| Clone Name | FLbaf104e02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001068001.1| Oryza sativa (japonica cultivar-group) Os08g0292600 (Os08g0292600) mRNA, complete cds Length = 1387 Score = 502 bits (253), Expect = e-138 Identities = 598/713 (83%) Strand = Plus / Plus Query: 518 attgacaccaccatcaccgaccgcatattcatggactttagcatctgtccaagcttcttt 577 ||||| ||||||||||| || || || ||||||||||| || |||| || |||| |||| Sbjct: 431 attgataccaccatcacagatcggatcttcatggacttcagtgtctgccctagctacttt 490 Query: 578 agcaatgaccgcacgttaggagctgaacttgcttcatgccctgattctgagcctcttgga 637 || ||||||||| ||||||||||| |||||| |||| ||||||||||| |||||||| Sbjct: 491 cgctctgaccgcactttaggagctgagcttgctacatgtcctgattctgaacctcttggt 550 Query: 638 cgtgtagtctttggtctctatggtcggctactcccgatcactactaccaacttcaaaact 697 |||||| | |||||| | |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 551 cgtgtaatttttggtttgtatggtcgactcctccccctcactactgccaacttcaaagct 610 Query: 698 acctgcactgcttcagcatatcgaggcacacttgtccacaaggtgcttcaaggtcagttc 757 | |||||| || | ||||| || || ||||||||||||||| | ||||| || |||||| Sbjct: 611 gcttgcacttctgctgcataccggggaacacttgtccacaagctccttcagggccagttc 670 Query: 758 tttgctgctggccgacaaggttctcggcgtgataagggtgtggtccaacctccctcgaag 817 || | ||||||||| |||||| |||||||||| | ||| | ||||||||||||| | Sbjct: 671 ttcgttgctggccgccaaggtcctcggcgtgacaggggcgaggtccaacctcccaccgga 730 Query: 818 cttgtgagaaatgttgagacagttgatcctaaagcgtatcaactaagacatgcaaggcct 877 |||||||| |||| |||||| |||| |||||||| | | |||||| |||||||||||| Sbjct: 731 cttgtgaggaatgctgagactattgaccctaaagcatttgaactaaagcatgcaaggcct 790 Query: 878 ggcaccctatccttgtgtcttgagcagaatgacgatgacgatagcatcaagctcagtccc 937 |||||||| || ||||| |||| ||||| || || || ||| ||||||||||| ||| Sbjct: 791 ggcaccctctcattgtgccttggacagaacgatgacgatgatgacatcaagctcaatcct 850 Query: 938 aattatcacaatgttgaattcctggtgaccacagggccagggccctgtccagatcttgat 997 ||||||||||||||||||||| |||| ||||| || ||||||||||| ||||| |||||| Sbjct: 851 aattatcacaatgttgaattcttggttaccactggaccagggccctgcccagagcttgat 910 Query: 998 ggccagaacattgtctttggaactgtattagaaggaatggacgttatcaccagcattgca 1057 || |||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||| Sbjct: 911 ggacagaacattgtctttggaactgtattggaaggaatgaatgttataaccagcattgca 970 Query: 1058 accatccctacctataaaccaggtgaaaggatccaattattcaacgattttgcacaactg 1117 || || |||||||||||||||| ||||||||||| || ||||| |||||||| || || Sbjct: 971 actattcctacctataaaccagctgaaaggatccgcttcttcaatgattttgcccagttg 1030 Query: 1118 attggtgatgaaagagctcaatctgctagagccatgtgggatcgcccacagaaaaccgtg 1177 ||||||||||||||||||||| ||||| |||| ||||||||||||| | ||||| || Sbjct: 1031 attggtgatgaaagagctcaaactgctcgagcgttgtgggatcgcccgctaaaaactgtt 1090 Query: 1178 tatatcagcggttgcggggagctgaaaatgaccaagccatctctttcccctcc 1230 |||||||| | |||||| ||||| ||| ||||||| ||||| ||||||||||| Sbjct: 1091 tatatcagtgattgcggagagctaaaagtgaccaaaccatcactttcccctcc 1143 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 290 acttcctccatggctgaccacgtttctcttagcagtctccaccaccaccccaaca 344 ||||| ||||||||| ||| ||||| || ||||| ||||||||||||||||||| Sbjct: 203 acttcttccatggcttaccctgtttccctgagcagcctccaccaccaccccaaca 257
>dbj|AK070751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064N17, full insert sequence Length = 2052 Score = 502 bits (253), Expect = e-138 Identities = 598/713 (83%) Strand = Plus / Plus Query: 518 attgacaccaccatcaccgaccgcatattcatggactttagcatctgtccaagcttcttt 577 ||||| ||||||||||| || || || ||||||||||| || |||| || |||| |||| Sbjct: 1165 attgataccaccatcacagatcggatcttcatggacttcagtgtctgccctagctacttt 1224 Query: 578 agcaatgaccgcacgttaggagctgaacttgcttcatgccctgattctgagcctcttgga 637 || ||||||||| ||||||||||| |||||| |||| ||||||||||| |||||||| Sbjct: 1225 cgctctgaccgcactttaggagctgagcttgctacatgtcctgattctgaacctcttggt 1284 Query: 638 cgtgtagtctttggtctctatggtcggctactcccgatcactactaccaacttcaaaact 697 |||||| | |||||| | |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 1285 cgtgtaatttttggtttgtatggtcgactcctccccctcactactgccaacttcaaagct 1344 Query: 698 acctgcactgcttcagcatatcgaggcacacttgtccacaaggtgcttcaaggtcagttc 757 | |||||| || | ||||| || || ||||||||||||||| | ||||| || |||||| Sbjct: 1345 gcttgcacttctgctgcataccggggaacacttgtccacaagctccttcagggccagttc 1404 Query: 758 tttgctgctggccgacaaggttctcggcgtgataagggtgtggtccaacctccctcgaag 817 || | ||||||||| |||||| |||||||||| | ||| | ||||||||||||| | Sbjct: 1405 ttcgttgctggccgccaaggtcctcggcgtgacaggggcgaggtccaacctcccaccgga 1464 Query: 818 cttgtgagaaatgttgagacagttgatcctaaagcgtatcaactaagacatgcaaggcct 877 |||||||| |||| |||||| |||| |||||||| | | |||||| |||||||||||| Sbjct: 1465 cttgtgaggaatgctgagactattgaccctaaagcatttgaactaaagcatgcaaggcct 1524 Query: 878 ggcaccctatccttgtgtcttgagcagaatgacgatgacgatagcatcaagctcagtccc 937 |||||||| || ||||| |||| ||||| || || || ||| ||||||||||| ||| Sbjct: 1525 ggcaccctctcattgtgccttggacagaacgatgacgatgatgacatcaagctcaatcct 1584 Query: 938 aattatcacaatgttgaattcctggtgaccacagggccagggccctgtccagatcttgat 997 ||||||||||||||||||||| |||| ||||| || ||||||||||| ||||| |||||| Sbjct: 1585 aattatcacaatgttgaattcttggttaccactggaccagggccctgcccagagcttgat 1644 Query: 998 ggccagaacattgtctttggaactgtattagaaggaatggacgttatcaccagcattgca 1057 || |||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||| Sbjct: 1645 ggacagaacattgtctttggaactgtattggaaggaatgaatgttataaccagcattgca 1704 Query: 1058 accatccctacctataaaccaggtgaaaggatccaattattcaacgattttgcacaactg 1117 || || |||||||||||||||| ||||||||||| || ||||| |||||||| || || Sbjct: 1705 actattcctacctataaaccagctgaaaggatccgcttcttcaatgattttgcccagttg 1764 Query: 1118 attggtgatgaaagagctcaatctgctagagccatgtgggatcgcccacagaaaaccgtg 1177 ||||||||||||||||||||| ||||| |||| ||||||||||||| | ||||| || Sbjct: 1765 attggtgatgaaagagctcaaactgctcgagcgttgtgggatcgcccgctaaaaactgtt 1824 Query: 1178 tatatcagcggttgcggggagctgaaaatgaccaagccatctctttcccctcc 1230 |||||||| | |||||| ||||| ||| ||||||| ||||| ||||||||||| Sbjct: 1825 tatatcagtgattgcggagagctaaaagtgaccaaaccatcactttcccctcc 1877 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 290 acttcctccatggctgaccacgtttctcttagcagtctccaccaccaccccaaca 344 ||||| ||||||||| ||| ||||| || ||||| ||||||||||||||||||| Sbjct: 937 acttcttccatggcttaccctgtttccctgagcagcctccaccaccaccccaaca 991
>dbj|AK069211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011I02, full insert sequence Length = 1388 Score = 502 bits (253), Expect = e-138 Identities = 598/713 (83%) Strand = Plus / Plus Query: 518 attgacaccaccatcaccgaccgcatattcatggactttagcatctgtccaagcttcttt 577 ||||| ||||||||||| || || || ||||||||||| || |||| || |||| |||| Sbjct: 432 attgataccaccatcacagatcggatcttcatggacttcagtgtctgccctagctacttt 491 Query: 578 agcaatgaccgcacgttaggagctgaacttgcttcatgccctgattctgagcctcttgga 637 || ||||||||| ||||||||||| |||||| |||| ||||||||||| |||||||| Sbjct: 492 cgctctgaccgcactttaggagctgagcttgctacatgtcctgattctgaacctcttggt 551 Query: 638 cgtgtagtctttggtctctatggtcggctactcccgatcactactaccaacttcaaaact 697 |||||| | |||||| | |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 552 cgtgtaatttttggtttgtatggtcgactcctccccctcactactgccaacttcaaagct 611 Query: 698 acctgcactgcttcagcatatcgaggcacacttgtccacaaggtgcttcaaggtcagttc 757 | |||||| || | ||||| || || ||||||||||||||| | ||||| || |||||| Sbjct: 612 gcttgcacttctgctgcataccggggaacacttgtccacaagctccttcagggccagttc 671 Query: 758 tttgctgctggccgacaaggttctcggcgtgataagggtgtggtccaacctccctcgaag 817 || | ||||||||| |||||| |||||||||| | ||| | ||||||||||||| | Sbjct: 672 ttcgttgctggccgccaaggtcctcggcgtgacaggggcgaggtccaacctcccaccgga 731 Query: 818 cttgtgagaaatgttgagacagttgatcctaaagcgtatcaactaagacatgcaaggcct 877 |||||||| |||| |||||| |||| |||||||| | | |||||| |||||||||||| Sbjct: 732 cttgtgaggaatgctgagactattgaccctaaagcatttgaactaaagcatgcaaggcct 791 Query: 878 ggcaccctatccttgtgtcttgagcagaatgacgatgacgatagcatcaagctcagtccc 937 |||||||| || ||||| |||| ||||| || || || ||| ||||||||||| ||| Sbjct: 792 ggcaccctctcattgtgccttggacagaacgatgacgatgatgacatcaagctcaatcct 851 Query: 938 aattatcacaatgttgaattcctggtgaccacagggccagggccctgtccagatcttgat 997 ||||||||||||||||||||| |||| ||||| || ||||||||||| ||||| |||||| Sbjct: 852 aattatcacaatgttgaattcttggttaccactggaccagggccctgcccagagcttgat 911 Query: 998 ggccagaacattgtctttggaactgtattagaaggaatggacgttatcaccagcattgca 1057 || |||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||| Sbjct: 912 ggacagaacattgtctttggaactgtattggaaggaatgaatgttataaccagcattgca 971 Query: 1058 accatccctacctataaaccaggtgaaaggatccaattattcaacgattttgcacaactg 1117 || || |||||||||||||||| ||||||||||| || ||||| |||||||| || || Sbjct: 972 actattcctacctataaaccagctgaaaggatccgcttcttcaatgattttgcccagttg 1031 Query: 1118 attggtgatgaaagagctcaatctgctagagccatgtgggatcgcccacagaaaaccgtg 1177 ||||||||||||||||||||| ||||| |||| ||||||||||||| | ||||| || Sbjct: 1032 attggtgatgaaagagctcaaactgctcgagcgttgtgggatcgcccgctaaaaactgtt 1091 Query: 1178 tatatcagcggttgcggggagctgaaaatgaccaagccatctctttcccctcc 1230 |||||||| | |||||| ||||| ||| ||||||| ||||| ||||||||||| Sbjct: 1092 tatatcagtgattgcggagagctaaaagtgaccaaaccatcactttcccctcc 1144 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 290 acttcctccatggctgaccacgtttctcttagcagtctccaccaccaccccaaca 344 ||||| ||||||||| ||| ||||| || ||||| ||||||||||||||||||| Sbjct: 204 acttcttccatggcttaccctgtttccctgagcagcctccaccaccaccccaaca 258
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 339 bits (171), Expect = 2e-89 Identities = 429/515 (83%) Strand = Plus / Plus Query: 518 attgacaccaccatcaccgaccgcatattcatggactttagcatctgtccaagcttcttt 577 ||||| ||||||||||| || || || ||||||||||| || |||| || |||| |||| Sbjct: 11722192 attgataccaccatcacagatcggatcttcatggacttcagtgtctgccctagctacttt 11722251 Query: 578 agcaatgaccgcacgttaggagctgaacttgcttcatgccctgattctgagcctcttgga 637 || ||||||||| ||||||||||| |||||| |||| ||||||||||| |||||||| Sbjct: 11722252 cgctctgaccgcactttaggagctgagcttgctacatgtcctgattctgaacctcttggt 11722311 Query: 638 cgtgtagtctttggtctctatggtcggctactcccgatcactactaccaacttcaaaact 697 |||||| | |||||| | |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 11722312 cgtgtaatttttggtttgtatggtcgactcctccccctcactactgccaacttcaaagct 11722371 Query: 698 acctgcactgcttcagcatatcgaggcacacttgtccacaaggtgcttcaaggtcagttc 757 | |||||| || | ||||| || || ||||||||||||||| | ||||| || |||||| Sbjct: 11722372 gcttgcacttctgctgcataccggggaacacttgtccacaagctccttcagggccagttc 11722431 Query: 758 tttgctgctggccgacaaggttctcggcgtgataagggtgtggtccaacctccctcgaag 817 || | ||||||||| |||||| |||||||||| | ||| | ||||||||||||| | Sbjct: 11722432 ttcgttgctggccgccaaggtcctcggcgtgacaggggcgaggtccaacctcccaccgga 11722491 Query: 818 cttgtgagaaatgttgagacagttgatcctaaagcgtatcaactaagacatgcaaggcct 877 |||||||| |||| |||||| |||| |||||||| | | |||||| |||||||||||| Sbjct: 11722492 cttgtgaggaatgctgagactattgaccctaaagcatttgaactaaagcatgcaaggcct 11722551 Query: 878 ggcaccctatccttgtgtcttgagcagaatgacgatgacgatagcatcaagctcagtccc 937 |||||||| || ||||| |||| ||||| || || || ||| ||||||||||| ||| Sbjct: 11722552 ggcaccctctcattgtgccttggacagaacgatgacgatgatgacatcaagctcaatcct 11722611 Query: 938 aattatcacaatgttgaattcctggtgaccacagggccagggccctgtccagatcttgat 997 ||||||||||||||||||||| |||| ||||| || ||||||||||| ||||| |||||| Sbjct: 11722612 aattatcacaatgttgaattcttggttaccactggaccagggccctgcccagagcttgat 11722671 Query: 998 ggccagaacattgtctttggaactgtattagaagg 1032 || |||||||||||||||||||||||||| ||||| Sbjct: 11722672 ggacagaacattgtctttggaactgtattggaagg 11722706 Score = 168 bits (85), Expect = 3e-38 Identities = 172/201 (85%) Strand = Plus / Plus Query: 1030 aggaatggacgttatcaccagcattgcaaccatccctacctataaaccaggtgaaaggat 1089 ||||||| | ||||| |||||||||||||| || |||||||||||||||| ||||||||| Sbjct: 11725420 aggaatgaatgttataaccagcattgcaactattcctacctataaaccagctgaaaggat 11725479 Query: 1090 ccaattattcaacgattttgcacaactgattggtgatgaaagagctcaatctgctagagc 1149 || || ||||| |||||||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 11725480 ccgcttcttcaatgattttgcccagttgattggtgatgaaagagctcaaactgctcgagc 11725539 Query: 1150 catgtgggatcgcccacagaaaaccgtgtatatcagcggttgcggggagctgaaaatgac 1209 ||||||||||||| | ||||| || |||||||| | |||||| ||||| ||| |||| Sbjct: 11725540 gttgtgggatcgcccgctaaaaactgtttatatcagtgattgcggagagctaaaagtgac 11725599 Query: 1210 caagccatctctttcccctcc 1230 ||| ||||| ||||||||||| Sbjct: 11725600 caaaccatcactttcccctcc 11725620 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 290 acttcctccatggctgaccacgtttctcttagcagtctccaccaccaccccaaca 344 ||||| ||||||||| ||| ||||| || ||||| ||||||||||||||||||| Sbjct: 11721964 acttcttccatggcttaccctgtttccctgagcagcctccaccaccaccccaaca 11722018 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 catggccgccaccgccaccgcc 43 |||||||||||||||||||||| Sbjct: 11252286 catggccgccaccgccaccgcc 11252265 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 5471401 gccgccaccgccaccgccacg 5471381
>dbj|AP005390.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0075O18 Length = 125411 Score = 339 bits (171), Expect = 2e-89 Identities = 429/515 (83%) Strand = Plus / Plus Query: 518 attgacaccaccatcaccgaccgcatattcatggactttagcatctgtccaagcttcttt 577 ||||| ||||||||||| || || || ||||||||||| || |||| || |||| |||| Sbjct: 51892 attgataccaccatcacagatcggatcttcatggacttcagtgtctgccctagctacttt 51951 Query: 578 agcaatgaccgcacgttaggagctgaacttgcttcatgccctgattctgagcctcttgga 637 || ||||||||| ||||||||||| |||||| |||| ||||||||||| |||||||| Sbjct: 51952 cgctctgaccgcactttaggagctgagcttgctacatgtcctgattctgaacctcttggt 52011 Query: 638 cgtgtagtctttggtctctatggtcggctactcccgatcactactaccaacttcaaaact 697 |||||| | |||||| | |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 52012 cgtgtaatttttggtttgtatggtcgactcctccccctcactactgccaacttcaaagct 52071 Query: 698 acctgcactgcttcagcatatcgaggcacacttgtccacaaggtgcttcaaggtcagttc 757 | |||||| || | ||||| || || ||||||||||||||| | ||||| || |||||| Sbjct: 52072 gcttgcacttctgctgcataccggggaacacttgtccacaagctccttcagggccagttc 52131 Query: 758 tttgctgctggccgacaaggttctcggcgtgataagggtgtggtccaacctccctcgaag 817 || | ||||||||| |||||| |||||||||| | ||| | ||||||||||||| | Sbjct: 52132 ttcgttgctggccgccaaggtcctcggcgtgacaggggcgaggtccaacctcccaccgga 52191 Query: 818 cttgtgagaaatgttgagacagttgatcctaaagcgtatcaactaagacatgcaaggcct 877 |||||||| |||| |||||| |||| |||||||| | | |||||| |||||||||||| Sbjct: 52192 cttgtgaggaatgctgagactattgaccctaaagcatttgaactaaagcatgcaaggcct 52251 Query: 878 ggcaccctatccttgtgtcttgagcagaatgacgatgacgatagcatcaagctcagtccc 937 |||||||| || ||||| |||| ||||| || || || ||| ||||||||||| ||| Sbjct: 52252 ggcaccctctcattgtgccttggacagaacgatgacgatgatgacatcaagctcaatcct 52311 Query: 938 aattatcacaatgttgaattcctggtgaccacagggccagggccctgtccagatcttgat 997 ||||||||||||||||||||| |||| ||||| || ||||||||||| ||||| |||||| Sbjct: 52312 aattatcacaatgttgaattcttggttaccactggaccagggccctgcccagagcttgat 52371 Query: 998 ggccagaacattgtctttggaactgtattagaagg 1032 || |||||||||||||||||||||||||| ||||| Sbjct: 52372 ggacagaacattgtctttggaactgtattggaagg 52406 Score = 168 bits (85), Expect = 3e-38 Identities = 172/201 (85%) Strand = Plus / Plus Query: 1030 aggaatggacgttatcaccagcattgcaaccatccctacctataaaccaggtgaaaggat 1089 ||||||| | ||||| |||||||||||||| || |||||||||||||||| ||||||||| Sbjct: 55120 aggaatgaatgttataaccagcattgcaactattcctacctataaaccagctgaaaggat 55179 Query: 1090 ccaattattcaacgattttgcacaactgattggtgatgaaagagctcaatctgctagagc 1149 || || ||||| |||||||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 55180 ccgcttcttcaatgattttgcccagttgattggtgatgaaagagctcaaactgctcgagc 55239 Query: 1150 catgtgggatcgcccacagaaaaccgtgtatatcagcggttgcggggagctgaaaatgac 1209 ||||||||||||| | ||||| || |||||||| | |||||| ||||| ||| |||| Sbjct: 55240 gttgtgggatcgcccgctaaaaactgtttatatcagtgattgcggagagctaaaagtgac 55299 Query: 1210 caagccatctctttcccctcc 1230 ||| ||||| ||||||||||| Sbjct: 55300 caaaccatcactttcccctcc 55320 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 290 acttcctccatggctgaccacgtttctcttagcagtctccaccaccaccccaaca 344 ||||| ||||||||| ||| ||||| || ||||| ||||||||||||||||||| Sbjct: 51664 acttcttccatggcttaccctgtttccctgagcagcctccaccaccaccccaaca 51718
>dbj|AP003918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_A03 Length = 168689 Score = 339 bits (171), Expect = 2e-89 Identities = 429/515 (83%) Strand = Plus / Plus Query: 518 attgacaccaccatcaccgaccgcatattcatggactttagcatctgtccaagcttcttt 577 ||||| ||||||||||| || || || ||||||||||| || |||| || |||| |||| Sbjct: 477 attgataccaccatcacagatcggatcttcatggacttcagtgtctgccctagctacttt 536 Query: 578 agcaatgaccgcacgttaggagctgaacttgcttcatgccctgattctgagcctcttgga 637 || ||||||||| ||||||||||| |||||| |||| ||||||||||| |||||||| Sbjct: 537 cgctctgaccgcactttaggagctgagcttgctacatgtcctgattctgaacctcttggt 596 Query: 638 cgtgtagtctttggtctctatggtcggctactcccgatcactactaccaacttcaaaact 697 |||||| | |||||| | |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 597 cgtgtaatttttggtttgtatggtcgactcctccccctcactactgccaacttcaaagct 656 Query: 698 acctgcactgcttcagcatatcgaggcacacttgtccacaaggtgcttcaaggtcagttc 757 | |||||| || | ||||| || || ||||||||||||||| | ||||| || |||||| Sbjct: 657 gcttgcacttctgctgcataccggggaacacttgtccacaagctccttcagggccagttc 716 Query: 758 tttgctgctggccgacaaggttctcggcgtgataagggtgtggtccaacctccctcgaag 817 || | ||||||||| |||||| |||||||||| | ||| | ||||||||||||| | Sbjct: 717 ttcgttgctggccgccaaggtcctcggcgtgacaggggcgaggtccaacctcccaccgga 776 Query: 818 cttgtgagaaatgttgagacagttgatcctaaagcgtatcaactaagacatgcaaggcct 877 |||||||| |||| |||||| |||| |||||||| | | |||||| |||||||||||| Sbjct: 777 cttgtgaggaatgctgagactattgaccctaaagcatttgaactaaagcatgcaaggcct 836 Query: 878 ggcaccctatccttgtgtcttgagcagaatgacgatgacgatagcatcaagctcagtccc 937 |||||||| || ||||| |||| ||||| || || || ||| ||||||||||| ||| Sbjct: 837 ggcaccctctcattgtgccttggacagaacgatgacgatgatgacatcaagctcaatcct 896 Query: 938 aattatcacaatgttgaattcctggtgaccacagggccagggccctgtccagatcttgat 997 ||||||||||||||||||||| |||| ||||| || ||||||||||| ||||| |||||| Sbjct: 897 aattatcacaatgttgaattcttggttaccactggaccagggccctgcccagagcttgat 956 Query: 998 ggccagaacattgtctttggaactgtattagaagg 1032 || |||||||||||||||||||||||||| ||||| Sbjct: 957 ggacagaacattgtctttggaactgtattggaagg 991 Score = 168 bits (85), Expect = 3e-38 Identities = 172/201 (85%) Strand = Plus / Plus Query: 1030 aggaatggacgttatcaccagcattgcaaccatccctacctataaaccaggtgaaaggat 1089 ||||||| | ||||| |||||||||||||| || |||||||||||||||| ||||||||| Sbjct: 3705 aggaatgaatgttataaccagcattgcaactattcctacctataaaccagctgaaaggat 3764 Query: 1090 ccaattattcaacgattttgcacaactgattggtgatgaaagagctcaatctgctagagc 1149 || || ||||| |||||||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 3765 ccgcttcttcaatgattttgcccagttgattggtgatgaaagagctcaaactgctcgagc 3824 Query: 1150 catgtgggatcgcccacagaaaaccgtgtatatcagcggttgcggggagctgaaaatgac 1209 ||||||||||||| | ||||| || |||||||| | |||||| ||||| ||| |||| Sbjct: 3825 gttgtgggatcgcccgctaaaaactgtttatatcagtgattgcggagagctaaaagtgac 3884 Query: 1210 caagccatctctttcccctcc 1230 ||| ||||| ||||||||||| Sbjct: 3885 caaaccatcactttcccctcc 3905 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 290 acttcctccatggctgaccacgtttctcttagcagtctccaccaccaccccaaca 344 ||||| ||||||||| ||| ||||| || ||||| ||||||||||||||||||| Sbjct: 249 acttcttccatggcttaccctgtttccctgagcagcctccaccaccaccccaaca 303
>dbj|AK121304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111F24, full insert sequence Length = 3305 Score = 339 bits (171), Expect = 2e-89 Identities = 429/515 (83%) Strand = Plus / Plus Query: 518 attgacaccaccatcaccgaccgcatattcatggactttagcatctgtccaagcttcttt 577 ||||| ||||||||||| || || || ||||||||||| || |||| || |||| |||| Sbjct: 1213 attgataccaccatcacagatcggatcttcatggacttcagtgtctgccctagctacttt 1272 Query: 578 agcaatgaccgcacgttaggagctgaacttgcttcatgccctgattctgagcctcttgga 637 || ||||||||| ||||||||||| |||||| |||| ||||||||||| |||||||| Sbjct: 1273 cgctctgaccgcactttaggagctgagcttgctacatgtcctgattctgaacctcttggt 1332 Query: 638 cgtgtagtctttggtctctatggtcggctactcccgatcactactaccaacttcaaaact 697 |||||| | |||||| | |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 1333 cgtgtaatttttggtttgtatggtcgactcctccccctcactactgccaacttcaaagct 1392 Query: 698 acctgcactgcttcagcatatcgaggcacacttgtccacaaggtgcttcaaggtcagttc 757 | |||||| || | ||||| || || ||||||||||||||| | ||||| || |||||| Sbjct: 1393 gcttgcacttctgctgcataccggggaacacttgtccacaagctccttcagggccagttc 1452 Query: 758 tttgctgctggccgacaaggttctcggcgtgataagggtgtggtccaacctccctcgaag 817 || | ||||||||| |||||| |||||||||| | ||| | ||||||||||||| | Sbjct: 1453 ttcgttgctggccgccaaggtcctcggcgtgacaggggcgaggtccaacctcccaccgga 1512 Query: 818 cttgtgagaaatgttgagacagttgatcctaaagcgtatcaactaagacatgcaaggcct 877 |||||||| |||| |||||| |||| |||||||| | | |||||| |||||||||||| Sbjct: 1513 cttgtgaggaatgctgagactattgaccctaaagcatttgaactaaagcatgcaaggcct 1572 Query: 878 ggcaccctatccttgtgtcttgagcagaatgacgatgacgatagcatcaagctcagtccc 937 |||||||| || ||||| |||| ||||| || || || ||| ||||||||||| ||| Sbjct: 1573 ggcaccctctcattgtgccttggacagaacgatgacgatgatgacatcaagctcaatcct 1632 Query: 938 aattatcacaatgttgaattcctggtgaccacagggccagggccctgtccagatcttgat 997 ||||||||||||||||||||| |||| ||||| || ||||||||||| ||||| |||||| Sbjct: 1633 aattatcacaatgttgaattcttggttaccactggaccagggccctgcccagagcttgat 1692 Query: 998 ggccagaacattgtctttggaactgtattagaagg 1032 || |||||||||||||||||||||||||| ||||| Sbjct: 1693 ggacagaacattgtctttggaactgtattggaagg 1727 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 290 acttcctccatggctgaccacgtttctcttagcagtctccaccaccaccccaaca 344 ||||| ||||||||| ||| ||||| || ||||| ||||||||||||||||||| Sbjct: 985 acttcttccatggcttaccctgtttccctgagcagcctccaccaccaccccaaca 1039
>gb|AY111645.1| Zea mays CL5994_1 mRNA sequence Length = 622 Score = 176 bits (89), Expect = 1e-40 Identities = 197/233 (84%) Strand = Plus / Plus Query: 1011 tctttggaactgtattagaaggaatggacgttatcaccagcattgcaaccatccctacct 1070 ||||||| |||||||| ||||||||||| || ||||||||||| |||||||| ||||||| Sbjct: 1 tctttgggactgtattggaaggaatggatgtcatcaccagcatcgcaaccatacctacct 60 Query: 1071 ataaaccaggtgaaaggatccaattattcaacgattttgcacaactgattggtgatgaaa 1130 | ||||||| ||||||||||| | ||||||| ||||| || |||||||||||| || Sbjct: 61 acaaaccagctgaaaggatccgcctcttcaacggctttgcgcagttgattggtgatggaa 120 Query: 1131 gagctcaatctgctagagccatgtgggatcgcccacagaaaaccgtgtatatcagcggtt 1190 | |||||| |||| | || |||||||| ||||| | || |||||||||||||||| | Sbjct: 121 gggctcaaactgcccgggctatgtgggaccgcccgcttaagaccgtgtatatcagcgact 180 Query: 1191 gcggggagctgaaaatgaccaagccatctctttcccctcctagcttgccatga 1243 |||||||||||| | | ||||| ||||||||||||||||| |||||||||||| Sbjct: 181 gcggggagctgacagtaaccaaaccatctctttcccctccaagcttgccatga 233
>emb|CT832097.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128P03, full insert sequence Length = 1021 Score = 48.1 bits (24), Expect = 0.084 Identities = 24/24 (100%) Strand = Plus / Plus Query: 23 atggccgccaccgccaccgccacg 46 |||||||||||||||||||||||| Sbjct: 607 atggccgccaccgccaccgccacg 630
>ref|NM_001051933.1| Oryza sativa (japonica cultivar-group) Os01g0949300 (Os01g0949300) mRNA, complete cds Length = 1005 Score = 48.1 bits (24), Expect = 0.084 Identities = 24/24 (100%) Strand = Plus / Plus Query: 23 atggccgccaccgccaccgccacg 46 |||||||||||||||||||||||| Sbjct: 599 atggccgccaccgccaccgccacg 622
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 48.1 bits (24), Expect = 0.084 Identities = 24/24 (100%) Strand = Plus / Plus Query: 23 atggccgccaccgccaccgccacg 46 |||||||||||||||||||||||| Sbjct: 41811356 atggccgccaccgccaccgccacg 41811379 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacgtccctagg 54 |||||||||||||||||||| ||||||| Sbjct: 9518753 gccgccaccgccaccgccaccgccctagg 9518781 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 19356102 gccgccaccgccaccgccacg 19356082
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 48.1 bits (24), Expect = 0.084 Identities = 24/24 (100%) Strand = Plus / Plus Query: 23 atggccgccaccgccaccgccacg 46 |||||||||||||||||||||||| Sbjct: 54732 atggccgccaccgccaccgccacg 54755
>dbj|AK072758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142M19, full insert sequence Length = 1006 Score = 48.1 bits (24), Expect = 0.084 Identities = 24/24 (100%) Strand = Plus / Plus Query: 23 atggccgccaccgccaccgccacg 46 |||||||||||||||||||||||| Sbjct: 600 atggccgccaccgccaccgccacg 623
>dbj|AK058802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-B01, full insert sequence Length = 901 Score = 48.1 bits (24), Expect = 0.084 Identities = 24/24 (100%) Strand = Plus / Plus Query: 23 atggccgccaccgccaccgccacg 46 |||||||||||||||||||||||| Sbjct: 616 atggccgccaccgccaccgccacg 639
>emb|CR855163.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0160I14, complete sequence Length = 73693 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 20 accatggccgccaccgccaccgc 42 ||||||||||||||||||||||| Sbjct: 22212 accatggccgccaccgccaccgc 22190
>ref|NM_001061809.1| Oryza sativa (japonica cultivar-group) Os05g0350500 (Os05g0350500) mRNA, complete cds Length = 1529 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ccgccaccgccaccgccacgtcc 49 ||||||||||||||||||||||| Sbjct: 90 ccgccaccgccaccgccacgtcc 112
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Minus Query: 19 caccatggccgccaccgccaccgccac 45 ||||||| ||||||||||||||||||| Sbjct: 3967951 caccatgaccgccaccgccaccgccac 3967925
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ccgccaccgccaccgccacgtcc 49 ||||||||||||||||||||||| Sbjct: 57181 ccgccaccgccaccgccacgtcc 57203
>gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, complete sequence Length = 254081 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 tctccaccaccaccccaacagcc 347 ||||||||||||||||||||||| Sbjct: 251784 tctccaccaccaccccaacagcc 251762
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 24 tggccgccaccgccaccgccacg 46 ||||||||||||||||||||||| Sbjct: 69626 tggccgccaccgccaccgccacg 69604
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 20 accatggccgccaccgccaccgc 42 ||||||||||||||||||||||| Sbjct: 23487 accatggccgccaccgccaccgc 23465
>gb|AC100850.2| Homo sapiens chromosome 8, clone RP11-235P11, complete sequence Length = 72757 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1215 catctctttcccctcctagcttgccat 1241 |||||||||||||||||| |||||||| Sbjct: 65888 catctctttcccctcctaccttgccat 65914
>gb|AC008005.8| Homo sapiens chromosome 8, clone RP11-44L18, complete sequence Length = 142235 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1215 catctctttcccctcctagcttgccat 1241 |||||||||||||||||| |||||||| Sbjct: 7362 catctctttcccctcctaccttgccat 7336
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ccgccaccgccaccgccacgtcc 49 ||||||||||||||||||||||| Sbjct: 16416744 ccgccaccgccaccgccacgtcc 16416766 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 |||| |||||||||||||||||||| Sbjct: 2857341 ccattgccgccaccgccaccgccac 2857317
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 20 accatggccgccaccgccaccgc 42 ||||||||||||||||||||||| Sbjct: 21373737 accatggccgccaccgccaccgc 21373715
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 24 tggccgccaccgccaccgccacg 46 ||||||||||||||||||||||| Sbjct: 31834916 tggccgccaccgccaccgccacg 31834894
>gb|AC010656.7|AC010656 Homo sapiens clone RP11-275E24, complete sequence Length = 139032 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1215 catctctttcccctcctagcttgccat 1241 |||||||||||||||||| |||||||| Sbjct: 18389 catctctttcccctcctaccttgccat 18415
>dbj|AK100394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E17, full insert sequence Length = 2666 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 tggccgccaccgccaccgccacg 46 ||||||||||||||||||||||| Sbjct: 72 tggccgccaccgccaccgccacg 94
>dbj|AK102897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112P14, full insert sequence Length = 1530 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ccgccaccgccaccgccacgtcc 49 ||||||||||||||||||||||| Sbjct: 91 ccgccaccgccaccgccacgtcc 113
>dbj|AK061712.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-G08, full insert sequence Length = 1427 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ccgccaccgccaccgccacgtcc 49 ||||||||||||||||||||||| Sbjct: 93 ccgccaccgccaccgccacgtcc 115
>gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosome 7, complete sequence Length = 144527 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 325 tctccaccaccaccccaacagcc 347 ||||||||||||||||||||||| Sbjct: 54688 tctccaccaccaccccaacagcc 54710
>gb|AF020787.1|AF020787 Oryza sativa DNA-binding protein GBP16 (Rgbp16) mRNA, complete cds Length = 1422 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ccgccaccgccaccgccacgtcc 49 ||||||||||||||||||||||| Sbjct: 38 ccgccaccgccaccgccacgtcc 60
>gb|M27659.1|SCMESPAB S.haematobium eggshell protein gene ORFs Length = 1038 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Minus Query: 19 caccatggccgccaccgccaccgccac 45 |||||| |||||||||||||||||||| Sbjct: 693 caccatagccgccaccgccaccgccac 667
>gb|M27658.1|SCMESPAA S.haematobium eggshell protein gene ORFs Length = 962 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Minus Query: 19 caccatggccgccaccgccaccgccac 45 |||||| |||||||||||||||||||| Sbjct: 617 caccatagccgccaccgccaccgccac 591
>ref|NM_001067983.1| Oryza sativa (japonica cultivar-group) Os08g0285100 (Os08g0285100) mRNA, complete cds Length = 1500 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 catggccgccaccgccaccgcc 43 |||||||||||||||||||||| Sbjct: 582 catggccgccaccgccaccgcc 603
>ref|NM_001055024.1| Oryza sativa (japonica cultivar-group) Os02g0814100 (Os02g0814100) mRNA, complete cds Length = 1719 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Minus Query: 6 ctcctcccaccgtcaccatggccgccaccgccaccgcc 43 |||| ||||||| | ||| ||||||||||||||||||| Sbjct: 103 ctccgcccaccgcccccacggccgccaccgccaccgcc 66
>ref|XM_986835.1| PREDICTED: Mus musculus hypothetical protein LOC671411 (LOC671411), mRNA Length = 1011 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ggccgccaccgccaccgccacg 46 |||||||||||||||||||||| Sbjct: 726 ggccgccaccgccaccgccacg 705
>ref|XM_539524.2| PREDICTED: Canis familiaris similar to Dedicator of cytokinesis protein 4 (LOC482407), mRNA Length = 5976 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 tggccgccaccgccaccgccac 45 |||||||||||||||||||||| Sbjct: 5848 tggccgccaccgccaccgccac 5827
>gb|AC134441.4| Mus musculus BAC clone RP24-544J6 from chromosome 5, complete sequence Length = 177565 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 ggccgccaccgccaccgccacg 46 |||||||||||||||||||||| Sbjct: 81767 ggccgccaccgccaccgccacg 81788
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 6 ctcctcccaccgtcaccatggccgccaccgccaccgcc 43 |||| ||||||| | ||| ||||||||||||||||||| Sbjct: 34906813 ctccgcccaccgcccccacggccgccaccgccaccgcc 34906850 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 |||||||||||||||||| |||||| Sbjct: 4426537 ccatggccgccaccgccatcgccac 4426513
>emb|AL137015.9| Human DNA sequence from clone RP13-272N16 on chromosome Xq21.2-21.33 Contains a CpG island, complete sequence Length = 99527 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 327 tccaccaccaccccaacagcca 348 |||||||||||||||||||||| Sbjct: 12630 tccaccaccaccccaacagcca 12609
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 6 ctcctcccaccgtcaccatggccgccaccgccaccgcc 43 |||| ||||||| | ||| ||||||||||||||||||| Sbjct: 128408 ctccgcccaccgcccccacggccgccaccgccaccgcc 128445
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 6 ctcctcccaccgtcaccatggccgccaccgccaccgcc 43 |||| ||||||| | ||| ||||||||||||||||||| Sbjct: 66310 ctccgcccaccgcccccacggccgccaccgccaccgcc 66347
>dbj|AP005541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B05 Length = 149754 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 catggccgccaccgccaccgcc 43 |||||||||||||||||||||| Sbjct: 87304 catggccgccaccgccaccgcc 87283
>gb|AC027121.5|AC027121 Homo sapiens chromosome 3 clone RP11-25C11 map 3p, complete sequence Length = 162771 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 ccccaacagccaatcttcctgt 358 |||||||||||||||||||||| Sbjct: 162556 ccccaacagccaatcttcctgt 162577
>dbj|AB063393.1| Bacteriophage IN93 DNA, complete genome Length = 19603 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ggccgccaccgccaccgccacg 46 |||||||||||||||||||||| Sbjct: 9368 ggccgccaccgccaccgccacg 9347
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 tggccgccaccgccaccgccac 45 |||||||||||||||||||||| Sbjct: 1510040 tggccgccaccgccaccgccac 1510019
>gb|AC024171.5| Homo sapiens chromosome 3 clone RP11-794G3 map 3p, complete sequence Length = 208881 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 337 ccccaacagccaatcttcctgt 358 |||||||||||||||||||||| Sbjct: 101046 ccccaacagccaatcttcctgt 101025
>gb|AC069276.4| Homo sapiens chromosome 3 clone RP11-470E10 map 3p, complete sequence Length = 184058 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 337 ccccaacagccaatcttcctgt 358 |||||||||||||||||||||| Sbjct: 172021 ccccaacagccaatcttcctgt 172000
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 19 caccatggccgccaccgccaccgcc 43 |||||||||||| |||||||||||| Sbjct: 4573122 caccatggccgcgaccgccaccgcc 4573146
>gb|DQ244427.1| Zea mays clone 7477 mRNA sequence Length = 692 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 ccatggccgccaccgccaccgccac 45 ||||||||||| ||||||||||||| Sbjct: 12 ccatggccgccgccgccaccgccac 36
>gb|AC191754.2| Pan troglodytes BAC clone CH251-424E19 from chromosome 1, complete sequence Length = 186102 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 124963 gccgccaccgccaccgccacg 124943
>emb|AJ871131.1| Hordeum vulgare subsp. vulgare partial mRNA for respiratory burst oxidase homologue (rbohA gene) Length = 1819 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 273 gccgccaccgccaccgccacg 293
>emb|CT828034.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN078D06, full insert sequence Length = 1208 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 427 gccgccaccgccaccgccacg 447
>emb|CT833258.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA202E04, full insert sequence Length = 2429 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 ccatggccgccaccgccaccgccac 45 |||||||||||||||||| |||||| Sbjct: 1146 ccatggccgccaccgccatcgccac 1170
>ref|NM_001073039.1| Oryza sativa (japonica cultivar-group) Os12g0256300 (Os12g0256300) mRNA, complete cds Length = 2961 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 77 gccgccaccgccaccgccacg 97
>ref|NM_001067717.1| Oryza sativa (japonica cultivar-group) Os08g0193900 (Os08g0193900) mRNA, complete cds Length = 1517 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 70 gccgccaccgccaccgccacg 90
>ref|NM_001063793.1| Oryza sativa (japonica cultivar-group) Os06g0239000 (Os06g0239000) mRNA, partial cds Length = 1277 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 202 gccgccaccgccaccgccacg 222
>ref|NM_001052620.1| Oryza sativa (japonica cultivar-group) Os02g0179600 (Os02g0179600) mRNA, complete cds Length = 2172 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 ccatggccgccaccgccaccgccac 45 |||||||||||||||||| |||||| Sbjct: 81 ccatggccgccaccgccatcgccac 105
>ref|NM_001049253.1| Oryza sativa (japonica cultivar-group) Os01g0274300 (Os01g0274300) mRNA, partial cds Length = 606 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacgtccctagg 54 |||||||||||||||||||| ||||||| Sbjct: 56 gccgccaccgccaccgccaccgccctagg 84
>ref|XM_524659.2| PREDICTED: Pan troglodytes similar to SFPQ protein (LOC469274), mRNA Length = 1976 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 249 gccgccaccgccaccgccacg 229
>ref|NM_024439.3| Mus musculus histocompatibility 47 (H47), mRNA Length = 1208 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 ||||||| ||||||||||||||||| Sbjct: 69 ccatggcggccaccgccaccgccac 45
>ref|XM_001076118.1| PREDICTED: Rattus norvegicus similar to leucine rich repeat neuronal 6C (LOC686868), mRNA Length = 2780 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacgtccc 50 |||||||||||||||||||| |||| Sbjct: 27 gccgccaccgccaccgccacctccc 3
>ref|XM_001075512.1| PREDICTED: Rattus norvegicus similar to leucine rich repeat neuronal 6C (LOC690755), mRNA Length = 2780 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacgtccc 50 |||||||||||||||||||| |||| Sbjct: 27 gccgccaccgccaccgccacctccc 3
>ref|XM_001058078.1| PREDICTED: Rattus norvegicus hypothetical protein LOC680631 (LOC680631), mRNA Length = 624 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 327 gccgccaccgccaccgccacg 347
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 3680962 gccgccaccgccaccgccacg 3680982
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgtcaccatggccgccaccg 35 ||||||||||||||||||||| Sbjct: 1296111 ccgtcaccatggccgccaccg 1296131
>gb|BT018002.1| Zea mays clone EL01N0526H03.c mRNA sequence Length = 765 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 356 gccgccaccgccaccgccacg 336
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 |||| |||||||||||||||||||| Sbjct: 51952 ccattgccgccaccgccaccgccac 51928
>ref|XM_706087.1| Candida albicans SC5314 hypothetical protein (CaO19.8703), mRNA Length = 2451 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 accatggccgccaccgccaccgcca 44 |||||| |||||||||||||||||| Sbjct: 1747 accatgaccgccaccgccaccgcca 1771
>ref|XM_706066.1| Candida albicans SC5314 hypothetical protein (CaO19.1106), mRNA Length = 2451 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 accatggccgccaccgccaccgcca 44 |||||| |||||||||||||||||| Sbjct: 1747 accatgaccgccaccgccaccgcca 1771
>gb|AC024201.1| Caenorhabditis elegans cosmid Y71F9B, complete sequence Length = 83297 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ctccaccaccaccccaacagc 346 ||||||||||||||||||||| Sbjct: 64008 ctccaccaccaccccaacagc 63988
>gb|AC127595.3| Mus musculus BAC clone RP23-49I18 from chromosome 7, complete sequence Length = 239586 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 ccatggccgccaccgccaccgccac 45 ||||||| ||||||||||||||||| Sbjct: 229901 ccatggcggccaccgccaccgccac 229925
>ref|XM_844364.1| PREDICTED: Canis familiaris similar to a disintegrin and metalloprotease domain 6 (LOC490896), partial mRNA Length = 2717 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1048 cagcattgcaaccatccctacctataaac 1076 |||||||||||| ||||||||||||||| Sbjct: 1013 cagcattgcaacagtccctacctataaac 1041
>gb|AC124695.4| Mus musculus BAC clone RP24-172H24 from chromosome 7, complete sequence Length = 147990 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 ccatggccgccaccgccaccgccac 45 ||||||| ||||||||||||||||| Sbjct: 44030 ccatggcggccaccgccaccgccac 44054
>gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome 6, complete sequence Length = 193830 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 59281 gccgccaccgccaccgccacg 59261
>ref|NM_006162.3| Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 2, mRNA Length = 4762 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ccgcagccgcagggccaagtg 159 ||||||||||||||||||||| Sbjct: 511 ccgcagccgcagggccaagtg 491
>ref|NM_172388.1| Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 4, mRNA Length = 3671 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ccgcagccgcagggccaagtg 159 ||||||||||||||||||||| Sbjct: 511 ccgcagccgcagggccaagtg 491
>ref|NM_172390.1| Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 1, mRNA Length = 3140 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ccgcagccgcagggccaagtg 159 ||||||||||||||||||||| Sbjct: 511 ccgcagccgcagggccaagtg 491
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggccgccaccgccaccgccac 45 ||||||||||||||||||||| Sbjct: 715633 ggccgccaccgccaccgccac 715613
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 |||||||||||||| |||||||||| Sbjct: 354719 ccatggccgccacccccaccgccac 354695
>gb|AF482466.1| Desulfotomaculum nigrificans dissimilatory sulfite reductase alpha subunit (dsrA) and dissimilatory sulfite reductase beta subunit (dsrB) genes, partial cds Length = 1781 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 943 tcacaatgttgaattcctggt 963 ||||||||||||||||||||| Sbjct: 1337 tcacaatgttgaattcctggt 1357
>gb|AC092709.2| Homo sapiens chromosome 8, clone RP11-509P12, complete sequence Length = 178904 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1253 tatatatgcctttctttttgtgtaa 1277 ||||| ||||||||||||||||||| Sbjct: 168176 tatatgtgcctttctttttgtgtaa 168200
>ref|NM_170837.2| Caenorhabditis elegans Suppressor of Pal-1 family member (sop-3) (sop-3) mRNA, complete cds Length = 4595 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 ctccaccaccaccccaacagc 346 ||||||||||||||||||||| Sbjct: 2543 ctccaccaccaccccaacagc 2563
>ref|XM_748863.1| Aspergillus fumigatus Af293 GTP-binding protein Gtp1 (Afu5g06770) partial mRNA Length = 1089 Score = 42.1 bits (21), Expect = 5.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 172 tgtgccgccaccgtccgccgccgccggtg 200 ||||||||||||| ||||||||||||||| Sbjct: 147 tgtgccgccaccg-ccgccgccgccggtg 120
>dbj|AK005204.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500011E07 product:MINOR HISTOCOMPATIBILITY ANTIGEN, full insert sequence Length = 1058 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 ||||||| ||||||||||||||||| Sbjct: 52 ccatggcggccaccgccaccgccac 28
>gb|AC087368.7| Homo sapiens chromosome 8, clone RP11-711G22, complete sequence Length = 185315 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1253 tatatatgcctttctttttgtgtaa 1277 ||||| ||||||||||||||||||| Sbjct: 75204 tatatgtgcctttctttttgtgtaa 75228
>gb|AC036176.8| Homo sapiens chromosome 18, clone RP11-635N19, complete sequence Length = 173252 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggccgccaccgccaccgccac 45 ||||||||||||||||||||| Sbjct: 161394 ggccgccaccgccaccgccac 161374
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 8800699 gccgccaccgccaccgccacg 8800719 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 cgtcaccatggccgccaccgc 36 ||||||||||||||||||||| Sbjct: 22516471 cgtcaccatggccgccaccgc 22516451
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggccgccaccgccaccgccac 45 ||||||||||||||||||||| Sbjct: 22359151 ggccgccaccgccaccgccac 22359131
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 ccatggccgccaccgccaccgccac 45 ||||||||||| ||||||||||||| Sbjct: 4156951 ccatggccgcctccgccaccgccac 4156975 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 |||||||| |||||||||||||||| Sbjct: 25794906 ccatggcctccaccgccaccgccac 25794882
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 7232767 gccgccaccgccaccgccacg 7232787 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ggccgccaccgccaccgccac 45 ||||||||||||||||||||| Sbjct: 28804090 ggccgccaccgccaccgccac 28804110
>gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331I23, complete sequence Length = 198695 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 135497 gccgccaccgccaccgccacg 135517
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggccgccaccgccaccgccac 45 ||||||||||||||||||||| Sbjct: 11174 ggccgccaccgccaccgccac 11154
>gb|U80919.1|HSU80919 Homo sapiens transcription factor (NF-ATc/D) mRNA, complete cds Length = 3499 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ccgcagccgcagggccaagtg 159 ||||||||||||||||||||| Sbjct: 339 ccgcagccgcagggccaagtg 319
>gb|U80917.1|HSU80917 Homo sapiens transcription factor (NF-ATc/B) mRNA, complete cds Length = 4678 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ccgcagccgcagggccaagtg 159 ||||||||||||||||||||| Sbjct: 427 ccgcagccgcagggccaagtg 407
>gb|AC090649.4| Genomic sequence for Mus musculus, clone RP23-361O12, complete sequence Length = 211611 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 203868 gccgccaccgccaccgccacg 203848
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 ccatggccgccaccgccaccgccac 45 |||| |||||||||||||||||||| Sbjct: 9947 ccattgccgccaccgccaccgccac 9971
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 84107 gccgccaccgccaccgccacg 84087
>emb|X12564.1|ZMGRP Maize ABA-inducible gene for glycine-rich protein ( ABA = abscisic acid) Length = 1114 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 612 gccgccaccgccaccgccacg 592
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 5.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 28 cgccaccgccaccgccacgtccctaggcctcgc 60 ||||||||||||||||||| ||| |||||||| Sbjct: 4095415 cgccaccgccaccgccacgcacctcggcctcgc 4095383
>gb|AY015581.1| Desulfotomaculum nigrificans dissimilatory sulfite reductase subunit B (dsrB) gene, partial cds Length = 567 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 943 tcacaatgttgaattcctggt 963 ||||||||||||||||||||| Sbjct: 144 tcacaatgttgaattcctggt 164
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 ccgtccgccgccgccggtgat 202 ||||||||||||||||||||| Sbjct: 136430 ccgtccgccgccgccggtgat 136450
>gb|BC096566.1| Mus musculus histocompatibility 47, mRNA (cDNA clone IMAGE:1349285) Length = 610 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 ||||||| ||||||||||||||||| Sbjct: 48 ccatggcggccaccgccaccgccac 24
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacgtccctagg 54 |||||||||||||||||||| ||||||| Sbjct: 52182 gccgccaccgccaccgccaccgccctagg 52210
>gb|AF308860.1|AF308860 Caenorhabditis elegans SOP-3 mRNA, complete cds Length = 4544 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 ctccaccaccaccccaacagc 346 ||||||||||||||||||||| Sbjct: 2543 ctccaccaccaccccaacagc 2563
>emb|X55693.1|LEEXTEN13 Tomato mRNA for a glycine-rich protein (clone w10-1) Length = 402 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 gccaccgccaccgccacgtcc 49 ||||||||||||||||||||| Sbjct: 351 gccaccgccaccgccacgtcc 331
>gb|AC009267.15|AC009267 Homo sapiens chromosome 18, clone RP11-495C15, complete sequence Length = 188923 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ggccgccaccgccaccgccac 45 ||||||||||||||||||||| Sbjct: 81061 ggccgccaccgccaccgccac 81081
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056O06 Length = 151038 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 141212 gccgccaccgccaccgccacg 141192
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ggccgccaccgccaccgccac 45 ||||||||||||||||||||| Sbjct: 111865 ggccgccaccgccaccgccac 111885
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 110178 gccgccaccgccaccgccacg 110198
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 67771 gccgccaccgccaccgccacg 67791
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 ccatggccgccaccgccaccgccac 45 ||||||||||| ||||||||||||| Sbjct: 40573 ccatggccgcctccgccaccgccac 40597
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 |||||||||||||||||| |||||| Sbjct: 110101 ccatggccgccaccgccatcgccac 110077
>gb|BC112243.1| Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1, transcript variant 1, mRNA (cDNA clone MGC:138448 IMAGE:8327711), complete cds Length = 2280 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ccgcagccgcagggccaagtg 159 ||||||||||||||||||||| Sbjct: 152 ccgcagccgcagggccaagtg 132
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 |||||||| |||||||||||||||| Sbjct: 112068 ccatggcctccaccgccaccgccac 112044
>gb|BC104753.1| Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1, mRNA (cDNA clone MGC:132413 IMAGE:8143756), complete cds Length = 2280 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ccgcagccgcagggccaagtg 159 ||||||||||||||||||||| Sbjct: 152 ccgcagccgcagggccaagtg 132
>dbj|AK110418.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-H08, full insert sequence Length = 2172 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 ccatggccgccaccgccaccgccac 45 |||||||||||||||||| |||||| Sbjct: 81 ccatggccgccaccgccatcgccac 105
>dbj|AK107917.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-G12, full insert sequence Length = 606 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacgtccctagg 54 |||||||||||||||||||| ||||||| Sbjct: 56 gccgccaccgccaccgccaccgccctagg 84
>dbj|AK107386.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C07, full insert sequence Length = 1517 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 70 gccgccaccgccaccgccacg 90
>gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, complete sequence Length = 180016 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 ccgcagccgcagggccaagtg 159 ||||||||||||||||||||| Sbjct: 19391 ccgcagccgcagggccaagtg 19411
>dbj|AK099579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039D24, full insert sequence Length = 2315 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 74 gccgccaccgccaccgccacg 94
>dbj|AK073908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075C23, full insert sequence Length = 2962 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 78 gccgccaccgccaccgccacg 98
>dbj|AK071932.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086D06, full insert sequence Length = 1279 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 202 gccgccaccgccaccgccacg 222
>dbj|AK063947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E12, full insert sequence Length = 1601 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 |||||||| |||||||||||||||| Sbjct: 535 ccatggcctccaccgccaccgccac 511
>gb|AC024854.1|AC024854 Caenorhabditis elegans clone Y71F9B, complete sequence Length = 83297 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ctccaccaccaccccaacagc 346 ||||||||||||||||||||| Sbjct: 64008 ctccaccaccaccccaacagc 63988
>emb|X55694.1|LEEXTEN14 Tomato extensin mRNA (clone w10-1 L) Length = 402 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 gccaccgccaccgccacgtcc 49 ||||||||||||||||||||| Sbjct: 52 gccaccgccaccgccacgtcc 72
>emb|X55692.1|LEEXTEN12 Tomato extensin mRNA (clone w1-8 L) Length = 619 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 gccaccgccaccgccacgtcc 49 ||||||||||||||||||||| Sbjct: 223 gccaccgccaccgccacgtcc 243
>emb|X55691.1|LEEXTEN11 Tomato mRNA for a glycine-rich protein (clone w1-8) Length = 619 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 gccaccgccaccgccacgtcc 49 ||||||||||||||||||||| Sbjct: 397 gccaccgccaccgccacgtcc 377
>emb|X55690.1|LEEXTEN10 Tomato mRNA for a glycine-rich protein (clone uE-7) Length = 385 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 gccaccgccaccgccacgtcc 49 ||||||||||||||||||||| Sbjct: 127 gccaccgccaccgccacgtcc 107
>emb|X55689.1|LEEXTEN9 Tomato mRNA for a glycine-rich protein (clone wN) Length = 586 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 gccaccgccaccgccacgtcc 49 ||||||||||||||||||||| Sbjct: 328 gccaccgccaccgccacgtcc 308
>emb|X55688.1|LEEXTEN8 Tomato mRNA for a glycine-rich protein (clone wM) Length = 693 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 gccaccgccaccgccacgtcc 49 ||||||||||||||||||||| Sbjct: 436 gccaccgccaccgccacgtcc 416
>gb|BC011091.1| Mus musculus histocompatibility 47, mRNA (cDNA clone MGC:18954 IMAGE:3983625), complete cds Length = 1219 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ccatggccgccaccgccaccgccac 45 ||||||| ||||||||||||||||| Sbjct: 59 ccatggcggccaccgccaccgccac 35
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 19 caccatggccgccaccgccaccgcc 43 |||||||||||| |||||||||||| Sbjct: 4665063 caccatggccgcgaccgccaccgcc 4665039
>gb|AC145914.4| Gallus gallus BAC clone CH261-78G10 from chromosome unknown, complete sequence Length = 228201 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1013 tttggaactgtattagaagga 1033 ||||||||||||||||||||| Sbjct: 176268 tttggaactgtattagaagga 176288
>emb|AL954871.5|CNS08CDA Oryza sativa chromosome 12, . BAC OSJNBb0085B24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131441 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 cgtcaccatggccgccaccgc 36 ||||||||||||||||||||| Sbjct: 19050 cgtcaccatggccgccaccgc 19030
>emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa0036A15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 195500 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 41470 gccgccaccgccaccgccacg 41450
>gb|U08015.1|HSU08015 Human NF-ATc mRNA, complete cds Length = 2743 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ccgcagccgcagggccaagtg 159 ||||||||||||||||||||| Sbjct: 297 ccgcagccgcagggccaagtg 277
>dbj|AB055131.1| Polygonum cuspidatum DNA, microsatellite at the locus Pcu3 Length = 123 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgccaccgccaccgccacg 46 ||||||||||||||||||||| Sbjct: 42 gccgccaccgccaccgccacg 62 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 225,665,534 Number of extensions: 12754883 Number of successful extensions: 280606 Number of sequences better than 10.0: 139 Number of HSP's gapped: 280591 Number of HSP's successfully gapped: 158 Length of query: 1364 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1341 Effective length of database: 18,503,978,556 Effective search space: 24813835243596 Effective search space used: 24813835243596 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)