ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf102a21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|CP000459.1| Burkholderia cenocepacia HI2424 chromosome 2, com... 42 4.7
2ref|XM_001188391.1| PREDICTED: Strongylocentrotus purpuratus sim... 42 4.7
3ref|XM_001199000.1| PREDICTED: Strongylocentrotus purpuratus sim... 42 4.7
4gb|CP000379.1| Burkholderia cenocepacia AU 1054 chromosome 2, co... 42 4.7
5ref|XM_500163.1| Yarrowia lipolytica CLIB122, YALI0A17424g predi... 42 4.7
6emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 42 4.7

>gb|CP000459.1| Burkholderia cenocepacia HI2424 chromosome 2, complete genome
          Length = 2998664
 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 584    gaccagggctacttcatcacc 604
              |||||||||||||||||||||
Sbjct: 766593 gaccagggctacttcatcacc 766573



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>ref|XM_001188391.1| PREDICTED: Strongylocentrotus purpuratus similar to
            arginine/serine-rich splicing factor 4 (LOC760465), mRNA
          Length = 1544

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 596  ttcatcaccgaaatcgtcacc 616
            |||||||||||||||||||||
Sbjct: 1307 ttcatcaccgaaatcgtcacc 1287



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>ref|XM_001199000.1| PREDICTED: Strongylocentrotus purpuratus similar to
            arginine/serine-rich splicing factor 4 (LOC763123), mRNA
          Length = 1544

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 596  ttcatcaccgaaatcgtcacc 616
            |||||||||||||||||||||
Sbjct: 1307 ttcatcaccgaaatcgtcacc 1287



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>gb|CP000379.1| Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence
          Length = 2788459

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 584     gaccagggctacttcatcacc 604
               |||||||||||||||||||||
Sbjct: 1714528 gaccagggctacttcatcacc 1714548



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>ref|XM_500163.1| Yarrowia lipolytica CLIB122, YALI0A17424g predicted mRNA
          Length = 1599

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 360 gcaacgtcaagttctggcagc 380
           |||||||||||||||||||||
Sbjct: 626 gcaacgtcaagttctggcagc 646



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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 360     gcaacgtcaagttctggcagc 380
               |||||||||||||||||||||
Sbjct: 1798274 gcaacgtcaagttctggcagc 1798294


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 163,998,447
Number of extensions: 7841966
Number of successful extensions: 150804
Number of sequences better than 10.0: 6
Number of HSP's gapped: 150804
Number of HSP's successfully gapped: 6
Length of query: 1241
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1218
Effective length of database: 18,503,978,556
Effective search space: 22537845881208
Effective search space used: 22537845881208
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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