ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf103n03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9CWP6:MSPD2_MOUSE Motile sperm domain-containing protein 2 - Mu... 48 9e-05
2Q757H2:CSR1_ASHGO Phosphatidylinositol transfer protein CSR1 - A... 44 0.001
3Q06705:CSR1_YEAST Phosphatidylinositol transfer protein CSR1 - S... 35 0.61
4Q67N41:GLYA_SYMTH Serine hydroxymethyltransferase - Symbiobacter... 34 1.4
5Q10138:YAS2_SCHPO Uncharacterized protein C3H8.02 - Schizosaccha... 33 2.3
6O43031:SPP2_SCHPO Pre-mRNA-splicing factor spp2 - Schizosaccharo... 31 8.9
7Q8Z2Z9:GLYA2_SALTI Serine hydroxymethyltransferase 2 - Salmonell... 31 8.9

>Q9CWP6:MSPD2_MOUSE Motile sperm domain-containing protein 2 - Mus musculus (Mouse)|
          Length = 518
 Score = 47.8 bits (112), Expect = 9e-05
 Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = +1

Query: 874  KWRQDFHVSELSEESV-KGLYQTGKAYVHDSFDINGRPVLIVVAAKHFPSKQDPLENEKL 1050
            +WR++F V++LSE S+ + L + G  Y+H  +D  G  +  +    H   ++  ++ +KL
Sbjct: 70   QWRKEFSVNDLSESSIPRWLLELGGIYLH-GYDKEGNKLFWIRVKYHIKDQKTIMDKKKL 128

Query: 1051 CAFLVEKALRKLPTGTDNILGIFDLRGFGVENGDLQFLKFL 1173
             AF +E+  ++       I  +FD+   G+ + D+ F++F+
Sbjct: 129  IAFWLERYAKR--ENGKPITVMFDMSETGLNSIDMDFVRFI 167



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>Q757H2:CSR1_ASHGO Phosphatidylinositol transfer protein CSR1 - Ashbya gossypii (Yeast)|
            (Eremothecium gossypii)
          Length = 436

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 28/80 (35%), Positives = 39/80 (48%)
 Frame = +1

Query: 934  QTGKAYVHDSFDINGRPVLIVVAAKHFPSKQDPLENEKLCAFLVEKALRKLPTGTDNILG 1113
            + GKA V   FD NG P++ V    H  + Q   E  +   F++E+A   L    D    
Sbjct: 196  ELGKATVR-GFDKNGCPIVYVRPRLHHAADQTEAETSEYSLFIIEQARLFLKEPCDTATI 254

Query: 1114 IFDLRGFGVENGDLQFLKFL 1173
            +FDL GF + N D   +KFL
Sbjct: 255  LFDLSGFSMANMDYAPVKFL 274



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>Q06705:CSR1_YEAST Phosphatidylinositol transfer protein CSR1 - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 408

 Score = 35.0 bits (79), Expect = 0.61
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
 Frame = +1

Query: 895  VSELSEESVKGLYQTGKAYVHDSFDINGRPVLIVVAAKHFPSKQDPLENEKLCAFLVEKA 1074
            V E +E  V    +  KA +   +D + RPV++V    H  S Q   E EK    ++E++
Sbjct: 152  VYENNETGVIKNLELQKATIQ-GYDNDMRPVILVRPRLHHSSDQTEQELEKFSLLVIEQS 210

Query: 1075 L----RKLPTGTDNILGIFDLRGFGVENGDLQFLKFL 1173
                    P  T  +   FDL GF + N D   +KFL
Sbjct: 211  KLFFKENYPASTTIL---FDLNGFSMSNMDYAPVKFL 244



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>Q67N41:GLYA_SYMTH Serine hydroxymethyltransferase - Symbiobacterium thermophilum|
          Length = 412

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 12/77 (15%)
 Frame = +1

Query: 970  INGRPVLIVVAAKHFPSKQ--DP---------LENEK-LCAFLVEKALRKLPTGTDNILG 1113
            + G P++ ++AAK    KQ  DP         ++N K L   L+E+  R +  GTDN L 
Sbjct: 254  MQGGPLMHIIAAKAVAFKQLSDPDYRAYCGQVVKNAKALAQALLERGYRLVTGGTDNHLM 313

Query: 1114 IFDLRGFGVENGDLQFL 1164
            + DLR  G+   D + L
Sbjct: 314  LVDLRPKGITGRDAEHL 330



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>Q10138:YAS2_SCHPO Uncharacterized protein C3H8.02 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 444

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 22/78 (28%), Positives = 35/78 (44%)
 Frame = +1

Query: 940  GKAYVHDSFDINGRPVLIVVAAKHFPSKQDPLENEKLCAFLVEKALRKLPTGTDNILGIF 1119
            GK ++    D + RPV  + A  H      P   E+L  +++E A   L    +    +F
Sbjct: 181  GKCFIFGE-DKHNRPVCYIRARLHKVGDVSPESVERLTVWVMETARLILKPPIETATVVF 239

Query: 1120 DLRGFGVENGDLQFLKFL 1173
            D+  F + N D   LKF+
Sbjct: 240  DMTDFSMSNMDYGPLKFM 257



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>O43031:SPP2_SCHPO Pre-mRNA-splicing factor spp2 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 381

 Score = 31.2 bits (69), Expect = 8.9
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +1

Query: 895  VSELSEESVKGLYQTGKAYVHDSFDINGRPVLIVVAAKHFPSKQDPLE---NEKLCAFLV 1065
            V E     ++G+   G+    D+FD+N RP  + + AK   S+   L+   N K   FL 
Sbjct: 193  VEEFGAAMLRGMGWNGQLSSKDAFDVNQRPTFLGMGAKPVDSELTELDIWKNPKKTMFLP 252

Query: 1066 EKAL 1077
             K L
Sbjct: 253  VKPL 256



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>Q8Z2Z9:GLYA2_SALTI Serine hydroxymethyltransferase 2 - Salmonella typhi|
          Length = 419

 Score = 31.2 bits (69), Expect = 8.9
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
 Frame = +1

Query: 970  INGRPVLIVVAAKHFPSKQ-----------DPLEN-EKLCAFLVEKALRKLPTGTDNILG 1113
            + G P++ V+AAK     +             +EN + +C  L ++ L  L  GTD  LG
Sbjct: 258  LQGGPLMHVIAAKAVALGEALQPEFKRYAGQVIENAQAMCQQLAQRGLTLLTGGTDCHLG 317

Query: 1114 IFDLRGFGVENGDLQF 1161
            I DLR  G+    +++
Sbjct: 318  IIDLRPQGLTGAQVEY 333


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 179,259,518
Number of extensions: 3531190
Number of successful extensions: 8560
Number of sequences better than 10.0: 7
Number of HSP's gapped: 8559
Number of HSP's successfully gapped: 7
Length of query: 397
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 282
Effective length of database: 69,142,514
Effective search space: 19498188948
Effective search space used: 19498188948
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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