| Clone Name | FLbaf103n03 |
|---|---|
| Clone Library Name | barley_pub |
>Q9CWP6:MSPD2_MOUSE Motile sperm domain-containing protein 2 - Mus musculus (Mouse)| Length = 518 Score = 47.8 bits (112), Expect = 9e-05 Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Frame = +1 Query: 874 KWRQDFHVSELSEESV-KGLYQTGKAYVHDSFDINGRPVLIVVAAKHFPSKQDPLENEKL 1050 +WR++F V++LSE S+ + L + G Y+H +D G + + H ++ ++ +KL Sbjct: 70 QWRKEFSVNDLSESSIPRWLLELGGIYLH-GYDKEGNKLFWIRVKYHIKDQKTIMDKKKL 128 Query: 1051 CAFLVEKALRKLPTGTDNILGIFDLRGFGVENGDLQFLKFL 1173 AF +E+ ++ I +FD+ G+ + D+ F++F+ Sbjct: 129 IAFWLERYAKR--ENGKPITVMFDMSETGLNSIDMDFVRFI 167
>Q757H2:CSR1_ASHGO Phosphatidylinositol transfer protein CSR1 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 436 Score = 44.3 bits (103), Expect = 0.001 Identities = 28/80 (35%), Positives = 39/80 (48%) Frame = +1 Query: 934 QTGKAYVHDSFDINGRPVLIVVAAKHFPSKQDPLENEKLCAFLVEKALRKLPTGTDNILG 1113 + GKA V FD NG P++ V H + Q E + F++E+A L D Sbjct: 196 ELGKATVR-GFDKNGCPIVYVRPRLHHAADQTEAETSEYSLFIIEQARLFLKEPCDTATI 254 Query: 1114 IFDLRGFGVENGDLQFLKFL 1173 +FDL GF + N D +KFL Sbjct: 255 LFDLSGFSMANMDYAPVKFL 274
>Q06705:CSR1_YEAST Phosphatidylinositol transfer protein CSR1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 408 Score = 35.0 bits (79), Expect = 0.61 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Frame = +1 Query: 895 VSELSEESVKGLYQTGKAYVHDSFDINGRPVLIVVAAKHFPSKQDPLENEKLCAFLVEKA 1074 V E +E V + KA + +D + RPV++V H S Q E EK ++E++ Sbjct: 152 VYENNETGVIKNLELQKATIQ-GYDNDMRPVILVRPRLHHSSDQTEQELEKFSLLVIEQS 210 Query: 1075 L----RKLPTGTDNILGIFDLRGFGVENGDLQFLKFL 1173 P T + FDL GF + N D +KFL Sbjct: 211 KLFFKENYPASTTIL---FDLNGFSMSNMDYAPVKFL 244
>Q67N41:GLYA_SYMTH Serine hydroxymethyltransferase - Symbiobacterium thermophilum| Length = 412 Score = 33.9 bits (76), Expect = 1.4 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 12/77 (15%) Frame = +1 Query: 970 INGRPVLIVVAAKHFPSKQ--DP---------LENEK-LCAFLVEKALRKLPTGTDNILG 1113 + G P++ ++AAK KQ DP ++N K L L+E+ R + GTDN L Sbjct: 254 MQGGPLMHIIAAKAVAFKQLSDPDYRAYCGQVVKNAKALAQALLERGYRLVTGGTDNHLM 313 Query: 1114 IFDLRGFGVENGDLQFL 1164 + DLR G+ D + L Sbjct: 314 LVDLRPKGITGRDAEHL 330
>Q10138:YAS2_SCHPO Uncharacterized protein C3H8.02 - Schizosaccharomyces pombe (Fission| yeast) Length = 444 Score = 33.1 bits (74), Expect = 2.3 Identities = 22/78 (28%), Positives = 35/78 (44%) Frame = +1 Query: 940 GKAYVHDSFDINGRPVLIVVAAKHFPSKQDPLENEKLCAFLVEKALRKLPTGTDNILGIF 1119 GK ++ D + RPV + A H P E+L +++E A L + +F Sbjct: 181 GKCFIFGE-DKHNRPVCYIRARLHKVGDVSPESVERLTVWVMETARLILKPPIETATVVF 239 Query: 1120 DLRGFGVENGDLQFLKFL 1173 D+ F + N D LKF+ Sbjct: 240 DMTDFSMSNMDYGPLKFM 257
>O43031:SPP2_SCHPO Pre-mRNA-splicing factor spp2 - Schizosaccharomyces pombe (Fission| yeast) Length = 381 Score = 31.2 bits (69), Expect = 8.9 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +1 Query: 895 VSELSEESVKGLYQTGKAYVHDSFDINGRPVLIVVAAKHFPSKQDPLE---NEKLCAFLV 1065 V E ++G+ G+ D+FD+N RP + + AK S+ L+ N K FL Sbjct: 193 VEEFGAAMLRGMGWNGQLSSKDAFDVNQRPTFLGMGAKPVDSELTELDIWKNPKKTMFLP 252 Query: 1066 EKAL 1077 K L Sbjct: 253 VKPL 256
>Q8Z2Z9:GLYA2_SALTI Serine hydroxymethyltransferase 2 - Salmonella typhi| Length = 419 Score = 31.2 bits (69), Expect = 8.9 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 12/76 (15%) Frame = +1 Query: 970 INGRPVLIVVAAKHFPSKQ-----------DPLEN-EKLCAFLVEKALRKLPTGTDNILG 1113 + G P++ V+AAK + +EN + +C L ++ L L GTD LG Sbjct: 258 LQGGPLMHVIAAKAVALGEALQPEFKRYAGQVIENAQAMCQQLAQRGLTLLTGGTDCHLG 317 Query: 1114 IFDLRGFGVENGDLQF 1161 I DLR G+ +++ Sbjct: 318 IIDLRPQGLTGAQVEY 333 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 179,259,518 Number of extensions: 3531190 Number of successful extensions: 8560 Number of sequences better than 10.0: 7 Number of HSP's gapped: 8559 Number of HSP's successfully gapped: 7 Length of query: 397 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 282 Effective length of database: 69,142,514 Effective search space: 19498188948 Effective search space used: 19498188948 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)