ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf104k14 |
|---|---|
| Clone Library Name | barley_pub |
>Q9CYN9:RENR_MOUSE Renin receptor precursor - Mus musculus (Mouse)| Length = 350 Score = 40.0 bits (92), Expect = 0.026 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 27/301 (8%) Frame = +1 Query: 331 FDRPRAVFLMQIDGSHDSVDSFVSDAGSIYKT--------KIDGAKSAATGLTDKDELIV 486 F RPRA ++ + G VD AGS+ +D ++ L ++ +V Sbjct: 70 FHRPRATIMVMVKG----VDKLALPAGSVISYPLENAVPFSLDSVANSIHSLFSEETPVV 125 Query: 487 IRSDESSGSDVL----DNELTDLAIWLEGSYQKA---DSKLN-IPLKSGNSLTLLLKKEV 642 ++ S + ++ DL++ L + +S LN +PL S L EV Sbjct: 126 LQLAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSLLNSLPLNS-----LSRNNEV 180 Query: 643 DVEFASSLISLHKTIKSGIQVHEDFSGGIVSPAELLVCHFTGIKALEDEYGS-TEIVKQG 819 D+ F S L LH I S + H+ + SP +L G+ L YG +E + Sbjct: 181 DLLFLSELQVLHD-ISSLLSRHKHLAKDH-SP-DLYSLELAGLDELGKRYGEDSEQFRDA 237 Query: 820 AEVVQTALTKAFNQLQGAYNGKLVGLVISTKEASTSLASITDGPSSLHISRLLAEXXXXX 999 ++++ AL K + + Y G V +++ K TSL + SR + E Sbjct: 238 SKILVDALQKFADDMYSLYGGNAVVELVTVKSFDTSL---------VRKSRTILEAKQEN 288 Query: 1000 XXXXXXXXYLVRLSLAWITGIILLVSTLIGICL--------LMNMPLTKDTLLY--SNVK 1149 Y L + + ++L + +IG+ L + NM D+++Y +N K Sbjct: 289 TQSPYNLAYKYNLEYSVVFNLVLWI--MIGLALAVIITSYNIWNMDPGYDSIIYRMTNQK 346 Query: 1150 I 1152 I Sbjct: 347 I 347
>Q6AXS4:RENR_RAT Renin receptor precursor - Rattus norvegicus (Rat)| Length = 350 Score = 39.3 bits (90), Expect = 0.044 Identities = 67/299 (22%), Positives = 119/299 (39%), Gaps = 25/299 (8%) Frame = +1 Query: 331 FDRPRAVFLMQIDGSHDSVDSFVSDAGSIYKT--------KIDGAKSAATGLTDKDELIV 486 F RPRA ++ + G VD GS+ +D ++ L ++ +V Sbjct: 70 FHRPRATIMVTVKG----VDKLALPTGSVISYPLENAVPFSLDSVANSIHSLFSEETPVV 125 Query: 487 IRSDESSGSDVL----DNELTDLAIWLEGSYQKA---DSKLN-IPLKSGNSLTLLLKKEV 642 ++ S + ++ DL++ L + +S LN +PL S L EV Sbjct: 126 LQLAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLNSLPLNS-----LSRNNEV 180 Query: 643 DVEFASSLISLHKTIKSGIQVHEDFSGGIVSPAELLVCHFTGIKALEDEYGS-TEIVKQG 819 D+ F S L LH I S + H+ + SP +L G+ L YG +E + Sbjct: 181 DLLFLSELQVLHD-ISSLLSRHKHLAKDH-SP-DLYSLELAGLDELGKRYGEDSEQFRDA 237 Query: 820 AEVVQTALTKAFNQLQGAYNGKLVGLVISTKEASTSLASITDGPSSLHISRLLAEXXXXX 999 + ++ AL K + + Y G V +++ K TSL + SR + E Sbjct: 238 SRILVDALQKFADDMYSLYGGNAVVELVTVKSFDTSL---------VRKSRTILETKQEN 288 Query: 1000 XXXXXXXXYLVRLSLAWITGIILLVSTLIGICLLM------NMPLTKDTLLY--SNVKI 1152 Y L + + ++L + T + + +++ NM D+++Y +N KI Sbjct: 289 TQSPYNLAYKYNLEYSVVFNLVLWIMTGLALAVIITSYNIWNMDPGYDSIIYRMTNQKI 347
>Q5KCZ0:YSH1_CRYNE Endoribonuclease YSH1 - Cryptococcus neoformans (Filobasidiella| neoformans) Length = 773 Score = 35.8 bits (81), Expect = 0.49 Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 5/113 (4%) Frame = +1 Query: 553 LEGSYQKADSKLNIPL-KSGNSLTLLLKKEVDVEFASSLISL---HKTIKSGIQVHEDFS 720 L +Y ++NI K+ LTL ++E V+ SL + H T G+ V +DFS Sbjct: 456 LRDTYAAKGQEINIHTPKNCEPLTLTFRQERMVKAIGSLAATRPEHGTSVKGLLVSKDFS 515 Query: 721 GGIVSPAELLVCHFTGIKALEDEYGSTEIVKQGAEV-VQTALTKAFNQLQGAY 876 ++SPA+L FTG+ ST I KQG + V A+ + + L+G Y Sbjct: 516 YTLLSPADL--HDFTGLST------STIIQKQGVAISVDWAVVRWY--LEGMY 558
>Q9T1U2:VP06_BPAPS Putative protein p6 - Bacteriophage APSE-1| Length = 77 Score = 33.9 bits (76), Expect = 1.9 Identities = 23/72 (31%), Positives = 37/72 (51%) Frame = -1 Query: 671 EIKLDANSTSTSFLRSKVRLFPLFNGMFNLLSAF**DPSNQIAKSVSSLSRTSDPEDSSE 492 + K +ST T+FLR+ + LFPLF G + L S S+S+ + +SD S + Sbjct: 4 QAKSPTHSTLTNFLRTALILFPLFCGEYILTSG-----------SMSNRTASSDKHPSIK 52 Query: 491 RMTINSSLSVSP 456 I++ +SP Sbjct: 53 PSAISNFARISP 64
>Q5R563:RENR_PONPY Renin receptor precursor - Pongo pygmaeus (Orangutan)| Length = 350 Score = 33.9 bits (76), Expect = 1.9 Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 17/217 (7%) Frame = +1 Query: 331 FDRPRAVFLMQIDGSHDSVDSFVSDAGSIYKT--------KIDGAKSAATGLTDKDELIV 486 F RPRA ++ + G V+ GS+ +D ++ L ++ +V Sbjct: 69 FHRPRATVMVMVKG----VNKLALPPGSVISYPLENAVPFSLDSVANSIHSLFSEETPVV 124 Query: 487 IRSDESSGSDVL----DNELTDLAIWLEGS----YQKADSKLNIPLKSGNSLTLLLKKEV 642 ++ S + ++ DL++ L +Q+ ++PL S L EV Sbjct: 125 LQLAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNS-----LSRNNEV 179 Query: 643 DVEFASSLISLHKTIKSGIQVHEDFSGGIVSPAELLVCHFTGIKALEDEYGS-TEIVKQG 819 D+ F S L LH I S + H+ + SP +L G+ + YG +E + Sbjct: 180 DLLFLSELQVLHD-ISSLLSRHKHLAKDH-SP-DLYSLELAGLDEIGKRYGEDSEQFRDA 236 Query: 820 AEVVQTALTKAFNQLQGAYNGKLVGLVISTKEASTSL 930 ++++ AL K + + Y G V +++ K TSL Sbjct: 237 SKILVDALQKFADDMYSLYGGNAVVELVTVKSFDTSL 273
>O75787:RENR_HUMAN Renin receptor precursor - Homo sapiens (Human)| Length = 350 Score = 33.9 bits (76), Expect = 1.9 Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 17/217 (7%) Frame = +1 Query: 331 FDRPRAVFLMQIDGSHDSVDSFVSDAGSIYKT--------KIDGAKSAATGLTDKDELIV 486 F RPRA ++ + G V+ GS+ +D ++ L ++ +V Sbjct: 69 FHRPRATVMVMVKG----VNKLALPPGSVISYPLENAVPFSLDSVANSIHSLFSEETPVV 124 Query: 487 IRSDESSGSDVL----DNELTDLAIWLEGS----YQKADSKLNIPLKSGNSLTLLLKKEV 642 ++ S + ++ DL++ L +Q+ ++PL S L EV Sbjct: 125 LQLAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNS-----LSRNNEV 179 Query: 643 DVEFASSLISLHKTIKSGIQVHEDFSGGIVSPAELLVCHFTGIKALEDEYGS-TEIVKQG 819 D+ F S L LH I S + H+ + SP +L G+ + YG +E + Sbjct: 180 DLLFLSELQVLHD-ISSLLSRHKHLAKDH-SP-DLYSLELAGLDEIGKRYGEDSEQFRDA 236 Query: 820 AEVVQTALTKAFNQLQGAYNGKLVGLVISTKEASTSL 930 ++++ AL K + + Y G V +++ K TSL Sbjct: 237 SKILVDALQKFADDMYSLYGGNAVVELVTVKSFDTSL 273
>P12868:PEP5_YEAST Vacuolar membrane protein PEP5 - Saccharomyces cerevisiae (Baker's| yeast) Length = 1029 Score = 33.9 bits (76), Expect = 1.9 Identities = 40/200 (20%), Positives = 84/200 (42%), Gaps = 9/200 (4%) Frame = +1 Query: 331 FDRPRAVFLMQIDGSHDSVDSFVSDAGSIYKTKIDGAKSAATGLTDKDELIVIRSDESSG 510 FD R V L + D +++ A + +ID +S ATG+ + +V + ++ Sbjct: 690 FDEDRQVILTTL------YDLYLNLAQNDVPERIDDWRSRATGVLRESNKLVYSAASNNT 743 Query: 511 SDVLDNELTDLAIWLEGSYQKADSKLNIPLKS-GNSLTLLLKKEVDVEFASSLISLHKTI 687 S +DN + L ++ S A K I + S N E+D+ ++L++ Sbjct: 744 SKRVDNSIMLLISHMDQSSASAKDKTKIDIASFAND-----NPEMDLLSTFRAMTLNEEP 798 Query: 688 KSGIQVHEDFSGGIVSPAELLVCHFTGIKALEDEYGSTEIVK--------QGAEVVQTAL 843 + ++ E + ++ + +F K + E G E++K +G + + Sbjct: 799 STCLKFLEKYGTEEPKLLQVALSYFVSNKLIFKEMGGNEVLKEKVLRPIIEGERMPLLDI 858 Query: 844 TKAFNQLQGAYNGKLVGLVI 903 KA ++ A+ G + ++I Sbjct: 859 IKALSRTNVAHFGLIQDIII 878
>Q6UXY8:TMC5_HUMAN Transmembrane channel-like protein 5 - Homo sapiens (Human)| Length = 1006 Score = 32.7 bits (73), Expect = 4.1 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Frame = +1 Query: 652 FASSLISLHKTIKSGIQVHEDFSGGIVSPA---ELLVCHFTGIKALEDEYGSTEIVKQGA 822 F S L S+ K ++ +SGGI + V H +K L+ + STEI + + Sbjct: 540 FFSLLFSMAKYFRNNFINPHIYSGGITKLIFCWDFTVTHEKAVK-LKQKNLSTEIRENLS 598 Query: 823 EVVQTALTKAFNQLQGAYNGKLVGLVISTKEASTSLASI 939 E+ Q FNQL ++ +V V+ST A A++ Sbjct: 599 ELRQENSKLTFNQLLTRFSAYMVAWVVSTGVAIACCAAV 637
>Q20496:GDIR_CAEEL Probable rho GDP-dissociation inhibitor - Caenorhabditis elegans| Length = 191 Score = 32.7 bits (73), Expect = 4.1 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 2/110 (1%) Frame = +1 Query: 415 IYKTKIDGAKSAATGLTDKDEL-IVIRSDESSGSDVLDNELTDLAIWLEGSYQKADSKLN 591 +YK K+ G + + +K+ L +++RS E +L N T + L + +S L+ Sbjct: 39 VYKAKLLGQGTVI--VDEKNPLRVIVRSVE-----LLINGKTAQSFDLSDPAKLVNSDLS 91 Query: 592 IPLKSGNSLTLLLKKEVDVEFASSLISLHKTIKSGIQV-HEDFSGGIVSP 738 + +K G++ L V E S L HK +SGI V +E + G +P Sbjct: 92 VSIKEGSNYRLSFAFHVQREITSGLHYKHKVKRSGITVENEKYMMGSYAP 141
>Q61035:SYHC_MOUSE Histidyl-tRNA synthetase, cytoplasmic - Mus musculus (Mouse)| Length = 509 Score = 32.0 bits (71), Expect = 7.0 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 481 IVIRSDESSGSDVLDNELTDLAIWLEGSYQKADSKLNIPLKSGNSLTLLLKKEVDVEFAS 660 ++IR + G++V+D + +L L G Y + DSKL LK L L+ ++ V FA Sbjct: 79 VIIRCFKRHGAEVIDTPVFELKETLTGKYGE-DSKLIYDLKDQGGELLSLRYDLTVPFAR 137 Query: 661 SL 666 L Sbjct: 138 YL 139
>Q8K9C2:Y426_BUCAP UPF0004 protein BUsg_426 - Buchnera aphidicola subsp. Schizaphis| graminum Length = 439 Score = 31.6 bits (70), Expect = 9.2 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Frame = +1 Query: 529 ELTDLAIWLEGSYQKADSKLNIPLKSG-NSLTLLLKKEVDVEFASSLISLHKTIKSGIQV 705 E TD I + K S L++P++SG N + L+K+ E +I +S IQ+ Sbjct: 242 EFTDDIIEVYQDTPKLVSFLHLPVQSGSNRILQLMKRSYTTEEYEKIIEKLILARSNIQI 301 Query: 706 HEDFSGGIVSPAE 744 DF G S +E Sbjct: 302 SSDFIVGFPSESE 314
>Q5R4R2:SYHC_PONPY Histidyl-tRNA synthetase, cytoplasmic - Pongo pygmaeus (Orangutan)| Length = 509 Score = 31.6 bits (70), Expect = 9.2 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 481 IVIRSDESSGSDVLDNELTDLAIWLEGSYQKADSKLNIPLKSGNSLTLLLKKEVDVEFAS 660 ++IR + G++V+D + +L L G Y + DSKL LK L L+ ++ V FA Sbjct: 79 VIIRCFKRHGAEVIDTPVFELKETLMGKYGE-DSKLIYDLKDQGGELLSLRYDLTVPFAR 137 Query: 661 SL 666 L Sbjct: 138 YL 139
>P12081:SYHC_HUMAN Histidyl-tRNA synthetase, cytoplasmic - Homo sapiens (Human)| Length = 509 Score = 31.6 bits (70), Expect = 9.2 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 481 IVIRSDESSGSDVLDNELTDLAIWLEGSYQKADSKLNIPLKSGNSLTLLLKKEVDVEFAS 660 ++IR + G++V+D + +L L G Y + DSKL LK L L+ ++ V FA Sbjct: 79 VIIRCFKRHGAEVIDTPVFELKETLMGKYGE-DSKLIYDLKDQGGELLSLRYDLTVPFAR 137 Query: 661 SL 666 L Sbjct: 138 YL 139
>P28663:SNAB_MOUSE Beta-soluble NSF attachment protein - Mus musculus (Mouse)| Length = 298 Score = 31.6 bits (70), Expect = 9.2 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Frame = +1 Query: 358 MQIDGSHDSVDSFVSDAGSIYK-----TKIDGAKSAATGLTDKDELIVIRSDESSGSDVL 522 MQ+ HDS SFV DAG+ YK I+ +A TD + + +++ Sbjct: 73 MQLQSKHDSATSFV-DAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIY 131 Query: 523 DNELTDLAIWLEGSYQKAD 579 + EL D+ + Q AD Sbjct: 132 ETELVDIEKAIAHYEQSAD 150
>Q9H115:SNAB_HUMAN Beta-soluble NSF attachment protein - Homo sapiens (Human)| Length = 298 Score = 31.6 bits (70), Expect = 9.2 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Frame = +1 Query: 358 MQIDGSHDSVDSFVSDAGSIYK-----TKIDGAKSAATGLTDKDELIVIRSDESSGSDVL 522 MQ+ HDS SFV DAG+ YK I+ +A TD + + +++ Sbjct: 73 MQLQSKHDSATSFV-DAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIY 131 Query: 523 DNELTDLAIWLEGSYQKAD 579 + EL D+ + Q AD Sbjct: 132 ETELVDIEKAIAHYEQSAD 150
>P81126:SNAB_BOVIN Beta-soluble NSF attachment protein - Bos taurus (Bovine)| Length = 298 Score = 31.6 bits (70), Expect = 9.2 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Frame = +1 Query: 358 MQIDGSHDSVDSFVSDAGSIYK-----TKIDGAKSAATGLTDKDELIVIRSDESSGSDVL 522 MQ+ HDS SFV DAG+ YK I+ +A TD + + +++ Sbjct: 73 MQLQSKHDSATSFV-DAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIY 131 Query: 523 DNELTDLAIWLEGSYQKAD 579 + EL D+ + Q AD Sbjct: 132 ETELVDIEKAIAHYEQSAD 150 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 247,089,091 Number of extensions: 5156113 Number of successful extensions: 13121 Number of sequences better than 10.0: 16 Number of HSP's gapped: 13115 Number of HSP's successfully gapped: 16 Length of query: 505 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 387 Effective length of database: 68,319,629 Effective search space: 26439696423 Effective search space used: 26439696423 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
