ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf101g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os04g0102500:Os04g0102500 56 5e-08
2AK105244:Os03g0335200 29 6.5

>Os04g0102500:Os04g0102500 |
          Length = 281
 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 37/86 (43%), Positives = 43/86 (50%)
 Frame = +3

Query: 534 DAKPCTWYHTLSLPFTQGCSINHQRQTCKTSVSNDSTCFGVNQCIQCVQVRHAQGLHNAE 713
           DA P T   T   P  + C   +   T   +  N  T    +QC     VRHAQG+HN E
Sbjct: 57  DANPPT---TAMYPLHR-CKTIYLVTTSSYAFPNTPTTAHRSQCT----VRHAQGVHNVE 108

Query: 714 EEKDVVDYTLPALLDAQLTPLGWSQV 791
            EKD   Y  P L DA LTPLGW+QV
Sbjct: 109 GEKDHSAYMSPQLFDAHLTPLGWNQV 134



 Score = 34.7 bits (78), Expect = 0.12
 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 515 ALYPAHRCKTVYLVPHSESTF--YPRM*HQSSAT 610
           A+YP HRCKT+YLV  S   F   P   H+S  T
Sbjct: 64  AMYPLHRCKTIYLVTTSSYAFPNTPTTAHRSQCT 97



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>AK105244:Os03g0335200 |
          Length = 315

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +3

Query: 477 YVWQEWRRPAPSQPCIPRTDAKPCTWYHTLSLPFTQGCSINHQRQTCKTSVSN-DSTCFG 653
           +VW+++ +        PR+       Y+  +    QGC    Q Q C+   SN D T +G
Sbjct: 95  HVWRKYGQKDIQNSPYPRS-------YYRCTHKLDQGCGARRQTQRCEADPSNYDITYYG 147

Query: 654 VNQC 665
            + C
Sbjct: 148 EHTC 151


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 31,434,607
Number of extensions: 723379
Number of successful extensions: 1857
Number of sequences better than 10.0: 2
Number of HSP's gapped: 1856
Number of HSP's successfully gapped: 3
Length of query: 359
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 257
Effective length of database: 11,315,673
Effective search space: 2908127961
Effective search space used: 2908127961
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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