ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf102b17 |
|---|---|
| Clone Library Name | barley_pub |
>Q7NY13:IF2_CHRVO Translation initiation factor IF-2 - Chromobacterium violaceum| Length = 964 Score = 34.3 bits (77), Expect = 0.27 Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 7/84 (8%) Frame = +3 Query: 48 PVAGARHYRPQGSGVRGLRRGVWRCDPE--GTGDVGQREDEGSARPV-----AWGWGREG 206 P R RP G+G RG R G P G GD G R +A P A G R G Sbjct: 265 PGGDNRGPRPAGAGDRGPRPGGDNRGPRPAGAGDRGPRPAPAAAAPSQPPAPAPGGSRPG 324 Query: 207 SGRPGLDGSTTATRLTGNGLSSVG 278 G+ G + S + G GL + G Sbjct: 325 KGKKGGERSWDDNKKGGRGLKTKG 348
>Q4R739:ANR53_MACFA Ankyrin repeat domain-containing protein 53 - Macaca fascicularis| (Crab eating macaque) (Cynomolgus monkey) Length = 496 Score = 32.3 bits (72), Expect = 1.0 Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 17/112 (15%) Frame = -2 Query: 414 WNHTYTC*YVMLCIWQNGKKFFSPCFESRVESMSSAMTSGPRTPLLQPKTSHCRLTESP- 238 WNH ++ +W+ KK F+ C +++++ S + L++ + H L E+ Sbjct: 220 WNHRACARFLKDAMWKKDKKDFA-CEMRKMKTLKSQLALMEYNYLIEYQKEHKILREAAI 278 Query: 237 -----SSTHPG--------RAGHFLLCPSPRPRGGH---FLHPPVDRRHQCL 130 HPG +A L +P RG HP V+ R QC+ Sbjct: 279 RKWLHGKLHPGHSLVSNTKQARATALSKTPEQRGSQCSSSFHPSVEARLQCI 330
>P18318:UREF_KLEAE Urease accessory protein ureF - Klebsiella aerogenes| Length = 224 Score = 32.0 bits (71), Expect = 1.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 166 EVPAPWPGAGAEKEVAGPAWMGRRRRLG*PAMA 264 + P PW + ++AG AW+G R R+ P MA Sbjct: 116 DCPPPWRSLCQQSQLAGMAWLGVRWRIALPEMA 148
>Q9XZV1:SWP1_ENCCU Spore wall protein 1 precursor - Encephalitozoon cuniculi| Length = 450 Score = 31.6 bits (70), Expect = 1.7 Identities = 25/81 (30%), Positives = 34/81 (41%) Frame = +3 Query: 21 GSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGWGR 200 GS GSG G+ GSG G G +G+G G GS+ G G Sbjct: 355 GSSGSGSGGSSGGSSGSGSDGSGSGGSSGGSSGSGSDGSGSGG--SSGGSS-----GSGS 407 Query: 201 EGSGRPGLDGSTTATRLTGNG 263 +GSG G G ++ + G+G Sbjct: 408 DGSGSGGSSGGSSGSGSDGSG 428 Score = 29.3 bits (64), Expect = 8.5 Identities = 27/86 (31%), Positives = 36/86 (41%) Frame = +3 Query: 21 GSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGWGR 200 GS GSG G+ GSG G G +G+G G GS+ G G Sbjct: 372 GSDGSGSGGSSGGSSGSGSDGSGSGGSSGGSSGSGSDGSGSGG--SSGGSS-----GSGS 424 Query: 201 EGSGRPGLDGSTTATRLTGNGLSSVG 278 +GSG G G ++ +G+G S G Sbjct: 425 DGSGSGGSSGGSSG---SGSGGESGG 447
>P11274:BCR_HUMAN Breakpoint cluster region protein - Homo sapiens (Human)| Length = 1271 Score = 31.6 bits (70), Expect = 1.7 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 5/71 (7%) Frame = +3 Query: 30 ADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVA-----WGW 194 ADG+ P A RP G G G R P G G+R+D G VA + Sbjct: 102 ADGADPPPAEEPEARPDGEGSPGKARPGTARRP-GAAASGERDDRGPPASVAALRSNFER 160 Query: 195 GREGSGRPGLD 227 R+G G+PG D Sbjct: 161 IRKGHGQPGAD 171
>Q68G95:PRIO_MOSCH Major prion protein precursor - Moschus chrysogaster (Alpine musk| deer) Length = 256 Score = 31.2 bits (69), Expect = 2.2 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGAGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>P41909:PXA1_YEAST Peroxisomal long-chain fatty acid import protein 2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 870 Score = 30.8 bits (68), Expect = 2.9 Identities = 16/68 (23%), Positives = 34/68 (50%) Frame = +3 Query: 222 LDGSTTATRLTGNGLSSVGEVECVVLKSLLKTWIQPDFRSMERRISFHFAIYIT*HINMY 401 LDG + G G S + ++ C L ++ ++ + ++R++S +F + +T +I+ Sbjct: 230 LDGQIVKNIIAGRGRSFLWDLGCWFLIAVPASYTNSAIKLLQRKLSLNFRVNLTRYIHDM 289 Query: 402 TCDSTETF 425 D TF Sbjct: 290 YLDKRLTF 297
>Q95270:PRIO_THEGE Major prion protein precursor - Theropithecus gelada (Gelada| baboon) Length = 238 Score = 30.8 bits (68), Expect = 2.9 Identities = 23/65 (35%), Positives = 28/65 (43%) Frame = +3 Query: 42 GYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGWGREGSGRPG 221 G+ G+R Y QGS G R P+G G GQ G +P GWG+ G G Sbjct: 23 GWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWG 75 Query: 222 LDGST 236 G T Sbjct: 76 QGGGT 80
>P67991:PRIO_MACSY Major prion protein precursor - Macaca sylvanus (Barbary ape)| Length = 238 Score = 30.8 bits (68), Expect = 2.9 Identities = 23/65 (35%), Positives = 28/65 (43%) Frame = +3 Query: 42 GYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGWGREGSGRPG 221 G+ G+R Y QGS G R P+G G GQ G +P GWG+ G G Sbjct: 23 GWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWG 75 Query: 222 LDGST 236 G T Sbjct: 76 QGGGT 80
>P67989:PRIO_CERDI Major prion protein precursor - Cercopithecus diana (Diana monkey)| Length = 245 Score = 30.8 bits (68), Expect = 2.9 Identities = 23/65 (35%), Positives = 28/65 (43%) Frame = +3 Query: 42 GYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGWGREGSGRPG 221 G+ G+R Y QGS G R P+G G GQ G +P GWG+ G G Sbjct: 30 GWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWG 82 Query: 222 LDGST 236 G T Sbjct: 83 QGGGT 87
>P67990:PRIO_CERAT Major prion protein precursor - Cercocebus aterrimus (Black crested| mangabey) (Lophocebus aterrimus) Length = 238 Score = 30.8 bits (68), Expect = 2.9 Identities = 23/65 (35%), Positives = 28/65 (43%) Frame = +3 Query: 42 GYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGWGREGSGRPG 221 G+ G+R Y QGS G R P+G G GQ G +P GWG+ G G Sbjct: 23 GWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWG 75 Query: 222 LDGST 236 G T Sbjct: 76 QGGGT 80
>P67988:PRIO_CERAE Major prion protein precursor - Cercopithecus aethiops (Green| monkey) (Grivet) Length = 245 Score = 30.8 bits (68), Expect = 2.9 Identities = 23/65 (35%), Positives = 28/65 (43%) Frame = +3 Query: 42 GYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGWGREGSGRPG 221 G+ G+R Y QGS G R P+G G GQ G +P GWG+ G G Sbjct: 30 GWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWG 82 Query: 222 LDGST 236 G T Sbjct: 83 QGGGT 87
>Q15746:MYLK_HUMAN Myosin light chain kinase, smooth muscle - Homo sapiens (Human)| Length = 1914 Score = 30.8 bits (68), Expect = 3.0 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = -2 Query: 345 PCFESRVESMSSAMTSGPRTPLLQPKTSHCRLTESPSSTHPGRAGHFLLCPSPRPR 178 P ES++ES + + P+TP+LQ +S L + P G +L PS R Sbjct: 316 PPRESKLESCKDSPRTAPQTPVLQKTSSSITLQAARVQPEPRAPGLGVLSPSGEER 371
>P23907:PRIO_SHEEP Major prion protein precursor - Ovis aries (Sheep)| Length = 256 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>Q5XVM4:PRIO_RUPRU Major prion protein precursor - Rupicapra rupicapra (Chamois)| Length = 256 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>P49927:PRIO_PIG Major prion protein precursor - Sus scrofa (Pig)| Length = 257 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>Q7JK02:PRIO_OVIMU Major prion protein precursor - Ovis orientalis musimon (Mouflon)| Length = 256 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>Q7JIY2:PRIO_OVIMO Major prion protein precursor - Ovibos moschatus (Muskox)| Length = 256 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>Q7JIH3:PRIO_OVICA Major prion protein precursor - Ovis canadensis (Bighorn sheep)| Length = 256 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>P47852:PRIO_ODOHE Major prion protein precursor - Odocoileus hemionus (Mule deer)| (Black-tailed deer) Length = 256 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>P40244:PRIO_MUSVI Major prion protein precursor - Mustela vison (American mink)| Length = 257 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>P52114:PRIO_MUSPF Major prion protein precursor - Mustela putorius furo (European| domestic ferret) (Mustela furo) Length = 257 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>O18754:PRIO_FELCA Major prion protein precursor - Felis silvestris catus (Cat)| Length = 256 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>P67986:PRIO_CEREN Major prion protein precursor - Cervus elaphus nelsoni (North| American elk) (Cervus canadensis nelsoni) Length = 256 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>P67987:PRIO_CEREL Major prion protein precursor - Cervus elaphus (Red deer)| Length = 256 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>P52113:PRIO_CAPHI Major prion protein precursor - Capra hircus (Goat)| Length = 256 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>O46501:PRIO_CANFA Major prion protein precursor - Canis familiaris (Dog)| Length = 255 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>P79141:PRIO_CAMDR Major prion protein precursor - Camelus dromedarius (Dromedary)| (Arabian camel) Length = 255 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>Q95M08:PRIO_BUDTA Major prion protein precursor - Budorcas taxicolor (Golden takin)| Length = 256 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>P10279:PRIO_BOVIN Major prion protein precursor - Bos taurus (Bovine)| Length = 264 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>Q5UJI7:PRIO_BOSIN Major prion protein precursor - Bos indicus (Zebu)| Length = 264 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>Q5UJH0:PRIO_BOSGA Major prion protein precursor - Bos gaurus (Seladang) (Indian| bison) Length = 264 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>Q5UAF1:PRIO_BISBI Major prion protein precursor - Bison bison (American bison)| Length = 264 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>Q5UJG1:PRIO_ANTCE Major prion protein precursor - Antilope cervicapra (Blackbuck)| Length = 264 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R Y QGS G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSR-YPGQGSP------GGNRYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>Q6EH52:PRIO_AILME Major prion protein precursor - Ailuropoda melanoleuca (Giant| panda) Length = 264 Score = 30.4 bits (67), Expect = 3.8 Identities = 19/66 (28%), Positives = 25/66 (37%) Frame = +3 Query: 15 CVGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGW 194 C G G+ G+R+ P G R P+G G GQ G +P GW Sbjct: 24 CKKRPKPGGGWNTGGSRYPGPGSPGGN-------RYPPQGGGGWGQPHGGGWGQPHGGGW 76 Query: 195 GREGSG 212 G+ G Sbjct: 77 GQPHGG 82
>P49256:LMAN2_CANFA Vesicular integral-membrane protein VIP36 precursor - Canis| familiaris (Dog) Length = 356 Score = 30.4 bits (67), Expect = 3.8 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = +3 Query: 186 WGWGREGSGRPGLDG 230 WGWGR GRPGL G Sbjct: 10 WGWGRRCLGRPGLPG 24
>Q8VDR9:DOCK6_MOUSE Dedicator of cytokinesis protein 6 - Mus musculus (Mouse)| Length = 2080 Score = 30.4 bits (67), Expect = 3.8 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Frame = +3 Query: 66 HYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGWGREGSGRPGLDGSTTAT 245 H +GSG R + D EG GD+G + A +A G GS G +TA Sbjct: 1213 HGFAEGSGQRSRLASMLDSDTEGEGDIGSTINPSVAMAIAGGPLAPGSRTSISQGPSTAA 1272 Query: 246 RLTGNGLSSVGE---VECV--VLKSLLKTWIQ 326 R +G LS+ + CV VLK+ T +Q Sbjct: 1273 R-SGCPLSAESSRTLLVCVLWVLKNAEPTLLQ 1303
>P27393:CO4A2_ASCSU Collagen alpha-2(IV) chain precursor - Ascaris suum (Pig roundworm)| (Ascaris lumbricoides) Length = 1763 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/64 (34%), Positives = 26/64 (40%) Frame = +3 Query: 39 SGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGWGREGSGRP 218 SGYP A R P G G P G + QR ++G P+ R G P Sbjct: 1410 SGYPGAPGRDGAPGKQGEPG------PMGPPGAQPIVQRGEKGEMGPMGAPGIRGEKGLP 1463 Query: 219 GLDG 230 GLDG Sbjct: 1464 GLDG 1467
>Q9WTP2:SPY4_MOUSE Sprouty homolog 4 - Mus musculus (Mouse)| Length = 300 Score = 30.4 bits (67), Expect = 3.9 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = -2 Query: 309 AMTSGPRTPLLQPKTSHCRLTESPSSTHPGRAG-HFLLC 196 A + PR LQPK HC+ + T P HFLLC Sbjct: 122 AEQASPRAVRLQPKVVHCKPLDLKGPTAPPELDKHFLLC 160
>O52262:CHEB1_PSEPU Chemotaxis response regulator protein-glutamate methylesterase of| group 1 operon - Pseudomonas putida Length = 374 Score = 30.0 bits (66), Expect = 5.0 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = -3 Query: 293 HALHFSNRRQAIAG*PSRRRRPIQAG---PATSFSAPAPGHGAGTS 165 H + SNRR P+ P+ A PA+SF++PAP A T+ Sbjct: 127 HTISRSNRRLGSYARPAPVAAPVPASSPAPASSFASPAPARPAATA 172
>Q5LQK6:ANMK_SILPO Anhydro-N-acetylmuramic acid kinase - Silicibacter pomeroyi| Length = 360 Score = 30.0 bits (66), Expect = 5.0 Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 10/120 (8%) Frame = +3 Query: 42 GYPVAGARHYRPQGSGVRGLRRGVWRC-DPEGTGDVGQREDEGSARPVAWGWGREGSGRP 218 G+ G R Y P+ V G W + E GD+ R A+ +A G EG Sbjct: 29 GFGPVGYRAYSPEERAVLRAGLGRWAGPEVEAAGDLVTR---AHAQALA---GFEGVDLV 82 Query: 219 GLDGSTTATRLTGNGLSSVGEVECVVLKSLLKTWIQPDFRSMERRIS---------FHFA 371 G G T A G G VG + L + L+ + DFRS + ++ FHFA Sbjct: 83 GFHGQTLAHEPRGRGTLQVG--DGAALAAALRRPVVWDFRSDDVQLGGEGAPLAPFFHFA 140
>Q00460:TMOE_PSEME Toluene-4-monooxygenase system protein E - Pseudomonas mendocina| Length = 327 Score = 30.0 bits (66), Expect = 5.1 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = +2 Query: 173 PPRGLGLGQRRKWPARPGWVDDGDSVNRQWLVFGW 277 P GLG +R W PGW + + +Q F W Sbjct: 178 PDAGLGEHERELWEKEPGWQGLRELMEKQLTAFDW 212
>P19837:SPD1_NEPCL Spidroin-1 - Nephila clavipes (Golden silk orbweaver)| Length = 747 Score = 29.6 bits (65), Expect = 6.5 Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 6/88 (6%) Frame = +3 Query: 18 VGSQADGSGYPVAGARHYRPQGSGVRGL----RRGVWR--CDPEGTGDVGQREDEGSARP 179 +GSQ G G AGA G+G RG +G R +G G G+ + Sbjct: 390 LGSQGAGRGGQGAGAAAAAAGGAGQRGYGGLGNQGAGRGGLGGQGAGAAAAAAAGGAGQG 449 Query: 180 VAWGWGREGSGRPGLDGSTTATRLTGNG 263 G G +G+GR G G+ A G G Sbjct: 450 GYGGLGNQGAGRGG-QGAAAAAGGAGQG 476 Score = 29.6 bits (65), Expect = 6.5 Identities = 26/87 (29%), Positives = 32/87 (36%) Frame = +3 Query: 18 VGSQADGSGYPVAGARHYRPQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGWG 197 +GSQ G G AGA G+G G+R +G G G G G Sbjct: 481 LGSQGAGRGGQGAGAAAAAAVGAGQEGIR-------GQGAGQGGY-----------GGLG 522 Query: 198 REGSGRPGLDGSTTATRLTGNGLSSVG 278 +GSGR GL G G + G Sbjct: 523 SQGSGRGGLGGQGAGAAAAAAGGAGQG 549
>Q9IDV8:GAG_HV1YB Gag polyprotein - Human immunodeficiency virus type 1 (isolate| YBF106 group N) (HIV-1) Length = 511 Score = 29.6 bits (65), Expect = 6.5 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = +3 Query: 102 RRGVWRCDPEGTGDVGQREDEGSARPVAWGWGREGSGRPG-LDGSTTATRLTGNGLSSVG 278 RRG W+C EG + + A + GW GRPG +TT T L S G Sbjct: 412 RRGCWKCGQEGHQMKDCKNEGXQANFLGKGWS-PFKGRPGNFPQTTTRREPTAPPLESYG 470 Query: 279 EVE 287 E Sbjct: 471 SQE 473
>O42350:CO1A2_RANCA Collagen alpha-2(I) chain precursor - Rana catesbeiana (Bull frog)| Length = 1355 Score = 29.6 bits (65), Expect = 6.5 Identities = 20/56 (35%), Positives = 26/56 (46%) Frame = +3 Query: 75 PQGSGVRGLRRGVWRCDPEGTGDVGQREDEGSARPVAWGWGREGSGRPGLDGSTTA 242 P +G RGL R P G+ G R +GS+ PV +G PGL G+ A Sbjct: 201 PGQAGARGLPGERGRIGPAGSA--GSRGSDGSSGPVGPAGPIGSAGAPGLPGAPGA 254
>P08640:MUC1_YEAST Mucin-like protein 1 precursor - Saccharomyces cerevisiae (Baker's| yeast) Length = 1367 Score = 29.6 bits (65), Expect = 6.6 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 345 PCFESRVESMSSAMTSGPRTPLLQPKTSHCRLTESPSSTHPG 220 PC S E+ S + T+ P TP+ ++ TE +ST PG Sbjct: 1012 PCSTSPSETASESTTTSPTTPVTTVVSTTVVTTEYSTSTKPG 1053
>Q30Z14:GLGB_DESDG 1,4-alpha-glucan-branching enzyme - Desulfovibrio desulfuricans| (strain G20) Length = 638 Score = 29.6 bits (65), Expect = 6.6 Identities = 21/65 (32%), Positives = 29/65 (44%) Frame = +1 Query: 220 AWMGRRRRLG*PAMACLRLEKWSAWS*SHC*RHGFNPTFEAWREEFLSILPYT*HNILTC 399 AWM RRR G P + + + A S RHG F W E +++PY T Sbjct: 141 AWMQRRREAGPPLQQPVSIYELHAGSWMR--RHGEGHPFVNWDELAGTLIPYVRDAGFTH 198 Query: 400 IRVIP 414 I ++P Sbjct: 199 IELMP 203
>Q9DBH5:LMAN2_MOUSE Vesicular integral-membrane protein VIP36 precursor - Mus musculus| (Mouse) Length = 358 Score = 29.3 bits (64), Expect = 8.5 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +3 Query: 186 WGWGREGSGRPGLDG 230 WGWG+ GRPGL G Sbjct: 12 WGWGQRCPGRPGLPG 26
>Q12907:LMAN2_HUMAN Vesicular integral-membrane protein VIP36 precursor - Homo sapiens| (Human) Length = 356 Score = 29.3 bits (64), Expect = 8.5 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = +3 Query: 186 WGWGREGSGRPGLDG 230 WGWGR GRPGL G Sbjct: 10 WGWGRRCLGRPGLLG 24
>Q2NI56:TRM1_METST N(2),N(2)-dimethylguanosine tRNA methyltransferase - Methanosphaera| stadtmanae (strain DSM 3091) Length = 390 Score = 29.3 bits (64), Expect = 8.7 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +1 Query: 154 GRMKEVPAPWPGAGAEKEVAGPAWMGR 234 G ++P P G E +VAGP W+G+ Sbjct: 256 GFAPKIPHTCPECGGEYDVAGPLWLGK 282
>P50168:DHI2_SHEEP Corticosteroid 11-beta-dehydrogenase isozyme 2 - Ovis aries (Sheep)| Length = 427 Score = 29.3 bits (64), Expect = 8.7 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 10/49 (20%) Frame = -2 Query: 255 RLTESPSSTHPGRAGHFLL----------CPSPRPRGGHFLHPPVDRRH 139 R++ SPSS+ P H+ L P PRP+ G H PV R H Sbjct: 360 RVSCSPSSSVPMCQEHYRLPAWPYLCPGHSPGPRPQTGPLSHCPVSRAH 408 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 104,070,728 Number of extensions: 2619013 Number of successful extensions: 7242 Number of sequences better than 10.0: 51 Number of HSP's gapped: 7175 Number of HSP's successfully gapped: 53 Length of query: 176 Length of database: 100,686,439 Length adjustment: 106 Effective length of query: 70 Effective length of database: 71,611,169 Effective search space: 5012781830 Effective search space used: 5012781830 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
