtgaacaacctccttgagaagttccatcaatcgtttttcct 1341 Score = 48.1 bits (24), Expect = 0.17 Identities = 42/48 (87%) Strand = Plus / Plus Query: 521 gcaaagaacacatacctctcggagaatgctcttatacctggctctgca 568 ||||||||||| ||| |||| ||||||||||| || || ||||||||| Sbjct: 203 gcaaagaacacttacatctccgagaatgctctaatgccaggctctgca 250
>ref|NM_121918.2| Arabidopsis thaliana GPI-anchor transamidase (AT5G19130) mRNA, complete cds Length = 3118 Score = 50.1 bits (25), Expect = 0.043 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1640 gtgaataacctgctcgagaagttccatcaatcctttttcct 1680 ||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 1324 gtgaacaacctccttgagaagttccatcaatcgtttttcct 1364 Score = 48.1 bits (24), Expect = 0.17 Identities = 42/48 (87%) Strand = Plus / Plus Query: 521 gcaaagaacacatacctctcggagaatgctcttatacctggctctgca 568 ||||||||||| ||| |||| ||||||||||| || || ||||||||| Sbjct: 217 gcaaagaacacttacatctccgagaatgctctaatgccaggctctgca 264
>gb|BT002413.1| Arabidopsis thaliana GPAA1 - like protein (At5g19130) mRNA, complete cds Length = 2334 Score = 50.1 bits (25), Expect = 0.043 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1640 gtgaataacctgctcgagaagttccatcaatcctttttcct 1680 ||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 1324 gtgaacaacctccttgagaagttccatcaatcgtttttcct 1364 Score = 48.1 bits (24), Expect = 0.17 Identities = 42/48 (87%) Strand = Plus / Plus Query: 521 gcaaagaacacatacctctcggagaatgctcttatacctggctctgca 568 ||||||||||| ||| |||| ||||||||||| || || ||||||||| Sbjct: 217 gcaaagaacacttacatctccgagaatgctctaatgccaggctctgca 264
>gb|AC069326.1|AC069326 Genomic Sequence For Arabidopsis thaliana Clone T24G5 From Chromosome V, complete sequence Length = 86358 Score = 50.1 bits (25), Expect = 0.043 Identities = 37/41 (90%) Strand = Plus / Minus Query: 1640 gtgaataacctgctcgagaagttccatcaatcctttttcct 1680 ||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 8543 gtgaacaacctccttgagaagttccatcaatcgtttttcct 8503
>emb|BX831717.1|CNS0A1Q5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH25ZF02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2328 Score = 50.1 bits (25), Expect = 0.043 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1640 gtgaataacctgctcgagaagttccatcaatcctttttcct 1680 ||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 1301 gtgaacaacctccttgagaagttccatcaatcgtttttcct 1341 Score = 48.1 bits (24), Expect = 0.17 Identities = 42/48 (87%) Strand = Plus / Plus Query: 521 gcaaagaacacatacctctcggagaatgctcttatacctggctctgca 568 ||||||||||| ||| |||| ||||||||||| || || ||||||||| Sbjct: 203 gcaaagaacacttacatctccgagaatgctctaatgccaggctctgca 250
>gb|AC152349.11| Medicago truncatula clone mth2-52p10, complete sequence Length = 105433 Score = 48.1 bits (24), Expect = 0.17 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1493 cccaccggatctcatggcgcgttccgtgactatcaagttgatgc 1536 ||||| || |||||||| || |||||||| |||||||||||||| Sbjct: 12096 cccactggttctcatggtgccttccgtgattatcaagttgatgc 12053
>gb|AC007222.5| Homo sapiens chromosome 16 clone RP11-441K8, complete sequence Length = 187191 Score = 46.1 bits (23), Expect = 0.67 Identities = 23/23 (100%) Strand = Plus / Plus Query: 228 ccaccactcaccgccccaaaccc 250 ||||||||||||||||||||||| Sbjct: 36975 ccaccactcaccgccccaaaccc 36997
>gb|AC079410.3| Homo sapiens chromosome 16 clone CTC-775M10, complete sequence Length = 116293 Score = 46.1 bits (23), Expect = 0.67 Identities = 23/23 (100%) Strand = Plus / Minus Query: 228 ccaccactcaccgccccaaaccc 250 ||||||||||||||||||||||| Sbjct: 3407 ccaccactcaccgccccaaaccc 3385
>gb|EF059496.1| Synthetic construct Saccharomyces cerevisiae clone FLH201585.01X GAA1, complete sequence Length = 1845 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 845 gctcctaggggtgatggaaaagaagc 870 ||||||||||||||||||| |||||| Sbjct: 376 gctcctaggggtgatggaacagaagc 401
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 gcgctcgctgttcggctttgcc 74 |||||||||||||||||||||| Sbjct: 511243 gcgctcgctgttcggctttgcc 511264
>gb|AC157561.10| Mus musculus chromosome 7, clone RP23-356A20, complete sequence Length = 232927 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2572 ttttttattttaagaattgcttattt 2597 |||||| ||||||||||||||||||| Sbjct: 231744 tttttttttttaagaattgcttattt 231769
>emb|AL359739.8| Human DNA sequence from clone RP11-243M12 on chromosome 1 Contains a ribosomal protein S20 (RPS20) pseudogene, complete sequence Length = 170284 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2194 gctgaaagcacagcttggtatg 2215 |||||||||||||||||||||| Sbjct: 163364 gctgaaagcacagcttggtatg 163385
>dbj|AK173650.1| Ciona intestinalis cDNA, clone:cieg056j13, full insert sequence Length = 1030 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 895 tcctcagaaagttcaggcaaat 916 |||||||||||||||||||||| Sbjct: 754 tcctcagaaagttcaggcaaat 733
>dbj|AK115444.1| Ciona intestinalis cDNA, clone:cieg053d12, full insert sequence Length = 1751 Score = 44.1 bits (22), Expect = 2.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 895 tcctcagaaagttcaggcaaat 916 |||||||||||||||||||||| Sbjct: 1434 tcctcagaaagttcaggcaaat 1455
>emb|X79409.1| S.cerevisiae GAA1 gene Length = 3344 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 845 gctcctaggggtgatggaaaagaagc 870 ||||||||||||||||||| |||||| Sbjct: 1168 gctcctaggggtgatggaacagaagc 1193
>emb|Z73260.1|SCYLR088W S.cerevisiae chromosome XII reading frame ORF YLR088w Length = 2505 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 845 gctcctaggggtgatggaaaagaagc 870 ||||||||||||||||||| |||||| Sbjct: 751 gctcctaggggtgatggaacagaagc 776
>gb|U53880.1|YSCL9449 Saccharomyces cerevisiae chromosome XII cosmid 9449 Length = 42022 Score = 44.1 bits (22), Expect = 2.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 845 gctcctaggggtgatggaaaagaagc 870 ||||||||||||||||||| |||||| Sbjct: 32207 gctcctaggggtgatggaacagaagc 32232 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 504,796,587 Number of extensions: 27891098 Number of successful extensions: 141559 Number of sequences better than 10.0: 22 Number of HSP's gapped: 141549 Number of HSP's successfully gapped: 57 Length of query: 2721 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2698 Effective length of database: 18,503,978,556 Effective search space: 49923734144088 Effective search space used: 49923734144088 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
