>Q02921:NO93_SOYBN Early nodulin 93 - Glycine max (Soybean)|
          Length = 105
 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 40/75 (53%), Positives = 51/75 (68%)
 Frame = +2

Query: 134 EAVLLGGKNAAIAGTVVAVPTFVACRVLPWAKHNLNYTAQALIISTACVAGFFITADKTI 313
           E VL G K A +A    A+PT  + R+LPWA+ NLN+TAQALIISTA  A +FI ADKT+
Sbjct: 29  EGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTAQALIISTATAAAYFIVADKTV 88

Query: 314 LRNARQNTIGRIDES 358
           L  AR+N+  +   S
Sbjct: 89  LATARKNSFNQPSNS 103

>Q3UHC7:DAB2P_MOUSE Disabled homolog 2-interacting protein - Mus musculus (Mouse)|
          Length = 1189

 Score = 37.0 bits (84), Expect = 0.083
 Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
 Frame = +3

Query: 42   GKQVVAREEPWPPGTSYSDPPRRRNPAPPSERLSCWEGRTPPLLAPWLRFPRSS---LAA 212
            G+  V R+    P      PP    P PP+ R     GRTPP L   L++PR S   LA+
Sbjct: 901  GQPTVPRQNSAGPQRRIDQPPPPPPPPPPAPR-----GRTPPTLLSTLQYPRPSSGTLAS 955

Query: 213  SFLGLSII*TTPRKRSSYRQPVSPASSSPRIKP 311
            +    +   T  R++SS     S    SP +KP
Sbjct: 956  ASPDWAGPGTRLRQQSS-----SSKGDSPELKP 983

>Q5VWQ8:DAB2P_HUMAN Disabled homolog 2-interacting protein - Homo sapiens (Human)|
          Length = 1189

 Score = 36.6 bits (83), Expect = 0.11
 Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
 Frame = +3

Query: 42   GKQVVAREEPWPPGTSYSDPPRRRNPAPPSERLSCWEGRTPPLLAPWLRFPR------SS 203
            G+  V R+    P      PP    P PP+ R     GRTPP L   L++PR      +S
Sbjct: 901  GQPTVPRQNSAGPQRRIDQPPPPPPPPPPAPR-----GRTPPNLLSTLQYPRPSSGTLAS 955

Query: 204  LAASFLGLSII*TTPRKRSSYRQPVSPASSSPRIKP 311
             +  ++G S   T  R++SS     S    SP +KP
Sbjct: 956  ASPDWVGPS---TRLRQQSS-----SSKGDSPELKP 983

>Q6P730:DAB2P_RAT Disabled homolog 2-interacting protein - Rattus norvegicus (Rat)|
          Length = 996

 Score = 36.2 bits (82), Expect = 0.14
 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
 Frame = +3

Query: 42  GKQVVAREEPWPPGTSYSDPPRRRNPAPPSERLSCWEGRTPPLLAPWLRFPRSS---LAA 212
           G+  V R+    P      PP    P PP+ R     GRTPP +   L++PR S   LA+
Sbjct: 708 GQPTVPRQNSAGPQRRIDQPPPPPPPPPPAPR-----GRTPPTMLSTLQYPRPSSGTLAS 762

Query: 213 SFLGLSII*TTPRKRSSYRQPVSPASSSPRIKP 311
           +    +   T  R++SS     S    SP +KP
Sbjct: 763 ASPDWAGPGTRLRQQSS-----SSKGDSPELKP 790

>Q5UPS6:COLL5_MIMIV Collagen-like protein 5 - Mimivirus|
          Length = 812

 Score = 35.4 bits (80), Expect = 0.24
 Identities = 23/62 (37%), Positives = 26/62 (41%)
 Frame = -1

Query: 187 RNHGASNGGVLPSQQDSLSDGGAGFLLLGGSE*EVPGGHGSSLATTCFPCSLFRLNQAVG 8
           R +GAS GG    Q DS + GG G    GG+     GG G     T  P     L    G
Sbjct: 733 RTNGASTGGFPGGQTDSNTFGGGG----GGASGFAKGGDGEQEIPTTIPAQSGTLGSGGG 788

Query: 7   GP 2
           GP
Sbjct: 789 GP 790

>Q7Z2K8:GRIN1_HUMAN G protein-regulated inducer of neurite outgrowth 1 - Homo sapiens|
           (Human)
          Length = 1008

 Score = 34.3 bits (77), Expect = 0.54
 Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 18/129 (13%)
 Frame = +3

Query: 60  REEPWPPGTSYSDPP----RRRNPAPPSERLSCWEGRTPPLL--APWLRFPRSSLAASFL 221
           +  P PP  +    P    R R+P+   E  SC +G    L   +P    P+ S +   L
Sbjct: 51  KASPAPPRHTPDQSPGMESRHRSPSGAGEGASCSDGPRGSLACPSPTCFSPQESPSKETL 110

Query: 222 ---GLSII*TTPRKRSSYRQPVS-----PASSSPRIKPFCETQD----KTQSGGSTSRLD 365
              G SI  TT    S   +PVS     P SS  R   F E  D    K     S  + D
Sbjct: 111 EAHGASISGTTEATTSGKPEPVSSVKTEPKSSDDRNPMFLEKMDFKSSKQADSTSIGKED 170

Query: 366 PGLYRIAGP 392
           PG  R A P
Sbjct: 171 PGSSRKADP 179

>Q03164:HRX_HUMAN Zinc finger protein HRX - Homo sapiens (Human)|
          Length = 3969

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 22/64 (34%), Positives = 28/64 (43%)
 Frame = +3

Query: 84  TSYSDPPRRRNPAPPSERLSCWEGRTPPLLAPWLRFPRSSLAASFLGLSII*TTPRKRSS 263
           TS S PP    P PP +  S     T     PWL  P   LA+ FL  S      +++S 
Sbjct: 557 TSSSPPPPLLTPPPPLQPASSISDHT-----PWLMPPTIPLASPFLPASTAPMQGKRKSI 611

Query: 264 YRQP 275
            R+P
Sbjct: 612 LREP 615

>P31369:PDM2_DROME POU domain protein 2 - Drosophila melanogaster (Fruit fly)|
          Length = 498

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
 Frame = +3

Query: 36  LQGKQVVAREEPWPPGTSYSDP----PRRRNPAPPSERLSCWEGRTPPLLAPWLRFPRSS 203
           LQ  +   RE+P P   SYS P    P R     P  R S  + RTPP          +S
Sbjct: 189 LQQMKQQQREDPLP---SYSTPLAKSPLRSPSLSPVPRHSKSQQRTPP----------NS 235

Query: 204 LAASFLGLSII*TTPRKRSSYRQP 275
           + A+ LG+S    TP   S  +QP
Sbjct: 236 MTANSLGMSSAVMTPNTPSMQQQP 259

>P55200:HRX_MOUSE Zinc finger protein HRX - Mus musculus (Mouse)|
          Length = 3966

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 22/64 (34%), Positives = 28/64 (43%)
 Frame = +3

Query: 84  TSYSDPPRRRNPAPPSERLSCWEGRTPPLLAPWLRFPRSSLAASFLGLSII*TTPRKRSS 263
           TS S PP    P PP +  S     T     PWL  P   LA+ FL  S      +++S 
Sbjct: 555 TSSSPPPPLLTPPPPLQPASGISDHT-----PWLMPPTIPLASPFLPASAAPMQGKRKSI 609

Query: 264 YRQP 275
            R+P
Sbjct: 610 LREP 613

>Q91VE1:PRM2_RATFU Protamine-2 - Rattus fuscipes (Bush rat)|
          Length = 105

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 33/104 (31%), Positives = 41/104 (39%)
 Frame = +1

Query: 43  GNKSSPGRSHGRQELLTPIPQGGGIQRRHPRGCLVGREERRHCWHRGCGSHVRRLPRPSL 222
           G    PG+ H R+E      QG G +    R    GR  R H  HR C    +RL R  +
Sbjct: 12  GPHQGPGQDHEREE------QGQGQELSPERVEDYGRTHRGHHRHRRCSR--KRLHR--I 61

Query: 223 G*A*SELHRASAHHIDSLCRRLLHHRG*NHSAKRKTKHNREDRR 354
                   R   H   S C R  H RG   S +R+    R+ RR
Sbjct: 62  HKRRRSCRRRRRH---SCCHRRRHRRGCRRSRRRRRCKCRKCRR 102

>Q9HBZ2:ARNT2_HUMAN Aryl hydrocarbon receptor nuclear translocator 2 - Homo sapiens|
           (Human)
          Length = 717

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
 Frame = +3

Query: 147 WEGRTPPLLAPWLRFPRSSLAASFLGLSII*TTPRKRSSYRQPVSPASSSPRIKPFCETQ 326
           W G  PP     +    S   +S  G+    T P   SSY    SPA+SSP    +    
Sbjct: 574 WTGSRPPFPGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSPSGNAYSSLA 633

Query: 327 DKT----QSGGSTSR 359
           ++T    +SG S+ +
Sbjct: 634 NRTPGFAESGQSSGQ 648

>Q7SFQ9:MRS2_NEUCR Inner membrane magnesium transporter MRS2, mitochondrial precursor|
           - Neurospora crassa
          Length = 547

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = -2

Query: 231 CLAQGRTRQATNVGTATTVPAMAAFFPPNKTASRMAALDSSSL------GDRSKKFLAAM 70
           C A G TR      ++TT  +++   PP +T  R   +D  ++        R+ K L A+
Sbjct: 47  CTAGGSTRPPRQPSSSTTTRSLSTATPPKRTQLRAGLVDLEAILPKSLRKQRTTKSLLAL 106

Query: 69  APP 61
            PP
Sbjct: 107 PPP 109

>O08717:INHBE_MOUSE Inhibin beta E chain precursor - Mus musculus (Mouse)|
          Length = 350

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -3

Query: 224 PKEGRGKRRT--WEPQ-PRCQQWRRSSLPTRQPLGWRRWIPPPWG 99
           P  GR +RRT   EP+ P C   RR      Q LGWR WI  P G
Sbjct: 228 PGAGRARRRTPTCEPETPLC--CRRDHYVDFQELGWRDWILQPEG 270

>Q9CZX2:CC123_MOUSE Coiled-coil domain-containing protein 123, mitochondrial precursor|
           - Mus musculus (Mouse)
          Length = 791

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
 Frame = +3

Query: 78  PGTSYSDPPRRRNPAPPSERLSCWEGRTPPLLAPWLRFPRSSLAASFLGLSII*TT---- 245
           P    + PPR  NP+P  ER                  PRS+LAA+ L  ++   T    
Sbjct: 30  PAVPRTPPPRSPNPSP--ER------------------PRSALAAAILATTLTGQTVAIP 69

Query: 246 -PRKRSSYRQPVSPASSSPRIKPFCETQD 329
            PR+RS      S       IKP+  T +
Sbjct: 70  QPRQRSRSESDASDIEKDSFIKPYATTSE 98

>Q8SQ03:CRX_CANFA Cone-rod homeobox protein - Canis familiaris (Dog)|
          Length = 299

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 40/154 (25%), Positives = 58/154 (37%), Gaps = 28/154 (18%)
 Frame = +3

Query: 18  WFNRKRLQGKQV--VAREEPWPPGTSYSDPPRRRNP--APPS------ERLSCWEGRTPP 167
           WF  +R + +Q     +E+P PPG      P +R    +P S      + L   +  +PP
Sbjct: 86  WFKNRRAKCRQQRQQQKEQPQPPGAQTKARPAKRKAGMSPRSSSDVCPDPLGISDSYSPP 145

Query: 168 LLAP-------------WLRFPRSSLAASFLGLSII*TTPRKRSSYRQPVSPASSSPRIK 308
           LL P             W     S L  +  G  +    P   + Y    +PAS+     
Sbjct: 146 LLGPSGSPTTAVATVSIWSPASESPLPEAQRGGLVASGPPLTSTPYAMTYAPASA----- 200

Query: 309 PFCETQDKTQSGGS-TSRLDPGLY----RIAGPA 395
            FC +     S  S  S LDP L     ++ GPA
Sbjct: 201 -FCSSPSAYGSPSSYFSGLDPYLSPMVPQLGGPA 233

>Q1KKS7:HXD3A_FUGRU Homeobox protein Hox-D3a - Fugu rubripes (Japanese pufferfish)|
           (Takifugu rubripes)
          Length = 408

 Score = 30.8 bits (68), Expect = 6.0
 Identities = 20/86 (23%), Positives = 35/86 (40%)
 Frame = -2

Query: 309 VLSAVMKKPATQAVDMMSACAV*FRLCLAQGRTRQATNVGTATTVPAMAAFFPPNKTASR 130
           + +  ++ PA +  D+   C    R    Q    Q TN+G     P  A+   PN ++S+
Sbjct: 47  IQTPTVRPPALKDADLNGDC---MRQSSNQSNGNQDTNIGEQPGPPLSASSPSPNSSSSQ 103

Query: 129 MAALDSSSLGDRSKKFLAAMAPPWRR 52
                SSS  + +   +     PW +
Sbjct: 104 KKKSPSSSANNSATPAITKQIFPWMK 129

>O02771:SMN_CANFA Survival motor neuron protein - Canis familiaris (Dog)|
          Length = 287

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +3

Query: 69  PWPPGTSYSDPPRRRNPAPPSERLSCW---EGRTPPLLAP 179
           P  PG  +S PP    P PP   LSCW       PP++ P
Sbjct: 203 PGKPGVKFSGPPP---PPPPPHFLSCWLPPFPSGPPIIPP 239

>Q9EP97:SENP3_MOUSE Sentrin-specific protease 3 - Mus musculus (Mouse)|
          Length = 568

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 66  EPWPPGTSYSDPPRRRN--PAPPSERLSCWEGRTP 164
           EP  PGT+YS+P R R   P PP  RL    G  P
Sbjct: 14  EPPGPGTTYSNPRRERLRWPLPPKPRLKSGGGFGP 48

>Q8K4G1:LTBP4_MOUSE Latent-transforming growth factor beta-binding protein 4 precursor|
           - Mus musculus (Mouse)
          Length = 1666

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 39/133 (29%), Positives = 45/133 (33%), Gaps = 11/133 (8%)
 Frame = +3

Query: 6   PPTAWFNRKRLQ-----GKQVVAREEPWPPGTSYSDP---PRRR-NPAPPSERLSCWEGR 158
           PPT +   +R +     G Q   R  P P     S P   PR R  P P  E     E R
Sbjct: 499 PPTGFLPTRRPEPRPDPGPQPEPRPRPEPRPRPESRPRPEPRPRPEPRPQPESQPRPESR 558

Query: 159 TPPLLAPWLRFPRSSLAASFLGLSII*TTPRKRSSYRQP--VSPASSSPRIKPFCETQDK 332
             P   PW  FP  S+ A + G  I  + P      R P    P    PR          
Sbjct: 559 PRPESQPWPEFPLPSIPA-WTGPEIPESGPSSSMCQRNPQVCGPGRCVPR---------- 607

Query: 333 TQSGGSTSRLDPG 371
               G T   DPG
Sbjct: 608 --PSGYTCACDPG 618

>O88959:INHBE_RAT Inhibin beta E chain precursor - Rattus norvegicus (Rat)|
          Length = 350

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = -3

Query: 224 PKEGRGKRRTWEPQPRCQQ-----WRRSSLPTRQPLGWRRWIPPPWG 99
           P  GR +RRT    P C+       RR      Q LGWR WI  P G
Sbjct: 228 PGAGRARRRT----PTCESETPLCCRRDHYVDFQELGWRDWILQPEG 270

>O94850:DEND_HUMAN Dendrin - Homo sapiens (Human)|
          Length = 657

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 13/114 (11%)
 Frame = +3

Query: 78  PGTSYSDPPRRRNPAPPSERLSC-------------WEGRTPPLLAPWLRFPRSSLAASF 218
           PG++++ P   R P PPS                  W+ R PP +AP           S+
Sbjct: 131 PGSAWAGPWGGRRPGPPSYEAHLLLRGSAGTAPRRRWD-RPPPYVAP----------PSY 179

Query: 219 LGLSII*TTPRKRSSYRQPVSPASSSPRIKPFCETQDKTQSGGSTSRLDPGLYR 380
            G      T R   + + P S A ++        T  +T  G +  RLDP +YR
Sbjct: 180 EGPHRTLGTKRGPGNSQVPTSSAPAA--------TPARTDGGRTKKRLDPRIYR 225

>P60940:UPPP_RHOPA Undecaprenyl-diphosphatase - Rhodopseudomonas palustris|
          Length = 268

 Score = 30.4 bits (67), Expect = 7.8
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +2

Query: 101 PKEEESSAAIREAVLLGG--KNAAIAGTVVAVPTFVACRVLPWAKHNLNYTAQALIISTA 274
           P    S A+I  A+LLG   ++AA     +A+PT +   V    K++ + TA  LII   
Sbjct: 162 PGVSRSGASIVAAMLLGTDKRSAAEFSFFLAIPTMLGAFVYDLYKNHADMTADNLIIVAI 221

Query: 275 CVAGFFITA 301
                FITA
Sbjct: 222 GFVVSFITA 230

>Q9LIP6:C71BV_ARATH Cytochrome P450 71B34 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 500

 Score = 30.4 bits (67), Expect = 7.8
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 233 NLNYTAQALIISTACVAGFFITADKTILRNARQNTIGR 346
           NLN T  AL +S  C   F +  + T+L + R N I R
Sbjct: 169 NLNKTLLALTVSVVCRTAFSVNFEGTVLNSERFNNIVR 206


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 152,525,259
Number of extensions: 3863421
Number of successful extensions: 11913
Number of sequences better than 10.0: 23
Number of HSP's gapped: 11817
Number of HSP's successfully gapped: 23
Length of query: 254
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 143
Effective length of database: 70,239,694
Effective search space: 10044276242
Effective search space used: 10044276242
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)