| Clone Name | FLbaf103o08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK071214:Os03g0747300 | 485 | e-137 | 2 | AK060347:Os03g0747300 | 485 | e-137 | 3 | AK073008:Os03g0130800 | 31 | 2.1 | 4 | AK099713:Os05g0318600 | 29 | 6.1 | 5 | AK072376:Os12g0637300 | 29 | 6.1 |
|---|
>AK071214:Os03g0747300 | Length = 282 Score = 485 bits (1249), Expect = e-137 Identities = 245/284 (86%), Positives = 258/284 (90%) Frame = +1 Query: 109 MAAPFFSTPFQPYVYQSQQGSVTAFQISGGDVQVLQVMVKSQDKLTAKPGTMCYMSGNIQ 288 MAAPFFSTPFQPYVYQSQ+GSVTAFQISGGDVQVLQVMVKSQ+KLT KPGTMCYMSGNIQ Sbjct: 1 MAAPFFSTPFQPYVYQSQEGSVTAFQISGGDVQVLQVMVKSQEKLTVKPGTMCYMSGNIQ 60 Query: 289 MDNNYLPENDGGVWQWIFGKSITSTVFFNPGPDDGYVGISAPFPGRILPIDLANFGGELL 468 DNNYLPENDGGVWQWIFGKSI+S+VFFNPG DDGYVGISAPFPGRILP+DLANFGGELL Sbjct: 61 TDNNYLPENDGGVWQWIFGKSISSSVFFNPGSDDGYVGISAPFPGRILPMDLANFGGELL 120 Query: 469 CQADSFLCXXXXXXXXXXXXQRPRNIEIGAEMILKQKLRGQGMAFLVGGGSVMQKILAPR 648 CQAD+FLC QRPRNIEIGAE+ILKQKLRGQGMAFLVGGGSVMQKILAPR Sbjct: 121 CQADAFLCSVNDVSVTSTVEQRPRNIEIGAEVILKQKLRGQGMAFLVGGGSVMQKILAPR 180 Query: 649 EVITVDCGCIVAMTSTISFQLQNPTQHRRAVLVFGGVNQLKASLTGPGVVFIQSLPFSRL 828 EVITVD CIVAMT+TI+FQL+ P Q RR +VF G NQL ASLTGPGVVFIQSLPF RL Sbjct: 181 EVITVDAACIVAMTTTINFQLKTPNQPRR--VVFSGGNQLTASLTGPGVVFIQSLPFHRL 238 Query: 829 SQRIASRSVAAPSLRDNPRFFIQIIMFFFLAYVMIVSSIILTDV 960 SQRIASRSVAAPSLRDNP+FFIQI+MFFFLAYVMIVSSIILTDV Sbjct: 239 SQRIASRSVAAPSLRDNPKFFIQIVMFFFLAYVMIVSSIILTDV 282
>AK060347:Os03g0747300 | Length = 282 Score = 485 bits (1249), Expect = e-137 Identities = 245/284 (86%), Positives = 258/284 (90%) Frame = +1 Query: 109 MAAPFFSTPFQPYVYQSQQGSVTAFQISGGDVQVLQVMVKSQDKLTAKPGTMCYMSGNIQ 288 MAAPFFSTPFQPYVYQSQ+GSVTAFQISGGDVQVLQVMVKSQ+KLT KPGTMCYMSGNIQ Sbjct: 1 MAAPFFSTPFQPYVYQSQEGSVTAFQISGGDVQVLQVMVKSQEKLTVKPGTMCYMSGNIQ 60 Query: 289 MDNNYLPENDGGVWQWIFGKSITSTVFFNPGPDDGYVGISAPFPGRILPIDLANFGGELL 468 DNNYLPENDGGVWQWIFGKSI+S+VFFNPG DDGYVGISAPFPGRILP+DLANFGGELL Sbjct: 61 TDNNYLPENDGGVWQWIFGKSISSSVFFNPGSDDGYVGISAPFPGRILPMDLANFGGELL 120 Query: 469 CQADSFLCXXXXXXXXXXXXQRPRNIEIGAEMILKQKLRGQGMAFLVGGGSVMQKILAPR 648 CQAD+FLC QRPRNIEIGAE+ILKQKLRGQGMAFLVGGGSVMQKILAPR Sbjct: 121 CQADAFLCSVNDVSVTSTVEQRPRNIEIGAEVILKQKLRGQGMAFLVGGGSVMQKILAPR 180 Query: 649 EVITVDCGCIVAMTSTISFQLQNPTQHRRAVLVFGGVNQLKASLTGPGVVFIQSLPFSRL 828 EVITVD CIVAMT+TI+FQL+ P Q RR +VF G NQL ASLTGPGVVFIQSLPF RL Sbjct: 181 EVITVDAACIVAMTTTINFQLKTPNQPRR--VVFSGGNQLTASLTGPGVVFIQSLPFHRL 238 Query: 829 SQRIASRSVAAPSLRDNPRFFIQIIMFFFLAYVMIVSSIILTDV 960 SQRIASRSVAAPSLRDNP+FFIQI+MFFFLAYVMIVSSIILTDV Sbjct: 239 SQRIASRSVAAPSLRDNPKFFIQIVMFFFLAYVMIVSSIILTDV 282
>AK073008:Os03g0130800 | Length = 619 Score = 30.8 bits (68), Expect = 2.1 Identities = 22/69 (31%), Positives = 29/69 (42%) Frame = +2 Query: 1049 PPSLLCRCRVPGMSKPEKKSHSCC*KT*WKVCQFSFVMVCNDEPLFVCTQQAQVAQHRVN 1228 PP LLC R PG+ K +K S VC D+ +A A V Sbjct: 27 PPGLLCCKRCPGLKKRQKSS----------------FFVCQDD-------EAPAAAVVVK 63 Query: 1229 ITVDKKKKK 1255 + V++KKKK Sbjct: 64 VEVEEKKKK 72
>AK099713:Os05g0318600 | Length = 564 Score = 29.3 bits (64), Expect = 6.1 Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 15/165 (9%) Frame = +1 Query: 31 PIPKTTLRVGSH*SLLEASTELRPAAMAAPFFSTPFQPYVYQSQQGSVTAFQISGGDVQV 210 P+P T R+ S S L P + F F P Y + + F ++ G + + Sbjct: 79 PVPYMTARIFS--SNFTYWFGLNPGRV---FLRLYFYPTEYADRAAADALFSVTAGILVL 133 Query: 211 LQVMVKSQDKLTAKPGTMCYM---------SGNIQMDNNYLPENDGGVWQWIFGKSITST 363 L SQ A Y+ SG++ + + P + G + ++ G + ST Sbjct: 134 LNDFNPSQ---VAHAMGRTYLILEYSVNVPSGDLDVTFSLSPHHTGS-YAFVNGIEVVST 189 Query: 364 --VFFNPGPDDGYVGISAPFPGRI----LPIDLANFGGELLCQAD 480 +F P P VGIS PFP + + N GGE + D Sbjct: 190 PDIFTKPAPTFLNVGISDPFPISVNIGLQTMYRLNVGGETISPKD 234
>AK072376:Os12g0637300 | Length = 135 Score = 29.3 bits (64), Expect = 6.1 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -3 Query: 1029 FDSSNFQGTS*QDYTKCSSQHHLNIRQNY*RHNHDIGQEE 910 F+S+N QGT+ SSQH N+ +N+ R D + E Sbjct: 87 FNSANLQGTTSTTRQNISSQHLRNVARNFVRSRTDQARGE 126 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 38,859,695 Number of extensions: 931956 Number of successful extensions: 2543 Number of sequences better than 10.0: 5 Number of HSP's gapped: 2539 Number of HSP's successfully gapped: 5 Length of query: 418 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 315 Effective length of database: 11,275,632 Effective search space: 3551824080 Effective search space used: 3551824080 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)