ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf103o08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK071214:Os03g0747300 485 e-137
2AK060347:Os03g0747300 485 e-137
3AK073008:Os03g0130800 31 2.1
4AK099713:Os05g0318600 29 6.1
5AK072376:Os12g0637300 29 6.1

>AK071214:Os03g0747300 |
          Length = 282
 Score =  485 bits (1249), Expect = e-137
 Identities = 245/284 (86%), Positives = 258/284 (90%)
 Frame = +1

Query: 109 MAAPFFSTPFQPYVYQSQQGSVTAFQISGGDVQVLQVMVKSQDKLTAKPGTMCYMSGNIQ 288
           MAAPFFSTPFQPYVYQSQ+GSVTAFQISGGDVQVLQVMVKSQ+KLT KPGTMCYMSGNIQ
Sbjct: 1   MAAPFFSTPFQPYVYQSQEGSVTAFQISGGDVQVLQVMVKSQEKLTVKPGTMCYMSGNIQ 60

Query: 289 MDNNYLPENDGGVWQWIFGKSITSTVFFNPGPDDGYVGISAPFPGRILPIDLANFGGELL 468
            DNNYLPENDGGVWQWIFGKSI+S+VFFNPG DDGYVGISAPFPGRILP+DLANFGGELL
Sbjct: 61  TDNNYLPENDGGVWQWIFGKSISSSVFFNPGSDDGYVGISAPFPGRILPMDLANFGGELL 120

Query: 469 CQADSFLCXXXXXXXXXXXXQRPRNIEIGAEMILKQKLRGQGMAFLVGGGSVMQKILAPR 648
           CQAD+FLC            QRPRNIEIGAE+ILKQKLRGQGMAFLVGGGSVMQKILAPR
Sbjct: 121 CQADAFLCSVNDVSVTSTVEQRPRNIEIGAEVILKQKLRGQGMAFLVGGGSVMQKILAPR 180

Query: 649 EVITVDCGCIVAMTSTISFQLQNPTQHRRAVLVFGGVNQLKASLTGPGVVFIQSLPFSRL 828
           EVITVD  CIVAMT+TI+FQL+ P Q RR  +VF G NQL ASLTGPGVVFIQSLPF RL
Sbjct: 181 EVITVDAACIVAMTTTINFQLKTPNQPRR--VVFSGGNQLTASLTGPGVVFIQSLPFHRL 238

Query: 829 SQRIASRSVAAPSLRDNPRFFIQIIMFFFLAYVMIVSSIILTDV 960
           SQRIASRSVAAPSLRDNP+FFIQI+MFFFLAYVMIVSSIILTDV
Sbjct: 239 SQRIASRSVAAPSLRDNPKFFIQIVMFFFLAYVMIVSSIILTDV 282



to top

>AK060347:Os03g0747300 |
          Length = 282

 Score =  485 bits (1249), Expect = e-137
 Identities = 245/284 (86%), Positives = 258/284 (90%)
 Frame = +1

Query: 109 MAAPFFSTPFQPYVYQSQQGSVTAFQISGGDVQVLQVMVKSQDKLTAKPGTMCYMSGNIQ 288
           MAAPFFSTPFQPYVYQSQ+GSVTAFQISGGDVQVLQVMVKSQ+KLT KPGTMCYMSGNIQ
Sbjct: 1   MAAPFFSTPFQPYVYQSQEGSVTAFQISGGDVQVLQVMVKSQEKLTVKPGTMCYMSGNIQ 60

Query: 289 MDNNYLPENDGGVWQWIFGKSITSTVFFNPGPDDGYVGISAPFPGRILPIDLANFGGELL 468
            DNNYLPENDGGVWQWIFGKSI+S+VFFNPG DDGYVGISAPFPGRILP+DLANFGGELL
Sbjct: 61  TDNNYLPENDGGVWQWIFGKSISSSVFFNPGSDDGYVGISAPFPGRILPMDLANFGGELL 120

Query: 469 CQADSFLCXXXXXXXXXXXXQRPRNIEIGAEMILKQKLRGQGMAFLVGGGSVMQKILAPR 648
           CQAD+FLC            QRPRNIEIGAE+ILKQKLRGQGMAFLVGGGSVMQKILAPR
Sbjct: 121 CQADAFLCSVNDVSVTSTVEQRPRNIEIGAEVILKQKLRGQGMAFLVGGGSVMQKILAPR 180

Query: 649 EVITVDCGCIVAMTSTISFQLQNPTQHRRAVLVFGGVNQLKASLTGPGVVFIQSLPFSRL 828
           EVITVD  CIVAMT+TI+FQL+ P Q RR  +VF G NQL ASLTGPGVVFIQSLPF RL
Sbjct: 181 EVITVDAACIVAMTTTINFQLKTPNQPRR--VVFSGGNQLTASLTGPGVVFIQSLPFHRL 238

Query: 829 SQRIASRSVAAPSLRDNPRFFIQIIMFFFLAYVMIVSSIILTDV 960
           SQRIASRSVAAPSLRDNP+FFIQI+MFFFLAYVMIVSSIILTDV
Sbjct: 239 SQRIASRSVAAPSLRDNPKFFIQIVMFFFLAYVMIVSSIILTDV 282



to top

>AK073008:Os03g0130800 |
          Length = 619

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = +2

Query: 1049 PPSLLCRCRVPGMSKPEKKSHSCC*KT*WKVCQFSFVMVCNDEPLFVCTQQAQVAQHRVN 1228
            PP LLC  R PG+ K +K S                  VC D+       +A  A   V 
Sbjct: 27   PPGLLCCKRCPGLKKRQKSS----------------FFVCQDD-------EAPAAAVVVK 63

Query: 1229 ITVDKKKKK 1255
            + V++KKKK
Sbjct: 64   VEVEEKKKK 72



to top

>AK099713:Os05g0318600 |
          Length = 564

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 15/165 (9%)
 Frame = +1

Query: 31  PIPKTTLRVGSH*SLLEASTELRPAAMAAPFFSTPFQPYVYQSQQGSVTAFQISGGDVQV 210
           P+P  T R+ S  S       L P  +   F    F P  Y  +  +   F ++ G + +
Sbjct: 79  PVPYMTARIFS--SNFTYWFGLNPGRV---FLRLYFYPTEYADRAAADALFSVTAGILVL 133

Query: 211 LQVMVKSQDKLTAKPGTMCYM---------SGNIQMDNNYLPENDGGVWQWIFGKSITST 363
           L     SQ    A      Y+         SG++ +  +  P + G  + ++ G  + ST
Sbjct: 134 LNDFNPSQ---VAHAMGRTYLILEYSVNVPSGDLDVTFSLSPHHTGS-YAFVNGIEVVST 189

Query: 364 --VFFNPGPDDGYVGISAPFPGRI----LPIDLANFGGELLCQAD 480
             +F  P P    VGIS PFP  +      +   N GGE +   D
Sbjct: 190 PDIFTKPAPTFLNVGISDPFPISVNIGLQTMYRLNVGGETISPKD 234



to top

>AK072376:Os12g0637300 |
          Length = 135

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 1029 FDSSNFQGTS*QDYTKCSSQHHLNIRQNY*RHNHDIGQEE 910
            F+S+N QGT+       SSQH  N+ +N+ R   D  + E
Sbjct: 87   FNSANLQGTTSTTRQNISSQHLRNVARNFVRSRTDQARGE 126


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 38,859,695
Number of extensions: 931956
Number of successful extensions: 2543
Number of sequences better than 10.0: 5
Number of HSP's gapped: 2539
Number of HSP's successfully gapped: 5
Length of query: 418
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 315
Effective length of database: 11,275,632
Effective search space: 3551824080
Effective search space used: 3551824080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top