ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf104f13 |
|---|---|
| Clone Library Name | barley_pub |
>Q9NX01:TXN4B_HUMAN Thioredoxin-like protein 4B - Homo sapiens (Human)| Length = 149 Score = 189 bits (481), Expect = 1e-47 Identities = 86/150 (57%), Positives = 118/150 (78%) Frame = +2 Query: 47 SVVLPTLRRKREVDAAIRDTLDKVLVLRFGRASDAACLQLDDVLAKSSWDISKFATVALV 226 S +LP L K+EVD AI+ T +KVLVLRFGR D CLQLDD+L+K+S D+SK A + LV Sbjct: 2 SFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLV 61 Query: 227 DMDSEEIQVYVDYFDITLVPATIFFFNAHHMKMDSGTPDHTKWIGSFSSKQDFIDVVEAV 406 D+D + VY YFDI+ +P+T+FFFN HMK+D G+PDHTK++GSF +KQDFID++E + Sbjct: 62 DVD--QTAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 Query: 407 FRGAMKGKLIVSCPLPPERIPRFQLLFKDV 496 +RGAM+GKLIV P+ P+ IP++ LL++D+ Sbjct: 120 YRGAMRGKLIVQSPIDPKNIPKYDLLYQDI 149
>Q8BUH1:TXN4B_MOUSE Thioredoxin-like protein 4B - Mus musculus (Mouse)| Length = 149 Score = 181 bits (460), Expect = 3e-45 Identities = 83/150 (55%), Positives = 114/150 (76%) Frame = +2 Query: 47 SVVLPTLRRKREVDAAIRDTLDKVLVLRFGRASDAACLQLDDVLAKSSWDISKFATVALV 226 S +LP L K+EVD AI+ T +K LVLRFGR D CLQLDD+L+K+S D+SK A + L Sbjct: 2 SFLLPKLTSKKEVDQAIKSTAEKGLVLRFGRDEDPVCLQLDDILSKTSADLSKMAAIYLG 61 Query: 227 DMDSEEIQVYVDYFDITLVPATIFFFNAHHMKMDSGTPDHTKWIGSFSSKQDFIDVVEAV 406 D+D VY YFDI+ +P+T+FFFN HMK D G+PDHTK++GSF +KQDFID++E + Sbjct: 62 DVD--HTPVYTQYFDISYIPSTVFFFNGQHMKGDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 Query: 407 FRGAMKGKLIVSCPLPPERIPRFQLLFKDV 496 +RGAM+GKLIV P+ P+ +P++ LL++D+ Sbjct: 120 YRGAMRGKLIVQSPIDPKNVPKYDLLYQDI 149
>Q06819:DIB1_YEAST Spliceosomal protein DIB1 - Saccharomyces cerevisiae (Baker's| yeast) Length = 143 Score = 89.7 bits (221), Expect = 1e-17 Identities = 48/136 (35%), Positives = 79/136 (58%) Frame = +2 Query: 41 MGSVVLPTLRRKREVDAAIRDTLDKVLVLRFGRASDAACLQLDDVLAKSSWDISKFATVA 220 M SV+LP LR VD AI +++V+RFGR +D C+ +D++L+ + + FA + Sbjct: 1 MASVLLPQLRTGWHVDQAIVTETKRLVVIRFGRKNDRQCMIMDELLSSIAERVRNFAVIY 60 Query: 221 LVDMDSEEIQVYVDYFDITLVPATIFFFNAHHMKMDSGTPDHTKWIGSFSSKQDFIDVVE 400 L D+D E+ + + +++T +FF++ HM D GT ++ K KQ+ ID++E Sbjct: 61 LCDID--EVSDFDEMYELTDPMTVMFFYHNKHMMCDFGTGNNNKLNFIVDDKQEMIDILE 118 Query: 401 AVFRGAMKGKLIVSCP 448 +FRGA K K +V P Sbjct: 119 TIFRGARKNKGLVVSP 134
>P83877:TXN4A_MOUSE Thioredoxin-like protein 4A - Mus musculus (Mouse)| Length = 142 Score = 84.3 bits (207), Expect = 6e-16 Identities = 45/134 (33%), Positives = 76/134 (56%) Frame = +2 Query: 47 SVVLPTLRRKREVDAAIRDTLDKVLVLRFGRASDAACLQLDDVLAKSSWDISKFATVALV 226 S +LP L +VD AI D+V+V+RFG D C+++D+VL + + FA + LV Sbjct: 2 SYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLV 61 Query: 227 DMDSEEIQVYVDYFDITLVPATIFFFNAHHMKMDSGTPDHTKWIGSFSSKQDFIDVVEAV 406 D+ E+ + +++ +FFF H+ +D GT ++ K + KQ+ +D++E V Sbjct: 62 DI--TEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 Query: 407 FRGAMKGKLIVSCP 448 +RGA KG+ +V P Sbjct: 120 YRGARKGRGLVVSP 133
>P83876:TXN4A_HUMAN Thioredoxin-like protein 4A - Homo sapiens (Human)| Length = 142 Score = 84.3 bits (207), Expect = 6e-16 Identities = 45/134 (33%), Positives = 76/134 (56%) Frame = +2 Query: 47 SVVLPTLRRKREVDAAIRDTLDKVLVLRFGRASDAACLQLDDVLAKSSWDISKFATVALV 226 S +LP L +VD AI D+V+V+RFG D C+++D+VL + + FA + LV Sbjct: 2 SYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLV 61 Query: 227 DMDSEEIQVYVDYFDITLVPATIFFFNAHHMKMDSGTPDHTKWIGSFSSKQDFIDVVEAV 406 D+ E+ + +++ +FFF H+ +D GT ++ K + KQ+ +D++E V Sbjct: 62 DI--TEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 Query: 407 FRGAMKGKLIVSCP 448 +RGA KG+ +V P Sbjct: 120 YRGARKGRGLVVSP 133
>Q75BD8:DIB1_ASHGO Spliceosomal protein DIB1 - Ashbya gossypii (Yeast) (Eremothecium| gossypii) Length = 143 Score = 83.6 bits (205), Expect = 1e-15 Identities = 45/136 (33%), Positives = 77/136 (56%) Frame = +2 Query: 41 MGSVVLPTLRRKREVDAAIRDTLDKVLVLRFGRASDAACLQLDDVLAKSSWDISKFATVA 220 MGSV LP L VD AI ++++V+RFG SD +C+ +D++L + + FA + Sbjct: 1 MGSVFLPHLHSGWHVDQAIVTEEERLVVIRFGSDSDRSCMLMDEILYSIAEKVVNFAAIY 60 Query: 221 LVDMDSEEIQVYVDYFDITLVPATIFFFNAHHMKMDSGTPDHTKWIGSFSSKQDFIDVVE 400 + D + E+ + + +++ +FF+ HM+ D GT ++ K +KQ+ ID++E Sbjct: 61 VCD--TTEVPDFNEMYELQDPMTVMFFYKNKHMRCDFGTGNNNKMNFVVDNKQEMIDIIE 118 Query: 401 AVFRGAMKGKLIVSCP 448 VFRGA + K +V P Sbjct: 119 TVFRGARRNKGLVVSP 134
>P87215:DIMI_SCHPO Mitosis protein dim1 - Schizosaccharomyces pombe (Fission yeast)| Length = 142 Score = 83.2 bits (204), Expect = 1e-15 Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 1/135 (0%) Frame = +2 Query: 47 SVVLPTLRRKREVDAAIRDTLDKVLVLRFGRASDAACLQLDDVLAKSSWDISKFATVALV 226 S LP L VD AI ++++V+RFGR D C++ D+VL + + + A + LV Sbjct: 2 SYFLPHLHSGWHVDQAILSEQERLVVIRFGRDHDEECIKQDEVLYRIAEKVVNMAVIYLV 61 Query: 227 DMDS-EEIQVYVDYFDITLVPATIFFFNAHHMKMDSGTPDHTKWIGSFSSKQDFIDVVEA 403 D+D + + +D T + +FF+ HM +D GT ++ K KQ+ ID++E Sbjct: 62 DIDEVPDFNKMYELYDRTTI---MFFYRNKHMMIDLGTGNNNKINWPLEDKQEMIDIIET 118 Query: 404 VFRGAMKGKLIVSCP 448 +FRGA KGK +V P Sbjct: 119 IFRGARKGKGLVISP 133
>Q6FMI2:DIB1_CANGA Spliceosomal protein DIB1 - Candida glabrata (Yeast) (Torulopsis| glabrata) Length = 142 Score = 78.2 bits (191), Expect = 4e-14 Identities = 42/122 (34%), Positives = 69/122 (56%) Frame = +2 Query: 83 VDAAIRDTLDKVLVLRFGRASDAACLQLDDVLAKSSWDISKFATVALVDMDSEEIQVYVD 262 VD AI ++++V+RFGR +D C+ +D++LA + + F + L D+D E+ + D Sbjct: 13 VDQAIVTEEERLVVVRFGRTADRECMLMDEMLASVAEKVRNFVAIYLCDID--EVPDFND 70 Query: 263 YFDITLVPATIFFFNAHHMKMDSGTPDHTKWIGSFSSKQDFIDVVEAVFRGAMKGKLIVS 442 +++ +FF+ HM D GT ++ K KQ+ ID++E +FRGA K K IV Sbjct: 71 MYELNDNMCLMFFYKNKHMMCDFGTGNNNKMNFLPDDKQELIDIMETIFRGARKNKGIVV 130 Query: 443 CP 448 P Sbjct: 131 SP 132
>Q5Z2R1:SYC1_NOCFA Cysteinyl-tRNA synthetase 1 - Nocardia farcinica| Length = 467 Score = 37.0 bits (84), Expect = 0.11 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = -1 Query: 526 YVENVCFLSLDILEKELESGYPLWWKWARHYQFAFHRA 413 ++ NV + IL K E+G P WW+WA Y+ AF RA Sbjct: 64 FIRNVTDIDDKILNKAAEAGRP-WWEWAATYERAFDRA 100
>Q9JLZ1:TXNL2_RAT Thioredoxin-like protein 2 - Rattus norvegicus (Rat)| Length = 337 Score = 36.2 bits (82), Expect = 0.18 Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 2/105 (1%) Frame = +2 Query: 77 REVDAAIRDTLDKVLVLRFGRASDAACLQLDDVLAKSSWDISKFATVALVDMDSEEIQVY 256 R+ + +R +LV+ F C+Q++DV+A+ + + V+ V +++E + Sbjct: 22 RQFEELLRLKTKSLLVVHFWAPWAPQCVQMNDVMAELA---KEHPHVSFVKLEAEAVPEV 78 Query: 257 VDYFDITLVPATIFFFNAHHMKMDSG--TPDHTKWIGSFSSKQDF 385 + ++I+ VP +FF N+ + G P+ TK + S F Sbjct: 79 SEKYEISSVPTFLFFKNSQKVDRLDGAHAPELTKKVQRHVSSGSF 123
>Q9CQM9:TXNL2_MOUSE Thioredoxin-like protein 2 - Mus musculus (Mouse)| Length = 337 Score = 35.0 bits (79), Expect = 0.41 Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Frame = +2 Query: 29 ERGEMGSVVLPTLRRKREVDAAIRDTLDKVLVLRFGRASDAACLQLDDVLAKSSWDISKF 208 E GE +V + + ++ + +R +LV+ F C+Q++DV+A+ + + Sbjct: 7 EAGE-AAVAVVEVGSAQQFEELLRLKTKSLLVVHFWAPWAPQCVQMNDVMAELA---KEH 62 Query: 209 ATVALVDMDSEEIQVYVDYFDITLVPATIFFFNAHHMKMDSG--TPDHTK 352 V+ V +++E + + ++I+ VP +FF N+ + G P+ TK Sbjct: 63 PHVSFVKLEAEAVPEVSEKYEISSVPTFLFFKNSQKVDRLDGAHAPELTK 112
>Q743W3:SYC1_MYCPA Cysteinyl-tRNA synthetase 1 - Mycobacterium paratuberculosis| Length = 468 Score = 32.3 bits (72), Expect = 2.6 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 Query: 526 YVENVCFLSLDILEKELESGYPLWWKWARHYQFAFHRA 413 ++ NV + IL K +G P WW+WA Y+ AF A Sbjct: 68 FIRNVTDIDDKILNKAAAAGRP-WWEWAATYERAFSAA 104
>Q63065:PDK1_RAT [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,| mitochondrial precursor - Rattus norvegicus (Rat) Length = 434 Score = 32.3 bits (72), Expect = 2.6 Identities = 20/88 (22%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Frame = +2 Query: 167 DDVLAKSSWDISKFATVALVD-MDSEEIQVYVDYFDITLVPATIFFFNAHHMKMDS-GTP 340 +DV+ + ++++ VD + S+ +Q ++D F ++ + + N H + G+P Sbjct: 150 NDVIPTMAQGVTEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLL-NQHSLLFGGKGSP 208 Query: 341 DHTKWIGSFSSKQDFIDVVEAVFRGAMK 424 H K IGS + D ++V++ + A + Sbjct: 209 SHRKHIGSINPNCDVVEVIKDGYENARR 236
>Q8BFP9:PDK1_MOUSE [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,| mitochondrial precursor - Mus musculus (Mouse) Length = 434 Score = 32.3 bits (72), Expect = 2.6 Identities = 20/88 (22%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Frame = +2 Query: 167 DDVLAKSSWDISKFATVALVD-MDSEEIQVYVDYFDITLVPATIFFFNAHHMKMDS-GTP 340 +DV+ + ++++ VD + S+ +Q ++D F ++ + + N H + G+P Sbjct: 150 NDVIPTMAQGVTEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLL-NQHSLLFGGKGSP 208 Query: 341 DHTKWIGSFSSKQDFIDVVEAVFRGAMK 424 H K IGS + D ++V++ + A + Sbjct: 209 SHRKHIGSINPNCDVVEVIKDGYENARR 236
>P0C150:COX10_MAGGR Protoheme IX farnesyltransferase, mitochondrial precursor -| Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea) Length = 552 Score = 30.8 bits (68), Expect = 7.7 Identities = 21/63 (33%), Positives = 29/63 (46%) Frame = -2 Query: 222 NATVANLDMSQEDFARTSSSWRQAASEARPNRRTRTLSSVSRMAASTSRFRRSVGSTTDP 43 NATVA D+ TS+ Q E P+RR + + AAS S S + T P Sbjct: 113 NATVAAADIPPS----TSTPRPQVDEELPPHRRRQAARRTAEQAASASSNAPSEAAQTTP 168 Query: 42 ISP 34 ++P Sbjct: 169 VTP 171 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 143,881,346 Number of extensions: 3107062 Number of successful extensions: 7028 Number of sequences better than 10.0: 15 Number of HSP's gapped: 7015 Number of HSP's successfully gapped: 15 Length of query: 297 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 185 Effective length of database: 69,965,399 Effective search space: 12943598815 Effective search space used: 12943598815 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
