ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf104h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O60346:PHLPP_HUMAN PH domain leucine-rich repeat-containing prot... 34 1.3
2Q28139:NCKX1_BOVIN Sodium/potassium/calcium exchanger 1 - Bos ta... 32 3.7
3Q9L0L7:MURB_STRCO UDP-N-acetylenolpyruvoylglucosamine reductase ... 32 6.4
4P29091:BGLS_SCHCO Beta-glucosidase - Schizophyllum commune (Brac... 32 6.4
5P97838:DLGP3_RAT Disks large-associated protein 3 - Rattus norve... 31 8.3
6Q6PFD5:DLGP3_MOUSE Disks large-associated protein 3 - Mus muscul... 31 8.3
7Q8IVL6:P3H3_HUMAN Prolyl 3-hydroxylase 3 precursor - Homo sapien... 31 8.3
8Q05215:EGR4_HUMAN Early growth response protein 4 - Homo sapiens... 31 8.3

>O60346:PHLPP_HUMAN PH domain leucine-rich repeat-containing protein phosphatase - Homo|
           sapiens (Human)
          Length = 1717
 Score = 33.9 bits (76), Expect = 1.3
 Identities = 27/84 (32%), Positives = 37/84 (44%)
 Frame = -1

Query: 421 PKVVPSETGTILDGSWPEHGALEAALWSCATQSTPRRLASRGTLKAPVPSRAPTALLSYS 242
           P+ + S  G + +GS  E  A  AA+     QSTP R       KAP P   PT  +   
Sbjct: 420 PRAIDSPGGAVREGSCEEKAA--AAVAPGGLQSTPGRSGVTAE-KAPPPPPPPTLYVQLH 476

Query: 241 PSTFLHLIATWRPLKASSALMFFL 170
             T   L A  +PL+  +  +F L
Sbjct: 477 GETTRRLEAEEKPLQIQNDYLFQL 500



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>Q28139:NCKX1_BOVIN Sodium/potassium/calcium exchanger 1 - Bos taurus (Bovine)|
          Length = 1216

 Score = 32.3 bits (72), Expect = 3.7
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
 Frame = -1

Query: 451 GVAMLSPATMPKVVPSETGTILDGSWPEH-GALEAALWSCATQSTPR-----RLASRGTL 290
           G A ++PA      P+ TGT   G   E   A  + + +  TQS P      RL +RG +
Sbjct: 117 GTASITPAIPNNYSPTPTGT---GKVKEDTSATPSGVLNHYTQSRPMVNSYTRLTARGEV 173

Query: 289 KAPVPSRAPTALLSYSPSTFLHLIATWRPLKASSALMFFLVQSAHLARPTTT 134
           K+  P+++      YSPS    ++ ++ P    S LM   +  +H   P TT
Sbjct: 174 KSSRPTQSRGKEEKYSPSPLGRMVNSYAP----STLM--TMPRSHGITPRTT 219



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>Q9L0L7:MURB_STRCO UDP-N-acetylenolpyruvoylglucosamine reductase - Streptomyces|
           coelicolor
          Length = 383

 Score = 31.6 bits (70), Expect = 6.4
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
 Frame = +3

Query: 189 EEAFKG--LQVAIKCKNVDGEYESKAVGALDGTGAFSVPLDANLRGVDCVAQLHSAASNA 362
           ++ F G  L +A +   +DG     A G +  T A +  ++A L GV+C+A +  +A   
Sbjct: 92  DKGFDGTALHIATRGFRLDGTTLELAAGEI-WTDAVARTVEAGLAGVECLAGIPGSAGAT 150

Query: 363 PCS-----GQEPSKIVPVSEGTTFGIVAGDNIATPSA 458
           P       GQE S    ++E T +   +G+ +A  +A
Sbjct: 151 PIQNVGAYGQEVS--ATITEVTAYDRRSGETVALSNA 185



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>P29091:BGLS_SCHCO Beta-glucosidase - Schizophyllum commune (Bracket fungus)|
          Length = 192

 Score = 31.6 bits (70), Expect = 6.4
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 484 VMDWHSGDAADGVAMLSPATMPKVVPSET-GTILDGSWPEHGALEAALWS 338
           ++ WH GDA   V  ++ A    +V   T G I+  +W EH  ++A +WS
Sbjct: 70  LLAWHDGDAL--VQAVADANENTIVAVNTVGAIITEAWIEHPNVKAVVWS 117



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>P97838:DLGP3_RAT Disks large-associated protein 3 - Rattus norvegicus (Rat)|
          Length = 977

 Score = 31.2 bits (69), Expect = 8.3
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
 Frame = +3

Query: 210 QVAIKCKNVDGEYESKAVGALDGTGAFSVPLDANLRGV--------DCVAQLHSAAS 356
           Q+   C +V GE ES+AV ALD  G F +   + LR +        DC+  L + AS
Sbjct: 468 QLEAVCGSVFGELESQAVDALDLPGCFRMRSHSYLRAIQAGCSQDDDCLPLLAAPAS 524



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>Q6PFD5:DLGP3_MOUSE Disks large-associated protein 3 - Mus musculus (Mouse)|
          Length = 977

 Score = 31.2 bits (69), Expect = 8.3
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
 Frame = +3

Query: 210 QVAIKCKNVDGEYESKAVGALDGTGAFSVPLDANLRGV--------DCVAQLHSAAS 356
           Q+   C +V GE ES+AV ALD  G F +   + LR +        DC+  L + AS
Sbjct: 468 QLEAVCGSVFGELESQAVDALDLPGCFRMRSHSYLRAIQAGCSQDDDCLPLLAAPAS 524



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>Q8IVL6:P3H3_HUMAN Prolyl 3-hydroxylase 3 precursor - Homo sapiens (Human)|
          Length = 736

 Score = 31.2 bits (69), Expect = 8.3
 Identities = 34/115 (29%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
 Frame = -1

Query: 481 MDWHSGDAADGVAMLSPATMPKVVPSETGTILDGSWPEHGALEAALW--SCATQSTPRRL 308
           +D  +  AAD  A L    +    P        GSW E   L AAL    C TQ   RRL
Sbjct: 75  LDCGASCAADPGAALPAVLLGAPEPDSGPGPTQGSW-ERQLLRAALRRADCLTQCAARRL 133

Query: 307 ASRGTLKAPVPSRAPTALLSYSPSTFL---HLIATWRPLKASSALMFFLVQSAHL 152
              G  +  V S    A     P  +L   +       L A++A  FF+    HL
Sbjct: 134 GPGGAARLRVGSALRDAFRRREPYNYLQRAYYQLKKLDLAAAAAHTFFVANPMHL 188



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>Q05215:EGR4_HUMAN Early growth response protein 4 - Homo sapiens (Human)|
          Length = 486

 Score = 31.2 bits (69), Expect = 8.3
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
 Frame = -1

Query: 469 SGDAADGVAMLSPATMPKVVPSETGTILDGSWPEHGALEAALWS-------CATQSTPRR 311
           SGD AD   +  PA  P    S +G+    + PEH     AL++        A    P  
Sbjct: 60  SGDLADSCFLEGPAPTPPPGLSYSGSFFIQAVPEHPHDPEALFNLMSGILGLAPFPGPEA 119

Query: 310 LASRGTLKAPVPSRAPTALLSYSPSTF 230
            ASR  L AP P+    ALL   P  +
Sbjct: 120 AASRSPLDAPFPA-GSDALLPGPPDLY 145


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 149,840,136
Number of extensions: 2983319
Number of successful extensions: 10352
Number of sequences better than 10.0: 8
Number of HSP's gapped: 10344
Number of HSP's successfully gapped: 8
Length of query: 380
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 265
Effective length of database: 69,142,514
Effective search space: 18322766210
Effective search space used: 18322766210
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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