ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf101n05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9LUJ3:Y3268_ARATH Uncharacterized protein At3g22680 - Arabidops... 175 1e-43
2O53510:PKNL_MYCTU Probable serine/threonine-protein kinase pknL ... 32 3.4
3Q7TYY6:PKNL_MYCBO Probable serine/threonine-protein kinase pknL ... 32 3.4
4Q10661:DPY30_CAEEL Dosage compensation protein dpy-30 - Caenorha... 30 7.7

>Q9LUJ3:Y3268_ARATH Uncharacterized protein At3g22680 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 163
 Score =  175 bits (444), Expect = 1e-43
 Identities = 78/121 (64%), Positives = 98/121 (80%)
 Frame = +3

Query: 282 KGALIRRAEMYQEYMKHIPIPDHCSSLIPSTSWLGLGRSVKQLYEQPLHYLTNILLRQWD 461
           +G+L+RRAEMYQ+YMK +PIP +  SLIP TSW+GL  S+KQLY QPLHYLTN+LL++WD
Sbjct: 41  EGSLLRRAEMYQDYMKQVPIPTNRGSLIPFTSWVGLSISMKQLYGQPLHYLTNVLLQRWD 100

Query: 462 QQRVGSDNEHQPLDAIIHPMKAQALIWATEEIHRLTTSSDYLGKLWAKDPMYHAYIDPVF 641
           Q R G+D+E Q LD+IIHP KA+A IW  EEIHRLT S  ++  LW  DPMYH++IDP+F
Sbjct: 101 QSRFGTDSEEQRLDSIIHPTKAEATIWLVEEIHRLTPSHLHMALLWRSDPMYHSFIDPIF 160

Query: 642 P 644
           P
Sbjct: 161 P 161



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>O53510:PKNL_MYCTU Probable serine/threonine-protein kinase pknL - Mycobacterium|
           tuberculosis
          Length = 399

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +3

Query: 405 QLYEQPLHYLTNILLRQ---WDQQRVGSDNEHQPLDAIIHPMKAQALIWATEEIHRL 566
           QL  +P+H+ T  L RQ     +   GS+ EH+P+      +  +  IWA +   R+
Sbjct: 313 QLGAKPVHHPTRQLTRQPGDCSEPASGSEPEHEPITGQFAGIAIEEFIWARQHARRM 369



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>Q7TYY6:PKNL_MYCBO Probable serine/threonine-protein kinase pknL - Mycobacterium bovis|
          Length = 399

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +3

Query: 405 QLYEQPLHYLTNILLRQ---WDQQRVGSDNEHQPLDAIIHPMKAQALIWATEEIHRL 566
           QL  +P+H+ T  L RQ     +   GS+ EH+P+      +  +  IWA +   R+
Sbjct: 313 QLGAKPVHHPTRQLTRQPGDCSEPASGSEPEHEPITGQFAGIAIEEFIWARQHARRM 369



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>Q10661:DPY30_CAEEL Dosage compensation protein dpy-30 - Caenorhabditis elegans|
          Length = 123

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 333 IPIPDHCSSLIPSTSWLGLGRSVKQLYEQPLHYLTNILLRQWDQQRVGSDN 485
           +P   +  S +      GLG   K   E P+ +L N LLR+ D+    + N
Sbjct: 68  VPTRQYLDSTVVPILLQGLGALAKDRPENPIEFLANFLLREKDRYNAENQN 118


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 132,134,674
Number of extensions: 2942147
Number of successful extensions: 7628
Number of sequences better than 10.0: 4
Number of HSP's gapped: 7624
Number of HSP's successfully gapped: 4
Length of query: 253
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 142
Effective length of database: 70,239,694
Effective search space: 9974036548
Effective search space used: 9974036548
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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