ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf104n16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK110409: | 32 | 0.61 | 2 | AK066896:Os03g0270200 | 32 | 0.61 | 3 | AK060809:Os03g0270200 | 32 | 0.61 | 4 | AK119235:Os09g0550000 | 30 | 2.3 | 5 | AK109197:Os10g0214400 | 30 | 2.3 | 6 | AK067716:Os09g0550000 | 30 | 2.3 | 7 | AK105968:Os07g0616600 | 29 | 3.9 | 8 | AK103952:Os07g0616600 | 29 | 3.9 | 9 | AK103326:Os01g0111900 | 29 | 3.9 | 10 | AK102735:Os07g0616600 | 29 | 3.9 | 11 | AK058308:Os07g0616600 | 29 | 3.9 | 12 | Os03g0242100:Os03g0242100 | 29 | 5.1 | 13 | AK121558:Os07g0654100 | 29 | 5.1 | 14 | AK106547:Os08g0101500 | 28 | 6.7 | 15 | AK103792:Os08g0101500 | 28 | 6.7 | 16 | AK071635:Os01g0155600 | 28 | 6.7 | 17 | AK060171:Os01g0155600 | 28 | 6.7 | 18 | Os11g0689400:Os11g0689400 | 28 | 8.8 | 19 | Os02g0665700:Os02g0665700 | 28 | 8.8 | 20 | Os02g0164200:Os02g0164200 | 28 | 8.8 |
|---|
>AK110409: | Length = 690 Score = 32.0 bits (71), Expect = 0.61 Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 5/110 (4%) Frame = +3 Query: 180 NLSPAWSRSLRHSLTPNQT--RGPSLNSRRNLTRH---PSPTLNYRQNQTHSQTLNRRQN 344 N+ P+ L P+Q R PS+ + +T PS L QNQ+H + Sbjct: 517 NMVPSPMAPQHTPLRPDQMHRRPPSIGMPQGMTSSGMGPSGMLPGVQNQSHGYPQSHMWQ 576 Query: 345 LTQRPSPTLNRRRNLTQHXXXXXXXXXXXXLNRCRSPIPSPRPAQSPLRA 494 +PSP L+++ N+ Q+ R P SP P QSP+ A Sbjct: 577 GPPQPSP-LSQQHNMQQYAQ--------------RPPQQSPLPQQSPMHA 611
>AK066896:Os03g0270200 | Length = 840 Score = 32.0 bits (71), Expect = 0.61 Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 10/110 (9%) Frame = +3 Query: 99 PSRCACSWPSSRQMFLASPSLGGCRS*NLSPAWSRSLRHSLTPNQTRGPSLNSRRNLTRH 278 P R PS + SPS G R + SP R S + R PS RR +R Sbjct: 339 PGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSRS 398 Query: 279 P----------SPTLNYRQNQTHSQTLNRRQNLTQRPSPTLNRRRNLTQH 398 P SP L + S R ++ +RPSP RRR+ + H Sbjct: 399 PGRRRSPSPRGSPRLRSPKRPRRSPISPRSRSANRRPSP--QRRRSTSPH 446
>AK060809:Os03g0270200 | Length = 580 Score = 32.0 bits (71), Expect = 0.61 Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 10/110 (9%) Frame = +3 Query: 99 PSRCACSWPSSRQMFLASPSLGGCRS*NLSPAWSRSLRHSLTPNQTRGPSLNSRRNLTRH 278 P R PS + SPS G R + SP R S + R PS RR +R Sbjct: 79 PGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSRS 138 Query: 279 P----------SPTLNYRQNQTHSQTLNRRQNLTQRPSPTLNRRRNLTQH 398 P SP L + S R ++ +RPSP RRR+ + H Sbjct: 139 PGRRRSPSPRGSPRLRSPKRPRRSPISPRSRSANRRPSP--QRRRSTSPH 186
>AK119235:Os09g0550000 | Length = 567 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/58 (27%), Positives = 24/58 (41%) Frame = +3 Query: 225 PNQTRGPSLNSRRNLTRHPSPTLNYRQNQTHSQTLNRRQNLTQRPSPTLNRRRNLTQH 398 PN T+ P L + HPS T + TH+ T + + +PS +T H Sbjct: 435 PNATQPPVLTTSSTALIHPSSTETSSEQPTHNGTASTSHSAGPQPSSAPYASSTITTH 492
>AK109197:Os10g0214400 | Length = 165 Score = 30.0 bits (66), Expect = 2.3 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 13/109 (11%) Frame = +3 Query: 96 LPSRCACSWPSSRQMFLASPSLGGCRS*-------------NLSPAWSRSLRHSLTPNQT 236 +P + S PS R+ SP G RS + SP W RS S TP + Sbjct: 1 MPRAVSRSPPSHRRRRSPSPRYGNRRSRRDRSRSPYTSTRRSPSPRWERS--QSPTPRRR 58 Query: 237 RGPSLNSRRNLTRHPSPTLNYRQNQTHSQTLNRRQNLTQRPSPTLNRRR 383 R P R+ R S T + N ++ + NL ++ +++R Sbjct: 59 RSPPSPRRQRRRRSRSNTSSTVNNSCSPSHVSEQNNLIEKQKEEGDKKR 107
>AK067716:Os09g0550000 | Length = 567 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/58 (27%), Positives = 24/58 (41%) Frame = +3 Query: 225 PNQTRGPSLNSRRNLTRHPSPTLNYRQNQTHSQTLNRRQNLTQRPSPTLNRRRNLTQH 398 PN T+ P L + HPS T + TH+ T + + +PS +T H Sbjct: 435 PNATQPPVLTTSSTALIHPSSTETSSEQPTHNGTASTSHSAGPQPSSAPYASSTITTH 492
>AK105968:Os07g0616600 | Length = 305 Score = 29.3 bits (64), Expect = 3.9 Identities = 18/41 (43%), Positives = 19/41 (46%) Frame = -1 Query: 284 AWVSGQVSARV*ARSAGLVWGQAVA*ASAPGWAQVSAPAPA 162 A + Q A A A G A A APGW Q SAP PA Sbjct: 256 AAIPAQAGADWTAAPAPAAGGWDTAAAPAPGWEQGSAPVPA 296
>AK103952:Os07g0616600 | Length = 305 Score = 29.3 bits (64), Expect = 3.9 Identities = 18/41 (43%), Positives = 19/41 (46%) Frame = -1 Query: 284 AWVSGQVSARV*ARSAGLVWGQAVA*ASAPGWAQVSAPAPA 162 A + Q A A A G A A APGW Q SAP PA Sbjct: 256 AAIPAQAGADWTAAPAPAAGGWDTAAAPAPGWEQGSAPVPA 296
>AK103326:Os01g0111900 | Length = 212 Score = 29.3 bits (64), Expect = 3.9 Identities = 25/92 (27%), Positives = 39/92 (42%) Frame = +3 Query: 105 RCACSWPSSRQMFLASPSLGGCRS*NLSPAWSRSLRHSLTPNQTRGPSLNSRRNLTRHPS 284 R AC P++R+ + C + +R R S TP + R R R P Sbjct: 56 RAACPAPAARRARTPARRRPTCCRLRST---TRRRRPSTTPRRPR-----RRWPTLRRPR 107 Query: 285 PTLNYRQNQTHSQTLNRRQNLTQRPSPTLNRR 380 R+ +T ++ RR+ T+RP+ T RR Sbjct: 108 RRPTARRRRTEAEATTRRRATTRRPATTRRRR 139
>AK102735:Os07g0616600 | Length = 305 Score = 29.3 bits (64), Expect = 3.9 Identities = 18/41 (43%), Positives = 19/41 (46%) Frame = -1 Query: 284 AWVSGQVSARV*ARSAGLVWGQAVA*ASAPGWAQVSAPAPA 162 A + Q A A A G A A APGW Q SAP PA Sbjct: 256 AAIPAQAGADWTAAPAPAAGGWDTAAAPAPGWEQGSAPVPA 296
>AK058308:Os07g0616600 | Length = 305 Score = 29.3 bits (64), Expect = 3.9 Identities = 18/41 (43%), Positives = 19/41 (46%) Frame = -1 Query: 284 AWVSGQVSARV*ARSAGLVWGQAVA*ASAPGWAQVSAPAPA 162 A + Q A A A G A A APGW Q SAP PA Sbjct: 256 AAIPAQAGADWTAAPAPAAGGWDTAAAPAPGWEQGSAPVPA 296
>Os03g0242100:Os03g0242100 | Length = 676 Score = 28.9 bits (63), Expect = 5.1 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -1 Query: 179 SAPAPAQRGRG*KHLPRRGPRASTARRQVPSSSPLTGQLAAHRSLKS 39 +APAPA G + PRR A RR+ ++P +G L A + S Sbjct: 95 TAPAPAHAASGPRKKPRRVSSAERGRRRATGAAP-SGSLKAEFDMLS 140
>AK121558:Os07g0654100 | Length = 109 Score = 28.9 bits (63), Expect = 5.1 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +1 Query: 604 LSSRLVMKS*PACICVGLGAKFVSGNGYSYTMYVSLRI 717 +S RL + S +C+CVG ++F+ +G S ++ LR+ Sbjct: 22 VSGRLSVPSSGSCLCVGSSSEFLIPSGLSSWLFAVLRM 59
>AK106547:Os08g0101500 | Length = 477 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 5/71 (7%) Frame = +3 Query: 201 RSLRHSLTPNQTRGPSLNSRRNLTR-----HPSPTLNYRQNQTHSQTLNRRQNLTQRPSP 365 R LR P+ GP L R L R P P L + + Q H+ Q R +P Sbjct: 127 RRLRPLPRPHPPHGPRLPLRPALRRAWHPARPGPQLRHGRRQVHTLRAGLGQGQVPRAAP 186 Query: 366 TLNRRRNLTQH 398 RR +H Sbjct: 187 LGGPRRPRARH 197
>AK103792:Os08g0101500 | Length = 475 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 5/71 (7%) Frame = +3 Query: 201 RSLRHSLTPNQTRGPSLNSRRNLTR-----HPSPTLNYRQNQTHSQTLNRRQNLTQRPSP 365 R LR P+ GP L R L R P P L + + Q H+ Q R +P Sbjct: 125 RRLRPLPRPHPPHGPRLPLRPALRRAWHPARPGPQLRHGRRQVHTLRAGLGQGQVPRAAP 184 Query: 366 TLNRRRNLTQH 398 RR +H Sbjct: 185 LGGPRRPRARH 195
>AK071635:Os01g0155600 | Length = 324 Score = 28.5 bits (62), Expect = 6.7 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 5/120 (4%) Frame = +3 Query: 150 SPSLGGCRS*NLSPAWSRSLRHSLTP-----NQTRGPSLNSRRNLTRHPSPTLNYRQNQT 314 SP G R + S + SRS S +P N+ R S R+ P + + R + Sbjct: 164 SPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGSPR 223 Query: 315 HSQTLNRRQNLTQRPSPTLNRRRNLTQHXXXXXXXXXXXXLNRCRSPIPSPRPAQSPLRA 494 S++ TQ P + R+ + N RSP +PR ++SP+RA Sbjct: 224 DSRSPKGSPRDTQSPRGSPRDSRSPRRSASPPNGRNRSPTPNASRSP--APRDSRSPMRA 281
>AK060171:Os01g0155600 | Length = 324 Score = 28.5 bits (62), Expect = 6.7 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 5/120 (4%) Frame = +3 Query: 150 SPSLGGCRS*NLSPAWSRSLRHSLTP-----NQTRGPSLNSRRNLTRHPSPTLNYRQNQT 314 SP G R + S + SRS S +P N+ R S R+ P + + R + Sbjct: 164 SPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGSPR 223 Query: 315 HSQTLNRRQNLTQRPSPTLNRRRNLTQHXXXXXXXXXXXXLNRCRSPIPSPRPAQSPLRA 494 S++ TQ P + R+ + N RSP +PR ++SP+RA Sbjct: 224 DSRSPKGSPRDTQSPRGSPRDSRSPRRSASPPNGRNRSPTPNASRSP--APRDSRSPMRA 281
>Os11g0689400:Os11g0689400 | Length = 2841 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = +3 Query: 150 SPSLGGCRS*NLSPAWSRSLRHSLTPNQTRGPSLNSRRNLTRHPSP 287 S S RS + S +WSRS S +P+++R S + R P P Sbjct: 1122 SRSRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGPARRPRP 1167
>Os02g0665700:Os02g0665700 | Length = 87 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = +3 Query: 99 PSRCACSWPSSRQMFLA-SPSLGGCRS 176 P+R CSWPS+R A + S G CR+ Sbjct: 53 PARTRCSWPSTRTSSTARAHSFGRCRT 79
>Os02g0164200:Os02g0164200 | Length = 140 Score = 28.1 bits (61), Expect = 8.8 Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 7/88 (7%) Frame = +3 Query: 255 SRRNLTRH--PSPTLNYRQNQTHSQTLNRRQNLTQRPSPTLNRRRNLTQHXXXXXXXXXX 428 SRR TR PSP + R + + + RP P RR + + Sbjct: 5 SRRRRTRATPPSPRPHARSRRVGPPRSPPTRPMPCRPPPYRRRRSSASWALWPAAGGGDR 64 Query: 429 XXL-----NRCRSPIPSPRPAQSPLRAL 497 L RC SP P+ RP+ SP+RAL Sbjct: 65 APLLPPPSARCSSP-PARRPSSSPVRAL 91 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,117,551 Number of extensions: 480643 Number of successful extensions: 1623 Number of sequences better than 10.0: 20 Number of HSP's gapped: 1612 Number of HSP's successfully gapped: 20 Length of query: 300 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 200 Effective length of database: 11,395,755 Effective search space: 2279151000 Effective search space used: 2279151000 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
