ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf101d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK062915:Os08g0416800 92 3e-19

>AK062915:Os08g0416800 |
          Length = 81
 Score = 91.7 bits (226), Expect = 3e-19
 Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
 Frame = +3

Query: 96  MVMMGQLGRLVDGLRSKMRXXXXXXXXXXXXXX----YEQMGKTDSMRVEIKSRQAQKLI 263
           MV+MGQLGR +DG++SK+R                  Y++M KT+SMRVEI+SRQAQKLI
Sbjct: 1   MVVMGQLGRFMDGIKSKLRGGGGRKTGRKKEAAAMMTYDKMDKTESMRVEIRSRQAQKLI 60

Query: 264 AKNLVAADSIGRRSRNKRFFLAF 332
           AKNLVAADSIGR  RNKRFFLAF
Sbjct: 61  AKNLVAADSIGR--RNKRFFLAF 81


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,465,745
Number of extensions: 224267
Number of successful extensions: 468
Number of sequences better than 10.0: 1
Number of HSP's gapped: 465
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 99
Effective length of database: 11,595,960
Effective search space: 1148000040
Effective search space used: 1148000040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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