| Clone Name | FLbaf101g03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os04g0102500:Os04g0102500 | 56 | 5e-08 | 2 | AK105244:Os03g0335200 | 29 | 6.5 |
|---|
>Os04g0102500:Os04g0102500 | Length = 281 Score = 55.8 bits (133), Expect = 5e-08 Identities = 37/86 (43%), Positives = 43/86 (50%) Frame = +3 Query: 534 DAKPCTWYHTLSLPFTQGCSINHQRQTCKTSVSNDSTCFGVNQCIQCVQVRHAQGLHNAE 713 DA P T T P + C + T + N T +QC VRHAQG+HN E Sbjct: 57 DANPPT---TAMYPLHR-CKTIYLVTTSSYAFPNTPTTAHRSQCT----VRHAQGVHNVE 108 Query: 714 EEKDVVDYTLPALLDAQLTPLGWSQV 791 EKD Y P L DA LTPLGW+QV Sbjct: 109 GEKDHSAYMSPQLFDAHLTPLGWNQV 134 Score = 34.7 bits (78), Expect = 0.12 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +2 Query: 515 ALYPAHRCKTVYLVPHSESTF--YPRM*HQSSAT 610 A+YP HRCKT+YLV S F P H+S T Sbjct: 64 AMYPLHRCKTIYLVTTSSYAFPNTPTTAHRSQCT 97
>AK105244:Os03g0335200 | Length = 315 Score = 28.9 bits (63), Expect = 6.5 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Frame = +3 Query: 477 YVWQEWRRPAPSQPCIPRTDAKPCTWYHTLSLPFTQGCSINHQRQTCKTSVSN-DSTCFG 653 +VW+++ + PR+ Y+ + QGC Q Q C+ SN D T +G Sbjct: 95 HVWRKYGQKDIQNSPYPRS-------YYRCTHKLDQGCGARRQTQRCEADPSNYDITYYG 147 Query: 654 VNQC 665 + C Sbjct: 148 EHTC 151 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,434,607 Number of extensions: 723379 Number of successful extensions: 1857 Number of sequences better than 10.0: 2 Number of HSP's gapped: 1856 Number of HSP's successfully gapped: 3 Length of query: 359 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 257 Effective length of database: 11,315,673 Effective search space: 2908127961 Effective search space used: 2908127961 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)