ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf104f13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001074259.1| Oryza sativa (japonica cultivar-group) Os11g... 553 e-154
2dbj|AK067692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 553 e-154
3gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome... 192 1e-45
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 192 1e-45
5gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 151 5e-33
6gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence 143 1e-30
7emb|CT987188.1| partial cDNA sequence from a Lambda ZAP II norma... 133 1e-27
8ref|NM_113385.2| Arabidopsis thaliana catalytic/ electron transp... 60 1e-05
9gb|BT011726.1| Arabidopsis thaliana At3g24730 gene, complete cds 60 1e-05
10dbj|AK176149.1| Arabidopsis thaliana mRNA for hypothetical prote... 60 1e-05
11dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, ... 60 1e-05
12emb|BX825801.1|CNS0A68X Arabidopsis thaliana Full-length cDNA Co... 60 1e-05
13gb|AC119741.3| Homo sapiens 3 BAC RP11-570O24 (Roswell Park Canc... 46 0.22
14gb|AC117464.4| Homo sapiens 3 BAC RP11-412N9 (Roswell Park Cance... 46 0.22
15emb|BX936384.22| Zebrafish DNA sequence from clone CH211-76M11 i... 46 0.22
16gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 44 0.85
17ref|XM_001226053.1| Chaetomium globosum CBS 148.51 hypothetical ... 42 3.4
18gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome... 42 3.4
19gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 3.4
20gb|AC087332.6| Mus Musculus Chromosome 2 RP23-58L18, complete se... 42 3.4
21dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
23gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 42 3.4
24gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 3.4
25emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb... 42 3.4
26emb|AL845470.6| Mouse DNA sequence from clone RP23-204G5 on chro... 42 3.4
27dbj|AB007404.1| Oryza sativa gene for alanine aminotransferase, ... 42 3.4

>ref|NM_001074259.1| Oryza sativa (japonica cultivar-group) Os11g0297900 (Os11g0297900)
           mRNA, complete cds
          Length = 916
 Score =  553 bits (279), Expect = e-154
 Identities = 410/456 (89%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatggggtcggtggtgctgccgacgctgcggcggaagcgggaggtcgacgccgccatccg 99
           ||||||||||| | |||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 97  gatggggtcggcgctgctgccgacgctgcggcggaagccggaggtggacgccgccatccg 156

                                                                       
Query: 100 cgacacgctcgacaaggtccttgtcctccgattcggccgcgcctccgacgccgcctgcct 159
           ||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||
Sbjct: 157 cgacacgctcgacaaggtcctcgtcctccgcttcggccgcgccgacgacgccgcctgcct 216

                                                                       
Query: 160 ccagctcgacgacgtcctcgcaaaatcttcttgggacatatccaaatttgcaacggtagc 219
           ||| ||||||||| ||||||| |||||||||||||||||||| |  ||||| ||||||||
Sbjct: 217 ccacctcgacgacatcctcgctaaatcttcttgggacatatcaaggtttgcgacggtagc 276

                                                                       
Query: 220 attggttgacatggattctgaggagattcaagtgtatgttgactattttgatatcacgtt 279
           |||||| || ||||||||||||||||| ||||| ||  |||||||||| |||||||| ||
Sbjct: 277 attggtcgatatggattctgaggagatgcaagtctacattgactatttcgatatcacttt 336

                                                                       
Query: 280 ggtcccagcaaccannnnnnncttcaatgctcatcacatgaaaatggattcagggacacc 339
           ||| ||||| ||||       ||||||||| || |||||||| ||||| |||||||||||
Sbjct: 337 ggttccagctaccatttttttcttcaatgcccaacacatgaagatggactcagggacacc 396

                                                                       
Query: 340 tgatcacacaaaatggataggctctttcagcagcaagcaagacttcattgatgtagttga 399
           |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 397 tgatcacacaaaatggattggctctttcagcagcaagcaagatttcattgatgtagttga 456

                                                                       
Query: 400 ggcagtattcaggggcgcgatgaaaggcaaactgatagtgtcttgcccacttccaccaga 459
           |||| |||| ||||| ||||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 457 ggcaatatttaggggtgcgatgaaaggtaaactgattgtttcttgcccacttccaccaga 516

                                               
Query: 460 gaggatacccagattccaactccttttcaaggatgt 495
           ||||||||||| |||||| |||||||||||||||||
Sbjct: 517 gaggatacccaaattccagctccttttcaaggatgt 552



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>dbj|AK067692.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118F01, full
           insert sequence
          Length = 917

 Score =  553 bits (279), Expect = e-154
 Identities = 410/456 (89%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatggggtcggtggtgctgccgacgctgcggcggaagcgggaggtcgacgccgccatccg 99
           ||||||||||| | |||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 98  gatggggtcggcgctgctgccgacgctgcggcggaagccggaggtggacgccgccatccg 157

                                                                       
Query: 100 cgacacgctcgacaaggtccttgtcctccgattcggccgcgcctccgacgccgcctgcct 159
           ||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||
Sbjct: 158 cgacacgctcgacaaggtcctcgtcctccgcttcggccgcgccgacgacgccgcctgcct 217

                                                                       
Query: 160 ccagctcgacgacgtcctcgcaaaatcttcttgggacatatccaaatttgcaacggtagc 219
           ||| ||||||||| ||||||| |||||||||||||||||||| |  ||||| ||||||||
Sbjct: 218 ccacctcgacgacatcctcgctaaatcttcttgggacatatcaaggtttgcgacggtagc 277

                                                                       
Query: 220 attggttgacatggattctgaggagattcaagtgtatgttgactattttgatatcacgtt 279
           |||||| || ||||||||||||||||| ||||| ||  |||||||||| |||||||| ||
Sbjct: 278 attggtcgatatggattctgaggagatgcaagtctacattgactatttcgatatcacttt 337

                                                                       
Query: 280 ggtcccagcaaccannnnnnncttcaatgctcatcacatgaaaatggattcagggacacc 339
           ||| ||||| ||||       ||||||||| || |||||||| ||||| |||||||||||
Sbjct: 338 ggttccagctaccatttttttcttcaatgcccaacacatgaagatggactcagggacacc 397

                                                                       
Query: 340 tgatcacacaaaatggataggctctttcagcagcaagcaagacttcattgatgtagttga 399
           |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 398 tgatcacacaaaatggattggctctttcagcagcaagcaagatttcattgatgtagttga 457

                                                                       
Query: 400 ggcagtattcaggggcgcgatgaaaggcaaactgatagtgtcttgcccacttccaccaga 459
           |||| |||| ||||| ||||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 458 ggcaatatttaggggtgcgatgaaaggtaaactgattgtttcttgcccacttccaccaga 517

                                               
Query: 460 gaggatacccagattccaactccttttcaaggatgt 495
           ||||||||||| |||||| |||||||||||||||||
Sbjct: 518 gaggatacccaaattccagctccttttcaaggatgt 553



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>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0045P14, complete sequence
          Length = 121894

 Score =  192 bits (97), Expect = 1e-45
 Identities = 124/133 (93%)
 Strand = Plus / Minus

                                                                         
Query: 40    gatggggtcggtggtgctgccgacgctgcggcggaagcgggaggtcgacgccgccatccg 99
             ||||||||||| | |||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 70393 gatggggtcggcgctgctgccgacgctgcggcggaagccggaggtggacgccgccatccg 70334

                                                                         
Query: 100   cgacacgctcgacaaggtccttgtcctccgattcggccgcgcctccgacgccgcctgcct 159
             ||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||
Sbjct: 70333 cgacacgctcgacaaggtcctcgtcctccgcttcggccgcgccgacgacgccgcctgcct 70274

                          
Query: 160   ccagctcgacgac 172
             ||| |||||||||
Sbjct: 70273 ccacctcgacgac 70261



 Score =  129 bits (65), Expect = 2e-26
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                         
Query: 399   aggcagtattcaggggcgcgatgaaaggcaaactgatagtgtcttgcccacttccaccag 458
             ||||| |||| ||||| ||||||||||| |||||||| || |||||||||||||||||||
Sbjct: 67468 aggcaatatttaggggtgcgatgaaaggtaaactgattgtttcttgcccacttccaccag 67409

                                                  
Query: 459   agaggatacccagattccaactccttttcaaggatgt 495
             |||||||||||| |||||| |||||||||||||||||
Sbjct: 67408 agaggatacccaaattccagctccttttcaaggatgt 67372



 Score =  123 bits (62), Expect = 1e-24
 Identities = 133/159 (83%)
 Strand = Plus / Minus

                                                                         
Query: 176   ctcgcaaaatcttcttgggacatatccaaatttgcaacggtagcattggttgacatggat 235
             ||||| |||||||||||||||||||| |  ||||| |||||||||||||| || ||||||
Sbjct: 69670 ctcgctaaatcttcttgggacatatcaaggtttgcgacggtagcattggtcgatatggat 69611

                                                                         
Query: 236   tctgaggagattcaagtgtatgttgactattttgatatcacgttggtcccagcaaccann 295
             ||||||||||| ||||| ||  |||||||||| |||||||| ||||| ||||| ||||  
Sbjct: 69610 tctgaggagatgcaagtctacattgactatttcgatatcactttggttccagctaccatt 69551

                                                    
Query: 296   nnnnncttcaatgctcatcacatgaaaatggattcaggg 334
                  ||||||||| || |||||||| ||||| ||||||
Sbjct: 69550 tttttcttcaatgcccaacacatgaagatggactcaggg 69512



 Score =  121 bits (61), Expect = 5e-24
 Identities = 67/69 (97%)
 Strand = Plus / Minus

                                                                         
Query: 333   ggacacctgatcacacaaaatggataggctctttcagcagcaagcaagacttcattgatg 392
             ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 68561 ggacacctgatcacacaaaatggattggctctttcagcagcaagcaagatttcattgatg 68502

                      
Query: 393   tagttgagg 401
             |||||||||
Sbjct: 68501 tagttgagg 68493



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score =  192 bits (97), Expect = 1e-45
 Identities = 124/133 (93%)
 Strand = Plus / Minus

                                                                            
Query: 40       gatggggtcggtggtgctgccgacgctgcggcggaagcgggaggtcgacgccgccatccg 99
                ||||||||||| | |||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 10880873 gatggggtcggcgctgctgccgacgctgcggcggaagccggaggtggacgccgccatccg 10880814

                                                                            
Query: 100      cgacacgctcgacaaggtccttgtcctccgattcggccgcgcctccgacgccgcctgcct 159
                ||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||
Sbjct: 10880813 cgacacgctcgacaaggtcctcgtcctccgcttcggccgcgccgacgacgccgcctgcct 10880754

                             
Query: 160      ccagctcgacgac 172
                ||| |||||||||
Sbjct: 10880753 ccacctcgacgac 10880741



 Score =  129 bits (65), Expect = 2e-26
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                            
Query: 399      aggcagtattcaggggcgcgatgaaaggcaaactgatagtgtcttgcccacttccaccag 458
                ||||| |||| ||||| ||||||||||| |||||||| || |||||||||||||||||||
Sbjct: 10877948 aggcaatatttaggggtgcgatgaaaggtaaactgattgtttcttgcccacttccaccag 10877889

                                                     
Query: 459      agaggatacccagattccaactccttttcaaggatgt 495
                |||||||||||| |||||| |||||||||||||||||
Sbjct: 10877888 agaggatacccaaattccagctccttttcaaggatgt 10877852



 Score =  123 bits (62), Expect = 1e-24
 Identities = 133/159 (83%)
 Strand = Plus / Minus

                                                                            
Query: 176      ctcgcaaaatcttcttgggacatatccaaatttgcaacggtagcattggttgacatggat 235
                ||||| |||||||||||||||||||| |  ||||| |||||||||||||| || ||||||
Sbjct: 10880150 ctcgctaaatcttcttgggacatatcaaggtttgcgacggtagcattggtcgatatggat 10880091

                                                                            
Query: 236      tctgaggagattcaagtgtatgttgactattttgatatcacgttggtcccagcaaccann 295
                ||||||||||| ||||| ||  |||||||||| |||||||| ||||| ||||| ||||  
Sbjct: 10880090 tctgaggagatgcaagtctacattgactatttcgatatcactttggttccagctaccatt 10880031

                                                       
Query: 296      nnnnncttcaatgctcatcacatgaaaatggattcaggg 334
                     ||||||||| || |||||||| ||||| ||||||
Sbjct: 10880030 tttttcttcaatgcccaacacatgaagatggactcaggg 10879992



 Score =  121 bits (61), Expect = 5e-24
 Identities = 67/69 (97%)
 Strand = Plus / Minus

                                                                            
Query: 333      ggacacctgatcacacaaaatggataggctctttcagcagcaagcaagacttcattgatg 392
                ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 10879041 ggacacctgatcacacaaaatggattggctctttcagcagcaagcaagatttcattgatg 10878982

                         
Query: 393      tagttgagg 401
                |||||||||
Sbjct: 10878981 tagttgagg 10878973



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>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score =  151 bits (76), Expect = 5e-33
 Identities = 132/153 (86%)
 Strand = Plus / Minus

                                                                          
Query: 182    aaatcttcttgggacatatccaaatttgcaacggtagcattggttgacatggattctgag 241
              ||||||||||||||||||||||| ||||| | ||||||||| ||||||||||| ||||||
Sbjct: 256200 aaatcttcttgggacatatccaagtttgctatggtagcattagttgacatggactctgag 256141

                                                                          
Query: 242    gagattcaagtgtatgttgactattttgatatcacgttggtcccagcaaccannnnnnnc 301
              ||||||||||| ||  ||||||| ||||| ||||| ||||| ||||||||||       |
Sbjct: 256140 gagattcaagtttacattgactactttgacatcactttggttccagcaaccattttcttc 256081

                                               
Query: 302    ttcaatgctcatcacatgaaaatggattcaggg 334
              |||||||| ||||||||||| ||||||||||||
Sbjct: 256080 ttcaatgcccatcacatgaagatggattcaggg 256048



 Score =  125 bits (63), Expect = 3e-25
 Identities = 90/99 (90%)
 Strand = Plus / Minus

                                                                          
Query: 399    aggcagtattcaggggcgcgatgaaaggcaaactgatagtgtcttgcccacttccaccag 458
              ||||| ||||||| || |||||||||||||||||||||||||||||||| ||||| || |
Sbjct: 254112 aggcaatattcagaggtgcgatgaaaggcaaactgatagtgtcttgcccccttcctcctg 254053

                                                     
Query: 459    agaggatacccagattccaactccttttcaaggatgtct 497
              |||||||||| |||||||| || ||||||||||||||||
Sbjct: 254052 agaggataccaagattccagcttcttttcaaggatgtct 254014



 Score =  109 bits (55), Expect = 2e-20
 Identities = 106/123 (86%)
 Strand = Plus / Minus

                                                                          
Query: 40     gatggggtcggtggtgctgccgacgctgcggcggaagcgggaggtcgacgccgccatccg 99
              ||||||||| ||  ||||||| || ||||||| |||| | ||||||||||||||||||||
Sbjct: 257593 gatggggtcagttttgctgccaactctgcggctgaagagtgaggtcgacgccgccatccg 257534

                                                                          
Query: 100    cgacacgctcgacaaggtccttgtcctccgattcggccgcgcctccgacgccgcctgcct 159
              |||||| ||||| |||||||| || |||||||| || |||||| |||||||| | |||||
Sbjct: 257533 cgacaccctcgataaggtcctcgttctccgatttggtcgcgccaccgacgccacttgcct 257474

                 
Query: 160    cca 162
              |||
Sbjct: 257473 cca 257471



 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                          
Query: 333    ggacacctgatcacacaaaatggataggctctttcagcagcaagcaagacttcattgatg 392
              |||||||||| ||||||||||||||||| ||||| |||||||| || ||||| || ||||
Sbjct: 255268 ggacacctgaccacacaaaatggataggttcttttagcagcaaacaggactttatcgatg 255209

                       
Query: 393    tagttgagg 401
              |||||||||
Sbjct: 255208 tagttgagg 255200



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>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence
          Length = 323584

 Score =  143 bits (72), Expect = 1e-30
 Identities = 131/153 (85%)
 Strand = Plus / Minus

                                                                          
Query: 182    aaatcttcttgggacatatccaaatttgcaacggtagcattggttgacatggattctgag 241
              ||||||||||||||||||||||| ||||| | ||||||||| ||||||||||| ||||||
Sbjct: 260421 aaatcttcttgggacatatccaagtttgctatggtagcattagttgacatggactctgag 260362

                                                                          
Query: 242    gagattcaagtgtatgttgactattttgatatcacgttggtcccagcaaccannnnnnnc 301
              ||||||||||| ||  ||||||| ||||| || || ||||| ||||||||||       |
Sbjct: 260361 gagattcaagtttacattgactactttgacattactttggttccagcaaccattttcttc 260302

                                               
Query: 302    ttcaatgctcatcacatgaaaatggattcaggg 334
              |||||||| ||||||||||| ||||||||||||
Sbjct: 260301 ttcaatgcccatcacatgaagatggattcaggg 260269



 Score =  125 bits (63), Expect = 3e-25
 Identities = 90/99 (90%)
 Strand = Plus / Minus

                                                                          
Query: 399    aggcagtattcaggggcgcgatgaaaggcaaactgatagtgtcttgcccacttccaccag 458
              ||||| ||||||| || |||||||||||||||||||||||||||||||| ||||| || |
Sbjct: 256387 aggcaatattcagaggtgcgatgaaaggcaaactgatagtgtcttgcccccttcctcctg 256328

                                                     
Query: 459    agaggatacccagattccaactccttttcaaggatgtct 497
              |||||||||| |||||||| || ||||||||||||||||
Sbjct: 256327 agaggataccaagattccagcttcttttcaaggatgtct 256289



 Score =  117 bits (59), Expect = 7e-23
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                          
Query: 40     gatggggtcggtggtgctgccgacgctgcggcggaagcgggaggtcgacgccgccatccg 99
              ||||||||| ||  ||||||| |||||||||| |||| | ||||||||||||||||||||
Sbjct: 261812 gatggggtcagttttgctgccaacgctgcggctgaagagtgaggtcgacgccgccatccg 261753

                                                                          
Query: 100    cgacacgctcgacaaggtccttgtcctccgattcggccgcgcctccgacgccgcctgcct 159
              |||||| ||||| |||||||| || |||||||| || |||||| |||||||| | |||||
Sbjct: 261752 cgacaccctcgataaggtcctcgttctccgatttggtcgcgccaccgacgccacttgcct 261693

                 
Query: 160    cca 162
              |||
Sbjct: 261692 cca 261690



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                          
Query: 333    ggacacctgatcacacaaaatggataggctctttcagcagcaagcaagacttcattgatg 392
              |||||||||| ||||||||||||||||| ||||| |||||||| |||||||| || ||||
Sbjct: 259528 ggacacctgaccacacaaaatggataggttcttttagcagcaaacaagactttatcgatg 259469

                       
Query: 393    tagttgagg 401
              |||||||||
Sbjct: 259468 tagttgagg 259460



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>emb|CT987188.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 832

 Score =  133 bits (67), Expect = 1e-27
 Identities = 97/107 (90%)
 Strand = Plus / Plus

                                                                       
Query: 73  gaagcgggaggtcgacgccgccatccgcgacacgctcgacaaggtccttgtcctccgatt 132
           |||||||||||| ||  |||||||||| |||||  ||||||||||||| |||||||| ||
Sbjct: 174 gaagcgggaggtggattccgccatccgggacaccatcgacaaggtcctcgtcctccgctt 233

                                                          
Query: 133 cggccgcgcctccgacgccgcctgcctccagctcgacgacgtcctcg 179
           |||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 234 cggccgcgcctccgacgccgtctgcctccagctcgacgacatcctcg 280



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>ref|NM_113385.2| Arabidopsis thaliana catalytic/ electron transporter (AT3G24730)
           mRNA, complete cds
          Length = 626

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                       
Query: 203 aaatttgcaacggtagcattggttgacatggattctgaggagattcaagtgtatgttgac 262
           |||||||| | |||||| ||||||||  | ||||| |||||  |||||||||||||  | 
Sbjct: 184 aaatttgctaaggtagctttggttgatgttgattcagaggatgttcaagtgtatgtgaag 243

                             
Query: 263 tattttgatatcacgttg 280
           ||||||||||||||||||
Sbjct: 244 tattttgatatcacgttg 261



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>gb|BT011726.1| Arabidopsis thaliana At3g24730 gene, complete cds
          Length = 480

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                       
Query: 203 aaatttgcaacggtagcattggttgacatggattctgaggagattcaagtgtatgttgac 262
           |||||||| | |||||| ||||||||  | ||||| |||||  |||||||||||||  | 
Sbjct: 184 aaatttgctaaggtagctttggttgatgttgattcagaggatgttcaagtgtatgtgaag 243

                             
Query: 263 tattttgatatcacgttg 280
           ||||||||||||||||||
Sbjct: 244 tattttgatatcacgttg 261



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>dbj|AK176149.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL22-97-D22
          Length = 617

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                       
Query: 203 aaatttgcaacggtagcattggttgacatggattctgaggagattcaagtgtatgttgac 262
           |||||||| | |||||| ||||||||  | ||||| |||||  |||||||||||||  | 
Sbjct: 166 aaatttgctaaggtagctttggttgatgttgattcagaggatgttcaagtgtatgtgaag 225

                             
Query: 263 tattttgatatcacgttg 280
           ||||||||||||||||||
Sbjct: 226 tattttgatatcacgttg 243



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>dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8
          Length = 78529

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                        
Query: 203  aaatttgcaacggtagcattggttgacatggattctgaggagattcaagtgtatgttgac 262
            |||||||| | |||||| ||||||||  | ||||| |||||  |||||||||||||  | 
Sbjct: 2279 aaatttgctaaggtagctttggttgatgttgattcagaggatgttcaagtgtatgtgaag 2220

                              
Query: 263  tattttgatatcacgttg 280
            ||||||||||||||||||
Sbjct: 2219 tattttgatatcacgttg 2202



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>emb|BX825801.1|CNS0A68X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL63ZF03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 598

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                       
Query: 203 aaatttgcaacggtagcattggttgacatggattctgaggagattcaagtgtatgttgac 262
           |||||||| | |||||| ||||||||  | ||||| |||||  |||||||||||||  | 
Sbjct: 156 aaatttgctaaggtagctttggttgatgttgattcagaggatgttcaagtgtatgtgaag 215

                             
Query: 263 tattttgatatcacgttg 280
           ||||||||||||||||||
Sbjct: 216 tattttgatatcacgttg 233



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>gb|AC119741.3| Homo sapiens 3 BAC RP11-570O24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 191857

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 695   tctgtttctctatgttatagcat 717
             |||||||||||||||||||||||
Sbjct: 12743 tctgtttctctatgttatagcat 12765



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>gb|AC117464.4| Homo sapiens 3 BAC RP11-412N9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 154728

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 695    tctgtttctctatgttatagcat 717
              |||||||||||||||||||||||
Sbjct: 140844 tctgtttctctatgttatagcat 140866



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>emb|BX936384.22| Zebrafish DNA sequence from clone CH211-76M11 in linkage group 20
              Contains seven novel genes and two CpG islands, complete
              sequence
          Length = 194634

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 663    aagagttagcatttgcactggtt 685
              |||||||||||||||||||||||
Sbjct: 158490 aagagttagcatttgcactggtt 158468



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>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 44.1 bits (22), Expect = 0.85
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 51     tggtgctgccgacgctgcggcg 72
              ||||||||||||||||||||||
Sbjct: 222978 tggtgctgccgacgctgcggcg 222957



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>ref|XM_001226053.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_10787)
            mRNA, complete cds
          Length = 1971

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 83   gtcgacgccgccatccgcgac 103
            |||||||||||||||||||||
Sbjct: 1093 gtcgacgccgccatccgcgac 1113



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>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone
             OSJNBb0061I18, complete sequence
          Length = 143163

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 537   ttttagataatggaagagttt 557
             |||||||||||||||||||||
Sbjct: 52304 ttttagataatggaagagttt 52284



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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 440     tcttgcccacttccaccagag 460
               |||||||||||||||||||||
Sbjct: 6614048 tcttgcccacttccaccagag 6614028



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>gb|AC087332.6| Mus Musculus Chromosome 2 RP23-58L18, complete sequence
          Length = 143720

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   tggattctgaggagattcaag 251
             |||||||||||||||||||||
Sbjct: 86769 tggattctgaggagattcaag 86789



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 703     tctatgttatagcataataca 723
               |||||||||||||||||||||
Sbjct: 4123268 tctatgttatagcataataca 4123288



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 537      ttttagataatggaagagttt 557
                |||||||||||||||||||||
Sbjct: 12451871 ttttagataatggaagagttt 12451891



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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 88      cgccgccatccgcgacacgct 108
               |||||||||||||||||||||
Sbjct: 2056111 cgccgccatccgcgacacgct 2056091



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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 88      cgccgccatccgcgacacgct 108
               |||||||||||||||||||||
Sbjct: 1044240 cgccgccatccgcgacacgct 1044220



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>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 123469

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 703   tctatgttatagcataataca 723
             |||||||||||||||||||||
Sbjct: 65664 tctatgttatagcataataca 65684



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>emb|AL845470.6| Mouse DNA sequence from clone RP23-204G5 on chromosome 2, complete
             sequence
          Length = 90648

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 231   tggattctgaggagattcaag 251
             |||||||||||||||||||||
Sbjct: 22298 tggattctgaggagattcaag 22278



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>dbj|AB007404.1| Oryza sativa gene for alanine aminotransferase, complete cds
          Length = 9289

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 537  ttttagataatggaagagttt 557
            |||||||||||||||||||||
Sbjct: 2150 ttttagataatggaagagttt 2170


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 160,919,779
Number of extensions: 9023610
Number of successful extensions: 201981
Number of sequences better than 10.0: 27
Number of HSP's gapped: 201977
Number of HSP's successfully gapped: 39
Length of query: 892
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 869
Effective length of database: 18,503,978,556
Effective search space: 16079957365164
Effective search space used: 16079957365164
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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