ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf104i23 |
|---|---|
| Clone Library Name | barley_pub |
>P09799:VCLA_GOSHI Vicilin GC72-A precursor - Gossypium hirsutum (Upland cotton)| (Gossypium mexicanum) Length = 605 Score = 46.2 bits (108), Expect = 2e-04 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 4/149 (2%) Frame = +3 Query: 183 RPVDD--QGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKE 356 R DD Q + C +CQ + R + D+C R E + DP R+ Sbjct: 32 RSEDDPQQRYEDCRKRCQ---LETRGQTEQDKCEDRSETQLK----EEQQRDGEDPQRRY 84 Query: 357 Q-CVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQ-HHKVPARKKQCVD 530 Q C Q C + L E+ ++ + D+ C +CQ + P RK+QCV Sbjct: 85 QDCRQHCQQEERRLRPHCEQSCREQYEKQQQQQPDKQFKECQQRCQWQEQRPERKQQCVK 144 Query: 531 ECHRREHHHPSRAACERKCSHWRDPTRKE 617 EC + P + E K WR+ +E Sbjct: 145 ECREQYQEDPWKGERENK---WREEEEEE 170
>Q08696:MST2_DROHY Axoneme-associated protein mst101(2) - Drosophila hydei (Fruit fly)| Length = 1391 Score = 45.4 bits (106), Expect = 4e-04 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 12/154 (7%) Frame = +3 Query: 198 QGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQ--- 368 +G C + K A KK+C E +E ++ CE + ++ A K+QC + Sbjct: 963 KGKKKCKKLGKKSKRAAEKKKCA-EAAKKEKEAATKKKCEERAKKQKEAAEKKQCEERAK 1021 Query: 369 ---------QCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQ 521 QC L E + E +Q C+ + + K A KKQ Sbjct: 1022 KLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKLKEAAEQK--QCEERAKKLKEAAEKKQ 1079 Query: 522 CVDECHRREHHHPSRAACERKCSHWRDPTRKERC 623 C +E ++E + CE + ++ K++C Sbjct: 1080 C-EERAKKEKEAAEKKQCEERAKKLKEAAEKKQC 1112 Score = 44.3 bits (103), Expect = 0.001 Identities = 30/143 (20%), Positives = 56/143 (39%) Frame = +3 Query: 213 CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 392 C+ + + K A KKQC +E +E + CE + ++ A K+QC ++ + Sbjct: 1064 CEERAKKLKEAAEKKQC-EERAKKEKEAAEKKQCEERAKKLKEAAEKKQCEERAKK---- 1118 Query: 393 LXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAA 572 E+ AE+ C+ + K A KK+C E ++E + Sbjct: 1119 ----------EKEAAEK--------KRCEEAAKREKEAAEKKKCA-EAAKKEKEATEKQK 1159 Query: 573 CERKCSHWRDPTRKERCVQTCMR 641 C ++ K++C + R Sbjct: 1160 CAEAAKKEKEAAEKKKCAEAAKR 1182 Score = 38.9 bits (89), Expect = 0.039 Identities = 28/150 (18%), Positives = 56/150 (37%) Frame = +3 Query: 192 DDQGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQ 371 ++ +C + K KK+C +E ++E + CE+ ++ A K++C + Sbjct: 360 EEDEKKACKELAKKKKEADEKKKC-EEAANKEKKAAEKKKCEKAAKERKEAAEKKKCEE- 417 Query: 372 CMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREH 551 A + E + C+ ++ K A KK+C E ++E Sbjct: 418 ---------------------AAKKEKEAAERKKCEELAKNIKKAAEKKKC-KEAAKKEK 455 Query: 552 HHPSRAACERKCSHWRDPTRKERCVQTCMR 641 R CE + K++C +T + Sbjct: 456 EAAERKKCEELAKKIKKAAEKKKCEETAKK 485 Score = 38.1 bits (87), Expect = 0.067 Identities = 27/143 (18%), Positives = 52/143 (36%) Frame = +3 Query: 213 CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 392 C+ + K A KK+C +E +E R CE + A K++C + Sbjct: 575 CEKAAKERKEAAEKKKC-EEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKE-------- 625 Query: 393 LXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAA 572 A + E + + C + K A KK+C + ++E + Sbjct: 626 --------------AAKKEKEAAEREKCGELAKKIKKAAEKKKC-KKLAKKEKETAEKKK 670 Query: 573 CERKCSHWRDPTRKERCVQTCMR 641 CE+ ++ K++C + + Sbjct: 671 CEKAAKKRKEAAEKKKCAEAAKK 693 Score = 35.4 bits (80), Expect = 0.44 Identities = 27/143 (18%), Positives = 52/143 (36%) Frame = +3 Query: 213 CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 392 C + K A KK+C ++ + + CE+ ++ A K++C + + Sbjct: 511 CKKLAKKEKETAEKKKC-EKAAKKRKEAAEKKKCEKAAKKRKEAAEKKKCEKSAKK---- 565 Query: 393 LXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAA 572 R A E + C+ + K A KK+C +E ++E R Sbjct: 566 -----------RKEAAEKK-------KCEKAAKERKEAAEKKKC-EEAAKKEKEVAERKK 606 Query: 573 CERKCSHWRDPTRKERCVQTCMR 641 CE + K++C + + Sbjct: 607 CEELAKKIKKAAEKKKCKEAAKK 629 Score = 35.4 bits (80), Expect = 0.44 Identities = 29/151 (19%), Positives = 56/151 (37%), Gaps = 8/151 (5%) Frame = +3 Query: 213 CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 392 C+ + K A KK+C E +E + CE ++ A +++C + + Sbjct: 671 CEKAAKKRKEAAEKKKCA-EAAKKEKEAAEKKKCEEAAKKEKEAAERKKCEELAKKIKKA 729 Query: 393 LXXXXXXXXIERPHAEEVEVDDQSNDSCDH------KCQH--HKVPARKKQCVDECHRRE 548 ++ A E + N KC+ K A KK+C E ++E Sbjct: 730 AEKKKCKKLAKKKKAGEKNKLKKGNKKGKKALKEKKKCRELAKKKAAEKKKC-KEAAKKE 788 Query: 549 HHHPSRAACERKCSHWRDPTRKERCVQTCMR 641 + CE+ ++ K++C +T + Sbjct: 789 KEAAEKKKCEKTAKKRKEEAEKKKCEKTAKK 819
>P09801:VCLB_GOSHI Vicilin C72 precursor - Gossypium hirsutum (Upland cotton)| (Gossypium mexicanum) Length = 588 Score = 45.1 bits (105), Expect = 6e-04 Identities = 31/127 (24%), Positives = 46/127 (36%), Gaps = 13/127 (10%) Frame = +3 Query: 243 PARKKQCVDECHSREHHHPSRASCERKCSHW------------RDPARK-EQCVQQCMRY 383 P R + C C + CE C DP R+ E+C Q+C + Sbjct: 38 PKRYEDCRRRCEWDTRGQKEQQQCEESCKSQYGEKDQQQRHRPEDPQRRYEECQQECRQQ 97 Query: 384 GLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPS 563 ++R E+ + Q + H Q + P RK+QCV EC R +P Sbjct: 98 EERQRPQCQQRCLKRFEQEQQQSQRQFQECQQHCHQQEQRPERKQQCVRECRERYQENPW 157 Query: 564 RAACERK 584 R E + Sbjct: 158 RREREEE 164 Score = 34.7 bits (78), Expect = 0.74 Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 6/114 (5%) Frame = +3 Query: 312 CERKCSHWRDPARKEQCVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQ 491 C R+C W +KEQ QQC + RP E + + C +C+ Sbjct: 44 CRRRCE-WDTRGQKEQ--QQCEESCKSQYGEKDQQQRHRP-----EDPQRRYEECQQECR 95 Query: 492 HHKVPARKKQCVDECHRREHHHPSRAA-----CERKCSHWRD-PTRKERCVQTC 635 + ++ QC C +R ++ C++ C P RK++CV+ C Sbjct: 96 QQE-ERQRPQCQQRCLKRFEQEQQQSQRQFQECQQHCHQQEQRPERKQQCVREC 148
>Q08695:MST1_DROHY Axoneme-associated protein mst101(1) - Drosophila hydei (Fruit fly)| Length = 344 Score = 39.3 bits (90), Expect = 0.030 Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 3/146 (2%) Frame = +3 Query: 213 CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 392 C + K A KK+C E +E + C ++ A K++C + + Sbjct: 109 CAEAAKKEKEAAEKKKCA-EAAKKEKEAAEKKKCAEAAKKEKEAAEKKKCAEAAKKEKEA 167 Query: 393 LXXXXXXXXIERPHAEEVEVDDQS---NDSCDHKCQHHKVPARKKQCVDECHRREHHHPS 563 ++ E+ +Q C + K A KK+C +E ++E Sbjct: 168 AEKKKCAEAAQKKKCAELAKKEQEAAEKKKCAEAAKKEKEAAEKKKC-EERAKKEKEAAE 226 Query: 564 RAACERKCSHWRDPTRKERCVQTCMR 641 + CE + ++ K++C + + Sbjct: 227 KKKCEERAKKEKEAAEKKKCAEAAKK 252
>Q9SPL5:AMP21_MACIN Vicilin-like antimicrobial peptides 2-1 precursor - Macadamia| integrifolia (Macadamia nut) Length = 666 Score = 36.2 bits (82), Expect = 0.26 Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 14/157 (8%) Frame = +3 Query: 192 DDQGNDSCDIKCQHHKVPARKKQCVDECHSR-------------EHHHPSRASCERKCSH 332 D Q + C +C + + ++CV +C R E C+R+C Sbjct: 32 DRQEYEECKRQCMQLETSGQMRRCVSQCDKRFEEDIDWSKYDNQEDPQTECQQCQRRCRQ 91 Query: 333 WRDPARKEQ-CVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPA 509 R++Q C ++C E E +++ N D + Q+ Sbjct: 92 QESGPRQQQYCQRRCK--------------------EICEEEEEYNRQRDPQQQY----- 126 Query: 510 RKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKER 620 +QC C RRE C+++C + ++++ Sbjct: 127 --EQCQKHCQRRETEPRHMQTCQQRCERRYEKEKRKQ 161
>Q1KL17:HXABA_FUGRU Homeobox protein Hox-A11a - Fugu rubripes (Japanese pufferfish)| (Takifugu rubripes) Length = 283 Score = 34.7 bits (78), Expect = 0.74 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = -3 Query: 612 SLSGLSNGYTSSRKPPCSGDDAPVC----GTRPRTASSSPELYDVGTCGRTSRC 463 S +G S T +++P + +DA C PR SSSPEL G R RC Sbjct: 163 STNGFSGDKTPTKQPSSAPEDAQACRDTEAKEPREESSSPELSSDGQRTRKKRC 216
>Q9SPL4:AMP22_MACIN Vicilin-like antimicrobial peptides 2-2 precursor - Macadamia| integrifolia (Macadamia nut) Length = 666 Score = 34.3 bits (77), Expect = 0.97 Identities = 27/157 (17%), Positives = 56/157 (35%), Gaps = 14/157 (8%) Frame = +3 Query: 192 DDQGNDSCDIKCQHHKVPARKKQCVDECHSR-------------EHHHPSRASCERKCSH 332 D Q + C +C + + ++CV +C R + C+R+C Sbjct: 32 DRQEYEECKRQCMQLETSGQMRRCVSQCDKRFEEDIDWSKYDNQDDPQTDCQQCQRRCRQ 91 Query: 333 WRDPARKEQ-CVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPA 509 R++Q C ++C E E +++ N D + Q+ Sbjct: 92 QESGPRQQQYCQRRCK--------------------EICEEEEEYNRQRDPQQQY----- 126 Query: 510 RKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKER 620 +QC + C R E C+++C + ++++ Sbjct: 127 --EQCQERCQRHETEPRHMQTCQQRCERRYEKEKRKQ 161
>O76840:PPN1_CAEEL Papilin precursor - Caenorhabditis elegans| Length = 2167 Score = 33.1 bits (74), Expect = 2.2 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +3 Query: 210 SCDIKCQHHKVPARKKQCV----DECHSREHHHPSRASCERKCSHWRDPA 347 SC + + K QCV C+ +H S+ +CER C WR+ A Sbjct: 1739 SCYDNILRWRFDSEKSQCVTFMYSGCNPNANHFTSQETCERACGKWRNVA 1788 Score = 32.7 bits (73), Expect = 2.8 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 4/52 (7%) Frame = +3 Query: 459 QSNDSCDHKCQHHKVPARKKQCV----DECHRREHHHPSRAACERKCSHWRD 602 + SC + + K QCV C+ +H S+ CER C WR+ Sbjct: 1735 EQRGSCYDNILRWRFDSEKSQCVTFMYSGCNPNANHFTSQETCERACGKWRN 1786
>Q9SPL3:AMP23_MACIN Vicilin-like antimicrobial peptides 2-3 precursor - Macadamia| integrifolia (Macadamia nut) Length = 625 Score = 33.1 bits (74), Expect = 2.2 Identities = 26/147 (17%), Positives = 53/147 (36%), Gaps = 14/147 (9%) Frame = +3 Query: 222 KCQHHKVPARKKQCVDECHSR-------------EHHHPSRASCERKCSHWR-DPARKEQ 359 +C + + ++CV +C R E C+R+C DP +++ Sbjct: 1 QCMQLETSGQMRRCVSQCDKRFEEDIDWSKYDNQEDPQTECQQCQRRCRQQESDPRQQQY 60 Query: 360 CVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECH 539 C ++C E E +++ N D + Q+ +QC C Sbjct: 61 CQRRCK--------------------EICEEEEEYNRQRDPQQQY-------EQCQKRCQ 93 Query: 540 RREHHHPSRAACERKCSHWRDPTRKER 620 RRE C+++C + ++++ Sbjct: 94 RRETEPRHMQICQQRCERRYEKEKRKQ 120
>O35652:LHX8_MOUSE LIM/homeobox protein Lhx8 - Mus musculus (Mouse)| Length = 367 Score = 32.7 bits (73), Expect = 2.8 Identities = 17/59 (28%), Positives = 27/59 (45%) Frame = -1 Query: 995 SSCGKHT*QTNLLKEGKGTEFHGALF*ERHRQSCCYCKLLVFYSHAFAVIASKTYTRAY 819 S CG+H T+ ++ KG +H A F +C CK + FA++ K R + Sbjct: 158 SRCGRHIHSTDWVRRAKGNVYHLACF------ACFSCKRQLSTGEEFALVEEKVLCRVH 210
>Q43358:VCL_THECC Vicilin precursor - Theobroma cacao (Cacao) (Cocoa)| Length = 525 Score = 32.3 bits (72), Expect = 3.7 Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 1/104 (0%) Frame = +3 Query: 312 CERKC-SHWRDPARKEQCVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKC 488 C+R+C S + +EQC Q+C ER + E+ + Sbjct: 45 CQRRCESEATEEREQEQCEQRC----------------EREYKEQ------------QRQ 76 Query: 489 QHHKVPARKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKER 620 Q ++ + +QC C ++ + C+RKC W +ER Sbjct: 77 QEEELQRQYQQCQGRCQEQQQGQREQQQCQRKC--WEQYKEQER 118
>Q62288:TICN1_MOUSE Testican-1 precursor - Mus musculus (Mouse)| Length = 442 Score = 31.2 bits (69), Expect = 8.2 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Frame = +3 Query: 195 DQGNDSC-DIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQC 362 D D C +KC HKV + C SR+H P + HW P+ +C Sbjct: 83 DPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAHKHWLGPSNLVKC 139
>P11827:GLCAP_SOYBN Beta-conglycinin, alpha' chain precursor - Glycine max (Soybean)| Length = 639 Score = 31.2 bits (69), Expect = 8.2 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 13/113 (11%) Frame = +3 Query: 285 EHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQS 464 E +PS C R C+ +D R + C +C + I RP + E + Q Sbjct: 29 EKQNPSHNKCLRSCNSEKDSYRNQACHARCNLLKVEEEEECEEGQIPRPRPQHPERERQQ 88 Query: 465 NDSCD-------------HKCQHHKVPARKKQCVDECHRREHHHPSRAACERK 584 + + Q H+ +++ E HR+E H + + E + Sbjct: 89 HGEKEEDEGEQPRPFPFPRPRQPHQEEEHEQKEEHEWHRKEEKHGGKGSEEEQ 141 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 164,866,476 Number of extensions: 3142450 Number of successful extensions: 8577 Number of sequences better than 10.0: 13 Number of HSP's gapped: 8529 Number of HSP's successfully gapped: 21 Length of query: 377 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 262 Effective length of database: 69,142,514 Effective search space: 18115338668 Effective search space used: 18115338668 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
