ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf105b19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1Q5I7K3:RS29_WHEAT 40S ribosomal protein S29 - Triticum aestivum ... 67 2e-11
2Q680P8:RS29_ARATH 40S ribosomal protein S29 - Arabidopsis thalia... 67 2e-11
3Q7XYB0:RS29_GRIJA 40S ribosomal protein S29 - Griffithsia japoni... 53 3e-07
4Q757G1:RS29_ASHGO 40S ribosomal protein S29 - Ashbya gossypii (Y... 49 4e-06
5Q4PM47:RS29_IXOSC 40S ribosomal protein S29 - Ixodes scapularis ... 45 6e-05
6Q6FWE3:RS29_CANGA 40S ribosomal protein S29 - Candida glabrata (... 45 6e-05
7P41058:RS29B_YEAST 40S ribosomal protein S29-B - Saccharomyces c... 45 6e-05
8P41057:RS29A_YEAST 40S ribosomal protein S29-A - Saccharomyces c... 45 6e-05
9O74329:RS29_SCHPO 40S ribosomal protein S29 - Schizosaccharomyce... 45 1e-04
10Q6F473:RS29_PLUXY 40S ribosomal protein S29 - Plutella xylostell... 44 1e-04
11Q9C2P2:RS29_NEUCR 40S ribosomal protein S29 - Neurospora crassa 44 1e-04
12Q5EMX3:RS29_MAGGR 40S ribosomal protein S29 - Magnaporthe grisea... 44 1e-04
13Q6BY86:RS29_DEBHA 40S ribosomal protein S29 - Debaryomyces hanse... 44 1e-04
14Q8WQI3:RS29_SPOFR 40S ribosomal protein S29 - Spodoptera frugipe... 44 2e-04
15Q4LAY1:RS29_SCALT 40S ribosomal protein S29 - Scarabaeus laticol... 44 2e-04
16Q5UAL3:RS29_BOMMO 40S ribosomal protein S29 - Bombyx mori (Silk ... 44 2e-04
17Q6CPG3:RS29_KLULA 40S ribosomal protein S29 - Kluyveromyces lact... 43 4e-04
18Q98SC7:RS29_GUITH 40S ribosomal protein S29A - Guillardia theta ... 42 6e-04
19Q5MGJ4:RS29_LONON 40S ribosomal protein S29 - Lonomia obliqua (M... 40 0.002
20Q9NB51:RS29_CULQU 40S ribosomal protein S29 - Culex quinquefasci... 40 0.002
21Q56FL2:RS29_LYSTE 40S ribosomal protein S29 - Lysiphlebus testac... 40 0.002
22P62275:RS29_RAT 40S ribosomal protein S29 - Rattus norvegicus (Rat) 40 0.003
23Q5R9J0:RS29_PONPY 40S ribosomal protein S29 - Pongo pygmaeus (Or... 40 0.003
24P62274:RS29_MOUSE 40S ribosomal protein S29 - Mus musculus (Mouse) 40 0.003
25P62273:RS29_HUMAN 40S ribosomal protein S29 - Homo sapiens (Human) 40 0.003
26P62276:RS29_BOVIN 40S ribosomal protein S29 - Bos taurus (Bovine) 40 0.003
27Q90YP2:RS29_ICTPU 40S ribosomal protein S29 - Ictalurus punctatu... 39 0.004
28Q6UZG0:RS29_HIPCM 40S ribosomal protein S29 - Hippocampus comes ... 39 0.004
29Q9VH69:RS29_DROME 40S ribosomal protein S29 - Drosophila melanog... 38 0.009
30Q6QAP6:RS29_PIG 40S ribosomal protein S29 - Sus scrofa (Pig) 35 0.079
31Q15648:PPRB_HUMAN Peroxisome proliferator-activated receptor-bin... 32 0.67
32Q925J9:PPRB_MOUSE Peroxisome proliferator-activated receptor-bin... 32 0.88
33P06357:RR3_TOBAC Chloroplast 30S ribosomal protein S3 - Nicotian... 29 4.3
34Q33BZ3:RR3_NICTO Chloroplast 30S ribosomal protein S3 - Nicotian... 29 4.3
35Q3C1L6:RR3_NICSY Chloroplast 30S ribosomal protein S3 - Nicotian... 29 4.3
36Q8S8V5:RR3_ATRBE Chloroplast 30S ribosomal protein S3 - Atropa b... 29 4.3
37P39846:PPS2_BACSU Peptide synthetase 2 - Bacillus subtilis 29 4.3
38Q06R93:RR3_JASNU Chloroplast 30S ribosomal protein S3 - Jasminum... 29 5.7
39Q1KXS0:RR3_HELAN Chloroplast 30S ribosomal protein S3 - Helianth... 29 5.7
40Q8SQG9:NHRF2_RABIT Na(+)/H(+) exchange regulatory cofactor NHE-R... 29 5.7
41P16376:7UP2_DROME Steroid receptor seven-up, isoform A - Drosoph... 29 5.7
42Q2VEE2:RR3_SOLTU Chloroplast 30S ribosomal protein S3 - Solanum ... 28 7.4
43Q2MIE9:RR3_SOLBU Chloroplast 30S ribosomal protein S3 - Solanum ... 28 7.4
44Q9JHS2:HIF3A_RAT Hypoxia-inducible factor 3 alpha - Rattus norve... 28 7.4
45Q18GG3:RS14_HALWD 30S ribosomal protein S14P - Haloquadratum wal... 28 9.6
46Q0ZIY0:RR3_VITVI Chloroplast 30S ribosomal protein S3 - Vitis vi... 28 9.6
47Q68RW8:RR3_PANGI Chloroplast 30S ribosomal protein S3 - Panax gi... 28 9.6
48Q4VZN0:RR3_CUCSA Chloroplast 30S ribosomal protein S3 - Cucumis ... 28 9.6 
>Q5I7K3:RS29_WHEAT 40S ribosomal protein S29 - Triticum aestivum (Wheat)|
          Length = 56
 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 34/56 (60%), Positives = 35/56 (62%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIKYR 183
           MGHSNVWNSHPKNYG GSRV                    QCFRS+AKDIGFIKYR
Sbjct: 1   MGHSNVWNSHPKNYGAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIKYR 56
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>Q680P8:RS29_ARATH 40S ribosomal protein S29 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 56

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 33/56 (58%), Positives = 35/56 (62%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIKYR 183
           MGHSNVWNSHPK YGPGSR+                    QCFRSNAK+IGFIKYR
Sbjct: 1   MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
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>Q7XYB0:RS29_GRIJA 40S ribosomal protein S29 - Griffithsia japonica (Red alga)|
          Length = 56

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 27/56 (48%), Positives = 29/56 (51%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIKYR 183
           MGH N+W SHP+ YG GSR                     QCFR  AKDIGFIKYR
Sbjct: 1   MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56
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>Q757G1:RS29_ASHGO 40S ribosomal protein S29 - Ashbya gossypii (Yeast) (Eremothecium|
           gossypii)
          Length = 56

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 26/56 (46%), Positives = 27/56 (48%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIKYR 183
           M H NVW SHP+NYG GSR                     QCFR  A DIGF KYR
Sbjct: 1   MAHENVWFSHPRNYGKGSRQCRVCASHSGLIRKYGLNICRQCFREKANDIGFHKYR 56
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>Q4PM47:RS29_IXOSC 40S ribosomal protein S29 - Ixodes scapularis (Black-legged tick)|
           (Deer tick)
          Length = 56

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIK 177
           MGH N+W SHP+ YGPGSR                     +CFR  A DIGF K
Sbjct: 1   MGHENIWYSHPRKYGPGSRYCRVCANHHGLIRKYGLNICRRCFRQYAADIGFKK 54
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>Q6FWE3:RS29_CANGA 40S ribosomal protein S29 - Candida glabrata (Yeast) (Torulopsis|
           glabrata)
          Length = 56

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 24/56 (42%), Positives = 26/56 (46%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIKYR 183
           M H NVW SHP+ +G GSR                     QCFR  A DIGF KYR
Sbjct: 1   MAHENVWFSHPRRFGKGSRQCRVCSSHTGLIRKYDLNICRQCFRERASDIGFNKYR 56
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>P41058:RS29B_YEAST 40S ribosomal protein S29-B - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 56

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 24/56 (42%), Positives = 26/56 (46%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIKYR 183
           M H NVW SHP+ +G GSR                     QCFR  A DIGF KYR
Sbjct: 1   MAHENVWFSHPRRFGKGSRQCRVCSSHTGLVRKYDLNICRQCFREKANDIGFHKYR 56
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>P41057:RS29A_YEAST 40S ribosomal protein S29-A - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 56

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 24/56 (42%), Positives = 26/56 (46%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIKYR 183
           M H NVW SHP+ YG GSR                     QCFR  A DIGF K+R
Sbjct: 1   MAHENVWFSHPRRYGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKANDIGFNKFR 56
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>O74329:RS29_SCHPO 40S ribosomal protein S29 - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 56

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 24/56 (42%), Positives = 26/56 (46%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIKYR 183
           M H NVW SHP+ YG GSR                     Q FR  A DIGF+KYR
Sbjct: 1   MAHENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVKYR 56
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>Q6F473:RS29_PLUXY 40S ribosomal protein S29 - Plutella xylostella (Diamondback moth)|
          Length = 56

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIK 177
           MGH+N+W SHP+ YG GSR                     QCFR  A DIGF K
Sbjct: 1   MGHANIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
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>Q9C2P2:RS29_NEUCR 40S ribosomal protein S29 - Neurospora crassa|
          Length = 56

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIKYR 183
           M H +VWNS P+ YG GSR                     QCFR  A DIGF K+R
Sbjct: 1   MSHESVWNSRPRTYGKGSRSCRVCTHSAGLIRKYGLNICRQCFREKANDIGFTKHR 56
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>Q5EMX3:RS29_MAGGR 40S ribosomal protein S29 - Magnaporthe grisea (Rice blast fungus)|
           (Pyricularia grisea)
          Length = 56

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIKYR 183
           M H +VWNS P+ YG G+R                     QCFR  A DIGF+K+R
Sbjct: 1   MSHDSVWNSRPRTYGKGARSCRVCTHRAGLIRKYGLDICRQCFREKAADIGFVKHR 56
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>Q6BY86:RS29_DEBHA 40S ribosomal protein S29 - Debaryomyces hansenii (Yeast)|
           (Torulaspora hansenii)
          Length = 56

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIKYR 183
           M H +VW SHP+N+G GSR                     QCFR  A DIGF K+R
Sbjct: 1   MAHESVWFSHPRNFGKGSRQCRVCSSHSGLIRKYDLNICRQCFRERASDIGFNKFR 56
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>Q8WQI3:RS29_SPOFR 40S ribosomal protein S29 - Spodoptera frugiperda (Fall armyworm)|
          Length = 56

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIK 177
           MGH+N+W SHP+ YG GSR                     QCFR  A DIGF K
Sbjct: 1   MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
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>Q4LAY1:RS29_SCALT 40S ribosomal protein S29 - Scarabaeus laticollis (Scarab dung|
           beetle)
          Length = 56

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIK 177
           MGH N+W SHP+ YG GSR                     QCFR  A DIGF K
Sbjct: 1   MGHQNIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
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>Q5UAL3:RS29_BOMMO 40S ribosomal protein S29 - Bombyx mori (Silk moth)|
          Length = 56

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIK 177
           MGH+N+W SHP+ YG GSR                     QCFR  A DIGF K
Sbjct: 1   MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
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>Q6CPG3:RS29_KLULA 40S ribosomal protein S29 - Kluyveromyces lactis (Yeast) (Candida|
           sphaerica)
          Length = 56

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIKYR 183
           M H NVW SHP+ +G GSR                     Q FR  A DIGF KYR
Sbjct: 1   MAHENVWYSHPRKFGKGSRQCRISGSHSGLIRKYGLNIDRQSFREKANDIGFYKYR 56
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>Q98SC7:RS29_GUITH 40S ribosomal protein S29A - Guillardia theta (Cryptomonas phi)|
          Length = 56

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 19/56 (33%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIKYR 183
           M H N+WN H + YG GSR                     QCFR  ++++GF KYR
Sbjct: 1   MSHKNIWNKHSRTYGKGSRGCRICGNRSGLIRKYGLSICRQCFREKSQNLGFDKYR 56
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>Q5MGJ4:RS29_LONON 40S ribosomal protein S29 - Lonomia obliqua (Moth)|
          Length = 56

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIK 177
           MGH+N+W SHP+ Y  GSR                     QCFR  A DIGF K
Sbjct: 1   MGHANIWYSHPRRYCQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
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>Q9NB51:RS29_CULQU 40S ribosomal protein S29 - Culex quinquefasciatus (Southern house|
           mosquito)
          Length = 56

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIK 177
           MG +++W SHP+ YG GSR                     QCFR  AKDIGF K
Sbjct: 1   MGFADLWYSHPRKYGQGSRFCRACSNNHGMIRKYGLNICRQCFREYAKDIGFRK 54
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>Q56FL2:RS29_LYSTE 40S ribosomal protein S29 - Lysiphlebus testaceipes (Greenbugs|
           aphid parastoid)
          Length = 56

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIK 177
           MG  N+W SHP+ YG GSR                     QCFR  A DIGF K
Sbjct: 1   MGFENIWFSHPRKYGQGSRSCRSCANKHGIIRKYGLNICRQCFREYASDIGFKK 54
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>P62275:RS29_RAT 40S ribosomal protein S29 - Rattus norvegicus (Rat)|
          Length = 56

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIK 177
           MGH  ++ SHP+ +G GSR                     QCFR  AKDIGFIK
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
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>Q5R9J0:RS29_PONPY 40S ribosomal protein S29 - Pongo pygmaeus (Orangutan)|
          Length = 56

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIK 177
           MGH  ++ SHP+ +G GSR                     QCFR  AKDIGFIK
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
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>P62274:RS29_MOUSE 40S ribosomal protein S29 - Mus musculus (Mouse)|
          Length = 56

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIK 177
           MGH  ++ SHP+ +G GSR                     QCFR  AKDIGFIK
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
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>P62273:RS29_HUMAN 40S ribosomal protein S29 - Homo sapiens (Human)|
          Length = 56

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIK 177
           MGH  ++ SHP+ +G GSR                     QCFR  AKDIGFIK
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
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>P62276:RS29_BOVIN 40S ribosomal protein S29 - Bos taurus (Bovine)|
          Length = 56

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIK 177
           MGH  ++ SHP+ +G GSR                     QCFR  AKDIGFIK
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
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>Q90YP2:RS29_ICTPU 40S ribosomal protein S29 - Ictalurus punctatus (Channel catfish)|
          Length = 56

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIK 177
           MGH  ++ SHP+ +G GSR                     QCFR  AKDIGF+K
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54
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>Q6UZG0:RS29_HIPCM 40S ribosomal protein S29 - Hippocampus comes (Tiger tail seahorse)|
          Length = 56

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSR-------------------VWQCFRSNAKDIGFIK 177
           MGH  ++ SHP+ +G GSR                     QCFR  AKDIGF+K
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54
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>Q9VH69:RS29_DROME 40S ribosomal protein S29 - Drosophila melanogaster (Fruit fly)|
          Length = 56

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIK 177
           MG + +W SHP+ YG GSR                     QCFR  A DIGF K
Sbjct: 1   MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
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>Q6QAP6:RS29_PIG 40S ribosomal protein S29 - Sus scrofa (Pig)|
          Length = 56

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 19/54 (35%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVW-------------------QCFRSNAKDIGFIK 177
           MG    + SHP+ +G GSR                     QCFR  AKDIGFIK
Sbjct: 1   MGPQGFYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
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>Q15648:PPRB_HUMAN Peroxisome proliferator-activated receptor-binding protein - Homo|
            sapiens (Human)
          Length = 1581

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 12   SHRTREPPFTRKEALGSGEDDGSLQRVELPPQELRPRIPRLAV 140
            SH +   PFT   + G  +  GS  R + PP    P IP++ +
Sbjct: 1023 SHSSSNRPFTPPTSTGGSKSPGSAGRSQTPPGVATPPIPKITI 1065
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>Q925J9:PPRB_MOUSE Peroxisome proliferator-activated receptor-binding protein - Mus|
            musculus (Mouse)
          Length = 1575

 Score = 31.6 bits (70), Expect = 0.88
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 12   SHRTREPPFTRKEALGSGEDDGSLQRVELPPQELRPRIPRLAV 140
            SH +   PFT   + G  +  GS  R + PP    P IP++ +
Sbjct: 1023 SHSSSNRPFTPPTSTGGSKSPGSSGRSQTPPGVATPPIPKITI 1065
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>P06357:RR3_TOBAC Chloroplast 30S ribosomal protein S3 - Nicotiana tabacum (Common|
           tobacco)
          Length = 218

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 70  TMGHSNVWNSHPKNYGPGSRVWQCFRSNAKD 162
           T GH ++W S PKNY  G +  Q  R   K+
Sbjct: 15  TQGHHSLWFSQPKNYSEGLQEDQKIRDCIKN 45
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>Q33BZ3:RR3_NICTO Chloroplast 30S ribosomal protein S3 - Nicotiana tomentosiformis|
           (Tobacco)
          Length = 218

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 70  TMGHSNVWNSHPKNYGPGSRVWQCFRSNAKD 162
           T GH ++W S PKNY  G +  Q  R   K+
Sbjct: 15  TQGHHSLWFSQPKNYSEGLQEDQKIRDCIKN 45
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>Q3C1L6:RR3_NICSY Chloroplast 30S ribosomal protein S3 - Nicotiana sylvestris (Wood|
           tobacco)
          Length = 218

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 70  TMGHSNVWNSHPKNYGPGSRVWQCFRSNAKD 162
           T GH ++W S PKNY  G +  Q  R   K+
Sbjct: 15  TQGHHSLWFSQPKNYSEGLQEDQKIRDCIKN 45
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>Q8S8V5:RR3_ATRBE Chloroplast 30S ribosomal protein S3 - Atropa belladonna|
           (Belladonna) (Deadly nightshade)
          Length = 218

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 70  TMGHSNVWNSHPKNYGPGSRVWQCFRSNAKD 162
           T GH ++W S PKNY  G +  Q  R   K+
Sbjct: 15  TQGHHSLWFSQPKNYSEGLQEDQKIRDCIKN 45
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>P39846:PPS2_BACSU Peptide synthetase 2 - Bacillus subtilis|
          Length = 2560

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 36   FTRKEALGSGEDDGSLQRVELPPQELRPRIP 128
            + ++EA   G+  GSL  +ELP  + RPR+P
Sbjct: 1229 YKKQEAYWLGQLGGSLPTLELPLDKTRPRLP 1259
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>Q06R93:RR3_JASNU Chloroplast 30S ribosomal protein S3 - Jasminum nudiflorum (Winter|
           jasmine)
          Length = 221

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 70  TMGHSNVWNSHPKNYGPGSRVWQCFR 147
           T GH ++W S PKNY  G +  Q  R
Sbjct: 15  TQGHHSLWISQPKNYSKGLKEDQNIR 40
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>Q1KXS0:RR3_HELAN Chloroplast 30S ribosomal protein S3 - Helianthus annuus (Common|
           sunflower)
          Length = 218

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 70  TMGHSNVWNSHPKNYGPGSRVWQCFRSNAKD 162
           T GH ++W + PKNY  G +  Q  R+  K+
Sbjct: 15  TQGHHSLWFAQPKNYSEGLQEDQKIRNYIKN 45
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>Q8SQG9:NHRF2_RABIT Na(+)/H(+) exchange regulatory cofactor NHE-RF2 - Oryctolagus|
           cuniculus (Rabbit)
          Length = 316

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +3

Query: 57  GSGEDDGSLQRVELPPQELRPRIPRLAVLP*QRQGYWLHQVPLKTAAYL 203
           GS   D   + V  PP+ELRPR+  L   P Q  G+ LH    +   Y+
Sbjct: 129 GSLSSDAGQKDVNGPPRELRPRLCHLRKGP-QGYGFNLHSDKSRPGQYI 176
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>P16376:7UP2_DROME Steroid receptor seven-up, isoform A - Drosophila melanogaster|
           (Fruit fly)
          Length = 746

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 131 SGSASVATPRILASSSTVEDCSLSSPGSEKRILHKIF 241
           S SASV+ P + ++ S    C   S GSE  +L  ++
Sbjct: 539 SASASVSAPLVPSAGSAFSSCQAKSAGSEMDLLASLY 575
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>Q2VEE2:RR3_SOLTU Chloroplast 30S ribosomal protein S3 - Solanum tuberosum (Potato)|
          Length = 218

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 70  TMGHSNVWNSHPKNYGPG 123
           T GH ++W S PKNY  G
Sbjct: 15  TQGHHSLWFSQPKNYSEG 32
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>Q2MIE9:RR3_SOLBU Chloroplast 30S ribosomal protein S3 - Solanum bulbocastanum (Wild|
           potato)
          Length = 218

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 70  TMGHSNVWNSHPKNYGPG 123
           T GH ++W S PKNY  G
Sbjct: 15  TQGHHSLWFSQPKNYSEG 32
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>Q9JHS2:HIF3A_RAT Hypoxia-inducible factor 3 alpha - Rattus norvegicus (Rat)|
          Length = 662

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +3

Query: 33  PFTRKEALGSGEDDGSLQRVELPPQELRPRI-PRLAVLP 146
           P TRK AL    +D  L+ +E  P +  PR+ P   +LP
Sbjct: 561 PRTRKRALAQSSEDKGLELLETKPPKRSPRLEPGSVLLP 599
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>Q18GG3:RS14_HALWD 30S ribosomal protein S14P - Haloquadratum walsbyi (strain DSM|
           16790)
          Length = 58

 Score = 28.1 bits (61), Expect = 9.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 136 QCFRSNAKDIGFIKYR 183
           QCFR  A+D+GF KYR
Sbjct: 43  QCFREVARDMGFKKYR 58
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>Q0ZIY0:RR3_VITVI Chloroplast 30S ribosomal protein S3 - Vitis vinifera (Grape)|
          Length = 218

 Score = 28.1 bits (61), Expect = 9.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 70  TMGHSNVWNSHPKNYGPGSRVWQCFRSNAKD 162
           T GH ++W + PKNY  G +  Q  R   K+
Sbjct: 15  TQGHHSLWFAQPKNYSKGLQEDQKIRDCIKN 45
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>Q68RW8:RR3_PANGI Chloroplast 30S ribosomal protein S3 - Panax ginseng (Korean|
           ginseng)
          Length = 219

 Score = 28.1 bits (61), Expect = 9.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 70  TMGHSNVWNSHPKNYGPGSRVWQCFRSNAKD 162
           T GH ++W + PKNY  G +  Q  R   K+
Sbjct: 15  TQGHHSLWFAQPKNYSEGLQEDQKIRDFIKN 45
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>Q4VZN0:RR3_CUCSA Chloroplast 30S ribosomal protein S3 - Cucumis sativus (Cucumber)|
          Length = 218

 Score = 28.1 bits (61), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 70  TMGHSNVWNSHPKNYGPG 123
           T GH ++W +HPK Y  G
Sbjct: 15  TQGHHSLWFAHPKKYSEG 32


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 55,375,010
Number of extensions: 1031849
Number of successful extensions: 2643
Number of sequences better than 10.0: 48
Number of HSP's gapped: 2612
Number of HSP's successfully gapped: 48
Length of query: 123
Length of database: 100,686,439
Length adjustment: 90
Effective length of query: 33
Effective length of database: 75,999,889
Effective search space: 2507996337
Effective search space used: 2507996337
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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