No.
Definition
Score (bits)
E Value
1 ref|NM_001061682.1| Oryza sativa (japonica cultivar-group) Os05g...
876
0.0
2 dbj|AK099553.1| Oryza sativa (japonica cultivar-group) cDNA clon...
876
0.0
3 gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome...
157
2e-34
4 gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome...
157
2e-34
5 gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome...
157
2e-34
6 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
157
2e-34
7 ref|NM_130073.1| Arabidopsis thaliana RNA polymerase II transcri...
62
1e-05
8 emb|BX819461.1|CNS0A9UH Arabidopsis thaliana Full-length cDNA Co...
62
1e-05
9 gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G1...
58
2e-04
10 gb|AY286093.1| Triticum aestivum chalcone synthase (CHS) gene, c...
54
0.003
11 emb|BX820754.1|CNS0A9IK Arabidopsis thaliana Full-length cDNA Co...
54
0.003
12 ref|XM_001184369.1| PREDICTED: Strongylocentrotus purpuratus sim...
50
0.040
13 ref|XM_788918.2| PREDICTED: Strongylocentrotus purpuratus simila...
50
0.040
14 dbj|AK226688.1| Arabidopsis thaliana mRNA for putative transcrip...
48
0.16
15 ref|NM_111770.1| Arabidopsis thaliana RNA polymerase II transcri...
48
0.16
16 ref|NM_126189.2| Arabidopsis thaliana RNA polymerase II transcri...
48
0.16
17 gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, comple...
46
0.62
18 gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map...
46
0.62
19 emb|AL049649.7|HSJ734C18 Human DNA sequence from clone RP4-734C1...
46
0.62
20 gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II sectio...
46
0.62
21 gb|AE015451.1| Pseudomonas putida KT2440 complete genome
46
0.62
22 gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome
44
2.4
23 gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14...
44
2.4
24 gb|AC145580.3| Mus musculus BAC clone RP24-380D12 from chromosom...
44
2.4
25 gb|AC118603.9| Mus musculus chromosome 16, clone RP24-79L6, comp...
44
2.4
26 gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence
44
2.4
27 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
44
2.4
28 gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome...
44
2.4
29 emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gen...
44
2.4
30 gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome...
44
2.4
31 gb|AC011746.6| Homo sapiens BAC clone RP11-332A19 from 2, comple...
44
2.4
32 gb|AY196347.1| Hordeum vulgare subsp. vulgare MLA12 (Mla12) gene...
44
2.4
33 emb|BX465834.20| Zebrafish DNA sequence from clone CH211-202E12 ...
44
2.4
34 emb|CT009682.6| Mouse DNA sequence from clone RP23-136H15 on chr...
44
2.4
35 ref|XM_001022921.1| Tetrahymena thermophila SB210 cyclic nucleot...
42
9.7
36 ref|XM_001015397.1| Tetrahymena thermophila SB210 merozoite surf...
42
9.7
37 emb|CR387931.9| Zebrafish DNA sequence from clone CH211-169D8 in...
42
9.7
38 gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
42
9.7
39 ref|XM_639621.1| Dictyostelium discoideum AX4 hypothetical prote...
42
9.7
40 ref|XM_639445.1| Dictyostelium discoideum AX4 hypothetical prote...
42
9.7
41 ref|XM_629481.1| Dictyostelium discoideum AX4 hypothetical prote...
42
9.7
42 gb|AC150425.2| Branchiostoma floridae clone CH302-81E17, complet...
42
9.7
43 gb|AF121351.2| Mus musculus chromosome X clone CT7-228O4 complet...
42
9.7
44 gb|AC091472.2| Mus musculus chromosome X clones RP21-90B15, RP21...
42
9.7
45 gb|AC134560.5| Mus musculus BAC clone RP24-100B13 from chromosom...
42
9.7
46 gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosom...
42
9.7
47 gb|AF262562.2| Branchiostoma floridae T-box protein AmphiTbx1/10...
42
9.7
48 gb|AC132418.3| Mus musculus BAC clone RP23-251N2 from chromosome...
42
9.7
49 gb|AC140248.3| Mus musculus BAC clone RP24-285L8 from chromosome...
42
9.7
50 gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosom...
42
9.7
51 gb|BC114242.1| Danio rerio zgc:113342, mRNA (cDNA clone MGC:1366...
42
9.7
52 gb|AC132139.4| Mus musculus BAC clone RP23-181A24 from chromosom...
42
9.7
53 ref|NM_078331.2| Caenorhabditis elegans F39F10.4 (F39F10.4) mRNA...
42
9.7
54 gb|AC099652.2| Homo sapiens BAC clone RP11-750J7 from 7, complet...
42
9.7
55 gb|AC103590.2| Homo sapiens chromosome 1 clone RP11-544K18, comp...
42
9.7
56 emb|Z84484.1|HS50J22 Human DNA sequence from clone RP1-50J22 on ...
42
9.7
57 emb|BX571818.3| Human DNA sequence from clone RP11-38J22 on chro...
42
9.7
58 ref|XM_684256.1| PREDICTED: Danio rerio similar to EH domain bin...
42
9.7
59 ref|XM_696554.1| PREDICTED: Danio rerio similar to zgc:113342 (L...
42
9.7
60 emb|AL445435.11| Human DNA sequence from clone RP11-568G11 on ch...
42
9.7
61 gb|AF306828.1|AF306828 Triticum turgidum subsp. dicoccoides clon...
42
9.7
62 emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ...
42
9.7
63 emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BA...
42
9.7
64 emb|CR318587.6| Zebrafish DNA sequence from clone CH211-171B20 i...
42
9.7
65 emb|BX649529.23| Zebrafish DNA sequence from clone DKEYP-74F1 in...
42
9.7
66 emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on ch...
42
9.7
67 gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470...
42
9.7
68 gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge...
42
9.7
69 emb|BX005418.11| Zebrafish DNA sequence from clone CH211-284C3, ...
42
9.7
70 dbj|AP006401.1| Lotus japonicus genomic DNA, chromosome 4, clone...
42
9.7
71 gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156...
42
9.7
72 ref|NM_001013321.1| Danio rerio zgc:113342 (zgc:113342), mRNA >g...
42
9.7
73 dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, sectio...
42
9.7
74 gb|AY104178.1| Zea mays PCO133155 mRNA sequence
42
9.7
75 gb|U58743.1| Caenorhabditis elegans cosmid F39F10, complete sequ...
42
9.7
76 gb|AC122424.4| Mus musculus BAC clone RP24-173E19 from 8, comple...
42
9.7
77 gb|AC005224.1|AC005224 Homo sapiens chromosome 17, clone hRPK.21...
42
9.7
78 emb|AL732543.8| Mouse DNA sequence from clone RP23-13D22 on chro...
42
9.7
79 emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on ch...
42
9.7
80 dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:K...
42
9.7
>gb|AC136525.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02,
complete sequence
Length = 138677
Score = 157 bits (79), Expect = 2e-34
Identities = 106/115 (92%)
Strand = Plus / Plus
Query: 816 ttatgtcctaggtgctgtttttctgcaactttgccaagttttgctacttgcagaacatcc 875
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 70407 ttatgtcctaggtgctgtttttctgcagctttgccaagttttgctacttgcggaacatcc 70466
Query: 876 aattgttcagaaactcatagaccccagccttttcatccatcgttttacagaacgt 930
| || | || || ||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 70467 agttatccaaaagctcatcgaccccagccttttcatacatcgttttacagaacgt 70521
Score = 121 bits (61), Expect = 1e-23
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 1096 gttgcggttgtgcatgtatgtgaggcaacactaactaagcgcttgatagagtttgaaaat 1155
||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 71744 gttgctgttgtgcatgtttgcgaggcaacactaactaagcgcttgatagagtttgaaaat 71803
Query: 1156 acagattctggcagcttaacg 1176
|||||||| || |||||||||
Sbjct: 71804 acagattcgggtagcttaacg 71824
Score = 113 bits (57), Expect = 3e-21
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 679 tagctagctgtggaccataattttacaaggggccgtcgaacaactcatgttgcagcagct 738
||||||||||| ||| | ||||||||||||||||||||||||||||||||||| || |||
Sbjct: 69432 tagctagctgttgacaagaattttacaaggggccgtcgaacaactcatgttgctgctgct 69491
Query: 739 tgcctttacattgcctgccgg 759
|||||||| ||||||||||||
Sbjct: 69492 tgcctttatattgcctgccgg 69512
Score = 103 bits (52), Expect = 3e-18
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1321 aaactgtcgggtggactggagggtggtgctgaccctccagctttccaacgagctgaaaaa 1380
|||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 73109 aaactgtctggtggactggagggtggctctgatcctccagctttccaacgagctgaaaaa 73168
Query: 1381 caaagactggaagctgctaa 1400
||||| |||| ||||||||
Sbjct: 73169 caaaggttggaggctgctaa 73188
Score = 99.6 bits (50), Expect = 5e-17
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 1004 tgcagactgggaggaagccaagtggattatgtggtgcagcattatatattgctgcacttt 1063
|||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||| || |
Sbjct: 71467 tgcagactgggaggaaaccaagtggattgtgtggtgcagcactatatatcgctgctctct 71526
Query: 1064 cacatggctataattataccaagtcaaatattgt 1097
| ||||| ||| ||||||||||| || |||||||
Sbjct: 71527 ctcatggatatgattataccaaggcagatattgt 71560
Score = 99.6 bits (50), Expect = 5e-17
Identities = 120/142 (84%), Gaps = 6/142 (4%)
Strand = Plus / Plus
Query: 1176 gattgaagattttttggcaaaggctgatgaaga---gcctgtttcaatattttcacccat 1232
||||||||| ||||||||||||||||||||| | || |||| | | | ||||||| |
Sbjct: 72888 gattgaagaatttttggcaaaggctgatgaacaagtgcttgttactaaaatttcaccaaa 72947
Query: 1233 acctggagaagtcctctgcaagcacaaggataaagctgctgagcattttgctcatggact 1292
|||||||||| || |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 72948 gtctggagaagtactttgcaagcacaaggataaagctg---agcattttgctcatggact 73004
Query: 1293 ttgtgagaagtgctacaacaaa 1314
||||| || ||||||||||||
Sbjct: 73005 ctgtgaaaaatgctacaacaaa 73026
Score = 95.6 bits (48), Expect = 7e-16
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 929 gtttacttgggaaaagggacaatgctgtctcagacacagctttacgcatcgtagctagca 988
||||||| ||||| ||||||||||| || ||||| || ||||||||||| ||||||||||
Sbjct: 71322 gtttactggggaagagggacaatgccgtatcagatacggctttacgcattgtagctagca 71381
Query: 989 tgaaacgagactggatgcag 1008
|||| |||||||||||||||
Sbjct: 71382 tgaagcgagactggatgcag 71401
Score = 95.6 bits (48), Expect = 7e-16
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 1646 aggttgacgggtatcttcacaatgaggaagagacacagtacaaaaagataatttgggagg 1705
||||||| ||||| |||||||| |||||||| |||||||||||||| || || |||||||
Sbjct: 75178 aggttgatgggtaccttcacaacgaggaagaaacacagtacaaaaaaattatctgggagg 75237
Query: 1706 aaatgaacaaagaataccttgagg 1729
||||||| ||||| ||||||||||
Sbjct: 75238 aaatgaataaagagtaccttgagg 75261
Score = 75.8 bits (38), Expect = 7e-10
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 2127 gacactggtgatggtgaaacattagaaggtggctatgactatgctgattacaataacgat 2186
||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||| | |||
Sbjct: 77218 gacacaggtgatggtgaaacattcgaaggtggttatgattatcctgattacaactatgat 77277
Query: 2187 ggctatgctgatgg 2200
||||||| ||||||
Sbjct: 77278 ggctatggtgatgg 77291
Score = 71.9 bits (36), Expect = 1e-08
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 593 agagacgagatttggcagattgtcaccagcttacatgttggtggtggagatactat 648
||||| |||||| |||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 69159 agagaggagattaggcagattgtcagcagcttacatgtggctggtggagatactat 69214
Score = 71.9 bits (36), Expect = 1e-08
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 758 ggcaaagtaaaaaggcttatcttcttatcgatttctcggactatttgaagat 809
|||||||||||||||| ||||||||||| |||||||||||| ||||| ||||
Sbjct: 70278 ggcaaagtaaaaaggcatatcttcttattgatttctcggaccatttgcagat 70329
Score = 54.0 bits (27), Expect = 0.003
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1727 aggaacaagccgcaaaggaagctttagcagctgaattggcagctagaggtgtgggcgtgg 1786
|||||||||| ||||| | ||| ||||||||||| ||||||||||||| |||| ||||
Sbjct: 75340 aggaacaagcagcaaaagcagcattagcagctgagctggcagctagaggagtggttgtgg 75399
Query: 1787 gagaggg 1793
||||||
Sbjct: 75400 aagaggg 75406
Score = 46.1 bits (23), Expect = 0.62
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 1587 aggtgaaaatggtaaagctgatgctgatccagaaagtttttctgatattgatgatgtgga 1646
|||| |||||| |||||| |||| | ||| |||||| | |||||||||||||||| |||
Sbjct: 74989 aggtaaaaatgataaagcagatgaaggtcctgaaagtctctctgatattgatgatgcgga 75048
Query: 1647 ggt 1649
|||
Sbjct: 75049 ggt 75051
>gb|AC130724.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone P0409G01,
complete sequence
Length = 143263
Score = 157 bits (79), Expect = 2e-34
Identities = 106/115 (92%)
Strand = Plus / Plus
Query: 816 ttatgtcctaggtgctgtttttctgcaactttgccaagttttgctacttgcagaacatcc 875
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 12325 ttatgtcctaggtgctgtttttctgcagctttgccaagttttgctacttgcggaacatcc 12384
Query: 876 aattgttcagaaactcatagaccccagccttttcatccatcgttttacagaacgt 930
| || | || || ||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 12385 agttatccaaaagctcatcgaccccagccttttcatacatcgttttacagaacgt 12439
Score = 121 bits (61), Expect = 1e-23
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 1096 gttgcggttgtgcatgtatgtgaggcaacactaactaagcgcttgatagagtttgaaaat 1155
||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 13662 gttgctgttgtgcatgtttgcgaggcaacactaactaagcgcttgatagagtttgaaaat 13721
Query: 1156 acagattctggcagcttaacg 1176
|||||||| || |||||||||
Sbjct: 13722 acagattcgggtagcttaacg 13742
Score = 113 bits (57), Expect = 3e-21
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 679 tagctagctgtggaccataattttacaaggggccgtcgaacaactcatgttgcagcagct 738
||||||||||| ||| | ||||||||||||||||||||||||||||||||||| || |||
Sbjct: 11350 tagctagctgttgacaagaattttacaaggggccgtcgaacaactcatgttgctgctgct 11409
Query: 739 tgcctttacattgcctgccgg 759
|||||||| ||||||||||||
Sbjct: 11410 tgcctttatattgcctgccgg 11430
Score = 103 bits (52), Expect = 3e-18
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1321 aaactgtcgggtggactggagggtggtgctgaccctccagctttccaacgagctgaaaaa 1380
|||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 15027 aaactgtctggtggactggagggtggctctgatcctccagctttccaacgagctgaaaaa 15086
Query: 1381 caaagactggaagctgctaa 1400
||||| |||| ||||||||
Sbjct: 15087 caaaggttggaggctgctaa 15106
Score = 99.6 bits (50), Expect = 5e-17
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 1004 tgcagactgggaggaagccaagtggattatgtggtgcagcattatatattgctgcacttt 1063
|||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||| || |
Sbjct: 13385 tgcagactgggaggaaaccaagtggattgtgtggtgcagcactatatatcgctgctctct 13444
Query: 1064 cacatggctataattataccaagtcaaatattgt 1097
| ||||| ||| ||||||||||| || |||||||
Sbjct: 13445 ctcatggatatgattataccaaggcagatattgt 13478
Score = 99.6 bits (50), Expect = 5e-17
Identities = 120/142 (84%), Gaps = 6/142 (4%)
Strand = Plus / Plus
Query: 1176 gattgaagattttttggcaaaggctgatgaaga---gcctgtttcaatattttcacccat 1232
||||||||| ||||||||||||||||||||| | || |||| | | | ||||||| |
Sbjct: 14806 gattgaagaatttttggcaaaggctgatgaacaagtgcttgttactaaaatttcaccaaa 14865
Query: 1233 acctggagaagtcctctgcaagcacaaggataaagctgctgagcattttgctcatggact 1292
|||||||||| || |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 14866 gtctggagaagtactttgcaagcacaaggataaagctg---agcattttgctcatggact 14922
Query: 1293 ttgtgagaagtgctacaacaaa 1314
||||| || ||||||||||||
Sbjct: 14923 ctgtgaaaaatgctacaacaaa 14944
Score = 95.6 bits (48), Expect = 7e-16
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 929 gtttacttgggaaaagggacaatgctgtctcagacacagctttacgcatcgtagctagca 988
||||||| ||||| ||||||||||| || ||||| || ||||||||||| ||||||||||
Sbjct: 13240 gtttactggggaagagggacaatgccgtatcagatacggctttacgcattgtagctagca 13299
Query: 989 tgaaacgagactggatgcag 1008
|||| |||||||||||||||
Sbjct: 13300 tgaagcgagactggatgcag 13319
Score = 95.6 bits (48), Expect = 7e-16
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 1646 aggttgacgggtatcttcacaatgaggaagagacacagtacaaaaagataatttgggagg 1705
||||||| ||||| |||||||| |||||||| |||||||||||||| || || |||||||
Sbjct: 17096 aggttgatgggtaccttcacaacgaggaagaaacacagtacaaaaaaattatctgggagg 17155
Query: 1706 aaatgaacaaagaataccttgagg 1729
||||||| ||||| ||||||||||
Sbjct: 17156 aaatgaataaagagtaccttgagg 17179
Score = 75.8 bits (38), Expect = 7e-10
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 2127 gacactggtgatggtgaaacattagaaggtggctatgactatgctgattacaataacgat 2186
||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||| | |||
Sbjct: 19136 gacacaggtgatggtgaaacattcgaaggtggttatgattatcctgattacaactatgat 19195
Query: 2187 ggctatgctgatgg 2200
||||||| ||||||
Sbjct: 19196 ggctatggtgatgg 19209
Score = 71.9 bits (36), Expect = 1e-08
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 593 agagacgagatttggcagattgtcaccagcttacatgttggtggtggagatactat 648
||||| |||||| |||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 11077 agagaggagattaggcagattgtcagcagcttacatgtggctggtggagatactat 11132
Score = 71.9 bits (36), Expect = 1e-08
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 758 ggcaaagtaaaaaggcttatcttcttatcgatttctcggactatttgaagat 809
|||||||||||||||| ||||||||||| |||||||||||| ||||| ||||
Sbjct: 12196 ggcaaagtaaaaaggcatatcttcttattgatttctcggaccatttgcagat 12247
Score = 54.0 bits (27), Expect = 0.003
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1727 aggaacaagccgcaaaggaagctttagcagctgaattggcagctagaggtgtgggcgtgg 1786
|||||||||| ||||| | ||| ||||||||||| ||||||||||||| |||| ||||
Sbjct: 17258 aggaacaagcagcaaaagcagcattagcagctgagctggcagctagaggagtggttgtgg 17317
Query: 1787 gagaggg 1793
||||||
Sbjct: 17318 aagaggg 17324
Score = 46.1 bits (23), Expect = 0.62
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 1587 aggtgaaaatggtaaagctgatgctgatccagaaagtttttctgatattgatgatgtgga 1646
|||| |||||| |||||| |||| | ||| |||||| | |||||||||||||||| |||
Sbjct: 16907 aggtaaaaatgataaagcagatgaaggtcctgaaagtctctctgatattgatgatgcgga 16966
Query: 1647 ggt 1649
|||
Sbjct: 16967 ggt 16969
>gb|AC145476.2 | Oryza sativa (japonica cultivar-group) chromosome 5 clone B1023E01,
complete sequence
Length = 140322
Score = 157 bits (79), Expect = 2e-34
Identities = 106/115 (92%)
Strand = Plus / Plus
Query: 816 ttatgtcctaggtgctgtttttctgcaactttgccaagttttgctacttgcagaacatcc 875
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 97174 ttatgtcctaggtgctgtttttctgcagctttgccaagttttgctacttgcggaacatcc 97233
Query: 876 aattgttcagaaactcatagaccccagccttttcatccatcgttttacagaacgt 930
| || | || || ||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 97234 agttatccaaaagctcatcgaccccagccttttcatacatcgttttacagaacgt 97288
Score = 121 bits (61), Expect = 1e-23
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 1096 gttgcggttgtgcatgtatgtgaggcaacactaactaagcgcttgatagagtttgaaaat 1155
||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 98511 gttgctgttgtgcatgtttgcgaggcaacactaactaagcgcttgatagagtttgaaaat 98570
Query: 1156 acagattctggcagcttaacg 1176
|||||||| || |||||||||
Sbjct: 98571 acagattcgggtagcttaacg 98591
Score = 113 bits (57), Expect = 3e-21
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 679 tagctagctgtggaccataattttacaaggggccgtcgaacaactcatgttgcagcagct 738
||||||||||| ||| | ||||||||||||||||||||||||||||||||||| || |||
Sbjct: 96199 tagctagctgttgacaagaattttacaaggggccgtcgaacaactcatgttgctgctgct 96258
Query: 739 tgcctttacattgcctgccgg 759
|||||||| ||||||||||||
Sbjct: 96259 tgcctttatattgcctgccgg 96279
Score = 103 bits (52), Expect = 3e-18
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1321 aaactgtcgggtggactggagggtggtgctgaccctccagctttccaacgagctgaaaaa 1380
|||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 99876 aaactgtctggtggactggagggtggctctgatcctccagctttccaacgagctgaaaaa 99935
Query: 1381 caaagactggaagctgctaa 1400
||||| |||| ||||||||
Sbjct: 99936 caaaggttggaggctgctaa 99955
Score = 99.6 bits (50), Expect = 5e-17
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 1004 tgcagactgggaggaagccaagtggattatgtggtgcagcattatatattgctgcacttt 1063
|||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||| || |
Sbjct: 98234 tgcagactgggaggaaaccaagtggattgtgtggtgcagcactatatatcgctgctctct 98293
Query: 1064 cacatggctataattataccaagtcaaatattgt 1097
| ||||| ||| ||||||||||| || |||||||
Sbjct: 98294 ctcatggatatgattataccaaggcagatattgt 98327
Score = 99.6 bits (50), Expect = 5e-17
Identities = 120/142 (84%), Gaps = 6/142 (4%)
Strand = Plus / Plus
Query: 1176 gattgaagattttttggcaaaggctgatgaaga---gcctgtttcaatattttcacccat 1232
||||||||| ||||||||||||||||||||| | || |||| | | | ||||||| |
Sbjct: 99655 gattgaagaatttttggcaaaggctgatgaacaagtgcttgttactaaaatttcaccaaa 99714
Query: 1233 acctggagaagtcctctgcaagcacaaggataaagctgctgagcattttgctcatggact 1292
|||||||||| || |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 99715 gtctggagaagtactttgcaagcacaaggataaagctg---agcattttgctcatggact 99771
Query: 1293 ttgtgagaagtgctacaacaaa 1314
||||| || ||||||||||||
Sbjct: 99772 ctgtgaaaaatgctacaacaaa 99793
Score = 95.6 bits (48), Expect = 7e-16
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 929 gtttacttgggaaaagggacaatgctgtctcagacacagctttacgcatcgtagctagca 988
||||||| ||||| ||||||||||| || ||||| || ||||||||||| ||||||||||
Sbjct: 98089 gtttactggggaagagggacaatgccgtatcagatacggctttacgcattgtagctagca 98148
Query: 989 tgaaacgagactggatgcag 1008
|||| |||||||||||||||
Sbjct: 98149 tgaagcgagactggatgcag 98168
Score = 95.6 bits (48), Expect = 7e-16
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 1646 aggttgacgggtatcttcacaatgaggaagagacacagtacaaaaagataatttgggagg 1705
||||||| ||||| |||||||| |||||||| |||||||||||||| || || |||||||
Sbjct: 101945 aggttgatgggtaccttcacaacgaggaagaaacacagtacaaaaaaattatctgggagg 102004
Query: 1706 aaatgaacaaagaataccttgagg 1729
||||||| ||||| ||||||||||
Sbjct: 102005 aaatgaataaagagtaccttgagg 102028
Score = 75.8 bits (38), Expect = 7e-10
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 2127 gacactggtgatggtgaaacattagaaggtggctatgactatgctgattacaataacgat 2186
||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||| | |||
Sbjct: 103985 gacacaggtgatggtgaaacattcgaaggtggttatgattatcctgattacaactatgat 104044
Query: 2187 ggctatgctgatgg 2200
||||||| ||||||
Sbjct: 104045 ggctatggtgatgg 104058
Score = 71.9 bits (36), Expect = 1e-08
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 593 agagacgagatttggcagattgtcaccagcttacatgttggtggtggagatactat 648
||||| |||||| |||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 95926 agagaggagattaggcagattgtcagcagcttacatgtggctggtggagatactat 95981
Score = 71.9 bits (36), Expect = 1e-08
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 758 ggcaaagtaaaaaggcttatcttcttatcgatttctcggactatttgaagat 809
|||||||||||||||| ||||||||||| |||||||||||| ||||| ||||
Sbjct: 97045 ggcaaagtaaaaaggcatatcttcttattgatttctcggaccatttgcagat 97096
Score = 54.0 bits (27), Expect = 0.003
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1727 aggaacaagccgcaaaggaagctttagcagctgaattggcagctagaggtgtgggcgtgg 1786
|||||||||| ||||| | ||| ||||||||||| ||||||||||||| |||| ||||
Sbjct: 102107 aggaacaagcagcaaaagcagcattagcagctgagctggcagctagaggagtggttgtgg 102166
Query: 1787 gagaggg 1793
||||||
Sbjct: 102167 aagaggg 102173
Score = 46.1 bits (23), Expect = 0.62
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 1587 aggtgaaaatggtaaagctgatgctgatccagaaagtttttctgatattgatgatgtgga 1646
|||| |||||| |||||| |||| | ||| |||||| | |||||||||||||||| |||
Sbjct: 101756 aggtaaaaatgataaagcagatgaaggtcctgaaagtctctctgatattgatgatgcgga 101815
Query: 1647 ggt 1649
|||
Sbjct: 101816 ggt 101818
>dbj|AP008211.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
Length = 29737217
Score = 157 bits (79), Expect = 2e-34
Identities = 106/115 (92%)
Strand = Plus / Plus
Query: 816 ttatgtcctaggtgctgtttttctgcaactttgccaagttttgctacttgcagaacatcc 875
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 13641266 ttatgtcctaggtgctgtttttctgcagctttgccaagttttgctacttgcggaacatcc 13641325
Query: 876 aattgttcagaaactcatagaccccagccttttcatccatcgttttacagaacgt 930
| || | || || ||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 13641326 agttatccaaaagctcatcgaccccagccttttcatacatcgttttacagaacgt 13641380
Score = 121 bits (61), Expect = 1e-23
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 1096 gttgcggttgtgcatgtatgtgaggcaacactaactaagcgcttgatagagtttgaaaat 1155
||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 13642603 gttgctgttgtgcatgtttgcgaggcaacactaactaagcgcttgatagagtttgaaaat 13642662
Query: 1156 acagattctggcagcttaacg 1176
|||||||| || |||||||||
Sbjct: 13642663 acagattcgggtagcttaacg 13642683
Score = 113 bits (57), Expect = 3e-21
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 679 tagctagctgtggaccataattttacaaggggccgtcgaacaactcatgttgcagcagct 738
||||||||||| ||| | ||||||||||||||||||||||||||||||||||| || |||
Sbjct: 13640291 tagctagctgttgacaagaattttacaaggggccgtcgaacaactcatgttgctgctgct 13640350
Query: 739 tgcctttacattgcctgccgg 759
|||||||| ||||||||||||
Sbjct: 13640351 tgcctttatattgcctgccgg 13640371
Score = 103 bits (52), Expect = 3e-18
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1321 aaactgtcgggtggactggagggtggtgctgaccctccagctttccaacgagctgaaaaa 1380
|||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 13643968 aaactgtctggtggactggagggtggctctgatcctccagctttccaacgagctgaaaaa 13644027
Query: 1381 caaagactggaagctgctaa 1400
||||| |||| ||||||||
Sbjct: 13644028 caaaggttggaggctgctaa 13644047
Score = 99.6 bits (50), Expect = 5e-17
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 1004 tgcagactgggaggaagccaagtggattatgtggtgcagcattatatattgctgcacttt 1063
|||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||| || |
Sbjct: 13642326 tgcagactgggaggaaaccaagtggattgtgtggtgcagcactatatatcgctgctctct 13642385
Query: 1064 cacatggctataattataccaagtcaaatattgt 1097
| ||||| ||| ||||||||||| || |||||||
Sbjct: 13642386 ctcatggatatgattataccaaggcagatattgt 13642419
Score = 99.6 bits (50), Expect = 5e-17
Identities = 120/142 (84%), Gaps = 6/142 (4%)
Strand = Plus / Plus
Query: 1176 gattgaagattttttggcaaaggctgatgaaga---gcctgtttcaatattttcacccat 1232
||||||||| ||||||||||||||||||||| | || |||| | | | ||||||| |
Sbjct: 13643747 gattgaagaatttttggcaaaggctgatgaacaagtgcttgttactaaaatttcaccaaa 13643806
Query: 1233 acctggagaagtcctctgcaagcacaaggataaagctgctgagcattttgctcatggact 1292
|||||||||| || |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 13643807 gtctggagaagtactttgcaagcacaaggataaagctg---agcattttgctcatggact 13643863
Query: 1293 ttgtgagaagtgctacaacaaa 1314
||||| || ||||||||||||
Sbjct: 13643864 ctgtgaaaaatgctacaacaaa 13643885
Score = 95.6 bits (48), Expect = 7e-16
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 929 gtttacttgggaaaagggacaatgctgtctcagacacagctttacgcatcgtagctagca 988
||||||| ||||| ||||||||||| || ||||| || ||||||||||| ||||||||||
Sbjct: 13642181 gtttactggggaagagggacaatgccgtatcagatacggctttacgcattgtagctagca 13642240
Query: 989 tgaaacgagactggatgcag 1008
|||| |||||||||||||||
Sbjct: 13642241 tgaagcgagactggatgcag 13642260
Score = 95.6 bits (48), Expect = 7e-16
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 1646 aggttgacgggtatcttcacaatgaggaagagacacagtacaaaaagataatttgggagg 1705
||||||| ||||| |||||||| |||||||| |||||||||||||| || || |||||||
Sbjct: 13646037 aggttgatgggtaccttcacaacgaggaagaaacacagtacaaaaaaattatctgggagg 13646096
Query: 1706 aaatgaacaaagaataccttgagg 1729
||||||| ||||| ||||||||||
Sbjct: 13646097 aaatgaataaagagtaccttgagg 13646120
Score = 75.8 bits (38), Expect = 7e-10
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 2127 gacactggtgatggtgaaacattagaaggtggctatgactatgctgattacaataacgat 2186
||||| ||||||||||||||||| |||||||| ||||| ||| |||||||||| | |||
Sbjct: 13648077 gacacaggtgatggtgaaacattcgaaggtggttatgattatcctgattacaactatgat 13648136
Query: 2187 ggctatgctgatgg 2200
||||||| ||||||
Sbjct: 13648137 ggctatggtgatgg 13648150
Score = 71.9 bits (36), Expect = 1e-08
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 593 agagacgagatttggcagattgtcaccagcttacatgttggtggtggagatactat 648
||||| |||||| |||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 13640018 agagaggagattaggcagattgtcagcagcttacatgtggctggtggagatactat 13640073
Score = 71.9 bits (36), Expect = 1e-08
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 758 ggcaaagtaaaaaggcttatcttcttatcgatttctcggactatttgaagat 809
|||||||||||||||| ||||||||||| |||||||||||| ||||| ||||
Sbjct: 13641137 ggcaaagtaaaaaggcatatcttcttattgatttctcggaccatttgcagat 13641188
Score = 54.0 bits (27), Expect = 0.003
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1727 aggaacaagccgcaaaggaagctttagcagctgaattggcagctagaggtgtgggcgtgg 1786
|||||||||| ||||| | ||| ||||||||||| ||||||||||||| |||| ||||
Sbjct: 13646199 aggaacaagcagcaaaagcagcattagcagctgagctggcagctagaggagtggttgtgg 13646258
Query: 1787 gagaggg 1793
||||||
Sbjct: 13646259 aagaggg 13646265
Score = 46.1 bits (23), Expect = 0.62
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 1587 aggtgaaaatggtaaagctgatgctgatccagaaagtttttctgatattgatgatgtgga 1646
|||| |||||| |||||| |||| | ||| |||||| | |||||||||||||||| |||
Sbjct: 13645848 aggtaaaaatgataaagcagatgaaggtcctgaaagtctctctgatattgatgatgcgga 13645907
Query: 1647 ggt 1649
|||
Sbjct: 13645908 ggt 13645910
>emb|Z84484.1 |HS50J22 Human DNA sequence from clone RP1-50J22 on chromosome 6p21 Contains the
gene for a novel protein similar to GS2, transport
secretion protein 2.1 and 2.2 (TTS-2.1, TTS-2.2) and mouse
adiponutrin (Adpn), the gene for ETS transcription factor
TEL-2a (TEL-2), three novel genes and a CpG island,
complete sequence
Length = 146746
Score = 42.1 bits (21), Expect = 9.7
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1694 taatttgggaggaaatgaaca 1714
|||||||||||||||||||||
Sbjct: 58675 taatttgggaggaaatgaaca 58655
>emb|BX571818.3 | Human DNA sequence from clone RP11-38J22 on chromosome 1 Contains a novel
gene, a ribosomal protein L22 (RPL22) pseudogene, a novel
gene, the AVPR1B gene for arginine vasopressin receptor 1B,
two novel genes, the CTSE gene for cathepsin E and two CpG
islands, complete sequence
Length = 170924
Score = 42.1 bits (21), Expect = 9.7
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1373 ctgaaaaacaaagactggaag 1393
|||||||||||||||||||||
Sbjct: 112935 ctgaaaaacaaagactggaag 112955
>dbj|AP001046.1 | Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171
region, complete sequence
Length = 158063
Score = 42.1 bits (21), Expect = 9.7
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2191 atgctgatggtggtgatgctg 2211
|||||||||||||||||||||
Sbjct: 68900 atgctgatggtggtgatgctg 68880
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 489,384,116
Number of extensions: 25993453
Number of successful extensions: 151812
Number of sequences better than 10.0: 80
Number of HSP's gapped: 151806
Number of HSP's successfully gapped: 142
Length of query: 2522
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2499
Effective length of database: 18,503,978,556
Effective search space: 46241442411444
Effective search space used: 46241442411444
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)